Rorug03G0045600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000090
Physical Location & Seq
Forward (+)
3520860 .. 3523016
2157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0045600.1

Sequence Viewer

Length: 1086 bp
ATGACAGTATCTAGCGAGAATACACAGGAGATTTTTGGGTTTTTGCGGCTTGTTAATACGTATGGATTGAGTTCGATGTATGATGCGAAAGATCTTCAAAGCCTTCTTGCTGTTGTTCATAAGCCCGAACAAGCATCTCAATCAAGTAGGGCCCTTGGTATCAAAGATAAAGCACCTGGGACCAGCATCATTTCTTCCCTTATCAAAACTGTGGAACCAGAATCTTCACTGGCTATAAATGCAACAACTCTCTCTTCTCCGAATCCTTCTTCCCAGAATGACATGTTGGCTTCTCTTTTATTGGTCTCTGACCCAGCAGAACATGTCTTGAATAGTGTGCAGAGATCATTTTCTCAGTACTGGAAACATGAAGATGTTAGTTTCAAACAACGTATCATGTTGAATAACATGTCTTTGTTGGAGTGTCTAATGATTGTCTCACCACATATTGGACCTCATGTGAAAGAAGATGCAAAACTTCTTGCAGCCTATTGGAAAGCAAAGATGACAGGCAATACTGAAAATTCAGTTGAGACTTTAGGATTTTTGCTGTTTATATCTACATATGGATTGGTTTCTACATTGAATACAGAGGAGATTATAAAGCTTCTTGAGGTGATATCTCAGAATAAAGGGGCTGTAGATTTATGTCAGACGCATGGTTATGCAGATAAGATCTCTGATTTTATTCGGAATCTGATAGAAAGGAAGCAACTGATGGATGCTGTTGGATTTATTTGCACCTTCAACCTAGCTGACAAGCTCCCCCCAATACCACTCTTAAAACAATATGTAGAGGATGCAAAGAAGTGTTCCGAAGTTAAGATTGTAGACAACCTCATAGCTGATCTAAGAGCTGGGAAACAATGCATCAAAGAATACCATCTCGAGTGCAAATACCCATATGCGGACATTGAAATGCAAATAGTTCAGCTGGAAAAACTGAAGGAGAATTGGAGATGCTCAGCGCCATCTCTTGGCTCCAGTATTGTTGAATCACAAGTGCAGAGAAAAAGAAAGAAGCCTAATACTAGTAGTTCTGCCCGTACGCGTGGATTTCCATCACAACAGCAGCGTAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

361

Amino Acids

40.34

Weight (kDa)

8.34

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Frigida PF07899 92 - 318 4.7e-48 Frigida-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 602
AccB7I CCANNNNNTGG 2 cut(s) 449, 977
AccI GTMKAC 1 cut(s) 831
AccII CGCG 1 cut(s) 1051
AciI CCGC 2 cut(s) 46, 908
AcsI RAATTY 1 cut(s) 523
AcuI CTGAAG 1 cut(s) 965
AfaI GTAC 2 cut(s) 359, 1048
AfiI CCNNNNNNNGG 3 cut(s) 449, 907, 977
AflIII ACRYGT 4 cut(s) 282, 322, 408, 1049
AgsI TTSAA 8 cut(s) 98, 331, 385, 403, 586, 748, 917, 995
AhlI ACTAGT 1 cut(s) 1031
AjnI CCWGG 1 cut(s) 175
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
AluBI AGCT 7 cut(s) 607, 755, 763, 845, 857, 934, 1081
