No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Homeodomain | PF00046 | 23 - 82 | 9.2e-13 | Homeodomain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 346 |
| AccB1I | GGYRCC | 1 cut(s) | 424 |
| AccII | CGCG | 1 cut(s) | 9 |
| AciI | CCGC | 6 cut(s) | 143, 158, 283, 299, 302, 501 |
| AclWI | GGATC | 1 cut(s) | 596 |
| AcsI | RAATTY | 2 cut(s) | 146, 697 |
| AcuI | CTGAAG | 1 cut(s) | 660 |
| AfaI | GTAC | 1 cut(s) | 314 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 298, 649 |
| AgsI | TTSAA | 2 cut(s) | 280, 802 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 20, 52 |
| AluBI | AGCT | 2 cut(s) | 267, 717 |
| AluI | AGCT | 2 cut(s) | 267, 717 |
| Alw26I | GTCTC | 2 cut(s) | 235, 448 |
| AlwI | GGATC | 1 cut(s) | 596 |
| AoxI | GGCC | 3 cut(s) | 303, 640, 664 |
| ApeKI | GCWGC | 1 cut(s) | 360 |
| ApoI | RAATTY | 2 cut(s) | 146, 697 |
| AseI | ATTAAT | 1 cut(s) | 584 |
| AspLEI | GCGC | 3 cut(s) | 9, 347, 531 |
| AspS9I | GGNCC | 1 cut(s) | 665 |
| AsuHPI | GGTGA | 2 cut(s) | 139, 755 |
| AsuNHI | GCTAGC | 1 cut(s) | 263 |
| BanI | GGYRCC | 1 cut(s) | 424 |
| BbvI | GCAGC | 1 cut(s) | 372 |
| BccI | CCATC | 1 cut(s) | 674 |
| BceAI | ACGGC | 1 cut(s) | 180 |
| BcoDI | GTCTC | 2 cut(s) | 235, 448 |
| BfaI | CTAG | 2 cut(s) | 264, 753 |
| BfmI | CTRYAG | 2 cut(s) | 358, 647 |
| BisI | GCNGC | 3 cut(s) | 300, 303, 361 |
| BlsI | GCNGC | 3 cut(s) | 301, 304, 362 |
| BmgT120I | GGNCC | 1 cut(s) | 665 |
| BmiI | GGNNCC | 1 cut(s) | 426 |
| BmrI | ACTGGG | 1 cut(s) | 132 |
| BmsI | GCATC | 1 cut(s) | 559 |
| BmtI | GCTAGC | 1 cut(s) | 267 |
| BmuI | ACTGGG | 1 cut(s) | 132 |
| BpmI | CTGGAG | 3 cut(s) | 77, 125, 363 |
| Bpu10I | CCTNAGC | 1 cut(s) | 173 |
| BsaAI | YACGTR | 1 cut(s) | 22 |
| BsaI | GGTCTC | 1 cut(s) | 448 |
| BsaJI | CCNNGG | 3 cut(s) | 84, 420, 532 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 98, 128 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 298, 649 |
| Bse1I | ACTGG | 3 cut(s) | 138, 380, 477 |
| BseDI | CCNNGG | 3 cut(s) | 84, 420, 532 |
| BseGI | GGATG | 2 cut(s) | 415, 481 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 298, 649 |
| BseMII | CTCAG | 2 cut(s) | 187, 323 |
| BseNI | ACTGG | 3 cut(s) | 138, 380, 477 |
| BseRI | GAGGAG | 1 cut(s) | 318 |
| BseXI | GCAGC | 1 cut(s) | 372 |
| Bsh1236I | CGCG | 1 cut(s) | 9 |
| BshFI | GGCC | 3 cut(s) | 305, 642, 666 |
