Rorug07G0183900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000090
Physical Location & Seq
Reverse (-)
15359909 .. 15361415
1507 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0183900.1

Sequence Viewer

Length: 927 bp
ATGGACACCCATTCTCTTCCCCCTCCTTTCCACACTAGAGATTTCCAACTCCATCACCAGCAGCAGCATCAGCACCAGCACCACCAGTTCCATCACCAGCAGCAGAACTCCGAAGACGAGCAAACCGGAAGCAGCGGCCTGAACAAGGGAACCAAAAGAGAGCGAGATATCGACAGCAACAACGACAGTGGAAATGGTGGTGAAGGCAGCAAAGAGCTGAACATCACTGTTTCCGGGGATGGATCGGAAATGACAAGAAGACCTAGAGGCAGGCCCGCCGGATCCAAAAACAAGCCGAAGCCGCCCATCATCATTACTCGAGATAGTGCTAATGCTCTCCGCACCCATGTCATGGAAATCGCCGATGGGTGCGATATAGTGGAGAGTGTTGCCACCTTTGCTCGCAGGCGCCAGAGAGGCGTCTGCATTATGAGCGGCACAGGGACGGTTACCAACGTGACCCTCAGGCAACCAGCGTCCCCGGGCTCGGTCGTGACTTTACACGGCCGATTTGAGATCTTGTCACTAGCTGGGTCCTTCCTACCACCTCCAGCCCCACCTGCCGCGACTGGGTTGACCATTTATCTGGCAGGCGGGCAAGGACAGGTGGTAGGAGGGAGTGTTGTTGGGACTCTTTTGGCTTCGGGTCCGGTGGTGATCATGGCTGCCTCGTTTAGCAACGCCGCCTACGAGCGGCTTCCACTGGAGGAGGACGAGGGTGCGATGCCAATGCCGGGAGGGAGTATGGGGTCTCCAACCGCGGTTGGTCAACAGCAGCACCAGCAGCAACAGCAGCAACAACAGCTTTTGGCCGAAGCTGCTAATACGAATGCGCCTCTTTTTCATGGGTTACCTCCCAATCTCCTAAACTCCATGCAATTGCCGGCTGAAGCGGCATACTGGGCTACTGGCCGCCCTCCATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

308

Amino Acids

32.88

Weight (kDa)

6.53

Isoelectric Point (pI)

