Rorug07G0147000

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
11601447 .. 11607082
5636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0147000.1

Sequence Viewer

Length: 4470 bp
ATGGCGGAAGGTTTCTGGACCTTGTTTTGTGATTGTCCAACTGAGTCTGGAATTGAATGCAGTTCTGACATTGCAGCCATTATCAATCCAGATTCATGTATCAACAATATTGCGGTCATTGCAGTTGATATCTTGCTTCTGTTCATCTTGTTTTGTATCTTCATCTATAGAACATTATCAAAGAAGGTTATAGCGTCATCAGAGTCTTACACCTTCTCTGCTGTGTCAATTGTTTCGGCCACTTTCAATGCCTGTTTGTCTTTGGCCTATCTGGGTTTTGGGATATGGAAAACGATCGAGAAAGTAAATACAGATCAGACTTGTTTACCTCTGCATGGATGGATAGTATTTTTCTTTCAGGGGTTTACTTGGTTGGTGCTGGGATTAACCATAAACCTGAAGAAGCCAAACCCTCCCCAAATTGCGATAACAAAAGTTCTTTCAATTCTTGGCTTTTTTATTGCAGTTTTTCTTTGTGGTTCATCGATTTGGGAAGCAACTCTTGATGAAGCAGTATCGGTTATGATTGTTTTGAACATTCTTTGTTTCCTTGGATCAGTTCTCTTGCTTTTTAGTGCATTTGAGGGATACAATGTTGCTAAAGGTGATCCACAAGTCCATGTTGACGATGCTCTGGACACACCTTTGCTGGGTGCAGAATCGGATATCGCAGGTGAAATCACTTCAAATCATGACATTGTTACTCCTTTTGCAAAAGCTGGTTTATTTAGTATAATGTCATTTTGGTGGTTGAATCCATTACTGAAAAAAGGAAAGGGGAAGATTCTTGAGAATGAAGATATCCCACAGCTGCGACAAGCTGATCAAGCACGAACATTGTACTTGATGTTTACGGAGCAAGTGCAGAAAAGGAAGGAAAGCAGTTCATCTGATGATGACCCTTCTATTTTGTCCACAATTTTTTTCTGCCAGAGGAAAGCTATATTAATTTCTGGTATATTTGCACTCATCAAGGTTCTCACACTGACTAGCGGTCCTCTGTTTCTGATGGCCTTCATTAGTGTCGTTGAAGGAGAAGCAGCTTTTGAAGGTGAAGGCTATGCACTGACAGCTGGTCTCTTTGTGGTTAAGGTCGTGGAGTCATTGTCAGAGAGGCAATGGTTCTTCAGAACTAGACTTATTGGTCTCCAGGTAAGATCACTGATATCTGTAGCAATATATCAGAAGCAACTAAGACTCTCAAATGCTGCCAAGATGACTCATTCTCCTGGTGAGATAGTGAATTATGTGAGCGTGGATGCTTATAGAATCGGTGAATTTCCATTCTGGTTTCATCAGATATGGTCCACAAGCCTTCAGCTCTGTCTCTCATTACTTATTGTTTACTTCTCTGTTGGAATAGCAACTCTCGCAGCTCTAACTGTGCTCATATTGATTGTGCTGGGAAGCTCTCCATTGGTCAAGTTGCAGCATGATTATCTAACAAAGTTCATGGTAGCTCAAAATAAGAGGCTGAAGGCCATAACAGAAGCACTATCGAATATGAAGATCTTAAAGCTGTATTCATGGGAGACAAATTTCAAGCAAGTCATAGAGGGGTTAAGAGCAGAAGAACTCAAATGGATAAATAAAGTACTGTTACATAAGGGGTATAATATCACTTTGTTCTGGTCATCTCCTATTTTGGTAGCAGCCGTTACCTTTTGGACGTGCTACTTCCTGGGAATTACACTCACTGCTAGTAATGTTTTCACATTTCTAGCAACTTTGCGTATTGTTCAGGAGCCAATTAGGCTTATCCCAGATATTTTTGGATCATTTATTGAAGCCAAGGTCTCATTCTTGCGCATTGTGAAGTTCCTTGATGCACAGGAGTTGGAGAACAGAGATACAAGGAAAGAGAATATTGGCAAAGAGGCTGAGCATTCCATTTTCATTAGAGCCTCCGAAATTTCATGGGACACTGATGCAACCAAGGCCACATTAAGGAACTTGAACTTGGTGGTTGAACCAGGAGAAAAAGTAGCTCTTTGTGGAGAGGTTGGCTCCGGTAAATCAACCCTTTTAGCTGCAATTCTAGGAGAAGTTCCCCTTATCAATGGTATTGTTCAAGTGCATGGGAAGATAGCATATGTTCCTCAATCGGCATGGATTCAAACAGGAAGTATACAAGAAAATATTCTGTTTGGATCCACCATGGATCATGTCAGGTACCAAGAGACGCTTGATAAGTGTTCGTTAGTTAAGGATCTAGAGATCCTTCCATTTGGAGATCTCACTCAGATAGGAGAAAGAGGTGTCAATCTAAGTGGTGGCCAAAAGCAGCGCATTCAACTTGCACGTGCCCTCTATCAAAATGCTGATGTCTATCTCTTGGATGACCCTTTCAGTGCAGTTGATGCTCATACTGCAAGCAGCCTATTCAATGATTATGTCATGGGAGCTCTGGCAAAGAAGACGGTGTTGCTTGTGACACATCAAGTCGACTTCCTTCCGGGTTTTAGTTCTATTTTGTTGATGTCTTCAGGGAAAATTTTAAGGGCAGGACCTTACAAAGAGTTGCTGGCTTCTTGTCAAGAGTTCCAAGACCTTGTCAATGCACATAATGACACTGCTGGTTCCGAGAGTCAAGTTGAATATGCTGCTACTAGAAAACATAAAGCATCTGCCGAGGAGGTTGAAAAAGTTAATACTGAGGTACAGTTCAAAGAATCTTCAGGAGATCAATTGATTAAAAAAGAAGAGAGAGAAACAGGAGACACTGGTTTCAAGCCATACATTCAGTATTTGAAGCATAGCAAGGGATTTTTGCACTTCTTCTCATCAATCTTTTTCCACGTAATATTCATACTGGGGCAATTAGTACAGGCTTATTGGTTGGCTTCGAATCTTCAGGATTATAAGGTGTCAAGAGTCGAGCTCTTCGGAGTTTATTCATTGATCATGTGTATCATTTCATTCTGTTTGCTTCTACGCTCTCTTAAGGTAGTCCAATTAGGATGTGGAGCATCAAGATCCATTTTCTTTACACTACTGAACTCCCTTTTCCGAGCACCAATGCTGTTTTACGATTCAACACCTCTGGGGAGGATACTTAGTCGAGTATCTCTAGATATGAATATCATTGACCTTGAAGTAGCTTTAAAGCTATCCGTAGCTGTTGGGACAACTCTGAACGCTTATAGCATATTCTTAGTAATGATTTATCTTACTTGGCCACTCGTGTTTCTGATTATACCGACACTTTATGCTACCTTTCGCATTCAGAATTACTACTTTTCATCTGCAAAAGAATTAATGCGAATGAATGGCACGACTAAGTCTGCACTTGCAAGCCACATTTCTGAATCTATTGCTGGAGCCGTGACAATCAGAGCTTTTGGAGAGGAGGAAAGATTTTTCTCCAAAAACTTGGAATTCATTGATGCAAATTCTAGTGCTGACTTCAATAGCTTTTCAACAAATGAATGGTTAATTCAACGTCTAGAATTGCTTAGCGCCATTGTTCTCTCAGCCTCAACACTTGCCATTACTATGACTCAATTCGATGCTTCTTCCTCTGGATTTATTGGGATGACACTATCATATGGCCTTTCATTAAATGTATTCCTAGTAATTTCTGTCCAATTTCAGTGCATGCTAGCAAATTCAATAATTTCTGTAGAAAGGGTGGAACAATACATGCACATTCCCAGCGAAGCCGAAGAAGTAATAGAAGAAAACCGACCTGCACACAATTGGCCTATTGTTGGTAAAGTGGAAATACATGACTTAAAGGTAAGATATAGGCCAAATTCTCCTTTTGTTCTCCACGGGATAAATTGCATCATTGAGGGAGGCTACAAAATTGGAATTGTTGGCCGGACTGGAAGTGGAAAGACAACTCTTGTCAGCGTTTTGTTTCGTCTGGTAGAGCCAACAGAGGGAAAAGTCATTGTAGATGGCTATGACATTTGTACAATTGGCCTTCATGATTTGAGATCACGGTTTGGGATCATCCCTCAAGATCCAACATTATTCAGTGGGTCTGTGAGATTCAATCTGGACCCCTTATCAGAGCATACTGATCGTGAGATATGGGAGGTTCTTGAGAAATGTCAGTTACGAGAGGCCATCAGAGAAAAAGAAGAGGGCTTGGATTCTTTAGTTGTGGAAGATGGAACAAACTGGAGCATGGGACAGCGACAGCTATTCTGCTTGGGGCGCGCTTTATTGAAGAGGAGCCGAATACTAGTGCTGGATGAAGCTACTGCATCGATGGACAATACAACAGACTCTATTCTGCAGAAAACTATAAGTGCGGAATTTGTAGACTCCACTGTTATAACAGTGGCCCATAGGATACCAACCGTGATGGACTGCACTAAGGTGCTTGCTCTTAGTGATGGTAAAGTAGTGGAGTATGATGAGCCAATTAAGCTGATGAACAATGAGGGATCACTGTTCGGGCAGCTTGTCAAGGAATATTGGTCTCGTTCTGCCAAAGCTAGTATGCACTCAGAGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1489