| BshNI | GGYRCC | 1 cut(s) | 424 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 298, 649 |
| BsmAI | GTCTC | 2 cut(s) | 235, 448 |
| BsnI | GGCC | 3 cut(s) | 305, 642, 666 |
| Bso31I | GGTCTC | 1 cut(s) | 448 |
| Bsp143I | GATC | 3 cut(s) | 13, 354, 601 |
| Bsp19I | CCATGG | 1 cut(s) | 532 |
| BspACI | CCGC | 6 cut(s) | 143, 158, 283, 299, 302, 501 |
| BspANI | GGCC | 3 cut(s) | 305, 642, 666 |
| BspCNI | CTCAG | 2 cut(s) | 186, 322 |
| BspFNI | CGCG | 1 cut(s) | 9 |
| BspLI | GGNNCC | 1 cut(s) | 426 |
| BspMAI | CTGCAG | 1 cut(s) | 362 |
| BspOI | GCTAGC | 1 cut(s) | 267 |
| BspPI | GGATC | 1 cut(s) | 596 |
| BspQI | GCTCTTC | 1 cut(s) | 724 |
| BspT107I | GGYRCC | 1 cut(s) | 424 |
| BspTNI | GGTCTC | 1 cut(s) | 448 |
| BsrI | ACTGG | 3 cut(s) | 138, 380, 477 |
| BssECI | CCNNGG | 3 cut(s) | 84, 420, 532 |
| BssMI | GATC | 3 cut(s) | 13, 354, 601 |
| BssT1I | CCWWGG | 3 cut(s) | 84, 420, 532 |
| Bst4CI | ACNGT | 2 cut(s) | 32, 621 |
| Bst6I | CTCTTC | 1 cut(s) | 724 |
| BstBAI | YACGTR | 1 cut(s) | 22 |
| BstC8I | GCNNGC | 1 cut(s) | 265 |
| BstDEI | CTNAG | 3 cut(s) | 173, 309, 693 |
| BstDSI | CCRYGG | 1 cut(s) | 532 |
| BstEII | GGTNACC | 1 cut(s) | 743 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 647 |
| BstF5I | GGATG | 2 cut(s) | 415, 481 |
| BstFNI | CGCG | 1 cut(s) | 9 |
| BstHHI | GCGC | 3 cut(s) | 9, 347, 531 |
| BstKTI | GATC | 3 cut(s) | 16, 357, 604 |
| BstMAI | GTCTC | 2 cut(s) | 235, 448 |
| BstMBI | GATC | 3 cut(s) | 13, 354, 601 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 164, 269, 549 |
| BstPI | GGTNACC | 1 cut(s) | 743 |
| BstSFI | CTRYAG | 2 cut(s) | 358, 647 |
| BstUI | CGCG | 1 cut(s) | 9 |
| BstV1I | GCAGC | 1 cut(s) | 372 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 539 |
| BsuRI | GGCC | 3 cut(s) | 305, 642, 666 |
| BtgI | CCRYGG | 1 cut(s) | 532 |
| BtsCI | GGATG | 2 cut(s) | 415, 481 |
| BtsI | GCAGTG | 2 cut(s) | 502, 611 |
| BtsIMutI | CAGTG | 6 cut(s) | 145, 387, 502, 611, 617, 778 |
| Cac8I | GCNNGC | 1 cut(s) | 265 |
| CfoI | GCGC | 3 cut(s) | 9, 347, 531 |
| Cfr13I | GGNCC | 1 cut(s) | 665 |
| Csp6I | GTAC | 1 cut(s) | 313 |
| CviAII | CATG | 3 cut(s) | 44, 533, 740 |
| CviQI | GTAC | 1 cut(s) | 313 |
| DdeI | CTNAG | 3 cut(s) | 173, 309, 693 |
| DpnI | GATC | 3 cut(s) | 15, 356, 603 |
| DpnII | GATC | 3 cut(s) | 13, 354, 601 |
| Eam1104I | CTCTTC | 1 cut(s) | 724 |
