RLG00000014764

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000090
Physical Location & Seq
Reverse (-)
57310922 .. 57313301
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014764

Sequence Viewer

Length: 1266 bp
ATGAAGAAAACTTATGGCAATATTTTACGGTTAGGAACTCATGCTGCAACCAATGCCACAAAGAAGAGAAATCAAATTCCAATGGATGATGAGCAATCCAATCTAAATGAGAACTGTCATGAACCTATCAAGAAGGCGCGTGGCATTACAAAGAATAAGTTGGGAACTCCTGCTGTGATCAATCCAAAACTGAAGCGAGTTCAAATCCCAATGGACAATGAGGAGTGTATTCCAAATGAGAATTCTAACCCTCCTTTAGATCCAGAACCTGTAAAGAAGACCCGTGGCATTACAGTAGGGTTGAAAGCTCATGCTATTGTTAGTGCGACCAAAAAGAGAATTCCAATCAAGATGGACAAGGATCAAAAGCTCCCTGAGACCGTTCAAGCCAATGCTATGTTTGTTAACGAGATTGGGTCATTCACGCGCAAATTAGCTCCACTCAAATTCAAATGGTGGAGAAAAGTACCTAAGGATGCCAAGAATGACATCAAAGAGGCTCTGACAACTAATTTTGAGTTTGATTGGACTGACCCGGAGCTGAGGATATTTGTGGAGAAGAAGATGGCCAAGGCATTTGGATCTTGGAGATCCAAGTTACATGGACATTTTAAAAAGTATGCTCATGATTTAGAATATGCTCGAGCACACCCACCCGGAGAAAAGCTCTTTGGTGAAAGATCAATAGATGAATGGGAGTGGCTTTGTGACGAGTTGTTCATAGATGAAACCTATGTGTTAATGCTACAAATCGAAATCAGAAAGAATAATCATTGTGGAGGTTCACGGCCTTACCAAAAACATATGGAAGCTGCACTTAAGAAAGGTAAAAATGTGTCTTTTGTTGAGAATTGGAGCAGTATGCATCAACATCGTGACGGTCAGTGGATCAACAAAGCAGCTGAACAAACTGGGAACAAAATGTTAGCAGAATTGAATCAGACAAAGGAGAAGTTAGCTGAAGTCCTTGGGGCTGCCTCACTTGATGAAATAGAAGTTCCCCGTCTCTATGCAGGTAGAGGCATTCGCGGTCTGGGCTATGGTCCACGGAAGGAACCCGTCCATTATTTTGAGAGTGATAAATCTGCAAATGCTTCCGTGACAGAACAAAAGGTGATTGAGCTGACAGCCACAGTGGAAAAGCTTTTGAGGCATATCAATCACATAGAAGATGATGATGATGATGATGATGATGATGATGATTATGATGATGGGGATGATGATGATGTGAATATCTATGGGGATGAAGATGAGGGTGCAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

422

Amino Acids

48.09

Weight (kDa)