54.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PCC PF03479 114 - 226 4.5e-25 Plants and Prokaryotes Conserved (PCC) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 568
Acc36I ACCTGC 1 cut(s) 568
AccB1I GGYRCC 1 cut(s) 408
AccB7I CCANNNNNTGG 1 cut(s) 352
AccBSI CCGCTC 2 cut(s) 435, 694
AccII CGCG 2 cut(s) 566, 761
AclWI GGATC 3 cut(s) 250, 276, 289
AcoI YGGCCR 3 cut(s) 505, 810, 910
AcuI CTGAAG 1 cut(s) 909
AcyI GRCGYC 2 cut(s) 409, 420
AfiI CCNNNNNNNGG 6 cut(s) 145, 352, 487, 570, 693, 734
AluBI AGCT 4 cut(s) 217, 530, 805, 818
AluI AGCT 4 cut(s) 217, 530, 805, 818
Alw26I GTCTC 1 cut(s) 756
AlwI GGATC 3 cut(s) 250, 276, 289
Ama87I CYCGRG 2 cut(s) 318, 481
AoxI GGCC 5 cut(s) 136, 272, 505, 810, 910
AspLEI GCGC 2 cut(s) 411, 835
AspS9I GGNCC 3 cut(s) 273, 534, 647
AsuC2I CCSGG 4 cut(s) 235, 482, 483, 735
AsuHPI GGTGA 4 cut(s) 47, 86, 212, 667
AvaI CYCGRG 2 cut(s) 318, 481
AvaII GGWCC 2 cut(s) 534, 647
AxyI CCTNAGG 1 cut(s) 464
BamHI GGATCC 1 cut(s) 281
BanI GGYRCC 1 cut(s) 408
BanII GRGCYC 1 cut(s) 488
BbsI GAAGAC 2 cut(s) 120, 265
BccI CCATC 5 cut(s) 60, 99, 233, 314, 359
BceAI ACGGC 1 cut(s) 520
BcgI CGANNNNNNTGC 2 cut(s) 712, 746
BclI TGATCA 1 cut(s) 657
BcnI CCSGG 4 cut(s) 235, 482, 483, 735
BcoDI GTCTC 1 cut(s) 756
BfaI CTAG 3 cut(s) 36, 264, 527
BfoI RGCGCY 1 cut(s) 412
BfuAI ACCTGC 1 cut(s) 568
BglI GCCNNNNNGGC 1 cut(s) 417
BglII AGATCT 1 cut(s) 516
Bme1390I CCNGG 4 cut(s) 235, 482, 483, 735
Bme18I GGWCC 2 cut(s) 534, 647
BmeT110I CYCGRG 2 cut(s) 318, 481
BmgT120I GGNCC 3 cut(s) 273, 534, 647
BmiI GGNNCC 5 cut(s) 151, 283, 410, 535, 648
BmrFI CCNGG 4 cut(s) 235, 482, 483, 735
BmrI ACTGGG 2 cut(s) 579, 910
BmsI GCATC 2 cut(s) 76, 714
BmuI ACTGGG 2 cut(s) 579, 910
BpiI GAAGAC 2 cut(s) 120, 265
BpmI CTGGAG 2 cut(s) 534, 725
BpuMI CCSGG 4 cut(s) 235, 482, 483, 735
BsaHI GRCGYC 2 cut(s) 409, 420
BsaI GGTCTC 1 cut(s) 756
BsaJI CCNNGG 4 cut(s) 234, 480, 481, 759
BsaWI WCCGGW 2 cut(s) 125, 649
BsaXI ACNNNNNCTCC 2 cut(s) 606, 636
Bsc4I CCNNNNNNNGG 6 cut(s) 145, 352, 487, 570, 693, 734
Bse118I RCCGGY 1 cut(s) 883
Bse1I ACTGG 5 cut(s) 85, 574, 708, 905, 913
Bse21I CCTNAGG 1 cut(s) 464
BseDI CCNNGG 4 cut(s) 234, 480, 481, 759
BseGI GGATG 1 cut(s) 244
BseLI CCNNNNNNNGG 6 cut(s) 145, 352, 487, 570, 693, 734
BseMII CTCAG 1 cut(s) 478
BseNI ACTGG 5 cut(s) 85, 574, 708, 905, 913
BseRI GAGGAG 1 cut(s) 722
BseX3I CGGCCG 1 cut(s) 505
BseYI CCCAGC 1 cut(s) 530
Bsh1236I CGCG 2 cut(s) 566, 761
