RLG00000029536

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000090
Physical Location & Seq
Reverse (-)
40041648 .. 40043946
2299 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029536

Sequence Viewer

Length: 1263 bp
ATGGATGATGAGCAATCCAATCTAAATGAGAACTGTCATGAACCTATCAAGAAGGCGCTTGGCATTACAAAGAATAAGTTGGGAACTCCTGCTGTGATCAATCCAAAACTGAAGCGAGTTCAAATCCCAATGGACAATGAGGAGTGTATTCCAAATGAGAATTCTAACCCTCCTTTAGATCCAGAACCTGTAAAGAAGACCCGTGGCATTACAGTAGGGTTGAAAGCTCATGCTATTGTTAGTGCGACCAAAAAGAGAATTCCAATCAAGATGGACAAGGATCAAAAGCTCCCTGAGACCGTTCAAGCCAATGCTATGTTTGTTAACGAGATTGGGTCATTCACGCGCAAATTAGCTCCACTCAAATTCAAATGGTGGAGAAAAGTACCTAAGGATGCCAAGAATGACATCAAAGAGGCTCTGACAACTAATTTTGAGTTTGATTGGACTGACCCGGAGCTGAGGATATTTGTGGAGAAGAAGATGGCCAAGGCATTTGGATCTTGGAGATCCAAGTTACATGGACATTTTAAAAAGTATGCTCATGATTTAGAATATGCTCGAGCACACCCACCCGGAGAAAAGCTCTTTGGTGAAAGATCAATAGATGAATGGGAGTGGCTTTGTGACGAGTTGTTCATAGATGAAACCTATGTGTTAATGCTACAAATCGAAATCAGAAAGAATAATCATTGTGGAGGTTCACGGCCTTACCAAAAACATATGGAAGCTGCACTTAAGAAAGGTAAAAATGTGTCTTTTGTTGAGAATTGGAGCAGTATGCATCAACATCGTGACGGTCAGTGGATCAACAAAGCAGCTGAACAAACTGGGAACAAAATGTTAGCAGAATTGAATCAGACAAAGGAGAAGTTAGCTGAAGTCCTTGGGGCTGCCTCACTTGATGAAATAGAAGTTCCCGTCTCTATGCAGTTGGATATCTTGGCAAATGGTGTTGGGGTTGCAAAGGGTAGAGGCATTCGCGGTCTGGGCTATGGTCCACGGAAGGAACCCGTCCATTATTTTGAGAGTGATAAATCTGCAAATGCTTCCGTGACAGAACAAAAGGTGATTGAGCTGACAGCCACAGTGGAAAAGCTTTTGAGGCATATCAATCACATAGAAGAGCAATTTGCTACTGTTGAAGGGTATACTATTCATCATTCCAGTGATGATGATGATGATGATGATGATGATGATTATGATGATGGGGATGATGATGATGTGAATATCTATGGGGATGAAGATGAGGGTGCAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

421

Amino Acids

47.7

Weight (kDa)

5.37

Isoelectric Point (pI)