5.93

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 255 - 326 8.3e-07 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1004
AccII CGCG 3 cut(s) 139, 427, 1029
AciI CCGC 1 cut(s) 1029
AclWI GGATC 5 cut(s) 254, 369, 585, 589, 896
AcoI YGGCCR 1 cut(s) 567
AcsI RAATTY 4 cut(s) 75, 241, 339, 446
AcuI CTGAAG 2 cut(s) 212, 981
AfaI GTAC 1 cut(s) 468
AflII CTTAAG 1 cut(s) 818
AgsI TTSAA 5 cut(s) 203, 304, 386, 451, 937
AjuI GAANNNNNNNTTGG 4 cut(s) 226, 258, 654, 686
Alw21I GWGCWC 1 cut(s) 649
Alw26I GTCTC 2 cut(s) 371, 1010
AlwI GGATC 5 cut(s) 254, 369, 585, 589, 896
AlwNI CAGNNNCTG 1 cut(s) 269
Ama87I CYCGRG 1 cut(s) 642
AoxI GGCC 2 cut(s) 567, 788
ApeKI GCWGC 4 cut(s) 44, 812, 899, 974
ApoI RAATTY 4 cut(s) 75, 241, 339, 446
AspLEI GCGC 2 cut(s) 139, 429
AspS9I GGNCC 1 cut(s) 1043
AsuC2I CCSGG 2 cut(s) 536, 657
AsuHPI GGTGA 2 cut(s) 686, 1126
AvaI CYCGRG 1 cut(s) 642
AvaII GGWCC 1 cut(s) 1043
AxyI CCTNAGG 1 cut(s) 471
BalI TGGCCA 1 cut(s) 569
BbsI GAAGAC 1 cut(s) 284
Bbv12I GWGCWC 1 cut(s) 649
BbvCI CCTCAGC 1 cut(s) 542
BbvI GCAGC 4 cut(s) 31, 799, 911, 961
BccI CCATC 3 cut(s) 346, 559, 1205
BceAI ACGGC 1 cut(s) 803
BcgI CGANNNNNNTGC 2 cut(s) 854, 888
BclI TGATCA 1 cut(s) 177
BcnI CCSGG 2 cut(s) 536, 657
BcoDI GTCTC 2 cut(s) 371, 1010
BfaI CTAG 1 cut(s) 1264
BfrI CTTAAG 1 cut(s) 818
BfuAI ACCTGC 1 cut(s) 1004
BisI GCNGC 4 cut(s) 45, 813, 900, 975
BlsI GCNGC 4 cut(s) 46, 814, 901, 976
Bme1390I CCNGG 2 cut(s) 536, 657
Bme18I GGWCC 1 cut(s) 1043
BmeT110I CYCGRG 1 cut(s) 642
BmgT120I GGNCC 1 cut(s) 1043
BmiI GGNNCC 1 cut(s) 1056
BmrFI CCNGG 2 cut(s) 536, 657
BmrI ACTGGG 1 cut(s) 921
BmsI GCATC 2 cut(s) 466, 874
BmuI ACTGGG 1 cut(s) 921
BpiI GAAGAC 1 cut(s) 284
BplI GAGNNNNNCTC 2 cut(s) 651, 683
Bpu10I CCTNAGC 1 cut(s) 542
BpuMI CCSGG 2 cut(s) 536, 657
BsaI GGTCTC 1 cut(s) 371
BsaJI CCNNGG 4 cut(s) 283, 570, 967, 1046
Bse1I ACTGG 1 cut(s) 916
Bse21I CCTNAGG 1 cut(s) 471
BseDI CCNNGG 4 cut(s) 283, 570, 967, 1046
BseGI GGATG 4 cut(s) 91, 481, 1222, 1249
BseMII CTCAG 2 cut(s) 366, 533
BseNI ACTGG 1 cut(s) 916
BseRI GAGGAG 1 cut(s) 236
BseXI GCAGC 4 cut(s) 31, 799, 911, 961
BsgI GTGCAG 1 cut(s) 798
Bsh1236I CGCG 3 cut(s) 139, 427, 1029
BshFI GGCC 2 cut(s) 569, 790
BsiHKAI GWGCWC 1 cut(s) 649
BsiHKCI CYCGRG 1 cut(s) 642
BsiSI CCGG 2 cut(s) 536, 657
BsmAI GTCTC 2 cut(s) 371, 1010
BsmBI CGTCTC 1 cut(s) 1010
BsmI GAATGC 1 cut(s) 1023
BsnI GGCC 2 cut(s) 569, 790
Bso31I GGTCTC 1 cut(s) 371
BsoBI CYCGRG 1 cut(s) 642
Bsp1286I GDGCHC 1 cut(s) 649
Bsp143I GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
BspACI CCGC 1 cut(s) 1029
BspANI GGCC 2 cut(s) 569, 790
BspCNI CTCAG 2 cut(s) 367, 534
BspFNI CGCG 3 cut(s) 139, 427, 1029
BspHI TCATGA 2 cut(s) 118, 625
BspLI GGNNCC 1 cut(s) 1056
BspMI ACCTGC 1 cut(s) 1004
BspPI GGATC 5 cut(s) 254, 369, 585, 589, 896
BspTI CTTAAG 1 cut(s) 818
BspTNI GGTCTC 1 cut(s) 371
BsrI ACTGG 1 cut(s) 916
BssECI CCNNGG 4 cut(s) 283, 570, 967, 1046
BssMI GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
