Rw4G026900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000090
Physical Location & Seq
Reverse (-)
53178201 .. 53179697
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G026900.1

Sequence Viewer

Length: 993 bp
ATGATTGCTAGCAATGGCAACAAGAAGGTGGAGATAATATTTGACCAGGAGCATTGGGTCCCAAATATTGAGTACATCAATAAGAAGTTCACTACCGCTATAGGGATTGAGGTTCGAAGTCGAGCTCCGGTATGTTACCGCGGATGGAATAAGATTTCAGGAGATATTAAGAGGACACTACTAGAGGGATTGACGGTACACTTTGACGTGGAAATAGAACATCCAAAAGTTATCTATTTTGTGGATGATAAGATGCGCCCGGCATATACTCAATTCAAGTGGAAGTTGCACGATCACTACCAAAAATGTGGCACATCTGTTCGGGGAAGAGCCACACTTCCTCCACCTGATCTATGGGGTGAGAGATCGACAGAGGAGTGGCATTGGCTATGTGATGAACTCTACACCGATCCAAAATATATTGATAAATGCAAAAAGAATTCAACTAGCCGAAAGAGACAAAGGAGTACGCATCGTGGCGGAGCTATGCCTTTCATTCAACATGCTTTGAGGACAGCCAAGGTAAATTTTATGAGTTTCGAAGAAGAGCATAAGGAGAAACTAACCCTAGAGGCACCAGAGGGTACTCCAACAGAATCTGTACAAGTTACTGCACGTGATGAGATTCCAATCATGGCTGAAGAGTGTGGAAGGAAGGGAAAAAGAGTTCGTGGTTTAGGCTCGTTTCCTCGCATGGAGCTTCCAACTGTTACATCTTCAACAGCTGTGAGTTCTGAGATGAACGTAATGCAAGATAAAGTTAAGAAGCTTGAATCAACTGTGGACATTATGCGGTCACAAAATGCACAGCTAATGACAATGTTGAAGAAGTTCCTGATGAATAGCCAAGGTTGTTTTGCTGATACAGAAAACATTGACATGAATATCGTAGTACCCAACAGCGAAGAAGATGATGTCTTTGGAAGAGATGAAGACGGTGTCCAAAACAATGGAGATAATTCTGAAACAGAGGATTTGGAGGAAGATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

330

Amino Acids

37.93

Weight (kDa)

5.7

Isoelectric Point (pI)