36.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 228 - 334 1.6e-07 Plant transposase (Ptta/En/Spm family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1151
AccII CGCG 2 cut(s) 346, 984
AciI CCGC 1 cut(s) 984
AclWI GGATC 5 cut(s) 173, 288, 504, 508, 815
AcoI YGGCCR 1 cut(s) 486
AcsI RAATTY 3 cut(s) 160, 258, 365
AcuI CTGAAG 2 cut(s) 131, 900
AfaI GTAC 1 cut(s) 387
AflII CTTAAG 1 cut(s) 737
AgsI TTSAA 6 cut(s) 122, 223, 305, 370, 856, 1145
AjuI GAANNNNNNNTTGG 4 cut(s) 145, 177, 573, 605
Alw21I GWGCWC 1 cut(s) 568
Alw26I GTCTC 2 cut(s) 290, 928
AlwI GGATC 5 cut(s) 173, 288, 504, 508, 815
AlwNI CAGNNNCTG 1 cut(s) 188
Ama87I CYCGRG 1 cut(s) 561
AoxI GGCC 2 cut(s) 486, 707
ApeKI GCWGC 3 cut(s) 731, 818, 893
ApoI RAATTY 3 cut(s) 160, 258, 365
AspLEI GCGC 2 cut(s) 58, 348
AspS9I GGNCC 1 cut(s) 998
AsuC2I CCSGG 2 cut(s) 455, 576
AsuHPI GGTGA 2 cut(s) 605, 1081
AvaI CYCGRG 1 cut(s) 561
AvaII GGWCC 1 cut(s) 998
AxyI CCTNAGG 1 cut(s) 390
BalI TGGCCA 1 cut(s) 488
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 568
BbvCI CCTCAGC 1 cut(s) 461
BbvI GCAGC 3 cut(s) 718, 830, 880
BccI CCATC 3 cut(s) 265, 478, 1202
BceAI ACGGC 1 cut(s) 722
BcgI CGANNNNNNTGC 2 cut(s) 773, 807
BclI TGATCA 1 cut(s) 96
BcnI CCSGG 2 cut(s) 455, 576
BcoDI GTCTC 2 cut(s) 290, 928
BfaI CTAG 1 cut(s) 1261
BfoI RGCGCY 1 cut(s) 59
BfrI CTTAAG 1 cut(s) 737
BisI GCNGC 3 cut(s) 732, 819, 894
BlsI GCNGC 3 cut(s) 733, 820, 895
Bme1390I CCNGG 2 cut(s) 455, 576
Bme18I GGWCC 1 cut(s) 998
BmeT110I CYCGRG 1 cut(s) 561
BmgT120I GGNCC 1 cut(s) 998
BmiI GGNNCC 1 cut(s) 1011
BmrFI CCNGG 2 cut(s) 455, 576
BmrI ACTGGG 1 cut(s) 840
BmsI GCATC 2 cut(s) 385, 793
BmuI ACTGGG 1 cut(s) 840
BpiI GAAGAC 1 cut(s) 203
BplI GAGNNNNNCTC 2 cut(s) 570, 602
Bpu10I CCTNAGC 1 cut(s) 461
BpuMI CCSGG 2 cut(s) 455, 576
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 4 cut(s) 202, 489, 886, 1001
Bse1I ACTGG 2 cut(s) 835, 1167
Bse21I CCTNAGG 1 cut(s) 390
BseDI CCNNGG 4 cut(s) 202, 489, 886, 1001
BseGI GGATG 4 cut(s) 10, 400, 1219, 1246
BseMII CTCAG 2 cut(s) 285, 452
BseNI ACTGG 2 cut(s) 835, 1167
BseRI GAGGAG 1 cut(s) 155
BseXI GCAGC 3 cut(s) 718, 830, 880
BsgI GTGCAG 1 cut(s) 717
Bsh1236I CGCG 2 cut(s) 346, 984
BshFI GGCC 2 cut(s) 488, 709
BsiHKAI GWGCWC 1 cut(s) 568
BsiHKCI CYCGRG 1 cut(s) 561
BsiSI CCGG 2 cut(s) 455, 576