AluI AGCT 7 cut(s) 607, 755, 763, 845, 857, 934, 1081
Alw26I GTCTC 3 cut(s) 310, 442, 527
Ama87I CYCGRG 1 cut(s) 887
AoxI GGCC 1 cut(s) 150
ApaI GGGCCC 1 cut(s) 154
ApeKI GCWGC 2 cut(s) 485, 1072
ApoI RAATTY 1 cut(s) 523
AspLEI GCGC 1 cut(s) 970
AspS9I GGNCC 4 cut(s) 150, 151, 180, 452
AsuHPI GGTGA 2 cut(s) 432, 628
AvaI CYCGRG 1 cut(s) 887
AvaII GGWCC 2 cut(s) 180, 452
BaeGI GKGCMC 1 cut(s) 154
BanII GRGCYC 1 cut(s) 154
BbvI GCAGC 1 cut(s) 497
BccI CCATC 4 cut(s) 712, 891, 979, 1069
BciT130I CCWGG 1 cut(s) 177
BcoDI GTCTC 3 cut(s) 310, 442, 527
BcuI ACTAGT 1 cut(s) 1031
BfaI CTAG 3 cut(s) 12, 752, 1032
BfmI CTRYAG 1 cut(s) 639
BfoI RGCGCY 1 cut(s) 971
BglII AGATCT 2 cut(s) 91, 675
BisI GCNGC 3 cut(s) 47, 486, 1073
BlpI GCTNAGC 1 cut(s) 964
BlsI GCNGC 3 cut(s) 48, 487, 1074
BmcAI AGTACT 1 cut(s) 359
Bme1390I CCNGG 1 cut(s) 177
Bme18I GGWCC 2 cut(s) 180, 452
BmeT110I CYCGRG 1 cut(s) 887
BmgT120I GGNCC 4 cut(s) 150, 151, 180, 452
BmiI GGNNCC 4 cut(s) 152, 181, 216, 982
BmrFI CCNGG 1 cut(s) 177
BmsI GCATC 8 cut(s) 73, 143, 195, 460, 712, 790, 879, 950
BpmI CTGGAG 1 cut(s) 967
Bpu1102I GCTNAGC 1 cut(s) 964
BpuEI CTTGAG 1 cut(s) 632
BsaAI YACGTR 1 cut(s) 60
BsaBI GATNNNNATC 1 cut(s) 1060
BsaI GGTCTC 1 cut(s) 310
BsaJI CCNNGG 2 cut(s) 154, 176
Bsc4I CCNNNNNNNGG 3 cut(s) 449, 907, 977
Bse1I ACTGG 3 cut(s) 234, 365, 984
Bse8I GATNNNNATC 1 cut(s) 1060
BseBI CCWGG 1 cut(s) 177
BseDI CCNNGG 2 cut(s) 154, 176
BseGI GGATG 2 cut(s) 727, 805
BseJI GATNNNNATC 1 cut(s) 1060
BseLI CCNNNNNNNGG 3 cut(s) 449, 907, 977
BseMII CTCAG 3 cut(s) 368, 638, 978
BseNI ACTGG 3 cut(s) 234, 365, 984
BseRI GAGGAG 1 cut(s) 608
BseSI GKGCMC 1 cut(s) 154
BseXI GCAGC 1 cut(s) 497
BseYI CCCAGC 2 cut(s) 313, 857
BsgI GTGCAG 2 cut(s) 359, 1025
Bsh1236I CGCG 1 cut(s) 1051
BshFI GGCC 1 cut(s) 152
BsiHKCI CYCGRG 1 cut(s) 887
BsiWI CGTACG 1 cut(s) 1046
BslFI GGGAC 1 cut(s) 193
BslI CCNNNNNNNGG 3 cut(s) 449, 907, 977
BsmAI GTCTC 3 cut(s) 310, 442, 527
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 1 cut(s) 152
Bso31I GGTCTC 1 cut(s) 310
BsoBI CYCGRG 1 cut(s) 887
Bsp120I GGGCCC 1 cut(s) 150