Amino Acids

166.0

Weight (kDa)

5.68

Isoelectric Point (pI)

33.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABCC10_N PF24358 3 - 198 5.1e-67 ABCC10 N-terminal domain
ABC_membrane PF00664 315 - 583 5.6e-25 ABC transporter transmembrane region
ABC_tran PF00005 649 - 783 2.4e-22 ABC transporter
ABC_membrane PF00664 926 - 1180 1.1e-24 ABC transporter transmembrane region
ABC_tran PF00005 1257 - 1405 1.3e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2862, 4286
AarI CACCTGC 1 cut(s) 662
AasI GACNNNNNNGTC 1 cut(s) 1143
Acc16I TGCGCA 1 cut(s) 1808
Acc36I ACCTGC 2 cut(s) 662, 3697
Acc65I GGTACC 1 cut(s) 2172
AccB1I GGYRCC 1 cut(s) 2172
AccI GTMKAC 3 cut(s) 2128, 2445, 4272
AccII CGCG 1 cut(s) 4167
AciI CCGC 4 cut(s) 5, 113, 993, 4262
AcoI YGGCCR 4 cut(s) 237, 2275, 3176, 3820
AcsI RAATTY 9 cut(s) 1277, 1537, 1911, 2493, 3377, 3391, 3607, 3754, 4265
AcuI CTGAAG 7 cut(s) 419, 1111, 1301, 1496, 2469, 2661, 2837
AcvI CACGTG 1 cut(s) 2303
AfaI GTAC 6 cut(s) 842, 1596, 2174, 2661, 2826, 3919
AfiI CCNNNNNNNGG 5 cut(s) 335, 650, 1947, 3710, 3884
AflII CTTAAG 1 cut(s) 2942
AhdI GACNNNNNGTC 2 cut(s) 993, 1074
AhlI ACTAGT 1 cut(s) 4192
AjiI CACGTC 1 cut(s) 1671
AjnI CCWGG 4 cut(s) 1149, 1228, 1680, 1972
AjuI GAANNNNNNNTTGG 4 cut(s) 1784, 1816, 1943, 1975
AleI CACNNNNGTG 1 cut(s) 4328
Alw21I GWGCWC 4 cut(s) 1389, 2407, 2883, 3016
Alw26I GTCTC 8 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 2712, 4437
ApoI RAATTY 9 cut(s) 1277, 1537, 1911, 2493, 3377, 3391, 3607, 3754, 4265
AseI ATTAAT 2 cut(s) 947, 3257
Asp700I GAANNNNTTC 1 cut(s) 2139
Asp718I GGTACC 1 cut(s) 2172
AspLEI GCGC 5 cut(s) 1809, 2289, 3461, 4167, 4169
AspS9I GGNCC 6 cut(s) 18, 995, 1305, 2507, 4006, 4294
AsuC2I CCSGG 1 cut(s) 2457
AsuHPI GGTGA 5 cut(s) 617, 686, 1064, 1244, 1286
AsuII TTCGAA 1 cut(s) 2846
AsuNHI GCTAGC 1 cut(s) 3601
AvaII GGWCC 5 cut(s) 18, 995, 1305, 2507, 4006
BaeGI GKGCMC 1 cut(s) 2308
BalI TGGCCA 2 cut(s) 2277, 3178
BamHI GGATCC 1 cut(s) 2150
BanI GGYRCC 1 cut(s) 2172
BanII GRGCYC 2 cut(s) 2407, 2883
BauI CACGAG 1 cut(s) 3182
BbrPI CACGTG 1 cut(s) 2303
BbsI GAAGAC 2 cut(s) 2423, 2475
Bbv12I GWGCWC 4 cut(s) 1389, 2407, 2883, 3016
BccI CCATC 8 cut(s) 333, 1003, 3896, 4082, 4112, 4213, 4309, 4340
BceAI ACGGC 2 cut(s) 1640, 3308
BcgI CGANNNNNNTGC 2 cut(s) 4010, 4044
BciT130I CCWGG 4 cut(s) 1151, 1230, 1682, 1974
BciVI GTATCC 3 cut(s) 581, 3045, 4296