Bsh1285I CGRYCG 2 cut(s) 492, 508
BshFI GGCC 5 cut(s) 138, 274, 507, 812, 912
BshNI GGYRCC 1 cut(s) 408
BsiEI CGRYCG 2 cut(s) 492, 508
BsiHKCI CYCGRG 2 cut(s) 318, 481
BsiSI CCGG 7 cut(s) 126, 234, 279, 482, 650, 734, 884
BslFI GGGAC 3 cut(s) 457, 463, 643
BslI CCNNNNNNNGG 6 cut(s) 145, 352, 487, 570, 693, 734
BsmAI GTCTC 1 cut(s) 756
BsmFI GGGAC 3 cut(s) 457, 463, 643
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 5 cut(s) 138, 274, 507, 812, 912
Bso31I GGTCTC 1 cut(s) 756
BsoBI CYCGRG 2 cut(s) 318, 481
Bsp1286I GDGCHC 1 cut(s) 488
Bsp143I GATC 4 cut(s) 242, 281, 516, 657
BspANI GGCC 5 cut(s) 138, 274, 507, 812, 912
BspCNI CTCAG 1 cut(s) 477
BspFNI CGCG 2 cut(s) 566, 761
BspLI GGNNCC 5 cut(s) 151, 283, 410, 535, 648
BspMI ACCTGC 1 cut(s) 568
BspPI GGATC 3 cut(s) 250, 276, 289
BspT107I GGYRCC 1 cut(s) 408
BspTNI GGTCTC 1 cut(s) 756
BsrBI CCGCTC 2 cut(s) 435, 694
BsrFI RCCGGY 1 cut(s) 883
BsrI ACTGG 5 cut(s) 85, 574, 708, 905, 913
BssAI RCCGGY 1 cut(s) 883
BssECI CCNNGG 4 cut(s) 234, 480, 481, 759
BssMI GATC 4 cut(s) 242, 281, 516, 657
BssNI GRCGYC 2 cut(s) 409, 420
Bst4CI ACNGT 3 cut(s) 188, 229, 448
Bst6I CTCTTC 1 cut(s) 21
BstACI GRCGYC 2 cut(s) 409, 420
BstC8I GCNNGC 7 cut(s) 272, 276, 403, 407, 592, 596, 885
BstDEI CTNAG 1 cut(s) 464
BstDSI CCRYGG 1 cut(s) 759
BstEII GGTNACC 2 cut(s) 448, 849
BstENI CCTNNNNNAGG 1 cut(s) 143
BstF5I GGATG 1 cut(s) 244
BstFNI CGCG 2 cut(s) 566, 761
BstH2I RGCGCY 1 cut(s) 412
BstHHI GCGC 2 cut(s) 411, 835
BstKTI GATC 4 cut(s) 245, 284, 519, 660
BstMAI GTCTC 1 cut(s) 756
BstMBI GATC 4 cut(s) 242, 281, 516, 657
BstMCI CGRYCG 2 cut(s) 492, 508
BstPI GGTNACC 2 cut(s) 448, 849
BstSCI CCNGG 4 cut(s) 233, 480, 481, 733
BstUI CGCG 2 cut(s) 566, 761
BstV2I GAAGAC 2 cut(s) 120, 265
BstX2I RGATCY 2 cut(s) 281, 516
BstXI CCANNNNNNTGG 1 cut(s) 586
BstYI RGATCY 2 cut(s) 281, 516
BstZI CGGCCG 1 cut(s) 505
Bsu36I CCTNAGG 1 cut(s) 464
BsuRI GGCC 5 cut(s) 138, 274, 507, 812, 912
BtgI CCRYGG 1 cut(s) 759
BtgZI GCGATG 1 cut(s) 737
BtsCI GGATG 1 cut(s) 244
BtsIMutI CAGTG 3 cut(s) 193, 225, 701
BveI ACCTGC 1 cut(s) 568
Cac8I GCNNGC 7 cut(s) 272, 276, 403, 407, 592, 596, 885
CfoI GCGC 2 cut(s) 411, 835
Cfr10I RCCGGY 1 cut(s) 883
Cfr13I GGNCC 3 cut(s) 273, 534, 647
Cfr42I CCGCGG 1 cut(s) 762
Cfr9I CCCGGG 1 cut(s) 481
CseI GACGC 2 cut(s) 409, 465
CspCI CAANNNNNGTGG 2 cut(s) 169, 204
CviAII CATG 5 cut(s) 347, 352, 661, 845, 874
DdeI CTNAG 1 cut(s) 464