Bsp1286I GDGCHC 1 cut(s) 154
Bsp143I GATC 4 cut(s) 91, 344, 675, 847
Bsp1720I GCTNAGC 1 cut(s) 964
BspACI CCGC 2 cut(s) 46, 908
BspANI GGCC 1 cut(s) 152
BspCNI CTCAG 3 cut(s) 367, 637, 977
BspFNI CGCG 1 cut(s) 1051
BspLI GGNNCC 4 cut(s) 152, 181, 216, 982
BspTNI GGTCTC 1 cut(s) 310
BsrI ACTGG 3 cut(s) 234, 365, 984
BssECI CCNNGG 2 cut(s) 154, 176
BssMI GATC 4 cut(s) 91, 344, 675, 847
BssT1I CCWWGG 1 cut(s) 154
Bst2UI CCWGG 1 cut(s) 177
Bst4CI ACNGT 2 cut(s) 7, 211
Bst6I CTCTTC 1 cut(s) 259
BstBAI YACGTR 1 cut(s) 60
BstDEI CTNAG 4 cut(s) 354, 624, 851, 964
BstF5I GGATG 2 cut(s) 727, 805
BstFNI CGCG 1 cut(s) 1051
BstH2I RGCGCY 1 cut(s) 971
BstHHI GCGC 1 cut(s) 970
BstKTI GATC 4 cut(s) 94, 347, 678, 850
BstMAI GTCTC 3 cut(s) 310, 442, 527
BstMBI GATC 4 cut(s) 91, 344, 675, 847
BstMWI GCNNNNNNNGC 2 cut(s) 239, 1078
BstNI CCWGG 1 cut(s) 177
BstNSI RCATGY 3 cut(s) 286, 326, 412
BstSCI CCNGG 1 cut(s) 175
BstSFI CTRYAG 1 cut(s) 639
BstSLI GKGCMC 1 cut(s) 154
BstSNI TACGTA 1 cut(s) 60
BstUI CGCG 1 cut(s) 1051
BstV1I GCAGC 1 cut(s) 497
BstX2I RGATCY 2 cut(s) 91, 675
BstYI RGATCY 2 cut(s) 91, 675
BsuRI GGCC 1 cut(s) 152
BtsCI GGATG 2 cut(s) 727, 805
BtsIMutI CAGTG 1 cut(s) 227
CfoI GCGC 1 cut(s) 970
Cfr13I GGNCC 4 cut(s) 150, 151, 180, 452
CseI GACGC 1 cut(s) 664
Csp6I GTAC 2 cut(s) 358, 1047
CviAII CATG 7 cut(s) 283, 323, 368, 397, 409, 458, 659
CviQI GTAC 2 cut(s) 358, 1047
DdeI CTNAG 4 cut(s) 354, 624, 851, 964
DpnI GATC 4 cut(s) 93, 346, 677, 849
DpnII GATC 4 cut(s) 91, 344, 675, 847
Eam1104I CTCTTC 1 cut(s) 259
EarI CTCTTC 1 cut(s) 259
Eco105I TACGTA 1 cut(s) 60
Eco130I CCWWGG 1 cut(s) 154
Eco24I GRGCYC 1 cut(s) 154
Eco31I GGTCTC 1 cut(s) 310
Eco32I GATATC 1 cut(s) 621
Eco47I GGWCC 2 cut(s) 180, 452
Eco57I CTGAAG 1 cut(s) 965
Eco88I CYCGRG 1 cut(s) 887
EcoO109I RGGNCCY 2 cut(s) 150, 151
EcoRII CCWGG 1 cut(s) 175
EcoRV GATATC 1 cut(s) 621
EcoT14I CCWWGG 1 cut(s) 154
EcoT22I ATGCAT 1 cut(s) 872
EcoT38I GRGCYC 1 cut(s) 154
ErhI CCWWGG 1 cut(s) 154
FaeI CATG 7 cut(s) 286, 326, 371, 400, 412, 461, 662
FaqI GGGAC 1 cut(s) 193