BsmAI GTCTC 2 cut(s) 290, 928
BsmBI CGTCTC 1 cut(s) 928
BsmI GAATGC 1 cut(s) 978
BsnI GGCC 2 cut(s) 488, 709
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 1 cut(s) 561
Bsp1286I GDGCHC 1 cut(s) 568
Bsp143I GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
BspACI CCGC 1 cut(s) 984
BspANI GGCC 2 cut(s) 488, 709
BspCNI CTCAG 2 cut(s) 286, 453
BspFNI CGCG 2 cut(s) 346, 984
BspHI TCATGA 2 cut(s) 37, 544
BspLI GGNNCC 1 cut(s) 1011
BspPI GGATC 5 cut(s) 173, 288, 504, 508, 815
BspQI GCTCTTC 1 cut(s) 1119
BspTI CTTAAG 1 cut(s) 737
BspTNI GGTCTC 1 cut(s) 290
BsrI ACTGG 2 cut(s) 835, 1167
BssECI CCNNGG 4 cut(s) 202, 489, 886, 1001
BssMI GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
BssNAI GTATAC 1 cut(s) 1152
BssT1I CCWWGG 2 cut(s) 489, 886
Bst1107I GTATAC 1 cut(s) 1152
Bst4CI ACNGT 6 cut(s) 35, 214, 301, 800, 1090, 1141
Bst6I CTCTTC 1 cut(s) 1119
BstAFI CTTAAG 1 cut(s) 737
BstDEI CTNAG 3 cut(s) 294, 390, 461
BstDSI CCRYGG 2 cut(s) 202, 1001
BstF5I GGATG 4 cut(s) 10, 400, 1219, 1246
BstFNI CGCG 2 cut(s) 346, 984
BstH2I RGCGCY 1 cut(s) 59
BstHHI GCGC 2 cut(s) 58, 348
BstKTI GATC 7 cut(s) 99, 181, 283, 503, 512, 602, 810
BstMAI GTCTC 2 cut(s) 290, 928
BstMBI GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
BstMWI GCNNNNNNNGC 2 cut(s) 990, 1105
BstSCI CCNGG 2 cut(s) 453, 574
BstUI CGCG 2 cut(s) 346, 984
BstV1I GCAGC 3 cut(s) 718, 830, 880
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 3 cut(s) 178, 500, 509
BstYI RGATCY 3 cut(s) 178, 500, 509
BstZ17I GTATAC 1 cut(s) 1152
Bsu36I CCTNAGG 1 cut(s) 390
BsuRI GGCC 2 cut(s) 488, 709
BtgI CCRYGG 2 cut(s) 202, 1001
BtsCI GGATG 4 cut(s) 10, 400, 1219, 1246
BtsIMutI CAGTG 3 cut(s) 809, 1095, 1174
CaiI CAGNNNCTG 1 cut(s) 188
CciI TCATGA 2 cut(s) 37, 544
CfoI GCGC 2 cut(s) 58, 348
Cfr13I GGNCC 1 cut(s) 998
Csp6I GTAC 1 cut(s) 386
CviAII CATG 4 cut(s) 38, 230, 521, 545
CviQI GTAC 1 cut(s) 386
DdeI CTNAG 3 cut(s) 294, 390, 461
DpnI GATC 7 cut(s) 98, 180, 282, 502, 511, 601, 809
DpnII GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
DraI TTTAAA 1 cut(s) 532
EaeI YGGCCR 1 cut(s) 486
Eam1104I CTCTTC 1 cut(s) 1119
EarI CTCTTC 1 cut(s) 1119
Eco130I CCWWGG 2 cut(s) 489, 886
Eco31I GGTCTC 1 cut(s) 290
Eco32I GATATC 1 cut(s) 940
Eco47I GGWCC 1 cut(s) 998
Eco57I CTGAAG 2 cut(s) 131, 900
Eco81I CCTNAGG 1 cut(s) 390
Eco88I CYCGRG 1 cut(s) 561