BssT1I CCWWGG 2 cut(s) 570, 967
Bst4CI ACNGT 6 cut(s) 30, 116, 295, 382, 881, 1135
Bst6I CTCTTC 1 cut(s) 59
BstAFI CTTAAG 1 cut(s) 818
BstAPI GCANNNNNTGC 1 cut(s) 53
BstDEI CTNAG 3 cut(s) 375, 471, 542
BstDSI CCRYGG 2 cut(s) 283, 1046
BstF5I GGATG 4 cut(s) 91, 481, 1222, 1249
BstFNI CGCG 3 cut(s) 139, 427, 1029
BstHHI GCGC 2 cut(s) 139, 429
BstKTI GATC 7 cut(s) 180, 262, 364, 584, 593, 683, 891
BstMAI GTCTC 2 cut(s) 371, 1010
BstMBI GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
BstMWI GCNNNNNNNGC 3 cut(s) 53, 1035, 1150
BstSCI CCNGG 2 cut(s) 534, 655
BstUI CGCG 3 cut(s) 139, 427, 1029
BstV1I GCAGC 4 cut(s) 31, 799, 911, 961
BstV2I GAAGAC 1 cut(s) 284
BstX2I RGATCY 3 cut(s) 259, 581, 590
BstYI RGATCY 3 cut(s) 259, 581, 590
Bsu36I CCTNAGG 1 cut(s) 471
BsuRI GGCC 2 cut(s) 569, 790
BtgI CCRYGG 2 cut(s) 283, 1046
BtsCI GGATG 4 cut(s) 91, 481, 1222, 1249
BtsIMutI CAGTG 2 cut(s) 890, 1140
BveI ACCTGC 1 cut(s) 1004
CaiI CAGNNNCTG 1 cut(s) 269
CciI TCATGA 2 cut(s) 118, 625
CfoI GCGC 2 cut(s) 139, 429
Cfr13I GGNCC 1 cut(s) 1043
Csp6I GTAC 1 cut(s) 467
CviAII CATG 5 cut(s) 41, 119, 311, 602, 626
CviQI GTAC 1 cut(s) 467
DdeI CTNAG 3 cut(s) 375, 471, 542
DpnI GATC 7 cut(s) 179, 261, 363, 583, 592, 682, 890
DpnII GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
DraI TTTAAA 1 cut(s) 613
EaeI YGGCCR 1 cut(s) 567
Eam1104I CTCTTC 1 cut(s) 59
EarI CTCTTC 1 cut(s) 59
Eco130I CCWWGG 2 cut(s) 570, 967
Eco31I GGTCTC 1 cut(s) 371
Eco47I GGWCC 1 cut(s) 1043
Eco57I CTGAAG 2 cut(s) 212, 981
Eco81I CCTNAGG 1 cut(s) 471
Eco88I CYCGRG 1 cut(s) 642
EcoRI GAATTC 2 cut(s) 241, 339
EcoT14I CCWWGG 2 cut(s) 570, 967
EcoT22I ATGCAT 1 cut(s) 867
ErhI CCWWGG 2 cut(s) 570, 967
Esp3I CGTCTC 1 cut(s) 1010
FaeI CATG 5 cut(s) 44, 122, 314, 605, 629
FalI AAGNNNNNCTT 2 cut(s) 801, 833
FatI CATG 5 cut(s) 40, 118, 310, 601, 625
FauNDI CATATG 1 cut(s) 804
FbaI TGATCA 1 cut(s) 177
Fnu4HI GCNGC 4 cut(s) 45, 813, 900, 975
FokI GGATG 4 cut(s) 98, 488, 1229, 1256
Fsp4HI GCNGC 4 cut(s) 45, 813, 900, 975
FspBI CTAG 1 cut(s) 1264
GlaI GCGC 2 cut(s) 138, 428
GluI GCNGC 4 cut(s) 45, 813, 900, 975
HaeIII GGCC 2 cut(s) 569, 790
HapII CCGG 2 cut(s) 536, 657
HhaI GCGC 2 cut(s) 139, 429
Hin1II CATG 5 cut(s) 44, 122, 314, 605, 629
Hin6I GCGC 2 cut(s) 137, 427
HinP1I GCGC 2 cut(s) 137, 427
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 1142
HinfI GANTC 1 cut(s) 937
HpaI GTTAAC 1 cut(s) 406
HpaII CCGG 2 cut(s) 536, 657
HphI GGTGA 2 cut(s) 686, 1126
Hpy166II GTNNAC 3 cut(s) 406, 785, 1046
Hpy188I TCNGA 3 cut(s) 504, 761, 942
Hpy188III TCNNGA 6 cut(s) 119, 130, 263, 349, 626, 875
Hpy8I GTNNAC 3 cut(s) 406, 785, 1046
HpyAV CCTTC 2 cut(s) 127, 1045
HpyCH4III ACNGT 6 cut(s) 30, 116, 295, 382, 881, 1135
HpyCH4V TGCA 6 cut(s) 47, 815, 865, 1013, 1088, 1259
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 1035, 1150
HpyF3I CTNAG 3 cut(s) 375, 471, 542
Hsp92II CATG 5 cut(s) 44, 122, 314, 605, 629
HspAI GCGC 2 cut(s) 137, 427
Ksp22I TGATCA 1 cut(s) 177
KspAI GTTAAC 1 cut(s) 406