BclI TGATCA 2 cut(s) 823, 2901
BcnI CCSGG 1 cut(s) 2457
BcoDI GTCTC 8 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 2712, 4437
BcuI ACTAGT 1 cut(s) 4192
BfmI CTRYAG 4 cut(s) 166, 1170, 3621, 4244
BfoI RGCGCY 1 cut(s) 3462
BfrI CTTAAG 1 cut(s) 2942
BfuAI ACCTGC 2 cut(s) 662, 3697
BfuI GTATCC 3 cut(s) 581, 3045, 4296
BglI GCCNNNNNGGC 1 cut(s) 1753
BglII AGATCT 2 cut(s) 1509, 2233
BlpI GCTNAGC 2 cut(s) 1881, 3455
BmcAI AGTACT 1 cut(s) 1596
Bme1390I CCNGG 5 cut(s) 1151, 1230, 1682, 1974, 2457
Bme18I GGWCC 5 cut(s) 18, 995, 1305, 2507, 4006
BmeRI GACNNNNNGTC 2 cut(s) 993, 1074
BmgBI CACGTC 1 cut(s) 1671
BmgT120I GGNCC 6 cut(s) 18, 995, 1305, 2507, 4006, 4294
BmiI GGNNCC 8 cut(s) 1746, 2008, 2152, 2174, 2581, 3322, 4008, 4184
BmrFI CCNGG 5 cut(s) 1151, 1230, 1682, 1974, 2457
BmrI ACTGGG 1 cut(s) 2822
BmtI GCTAGC 1 cut(s) 3605
BmuI ACTGGG 1 cut(s) 2822
BpiI GAAGAC 2 cut(s) 2423, 2475
BplI GAGNNNNNCTC 4 cut(s) 1991, 2023, 2865, 2897
BpmI CTGGAG 3 cut(s) 1133, 3339, 4150
Bpu1102I GCTNAGC 2 cut(s) 1881, 3455
Bpu14I TTCGAA 1 cut(s) 2846
BpuEI CTTGAG 3 cut(s) 809, 3948, 4070
BpuMI CCSGG 1 cut(s) 2457
Bsa29I ATCGAT 2 cut(s) 485, 4217
BsaAI YACGTR 2 cut(s) 2303, 2800
BsaBI GATNNNNATC 1 cut(s) 2328
BsaI GGTCTC 4 cut(s) 1082, 1151, 1801, 4437
BsaJI CCNNGG 7 cut(s) 550, 1681, 1791, 1935, 2157, 2631, 3772
BsaWI WCCGGW 1 cut(s) 2009
BsaXI ACNNNNNCTCC 6 cut(s) 1091, 1121, 1210, 1240, 1968, 1998
Bsc4I CCNNNNNNNGG 5 cut(s) 335, 650, 1947, 3710, 3884
Bse1I ACTGG 4 cut(s) 2728, 2817, 3832, 4133
Bse3DI GCAATG 3 cut(s) 69, 117, 1124
Bse8I GATNNNNATC 1 cut(s) 2328
BseBI CCWGG 4 cut(s) 1151, 1230, 1682, 1974
BseCI ATCGAT 2 cut(s) 485, 4217
BseDI CCNNGG 7 cut(s) 550, 1681, 1791, 1935, 2157, 2631, 3772
BseGI GGATG 7 cut(s) 344, 1264, 2344, 2966, 3540, 3957, 4207
BseJI GATNNNNATC 1 cut(s) 2328
BseLI CCNNNNNNNGG 5 cut(s) 335, 650, 1947, 3710, 3884
BseMI GCAATG 3 cut(s) 69, 117, 1124
BseMII CTCAG 5 cut(s) 33, 1872, 2255, 2646, 3486
BseNI ACTGG 4 cut(s) 2728, 2817, 3832, 4133
BsePI GCGCGC 1 cut(s) 4165
BseRI GAGGAG 3 cut(s) 2648, 3362, 4195
BseSI GKGCMC 1 cut(s) 2308
BseYI CCCAGC 4 cut(s) 379, 649, 1402, 3653
BsgI GTGCAG 6 cut(s) 675, 884, 2373, 3270, 3675, 4306
Bsh1236I CGCG 1 cut(s) 4167
Bsh1285I CGRYCG 1 cut(s) 297
BshNI GGYRCC 1 cut(s) 2172
BshVI ATCGAT 2 cut(s) 485, 4217
BsiEI CGRYCG 1 cut(s) 297
BsiHKAI GWGCWC 4 cut(s) 1389, 2407, 2883, 3016