DinI GGCGCC 1 cut(s) 410
DpnI GATC 4 cut(s) 244, 283, 518, 659
DpnII GATC 4 cut(s) 242, 281, 516, 657
EaeI YGGCCR 3 cut(s) 505, 810, 910
EagI CGGCCG 1 cut(s) 505
Eam1104I CTCTTC 1 cut(s) 21
EarI CTCTTC 1 cut(s) 21
EclXI CGGCCG 1 cut(s) 505
Eco24I GRGCYC 1 cut(s) 488
Eco31I GGTCTC 1 cut(s) 756
Eco32I GATATC 1 cut(s) 169
Eco47I GGWCC 2 cut(s) 534, 647
Eco52I CGGCCG 1 cut(s) 505
Eco57I CTGAAG 1 cut(s) 909
Eco81I CCTNAGG 1 cut(s) 464
Eco88I CYCGRG 2 cut(s) 318, 481
Eco91I GGTNACC 2 cut(s) 448, 849
EcoNI CCTNNNNNAGG 1 cut(s) 143
EcoO109I RGGNCCY 1 cut(s) 534
EcoO65I GGTNACC 2 cut(s) 448, 849
EcoRV GATATC 1 cut(s) 169
EcoT38I GRGCYC 1 cut(s) 488
EgeI GGCGCC 1 cut(s) 410
EheI GGCGCC 1 cut(s) 410
FaeI CATG 5 cut(s) 350, 355, 664, 848, 877
FaiI YATR 9 cut(s) 348, 353, 377, 431, 662, 746, 846, 875, 898
FaqI GGGAC 3 cut(s) 457, 463, 643
FatI CATG 5 cut(s) 346, 351, 660, 844, 873
FauI CCCGC 2 cut(s) 283, 587
FbaI TGATCA 1 cut(s) 657
FokI GGATG 1 cut(s) 251
FriOI GRGCYC 1 cut(s) 488
FspBI CTAG 3 cut(s) 36, 264, 527
GlaI GCGC 2 cut(s) 410, 834
GsaI CCCAGC 1 cut(s) 534
GsuI CTGGAG 2 cut(s) 534, 725
HaeII RGCGCY 1 cut(s) 412
HaeIII GGCC 5 cut(s) 138, 274, 507, 812, 912
HapII CCGG 7 cut(s) 126, 234, 279, 482, 650, 734, 884
HgaI GACGC 2 cut(s) 409, 465
HhaI GCGC 2 cut(s) 411, 835
Hin1I GRCGYC 2 cut(s) 409, 420
Hin1II CATG 5 cut(s) 350, 355, 664, 848, 877
Hin6I GCGC 2 cut(s) 409, 833
HinP1I GCGC 2 cut(s) 409, 833
HincII GTYRAC 2 cut(s) 576, 770
HindII GTYRAC 2 cut(s) 576, 770
HinfI GANTC 1 cut(s) 631
HpaII CCGG 7 cut(s) 126, 234, 279, 482, 650, 734, 884
HphI GGTGA 4 cut(s) 47, 86, 212, 667
Hpy166II GTNNAC 2 cut(s) 576, 770
Hpy188I TCNGA 2 cut(s) 112, 247
Hpy188III TCNNGA 2 cut(s) 320, 493
Hpy8I GTNNAC 2 cut(s) 576, 770
HpyAV CCTTC 2 cut(s) 197, 547
HpyCH4III ACNGT 3 cut(s) 188, 229, 448
HpyCH4IV ACGT 1 cut(s) 456
HpyCH4V TGCA 2 cut(s) 426, 877
HpyF3I CTNAG 1 cut(s) 464
HpySE526I ACGT 1 cut(s) 456
Hsp92I GRCGYC 2 cut(s) 409, 420
Hsp92II CATG 5 cut(s) 350, 355, 664, 848, 877
HspAI GCGC 2 cut(s) 409, 833
KasI GGCGCC 1 cut(s) 408
KroI GCCGGC 1 cut(s) 883
KroNI GCCGGC 1 cut(s) 885
Ksp22I TGATCA 1 cut(s) 657
KspI CCGCGG 1 cut(s) 762
Kzo9I GATC 4 cut(s) 242, 281, 516, 657
LweI GCATC 2 cut(s) 76, 714
MaeI CTAG 3 cut(s) 36, 264, 527
MaeII ACGT 1 cut(s) 456
MaeIII GTNAC 5 cut(s) 448, 457, 493, 522, 849
MalI GATC 4 cut(s) 244, 283, 518, 659
MbiI CCGCTC 2 cut(s) 435, 694
MboI GATC 4 cut(s) 242, 281, 516, 657