| EarI | CTCTTC | 1 cut(s) | 724 |
| Eco130I | CCWWGG | 3 cut(s) | 84, 420, 532 |
| Eco147I | AGGCCT | 1 cut(s) | 642 |
| Eco31I | GGTCTC | 1 cut(s) | 448 |
| Eco57I | CTGAAG | 1 cut(s) | 660 |
| Eco91I | GGTNACC | 1 cut(s) | 743 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 647 |
| EcoO109I | RGGNCCY | 1 cut(s) | 665 |
| EcoO65I | GGTNACC | 1 cut(s) | 743 |
| EcoRI | GAATTC | 2 cut(s) | 146, 697 |
| EcoT14I | CCWWGG | 3 cut(s) | 84, 420, 532 |
| ErhI | CCWWGG | 3 cut(s) | 84, 420, 532 |
| FaeI | CATG | 3 cut(s) | 47, 536, 743 |
| FatI | CATG | 3 cut(s) | 43, 532, 739 |
| Fnu4HI | GCNGC | 3 cut(s) | 300, 303, 361 |
| FokI | GGATG | 2 cut(s) | 402, 488 |
| Fsp4HI | GCNGC | 3 cut(s) | 300, 303, 361 |
| FspBI | CTAG | 2 cut(s) | 264, 753 |
| FspI | TGCGCA | 1 cut(s) | 346 |
| GlaI | GCGC | 3 cut(s) | 8, 346, 530 |
| GluI | GCNGC | 3 cut(s) | 300, 303, 361 |
| GsuI | CTGGAG | 3 cut(s) | 77, 125, 363 |
| HaeIII | GGCC | 3 cut(s) | 305, 642, 666 |
| HhaI | GCGC | 3 cut(s) | 9, 347, 531 |
| Hin1II | CATG | 3 cut(s) | 47, 536, 743 |
| Hin6I | GCGC | 3 cut(s) | 7, 345, 529 |
| HinP1I | GCGC | 3 cut(s) | 7, 345, 529 |
| HinfI | GANTC | 5 cut(s) | 76, 109, 133, 223, 462 |
| HphI | GGTGA | 2 cut(s) | 139, 755 |
| Hpy188I | TCNGA | 4 cut(s) | 81, 222, 598, 679 |
| Hpy188III | TCNNGA | 2 cut(s) | 466, 605 |
| Hpy99I | CGWCG | 1 cut(s) | 70 |
| HpyAV | CCTTC | 3 cut(s) | 241, 656, 678 |
| HpyCH4III | ACNGT | 2 cut(s) | 32, 621 |
| HpyCH4IV | ACGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 2 cut(s) | 360, 495 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 164, 269, 549 |
| HpyF3I | CTNAG | 3 cut(s) | 173, 309, 693 |
| HpySE526I | ACGT | 1 cut(s) | 21 |
| Hsp92II | CATG | 3 cut(s) | 47, 536, 743 |
| HspAI | GCGC | 3 cut(s) | 7, 345, 529 |
| Kzo9I | GATC | 3 cut(s) | 13, 354, 601 |
| LguI | GCTCTTC | 1 cut(s) | 724 |
| LmnI | GCTCC | 2 cut(s) | 4, 88 |
| Lsp1109I | GCAGC | 1 cut(s) | 372 |
| LweI | GCATC | 1 cut(s) | 559 |
| MaeI | CTAG | 2 cut(s) | 264, 753 |
| MaeII | ACGT | 1 cut(s) | 21 |
| MaeIII | GTNAC | 4 cut(s) | 160, 185, 743, 791 |
| MalI | GATC | 3 cut(s) | 15, 356, 603 |
| MboI | GATC | 3 cut(s) | 13, 354, 601 |
| MboII | GAAGA | 3 cut(s) | 23, 211, 711 |
| MluCI | AATT | 4 cut(s) | 146, 685, 697, 802 |
| MlyI | GAGTC | 1 cut(s) | 127 |
| MmeI | TCCRAC | 1 cut(s) | 104 |
| MseI | TTAA | 1 cut(s) | 584 |
| MslI | CAYNNNNRTG | 1 cut(s) | 537 |