BsiSI CCGG 3 cut(s) 2010, 2456, 3823
BslFI GGGAC 3 cut(s) 1934, 3139, 4152
BslI CCNNNNNNNGG 5 cut(s) 335, 650, 1947, 3710, 3884
BsmAI GTCTC 8 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 2712, 4437
BsmBI CGTCTC 1 cut(s) 2174
BsmFI GGGAC 3 cut(s) 1934, 3139, 4152
BsmI GAATGC 4 cut(s) 62, 1885, 2289, 3222
Bso31I GGTCTC 4 cut(s) 1082, 1151, 1801, 4437
Bsp119I TTCGAA 1 cut(s) 2846
Bsp1286I GDGCHC 5 cut(s) 1389, 2308, 2407, 2883, 3016
Bsp1407I TGTACA 1 cut(s) 3917
Bsp1720I GCTNAGC 2 cut(s) 1881, 3455
Bsp19I CCATGG 1 cut(s) 2157
BspACI CCGC 4 cut(s) 5, 113, 993, 4262
BspCNI CTCAG 5 cut(s) 34, 1873, 2254, 2647, 3485
BspDI ATCGAT 2 cut(s) 485, 4217
BspFNI CGCG 1 cut(s) 4167
BspHI TCATGA 2 cut(s) 691, 3931
BspLI GGNNCC 8 cut(s) 1746, 2008, 2152, 2174, 2581, 3322, 4008, 4184
BspMAI CTGCAG 1 cut(s) 4248
BspMI ACCTGC 2 cut(s) 662, 3697
BspOI GCTAGC 1 cut(s) 3605
BspQI GCTCTTC 1 cut(s) 2888
BspT104I TTCGAA 1 cut(s) 2846
BspT107I GGYRCC 1 cut(s) 2172
BspTI CTTAAG 1 cut(s) 2942
BspTNI GGTCTC 4 cut(s) 1082, 1151, 1801, 4437
BsrDI GCAATG 3 cut(s) 69, 117, 1124
BsrGI TGTACA 1 cut(s) 3917
BsrI ACTGG 4 cut(s) 2728, 2817, 3832, 4133
BssECI CCNNGG 7 cut(s) 550, 1681, 1791, 1935, 2157, 2631, 3772
BssHII GCGCGC 1 cut(s) 4165
BssNAI GTATAC 1 cut(s) 2129
BssSI CACGAG 1 cut(s) 3182
BssT1I CCWWGG 4 cut(s) 550, 1791, 1935, 2157
Bst1107I GTATAC 1 cut(s) 2129
Bst2BI CACGAG 1 cut(s) 3182
Bst2UI CCWGG 4 cut(s) 1151, 1230, 1682, 1974
Bst4CI ACNGT 9 cut(s) 1384, 1599, 2422, 2664, 3948, 4282, 4291, 4312, 4404
Bst6I CTCTTC 4 cut(s) 2697, 2888, 4083, 4172
BstAFI CTTAAG 1 cut(s) 2942
BstAPI GCANNNNNTGC 1 cut(s) 2360
BstAUI TGTACA 1 cut(s) 3917
BstBAI YACGTR 2 cut(s) 2303, 2800
BstBI TTCGAA 1 cut(s) 2846
BstC8I GCNNGC 7 cut(s) 2374, 2526, 3295, 3599, 3603, 4167, 4335
BstDSI CCRYGG 2 cut(s) 2157, 3772
BstF5I GGATG 7 cut(s) 344, 1264, 2344, 2966, 3540, 3957, 4207
BstFNI CGCG 1 cut(s) 4167
BstH2I RGCGCY 1 cut(s) 3462
BstHHI GCGC 5 cut(s) 1809, 2289, 3461, 4167, 4169
BstMAI GTCTC 8 cut(s) 1082, 1151, 1331, 1526, 1801, 2174, 2712, 4437
BstMCI CGRYCG 1 cut(s) 297
BstNI CCWGG 4 cut(s) 1151, 1230, 1682, 1974
BstNSI RCATGY 2 cut(s) 3601, 3646
BstSCI CCNGG 5 cut(s) 1149, 1228, 1680, 1972, 2455
BstSFI CTRYAG 4 cut(s) 166, 1170, 3621, 4244
BstSLI GKGCMC 1 cut(s) 2308
BstUI CGCG 1 cut(s) 4167
BstV2I GAAGAC 2 cut(s) 2423, 2475