EcoRI GAATTC 2 cut(s) 160, 258
EcoRV GATATC 1 cut(s) 940
EcoT14I CCWWGG 2 cut(s) 489, 886
EcoT22I ATGCAT 1 cut(s) 786
ErhI CCWWGG 2 cut(s) 489, 886
Esp3I CGTCTC 1 cut(s) 928
FaeI CATG 4 cut(s) 41, 233, 524, 548
FalI AAGNNNNNCTT 2 cut(s) 720, 752
FatI CATG 4 cut(s) 37, 229, 520, 544
FauNDI CATATG 1 cut(s) 723
FbaI TGATCA 1 cut(s) 96
FblI GTMKAC 1 cut(s) 1151
Fnu4HI GCNGC 3 cut(s) 732, 819, 894
FokI GGATG 4 cut(s) 17, 407, 1226, 1253
Fsp4HI GCNGC 3 cut(s) 732, 819, 894
FspBI CTAG 1 cut(s) 1261
GlaI GCGC 2 cut(s) 57, 347
GluI GCNGC 3 cut(s) 732, 819, 894
HaeII RGCGCY 1 cut(s) 59
HaeIII GGCC 2 cut(s) 488, 709
HapII CCGG 2 cut(s) 455, 576
HhaI GCGC 2 cut(s) 58, 348
Hin1II CATG 4 cut(s) 41, 233, 524, 548
Hin6I GCGC 2 cut(s) 56, 346
HinP1I GCGC 2 cut(s) 56, 346
HincII GTYRAC 1 cut(s) 325
HindII GTYRAC 1 cut(s) 325
HindIII AAGCTT 1 cut(s) 1097
HinfI GANTC 1 cut(s) 856
HpaI GTTAAC 1 cut(s) 325
HpaII CCGG 2 cut(s) 455, 576
HphI GGTGA 2 cut(s) 605, 1081
Hpy166II GTNNAC 4 cut(s) 325, 704, 1001, 1152
Hpy188I TCNGA 3 cut(s) 423, 680, 861
Hpy188III TCNNGA 6 cut(s) 38, 49, 182, 268, 545, 794
Hpy8I GTNNAC 4 cut(s) 325, 704, 1001, 1152
HpyAV CCTTC 3 cut(s) 46, 1000, 1139
HpyCH4III ACNGT 6 cut(s) 35, 214, 301, 800, 1090, 1141
HpyCH4V TGCA 6 cut(s) 734, 784, 931, 965, 1043, 1256
HpyF10VI GCNNNNNNNGC 2 cut(s) 990, 1105
HpyF3I CTNAG 3 cut(s) 294, 390, 461
Hsp92II CATG 4 cut(s) 41, 233, 524, 548
HspAI GCGC 2 cut(s) 56, 346
Ksp22I TGATCA 1 cut(s) 96
KspAI GTTAAC 1 cut(s) 325
Kzo9I GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
LguI GCTCTTC 1 cut(s) 1119
LmnI GCTCC 4 cut(s) 294, 361, 457, 774
LpnPI CCDG 9 cut(s) 102, 195, 201, 306, 468, 589, 816, 974, 1180
Lsp1109I GCAGC 3 cut(s) 718, 830, 880
LweI GCATC 2 cut(s) 385, 793
MaeI CTAG 1 cut(s) 1261
MaeIII GTNAC 4 cut(s) 516, 626, 794, 1054
MalI GATC 7 cut(s) 98, 180, 282, 502, 511, 601, 809
MboI GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
MboII GAAGA 5 cut(s) 208, 490, 493, 1136, 1256
MflI RGATCY 3 cut(s) 178, 500, 509
MhlI GDGCHC 1 cut(s) 568
MlsI TGGCCA 1 cut(s) 488
MluCI AATT 8 cut(s) 160, 258, 350, 365, 430, 769, 851, 1130
MluNI TGGCCA 1 cut(s) 488
MmeI TCCRAC 1 cut(s) 915
MnlI CCTC 9 cut(s) 133, 180, 409, 456, 692, 907, 968, 1098, 1243
Mox20I TGGCCA 1 cut(s) 488
Mph1103I ATGCAT 1 cut(s) 786
MscI TGGCCA 1 cut(s) 488