FatI CATG 7 cut(s) 282, 322, 367, 396, 408, 457, 658
FauNDI CATATG 2 cut(s) 565, 904
FblI GTMKAC 1 cut(s) 831
Fnu4HI GCNGC 3 cut(s) 47, 486, 1073
FokI GGATG 2 cut(s) 734, 812
FriOI GRGCYC 1 cut(s) 154
Fsp4HI GCNGC 3 cut(s) 47, 486, 1073
FspBI CTAG 3 cut(s) 12, 752, 1032
GlaI GCGC 1 cut(s) 969
GluI GCNGC 3 cut(s) 47, 486, 1073
GsaI CCCAGC 2 cut(s) 317, 861
GsuI CTGGAG 1 cut(s) 967
HaeII RGCGCY 1 cut(s) 971
HaeIII GGCC 1 cut(s) 152
HgaI GACGC 1 cut(s) 664
HhaI GCGC 1 cut(s) 970
Hin1II CATG 7 cut(s) 286, 326, 371, 400, 412, 461, 662
Hin6I GCGC 1 cut(s) 968
HinP1I GCGC 1 cut(s) 968
HindIII AAGCTT 1 cut(s) 605
HinfI GANTC 4 cut(s) 221, 262, 694, 995
HphI GGTGA 2 cut(s) 432, 628
Hpy166II GTNNAC 1 cut(s) 832
Hpy188I TCNGA 8 cut(s) 261, 310, 627, 654, 682, 693, 699, 817
Hpy188III TCNNGA 3 cut(s) 328, 611, 887
Hpy8I GTNNAC 1 cut(s) 832
HpyAV CCTTC 4 cut(s) 113, 276, 754, 940
HpyCH4III ACNGT 2 cut(s) 7, 211
HpyCH4IV ACGT 2 cut(s) 59, 391
HpyF10VI GCNNNNNNNGC 2 cut(s) 239, 1078
HpyF3I CTNAG 4 cut(s) 354, 624, 851, 964
HpySE526I ACGT 2 cut(s) 59, 391
Hsp92II CATG 7 cut(s) 286, 326, 371, 400, 412, 461, 662
HspAI GCGC 1 cut(s) 968
Kzo9I GATC 4 cut(s) 91, 344, 675, 847
LmnI GCTCC 2 cut(s) 768, 986
Lsp1109I GCAGC 1 cut(s) 497
LweI GCATC 8 cut(s) 73, 143, 195, 460, 712, 790, 879, 950
MaeI CTAG 3 cut(s) 12, 752, 1032
MaeII ACGT 2 cut(s) 59, 391
MalI GATC 4 cut(s) 93, 346, 677, 849
MboI GATC 4 cut(s) 91, 344, 675, 847
MboII GAAGA 7 cut(s) 86, 186, 216, 246, 261, 383, 479
MflI RGATCY 2 cut(s) 91, 675
MhlI GDGCHC 1 cut(s) 154
MluCI AATT 2 cut(s) 523, 952
MluI ACGCGT 1 cut(s) 1049
MmeI TCCRAC 2 cut(s) 399, 709
MnlI CCTC 5 cut(s) 465, 586, 607, 790, 848
Mph1103I ATGCAT 1 cut(s) 872
MseI TTAA 3 cut(s) 54, 782, 822
MslI CAYNNNNRTG 3 cut(s) 372, 663, 917
MspA1I CMGCKG 1 cut(s) 934
MspR9I CCNGG 1 cut(s) 177
MvaI CCWGG 1 cut(s) 177
MvnI CGCG 1 cut(s) 1051
MwoI GCNNNNNNNGC 2 cut(s) 239, 1078
NdeI CATATG 2 cut(s) 565, 904
NdeII GATC 4 cut(s) 91, 344, 675, 847
NlaIII CATG 7 cut(s) 286, 326, 371, 400, 412, 461, 662
NlaIV GGNNCC 4 cut(s) 152, 181, 216, 982
NsiI ATGCAT 1 cut(s) 872