BstX2I RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2975, 3967
BstXI CCANNNNNNTGG 1 cut(s) 3373
BstYI RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2975, 3967
BstZ17I GTATAC 1 cut(s) 2129
Bsu15I ATCGAT 2 cut(s) 485, 4217
BsuI GTATCC 3 cut(s) 581, 3045, 4296
BsuTUI ATCGAT 2 cut(s) 485, 4217
BtgI CCRYGG 2 cut(s) 2157, 3772
BtrI CACGTC 1 cut(s) 1671
BtsCI GGATG 7 cut(s) 344, 1264, 2344, 2966, 3540, 3957, 4207
BtsI GCAGTG 2 cut(s) 1695, 2571
BveI ACCTGC 2 cut(s) 662, 3697
Cac8I GCNNGC 7 cut(s) 2374, 2526, 3295, 3599, 3603, 4167, 4335
CciI TCATGA 2 cut(s) 691, 3931
CfoI GCGC 5 cut(s) 1809, 2289, 3461, 4167, 4169
Cfr13I GGNCC 6 cut(s) 18, 995, 1305, 2507, 4006, 4294
ClaI ATCGAT 2 cut(s) 485, 4217
CseI GACGC 2 cut(s) 183, 2191
Csp6I GTAC 6 cut(s) 841, 1595, 2173, 2660, 2825, 3918
CspCI CAANNNNNGTGG 2 cut(s) 2251, 2286
CviQI GTAC 6 cut(s) 841, 1595, 2173, 2660, 2825, 3918
DraI TTTAAA 1 cut(s) 3105
DrdI GACNNNNNNGTC 1 cut(s) 1143
DriI GACNNNNNGTC 2 cut(s) 993, 1074
DseDI GACNNNNNNGTC 1 cut(s) 1143
EaeI YGGCCR 4 cut(s) 237, 2275, 3176, 3820
Eam1104I CTCTTC 4 cut(s) 2697, 2888, 4083, 4172
Eam1105I GACNNNNNGTC 2 cut(s) 993, 1074
EarI CTCTTC 4 cut(s) 2697, 2888, 4083, 4172
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 2405, 2881
Eco130I CCWWGG 4 cut(s) 550, 1791, 1935, 2157
Eco24I GRGCYC 2 cut(s) 2407, 2883
Eco31I GGTCTC 4 cut(s) 1082, 1151, 1801, 4437
Eco32I GATATC 4 cut(s) 130, 667, 802, 1167
Eco47I GGWCC 5 cut(s) 18, 995, 1305, 2507, 4006
Eco53kI GAGCTC 2 cut(s) 2405, 2881
Eco57I CTGAAG 7 cut(s) 419, 1111, 1301, 1496, 2469, 2661, 2837
Eco72I CACGTG 1 cut(s) 2303
EcoICRI GAGCTC 2 cut(s) 2405, 2881
EcoO109I RGGNCCY 1 cut(s) 2507
EcoRI GAATTC 1 cut(s) 3377
EcoRII CCWGG 4 cut(s) 1149, 1228, 1680, 1972
EcoRV GATATC 4 cut(s) 130, 667, 802, 1167
EcoT14I CCWWGG 4 cut(s) 550, 1791, 1935, 2157
EcoT38I GRGCYC 2 cut(s) 2407, 2883
ErhI CCWWGG 4 cut(s) 550, 1791, 1935, 2157
Esp3I CGTCTC 1 cut(s) 2174
FalI AAGNNNNNCTT 8 cut(s) 486, 518, 1974, 2006, 2037, 2069, 2169, 2201
FaqI GGGAC 3 cut(s) 1934, 3139, 4152
FauNDI CATATG 2 cut(s) 2092, 3547
FbaI TGATCA 2 cut(s) 823, 2901
FblI GTMKAC 3 cut(s) 2128, 2445, 4272
FokI GGATG 7 cut(s) 351, 1271, 2351, 2973, 3547, 3944, 4214
FriOI GRGCYC 2 cut(s) 2407, 2883
FspI TGCGCA 1 cut(s) 1808
GlaI GCGC 5 cut(s) 1808, 2288, 3460, 4166, 4168
GsaI CCCAGC 4 cut(s) 383, 653, 1406, 3657
GsuI CTGGAG 3 cut(s) 1133, 3339, 4150