Kzo9I GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
LmnI GCTCC 4 cut(s) 375, 442, 538, 855
LpnPI CCDG 9 cut(s) 183, 276, 282, 387, 549, 670, 897, 999, 1019
Lsp1109I GCAGC 4 cut(s) 31, 799, 911, 961
LweI GCATC 2 cut(s) 466, 874
MaeI CTAG 1 cut(s) 1264
MaeIII GTNAC 4 cut(s) 597, 707, 875, 1099
MalI GATC 7 cut(s) 179, 261, 363, 583, 592, 682, 890
MboI GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
MboII GAAGA 7 cut(s) 16, 76, 289, 571, 574, 1181, 1259
MflI RGATCY 3 cut(s) 259, 581, 590
MhlI GDGCHC 1 cut(s) 649
MlsI TGGCCA 1 cut(s) 569
MluCI AATT 8 cut(s) 75, 241, 339, 431, 446, 511, 850, 932
MluNI TGGCCA 1 cut(s) 569
MnlI CCTC 9 cut(s) 214, 261, 490, 537, 773, 988, 1013, 1143, 1246
Mox20I TGGCCA 1 cut(s) 569
Mph1103I ATGCAT 1 cut(s) 867
MscI TGGCCA 1 cut(s) 569
MseI TTAA 4 cut(s) 405, 612, 740, 819
Msp20I TGGCCA 1 cut(s) 569
MspA1I CMGCKG 1 cut(s) 902
MspCI CTTAAG 1 cut(s) 818
MspI CCGG 2 cut(s) 536, 657
MspR9I CCNGG 2 cut(s) 536, 657
Mva1269I GAATGC 1 cut(s) 1023
MvnI CGCG 3 cut(s) 139, 427, 1029
MwoI GCNNNNNNNGC 3 cut(s) 53, 1035, 1150
NciI CCSGG 2 cut(s) 536, 657
NdeI CATATG 1 cut(s) 804
NdeII GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
NlaIII CATG 5 cut(s) 44, 122, 314, 605, 629
NlaIV GGNNCC 1 cut(s) 1056
NmuCI GTSAC 3 cut(s) 707, 875, 1099
NsiI ATGCAT 1 cut(s) 867
PaeR7I CTCGAG 1 cut(s) 642
PagI TCATGA 2 cut(s) 118, 625
PctI GAATGC 1 cut(s) 1023
PfeI GAWTC 1 cut(s) 937
PkrI GCNGC 4 cut(s) 46, 814, 901, 976
PspN4I GGNNCC 1 cut(s) 1056
PspPI GGNCC 1 cut(s) 1043
PspXI VCTCGAGB 1 cut(s) 642
PstNI CAGNNNCTG 1 cut(s) 269
PsuI RGATCY 3 cut(s) 259, 581, 590
PvuII CAGCTG 1 cut(s) 902
RsaI GTAC 1 cut(s) 468
RsaNI GTAC 1 cut(s) 467
SaqAI TTAA 4 cut(s) 405, 612, 740, 819
SatI GCNGC 4 cut(s) 45, 813, 900, 975
Sau3AI GATC 7 cut(s) 177, 259, 361, 581, 590, 680, 888
Sau96I GGNCC 1 cut(s) 1043
ScrFI CCNGG 2 cut(s) 536, 657
SduI GDGCHC 1 cut(s) 649
SfaNI GCATC 2 cut(s) 466, 874
Sfr274I CTCGAG 1 cut(s) 642
SinI GGWCC 1 cut(s) 1043
SlaI CTCGAG 1 cut(s) 642
SmlI CTYRAG 2 cut(s) 642, 818
SmoI CTYRAG 2 cut(s) 642, 818
Sse9I AATT 8 cut(s) 75, 241, 339, 431, 446, 511, 850, 932
SsiI CCGC 1 cut(s) 1029
SspI AATATT 1 cut(s) 22
SspMI CTAG 1 cut(s) 1264
StyD4I CCNGG 2 cut(s) 534, 655
StyI CCWWGG 2 cut(s) 570, 967
TaaI ACNGT 6 cut(s) 30, 116, 295, 382, 881, 1135
TaqI TCGA 2 cut(s) 643, 753
TasI AATT 8 cut(s) 75, 241, 339, 431, 446, 511, 850, 932
TfiI GAWTC 1 cut(s) 937
Tru1I TTAA 4 cut(s) 405, 612, 740, 819
Tru9I TTAA 4 cut(s) 405, 612, 740, 819
TscAI CASTG 2 cut(s) 890, 1140
TseFI GTSAC 3 cut(s) 707, 875, 1099
TseI GCWGC 4 cut(s) 44, 812, 899, 974
Tsp45I GTSAC 3 cut(s) 707, 875, 1099
TspDTI ATGAA 7 cut(s) 17, 135, 705, 709, 741, 1002, 1260
TspGWI ACGGA 2 cut(s) 1063, 1087
TspRI CASTG 2 cut(s) 890, 1140
Vha464I CTTAAG 1 cut(s) 818
VpaK11BI GGWCC 1 cut(s) 1043
XapI RAATTY 4 cut(s) 75, 241, 339, 446
XhoI CTCGAG 1 cut(s) 642
XspI CTAG 1 cut(s) 1264
Zsp2I ATGCAT 1 cut(s) 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.