NspI RCATGY 3 cut(s) 286, 326, 412
PaeR7I CTCGAG 1 cut(s) 887
PciI ACATGT 3 cut(s) 282, 322, 408
PfeI GAWTC 4 cut(s) 221, 262, 694, 995
Pfl23II CGTACG 1 cut(s) 1046
PflMI CCANNNNNTGG 2 cut(s) 449, 977
PkrI GCNGC 3 cut(s) 48, 487, 1074
Ppu21I YACGTR 1 cut(s) 60
PscI ACATGT 3 cut(s) 282, 322, 408
PsiI TTATAA 1 cut(s) 602
Psp6I CCWGG 1 cut(s) 175
PspFI CCCAGC 2 cut(s) 313, 857
PspGI CCWGG 1 cut(s) 175
PspLI CGTACG 1 cut(s) 1046
PspN4I GGNNCC 4 cut(s) 152, 181, 216, 982
PspOMI GGGCCC 1 cut(s) 150
PspPI GGNCC 4 cut(s) 150, 151, 180, 452
PsuI RGATCY 2 cut(s) 91, 675
PvuII CAGCTG 1 cut(s) 934
RsaI GTAC 2 cut(s) 359, 1048
RsaNI GTAC 2 cut(s) 358, 1047
RseI CAYNNNNRTG 3 cut(s) 372, 663, 917
SaqAI TTAA 3 cut(s) 54, 782, 822
SatI GCNGC 3 cut(s) 47, 486, 1073
Sau3AI GATC 4 cut(s) 91, 344, 675, 847
Sau96I GGNCC 4 cut(s) 150, 151, 180, 452
ScaI AGTACT 1 cut(s) 359
ScrFI CCNGG 1 cut(s) 177
SduI GDGCHC 1 cut(s) 154
SfaNI GCATC 8 cut(s) 73, 143, 195, 460, 712, 790, 879, 950
SfcI CTRYAG 1 cut(s) 639
Sfr274I CTCGAG 1 cut(s) 887
SinI GGWCC 2 cut(s) 180, 452
SlaI CTCGAG 1 cut(s) 887
SmiMI CAYNNNNRTG 3 cut(s) 372, 663, 917
SmlI CTYRAG 2 cut(s) 611, 887
SmoI CTYRAG 2 cut(s) 611, 887
SnaBI TACGTA 1 cut(s) 60
SpeI ACTAGT 1 cut(s) 1031
Sse9I AATT 2 cut(s) 523, 952
SsiI CCGC 2 cut(s) 46, 908
SspMI CTAG 3 cut(s) 12, 752, 1032
StyD4I CCNGG 1 cut(s) 175
StyI CCWWGG 1 cut(s) 154
TaaI ACNGT 2 cut(s) 7, 211
TaiI ACGT 2 cut(s) 62, 394
TaqI TCGA 2 cut(s) 74, 888
TasI AATT 2 cut(s) 523, 952
TatI WGTACW 1 cut(s) 357
TauI GCSGC 1 cut(s) 49
TfiI GAWTC 4 cut(s) 221, 262, 694, 995
Tru1I TTAA 3 cut(s) 54, 782, 822
Tru9I TTAA 3 cut(s) 54, 782, 822
TscAI CASTG 1 cut(s) 234
TseI GCWGC 2 cut(s) 485, 1072
TspDTI ATGAA 2 cut(s) 107, 384
TspRI CASTG 1 cut(s) 234
Van91I CCANNNNNTGG 2 cut(s) 449, 977
VpaK11BI GGWCC 2 cut(s) 180, 452
XapI RAATTY 1 cut(s) 523
XceI RCATGY 3 cut(s) 286, 326, 412
XhoI CTCGAG 1 cut(s) 887
XmiI GTMKAC 1 cut(s) 831
XspI CTAG 3 cut(s) 12, 752, 1032
ZrmI AGTACT 1 cut(s) 359
Zsp2I ATGCAT 1 cut(s) 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.