HaeII RGCGCY 1 cut(s) 3462
HapII CCGG 3 cut(s) 2010, 2456, 3823
HgaI GACGC 2 cut(s) 183, 2191
HhaI GCGC 5 cut(s) 1809, 2289, 3461, 4167, 4169
Hin6I GCGC 5 cut(s) 1807, 2287, 3459, 4165, 4167
HinP1I GCGC 5 cut(s) 1807, 2287, 3459, 4165, 4167
HincII GTYRAC 2 cut(s) 625, 2446
HindII GTYRAC 2 cut(s) 625, 2446
HpaII CCGG 3 cut(s) 2010, 2456, 3823
HphI GGTGA 5 cut(s) 617, 686, 1064, 1244, 1286
HpyCH4III ACNGT 9 cut(s) 1384, 1599, 2422, 2664, 3948, 4282, 4291, 4312, 4404
HpyCH4IV ACGT 4 cut(s) 1670, 2302, 2799, 3442
HpySE526I ACGT 4 cut(s) 1670, 2302, 2799, 3442
HspAI GCGC 5 cut(s) 1807, 2287, 3459, 4165, 4167
KpnI GGTACC 1 cut(s) 2176
Ksp22I TGATCA 2 cut(s) 823, 2901
LguI GCTCTTC 1 cut(s) 2888
LmnI GCTCC 8 cut(s) 856, 1744, 2012, 2402, 2966, 3320, 4131, 4182
MaeII ACGT 4 cut(s) 1670, 2302, 2799, 3442
MaeIII GTNAC 6 cut(s) 700, 1599, 1657, 2431, 3325, 4062
MfeI CAATTG 4 cut(s) 228, 2687, 3697, 3921
MflI RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2975, 3967
MhlI GDGCHC 5 cut(s) 1389, 2308, 2407, 2883, 3016
MlsI TGGCCA 2 cut(s) 2277, 3178
MluNI TGGCCA 2 cut(s) 2277, 3178
MmeI TCCRAC 4 cut(s) 62, 1336, 1818, 3995
Mox20I TGGCCA 2 cut(s) 2277, 3178
MroXI GAANNNNTTC 1 cut(s) 2139
MscI TGGCCA 2 cut(s) 2277, 3178
MslI CAYNNNNRTG 3 cut(s) 745, 3494, 4328
Msp20I TGGCCA 2 cut(s) 2277, 3178
MspA1I CMGCKG 2 cut(s) 811, 1073
MspCI CTTAAG 1 cut(s) 2942
MspI CCGG 3 cut(s) 2010, 2456, 3823
MspR9I CCNGG 5 cut(s) 1151, 1230, 1682, 1974, 2457
MunI CAATTG 4 cut(s) 228, 2687, 3697, 3921
Mva1269I GAATGC 4 cut(s) 62, 1885, 2289, 3222
MvaI CCWGG 4 cut(s) 1151, 1230, 1682, 1974
MvnI CGCG 1 cut(s) 4167
NciI CCSGG 1 cut(s) 2457
NcoI CCATGG 1 cut(s) 2157
NdeI CATATG 2 cut(s) 2092, 3547
NheI GCTAGC 1 cut(s) 3601
NlaIV GGNNCC 8 cut(s) 1746, 2008, 2152, 2174, 2581, 3322, 4008, 4184
NmeAIII GCCGAG 1 cut(s) 2656
NmuCI GTSAC 2 cut(s) 2431, 3325
NsbI TGCGCA 1 cut(s) 1808
NspI RCATGY 2 cut(s) 3601, 3646
NspV TTCGAA 1 cut(s) 2846
OliI CACNNNNGTG 1 cut(s) 4328
PaeI GCATGC 1 cut(s) 3601
PagI TCATGA 2 cut(s) 691, 3931
PaqCI CACCTGC 1 cut(s) 662
PauI GCGCGC 1 cut(s) 4165
PciSI GCTCTTC 1 cut(s) 2888
PctI GAATGC 4 cut(s) 62, 1885, 2289, 3222
PdmI GAANNNNTTC 1 cut(s) 2139
PflFI GACNNNGTC 2 cut(s) 2552, 3280
Ple19I CGATCG 1 cut(s) 297
PmaCI CACGTG 1 cut(s) 2303
PmlI CACGTG 1 cut(s) 2303
Ppu21I YACGTR 2 cut(s) 2303, 2800
PpuMI RGGWCCY 1 cut(s) 2507