| MvnI | CGCG | 1 cut(s) | 9 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 164, 269, 549 |
| NcoI | CCATGG | 1 cut(s) | 532 |
| NdeII | GATC | 3 cut(s) | 13, 354, 601 |
| NheI | GCTAGC | 1 cut(s) | 263 |
| NlaIII | CATG | 3 cut(s) | 47, 536, 743 |
| NlaIV | GGNNCC | 1 cut(s) | 426 |
| NmuCI | GTSAC | 3 cut(s) | 185, 743, 791 |
| NsbI | TGCGCA | 1 cut(s) | 346 |
| PceI | AGGCCT | 1 cut(s) | 642 |
| PciSI | GCTCTTC | 1 cut(s) | 724 |
| PfeI | GAWTC | 4 cut(s) | 76, 109, 223, 462 |
| PkrI | GCNGC | 3 cut(s) | 301, 304, 362 |
| PleI | GAGTC | 1 cut(s) | 127 |
| PpsI | GAGTC | 1 cut(s) | 127 |
| Ppu21I | YACGTR | 1 cut(s) | 22 |
| PshBI | ATTAAT | 1 cut(s) | 584 |
| PspEI | GGTNACC | 1 cut(s) | 743 |
| PspN4I | GGNNCC | 1 cut(s) | 426 |
| PspPI | GGNCC | 1 cut(s) | 665 |
| PstI | CTGCAG | 1 cut(s) | 362 |
| RsaI | GTAC | 1 cut(s) | 314 |
| RsaNI | GTAC | 1 cut(s) | 313 |
| RseI | CAYNNNNRTG | 1 cut(s) | 537 |
| SapI | GCTCTTC | 1 cut(s) | 724 |
| SaqAI | TTAA | 1 cut(s) | 584 |
| SatI | GCNGC | 3 cut(s) | 300, 303, 361 |
| Sau3AI | GATC | 3 cut(s) | 13, 354, 601 |
| Sau96I | GGNCC | 1 cut(s) | 665 |
| SchI | GAGTC | 1 cut(s) | 127 |
| SetI | ASST | 6 cut(s) | 24, 74, 269, 379, 426, 719 |
| SfaNI | GCATC | 1 cut(s) | 559 |
| SfcI | CTRYAG | 2 cut(s) | 358, 647 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 537 |
| Sse9I | AATT | 4 cut(s) | 146, 685, 697, 802 |
| SseBI | AGGCCT | 1 cut(s) | 642 |
| SsiI | CCGC | 6 cut(s) | 143, 158, 283, 299, 302, 501 |
| SspMI | CTAG | 2 cut(s) | 264, 753 |
| StuI | AGGCCT | 1 cut(s) | 642 |
| StyI | CCWWGG | 3 cut(s) | 84, 420, 532 |
| TaaI | ACNGT | 2 cut(s) | 32, 621 |
| TaiI | ACGT | 1 cut(s) | 24 |
| TaqI | TCGA | 2 cut(s) | 465, 701 |
| TasI | AATT | 4 cut(s) | 146, 685, 697, 802 |
| TauI | GCSGC | 2 cut(s) | 302, 305 |
| TfiI | GAWTC | 4 cut(s) | 76, 109, 223, 462 |
| Tru1I | TTAA | 1 cut(s) | 584 |
| Tru9I | TTAA | 1 cut(s) | 584 |
| TscAI | CASTG | 6 cut(s) | 145, 387, 502, 618, 624, 778 |
| TseFI | GTSAC | 3 cut(s) | 185, 743, 791 |
| TseI | GCWGC | 1 cut(s) | 360 |
| Tsp45I | GTSAC | 3 cut(s) | 185, 743, 791 |
| TspDTI | ATGAA | 2 cut(s) | 139, 675 |
| TspRI | CASTG | 6 cut(s) | 145, 387, 502, 618, 624, 778 |
| VspI | ATTAAT | 1 cut(s) | 584 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 647 |
| XapI | RAATTY | 2 cut(s) | 146, 697 |
| XspI | CTAG | 2 cut(s) | 264, 753 |