MseI TTAA 4 cut(s) 324, 531, 659, 738
MslI CAYNNNNRTG 1 cut(s) 1167
Msp20I TGGCCA 1 cut(s) 488
MspA1I CMGCKG 1 cut(s) 821
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 2 cut(s) 455, 576
MspR9I CCNGG 2 cut(s) 455, 576
Mva1269I GAATGC 1 cut(s) 978
MvnI CGCG 2 cut(s) 346, 984
MwoI GCNNNNNNNGC 2 cut(s) 990, 1105
NciI CCSGG 2 cut(s) 455, 576
NdeI CATATG 1 cut(s) 723
NdeII GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
NlaIII CATG 4 cut(s) 41, 233, 524, 548
NlaIV GGNNCC 1 cut(s) 1011
NmuCI GTSAC 3 cut(s) 626, 794, 1054
NsiI ATGCAT 1 cut(s) 786
PaeR7I CTCGAG 1 cut(s) 561
PagI TCATGA 2 cut(s) 37, 544
PciSI GCTCTTC 1 cut(s) 1119
PctI GAATGC 1 cut(s) 978
PfeI GAWTC 1 cut(s) 856
PkrI GCNGC 3 cut(s) 733, 820, 895
PspN4I GGNNCC 1 cut(s) 1011
PspPI GGNCC 1 cut(s) 998
PspXI VCTCGAGB 1 cut(s) 561
PstNI CAGNNNCTG 1 cut(s) 188
PsuI RGATCY 3 cut(s) 178, 500, 509
PvuII CAGCTG 1 cut(s) 821
RsaI GTAC 1 cut(s) 387
RsaNI GTAC 1 cut(s) 386
RseI CAYNNNNRTG 1 cut(s) 1167
SapI GCTCTTC 1 cut(s) 1119
SaqAI TTAA 4 cut(s) 324, 531, 659, 738
SatI GCNGC 3 cut(s) 732, 819, 894
Sau3AI GATC 7 cut(s) 96, 178, 280, 500, 509, 599, 807
Sau96I GGNCC 1 cut(s) 998
ScrFI CCNGG 2 cut(s) 455, 576
SduI GDGCHC 1 cut(s) 568
SfaNI GCATC 2 cut(s) 385, 793
Sfr274I CTCGAG 1 cut(s) 561
SinI GGWCC 1 cut(s) 998
SlaI CTCGAG 1 cut(s) 561
SmiMI CAYNNNNRTG 1 cut(s) 1167
SmlI CTYRAG 2 cut(s) 561, 737
SmoI CTYRAG 2 cut(s) 561, 737
Sse9I AATT 8 cut(s) 160, 258, 350, 365, 430, 769, 851, 1130
SsiI CCGC 1 cut(s) 984
SspMI CTAG 1 cut(s) 1261
StyD4I CCNGG 2 cut(s) 453, 574
StyI CCWWGG 2 cut(s) 489, 886
TaaI ACNGT 6 cut(s) 35, 214, 301, 800, 1090, 1141
TaqI TCGA 2 cut(s) 562, 672
TasI AATT 8 cut(s) 160, 258, 350, 365, 430, 769, 851, 1130
TfiI GAWTC 1 cut(s) 856
Tru1I TTAA 4 cut(s) 324, 531, 659, 738
Tru9I TTAA 4 cut(s) 324, 531, 659, 738
TscAI CASTG 3 cut(s) 809, 1095, 1174
TseFI GTSAC 3 cut(s) 626, 794, 1054
TseI GCWGC 3 cut(s) 731, 818, 893
Tsp45I GTSAC 3 cut(s) 626, 794, 1054
TspDTI ATGAA 7 cut(s) 54, 624, 628, 660, 921, 1148, 1257
TspGWI ACGGA 2 cut(s) 1018, 1042
TspRI CASTG 3 cut(s) 809, 1095, 1174
Vha464I CTTAAG 1 cut(s) 737
VpaK11BI GGWCC 1 cut(s) 998
XapI RAATTY 3 cut(s) 160, 258, 365
XhoI CTCGAG 1 cut(s) 561
XmiI GTMKAC 1 cut(s) 1151
XspI CTAG 1 cut(s) 1261
Zsp2I ATGCAT 1 cut(s) 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.