MboII GAAGA 3 cut(s) 8, 125, 270
MfeI CAATTG 1 cut(s) 878
MflI RGATCY 2 cut(s) 281, 516
MhlI GDGCHC 1 cut(s) 488
MluCI AATT 1 cut(s) 878
Mly113I GGCGCC 1 cut(s) 409
MlyI GAGTC 1 cut(s) 625
MmeI TCCRAC 2 cut(s) 70, 779
MroNI GCCGGC 1 cut(s) 883
MspA1I CMGCKG 2 cut(s) 135, 761
MspI CCGG 7 cut(s) 126, 234, 279, 482, 650, 734, 884
MspR9I CCNGG 4 cut(s) 235, 482, 483, 735
MunI CAATTG 1 cut(s) 878
Mva1269I GAATGC 1 cut(s) 835
MvnI CGCG 2 cut(s) 566, 761
NaeI GCCGGC 1 cut(s) 885
NarI GGCGCC 1 cut(s) 409
NciI CCSGG 4 cut(s) 235, 482, 483, 735
NdeII GATC 4 cut(s) 242, 281, 516, 657
NgoMIV GCCGGC 1 cut(s) 883
NlaIII CATG 5 cut(s) 350, 355, 664, 848, 877
NlaIV GGNNCC 5 cut(s) 151, 283, 410, 535, 648
NmuCI GTSAC 3 cut(s) 457, 493, 522
PaeR7I CTCGAG 1 cut(s) 318
PaqCI CACCTGC 1 cut(s) 568
PcsI WCGNNNNNNNCGW 1 cut(s) 687
PctI GAATGC 1 cut(s) 835
PdiI GCCGGC 1 cut(s) 885
PflMI CCANNNNNTGG 1 cut(s) 352
PleI GAGTC 1 cut(s) 625
PluTI GGCGCC 1 cut(s) 412
PpsI GAGTC 1 cut(s) 625
PpuMI RGGWCCY 1 cut(s) 534
Psp5II RGGWCCY 1 cut(s) 534
PspEI GGTNACC 2 cut(s) 448, 849
PspFI CCCAGC 1 cut(s) 530
PspN4I GGNNCC 5 cut(s) 151, 283, 410, 535, 648
PspPI GGNCC 3 cut(s) 273, 534, 647
PspPPI RGGWCCY 1 cut(s) 534
PsuI RGATCY 2 cut(s) 281, 516
SacII CCGCGG 1 cut(s) 762
Sau3AI GATC 4 cut(s) 242, 281, 516, 657
Sau96I GGNCC 3 cut(s) 273, 534, 647
SchI GAGTC 1 cut(s) 625
ScrFI CCNGG 4 cut(s) 235, 482, 483, 735
SduI GDGCHC 1 cut(s) 488
SfaNI GCATC 2 cut(s) 76, 714
SfoI GGCGCC 1 cut(s) 410
Sfr274I CTCGAG 1 cut(s) 318
Sfr303I CCGCGG 1 cut(s) 762
SgrBI CCGCGG 1 cut(s) 762
SinI GGWCC 2 cut(s) 534, 647
SlaI CTCGAG 1 cut(s) 318
SmaI CCCGGG 1 cut(s) 483
SmlI CTYRAG 1 cut(s) 318
SmoI CTYRAG 1 cut(s) 318
Sse9I AATT 1 cut(s) 878
SspDI GGCGCC 1 cut(s) 408
SspMI CTAG 3 cut(s) 36, 264, 527
StyD4I CCNGG 4 cut(s) 233, 480, 481, 733
TaaI ACNGT 3 cut(s) 188, 229, 448
TaiI ACGT 1 cut(s) 459
TaqI TCGA 2 cut(s) 171, 319
TaqII GACCGA 1 cut(s) 478
TasI AATT 1 cut(s) 878
TauI GCSGC 8 cut(s) 138, 304, 438, 566, 686, 697, 896, 915
TscAI CASTG 3 cut(s) 193, 232, 708
TseFI GTSAC 3 cut(s) 457, 493, 522
Tsp45I GTSAC 3 cut(s) 457, 493, 522
TspDTI ATGAA 1 cut(s) 833
TspMI CCCGGG 1 cut(s) 481
TspRI CASTG 3 cut(s) 193, 232, 708
Van91I CCANNNNNTGG 1 cut(s) 352
VpaK11BI GGWCC 2 cut(s) 534, 647
XagI CCTNNNNNAGG 1 cut(s) 143
XhoI CTCGAG 1 cut(s) 318
XmaI CCCGGG 1 cut(s) 481
XspI CTAG 3 cut(s) 36, 264, 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.