PshBI ATTAAT 2 cut(s) 947, 3257
PsiI TTATAA 2 cut(s) 2862, 4286
Psp124BI GAGCTC 2 cut(s) 2407, 2883
Psp5II RGGWCCY 1 cut(s) 2507
Psp6I CCWGG 4 cut(s) 1149, 1228, 1680, 1972
PspCI CACGTG 1 cut(s) 2303
PspFI CCCAGC 4 cut(s) 379, 649, 1402, 3653
PspGI CCWGG 4 cut(s) 1149, 1228, 1680, 1972
PspN4I GGNNCC 8 cut(s) 1746, 2008, 2152, 2174, 2581, 3322, 4008, 4184
PspPI GGNCC 6 cut(s) 18, 995, 1305, 2507, 4006, 4294
PspPPI RGGWCCY 1 cut(s) 2507
PstI CTGCAG 1 cut(s) 4248
PsuI RGATCY 7 cut(s) 1509, 2150, 2209, 2217, 2233, 2975, 3967
PsyI GACNNNGTC 2 cut(s) 2552, 3280
PteI GCGCGC 1 cut(s) 4165
PvuI CGATCG 1 cut(s) 297
PvuII CAGCTG 2 cut(s) 811, 1073
RsaI GTAC 6 cut(s) 842, 1596, 2174, 2661, 2826, 3919
RsaNI GTAC 6 cut(s) 841, 1595, 2173, 2660, 2825, 3918
RseI CAYNNNNRTG 3 cut(s) 745, 3494, 4328
SacI GAGCTC 2 cut(s) 2407, 2883
SalI GTCGAC 1 cut(s) 2444
SapI GCTCTTC 1 cut(s) 2888
Sau96I GGNCC 6 cut(s) 18, 995, 1305, 2507, 4006, 4294
ScaI AGTACT 1 cut(s) 1596
ScrFI CCNGG 5 cut(s) 1151, 1230, 1682, 1974, 2457
SduI GDGCHC 5 cut(s) 1389, 2308, 2407, 2883, 3016
SfcI CTRYAG 4 cut(s) 166, 1170, 3621, 4244
SfuI TTCGAA 1 cut(s) 2846
SinI GGWCC 5 cut(s) 18, 995, 1305, 2507, 4006
SmiMI CAYNNNNRTG 3 cut(s) 745, 3494, 4328
SmlI CTYRAG 4 cut(s) 788, 2942, 3963, 4049
SmoI CTYRAG 4 cut(s) 788, 2942, 3963, 4049
SpeI ACTAGT 1 cut(s) 4192
SphI GCATGC 1 cut(s) 3601
SsiI CCGC 4 cut(s) 5, 113, 993, 4262
SspI AATATT 5 cut(s) 109, 1867, 2140, 2805, 4427
SstI GAGCTC 2 cut(s) 2407, 2883
StyD4I CCNGG 5 cut(s) 1149, 1228, 1680, 1972, 2455
StyI CCWWGG 4 cut(s) 550, 1791, 1935, 2157
TaaI ACNGT 9 cut(s) 1384, 1599, 2422, 2664, 3948, 4282, 4291, 4312, 4404
TaiI ACGT 4 cut(s) 1673, 2305, 2802, 3445
TaqI TCGA 9 cut(s) 297, 485, 1499, 2445, 2846, 2877, 3061, 3507, 4217
TatI WGTACW 4 cut(s) 840, 1594, 2824, 3917
TseFI GTSAC 2 cut(s) 2431, 3325
Tsp45I GTSAC 2 cut(s) 2431, 3325
TspGWI ACGGA 2 cut(s) 869, 3103
Tth111I GACNNNGTC 2 cut(s) 2552, 3280
Vha464I CTTAAG 1 cut(s) 2942
VpaK11BI GGWCC 5 cut(s) 18, 995, 1305, 2507, 4006
VspI ATTAAT 2 cut(s) 947, 3257
XapI RAATTY 9 cut(s) 1277, 1537, 1911, 2493, 3377, 3391, 3607, 3754, 4265
XbaI TCTAGA 3 cut(s) 2212, 3070, 3445
XceI RCATGY 2 cut(s) 3601, 3646
XcmI CCANNNNNNNNNTGG 1 cut(s) 2960
XmiI GTMKAC 3 cut(s) 2128, 2445, 4272
XmnI GAANNNNTTC 1 cut(s) 2139
ZrmI AGTACT 1 cut(s) 1596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.