53.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 574
AccII CGCG 1 cut(s) 141
AciI CCGC 5 cut(s) 96, 139, 141, 480, 793
AclWI GGATC 1 cut(s) 404
AcsI RAATTY 2 cut(s) 439, 526
AcuI CTGAAG 1 cut(s) 660
AcvI CACGTG 1 cut(s) 617
AfaI GTAC 6 cut(s) 74, 198, 469, 586, 603, 894
AfiI CCNNNNNNNGG 1 cut(s) 102
AgsI TTSAA 6 cut(s) 277, 444, 500, 720, 773, 826
AjiI CACGTC 1 cut(s) 208
AjnI CCWGG 1 cut(s) 45
AloI GAACNNNNNNTCC 2 cut(s) 651, 683
AluBI AGCT 6 cut(s) 125, 485, 700, 725, 769, 811
AluI AGCT 6 cut(s) 125, 485, 700, 725, 769, 811
Alw21I GWGCWC 1 cut(s) 127
Alw26I GTCTC 1 cut(s) 451
AlwI GGATC 1 cut(s) 404
AlwNI CAGNNNCTG 1 cut(s) 599
ApoI RAATTY 2 cut(s) 439, 526
Asp700I GAANNNNTTC 1 cut(s) 830
AspLEI GCGC 1 cut(s) 258
AspS9I GGNCC 1 cut(s) 58
AsuC2I CCSGG 1 cut(s) 260
AsuHPI GGTGA 1 cut(s) 371
AsuII TTCGAA 2 cut(s) 115, 540
AsuNHI GCTAGC 1 cut(s) 8
AvaII GGWCC 1 cut(s) 58
BanI GGYRCC 1 cut(s) 574
BanII GRGCYC 1 cut(s) 127
BbrPI CACGTG 1 cut(s) 617
BbsI GAAGAC 1 cut(s) 939
Bbv12I GWGCWC 1 cut(s) 127
BccI CCATC 1 cut(s) 138
BciT130I CCWGG 1 cut(s) 47
BcnI CCSGG 1 cut(s) 260
BcoDI GTCTC 1 cut(s) 451
BfaI CTAG 4 cut(s) 9, 182, 447, 569
BfmI CTRYAG 1 cut(s) 99
Bme1390I CCNGG 2 cut(s) 47, 260
Bme18I GGWCC 1 cut(s) 58
BmgBI CACGTC 1 cut(s) 208
BmgT120I GGNCC 1 cut(s) 58
BmiI GGNNCC 3 cut(s) 59, 60, 576
BmrFI CCNGG 2 cut(s) 47, 260
BmsI GCATC 2 cut(s) 243, 481
BmtI GCTAGC 1 cut(s) 12
BpiI GAAGAC 1 cut(s) 939
Bpu14I TTCGAA 2 cut(s) 115, 540
BpuMI CCSGG 1 cut(s) 260
BsaAI YACGTR 1 cut(s) 617
BsaBI GATNNNNATC 1 cut(s) 629
BsaJI CCNNGG 3 cut(s) 139, 519, 847
BsaWI WCCGGW 1 cut(s) 127
BsaXI ACNNNNNCTCC 2 cut(s) 325, 355
Bsc4I CCNNNNNNNGG 1 cut(s) 102
Bse3DI GCAATG 1 cut(s) 19
Bse8I GATNNNNATC 1 cut(s) 629
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 3 cut(s) 139, 519, 847
BseGI GGATG 3 cut(s) 149, 220, 250
BseJI GATNNNNATC 1 cut(s) 629
BseLI CCNNNNNNNGG 1 cut(s) 102
BseMI GCAATG 1 cut(s) 19
BseMII CTCAG 1 cut(s) 726
BseRI GAGGAG 1 cut(s) 389
BsgI GTGCAG 1 cut(s) 597
Bsh1236I CGCG 1 cut(s) 141
BshNI GGYRCC 1 cut(s) 574
BsiHKAI GWGCWC 1 cut(s) 127
BsiSI CCGG 2 cut(s) 128, 260
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 102
BsmAI GTCTC 1 cut(s) 451
BsmFI GGGAC 1 cut(s) 44
Bsp119I TTCGAA 2 cut(s) 115, 540
Bsp1286I GDGCHC 1 cut(s) 127
Bsp1407I TGTACA 1 cut(s) 601
Bsp143I GATC 4 cut(s) 292, 349, 365, 409
BspACI CCGC 5 cut(s) 96, 139, 141, 480, 793
BspCNI CTCAG 1 cut(s) 727
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 3 cut(s) 59, 60, 576
BspOI GCTAGC 1 cut(s) 12
BspPI GGATC 1 cut(s) 404
BspQI GCTCTTC 2 cut(s) 322, 540
BspT104I TTCGAA 2 cut(s) 115, 540
BspT107I GGYRCC 1 cut(s) 574
BsrDI GCAATG 1 cut(s) 19
BsrGI TGTACA 1 cut(s) 601
BssECI CCNNGG 3 cut(s) 139, 519, 847
BssMI GATC 4 cut(s) 292, 349, 365, 409
BssT1I CCWWGG 2 cut(s) 519, 847
Bst2UI CCWGG 1 cut(s) 47
Bst4CI ACNGT 4 cut(s) 196, 709, 781, 938
Bst6I CTCTTC 4 cut(s) 322, 540, 636, 919
BstAUI TGTACA 1 cut(s) 601
BstBAI YACGTR 1 cut(s) 617
BstBI TTCGAA 2 cut(s) 115, 540
BstC8I GCNNGC 1 cut(s) 10
BstDEI CTNAG 1 cut(s) 735
BstDSI CCRYGG 1 cut(s) 139
BstF5I GGATG 3 cut(s) 149, 220, 250
BstFNI CGCG 1 cut(s) 141
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 4 cut(s) 295, 352, 368, 412
BstMAI GTCTC 1 cut(s) 451
BstMBI GATC 4 cut(s) 292, 349, 365, 409
BstNI CCWGG 1 cut(s) 47
BstNSI RCATGY 1 cut(s) 506
BstSCI CCNGG 2 cut(s) 45, 258
BstSFI CTRYAG 1 cut(s) 99
BstUI CGCG 1 cut(s) 141
BstV2I GAAGAC 1 cut(s) 939
BstXI CCANNNNNNTGG 2 cut(s) 308, 950
BtgI CCRYGG 1 cut(s) 139
BtrI CACGTC 1 cut(s) 208
BtsCI GGATG 3 cut(s) 149, 220, 250
Cac8I GCNNGC 1 cut(s) 10
CaiI CAGNNNCTG 1 cut(s) 599
CfoI GCGC 1 cut(s) 258
Cfr13I GGNCC 1 cut(s) 58
Cfr42I CCGCGG 1 cut(s) 142
Csp6I GTAC 6 cut(s) 73, 197, 468, 585, 602, 893
CspCI CAANNNNNGTGG 2 cut(s) 260, 295
CviAII CATG 4 cut(s) 503, 634, 694, 880
CviQI GTAC 6 cut(s) 73, 197, 468, 585, 602, 893
DdeI CTNAG 1 cut(s) 735
DpnI GATC 4 cut(s) 294, 351, 367, 411
DpnII GATC 4 cut(s) 292, 349, 365, 409
Eam1104I CTCTTC 4 cut(s) 322, 540, 636, 919
EarI CTCTTC 4 cut(s) 322, 540, 636, 919
EciI GGCGGA 1 cut(s) 495
Ecl136II GAGCTC 1 cut(s) 125
Eco130I CCWWGG 2 cut(s) 519, 847
Eco24I GRGCYC 1 cut(s) 127
Eco47I GGWCC 1 cut(s) 58
Eco53kI GAGCTC 1 cut(s) 125
Eco57I CTGAAG 1 cut(s) 660
Eco72I CACGTG 1 cut(s) 617
EcoICRI GAGCTC 1 cut(s) 125
EcoO109I RGGNCCY 1 cut(s) 58
EcoRI GAATTC 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 45
EcoT14I CCWWGG 2 cut(s) 519, 847
EcoT38I GRGCYC 1 cut(s) 127
ErhI CCWWGG 2 cut(s) 519, 847
FaeI CATG 4 cut(s) 506, 637, 697, 883
FaqI GGGAC 1 cut(s) 44
FatI CATG 4 cut(s) 502, 633, 693, 879
FokI GGATG 3 cut(s) 156, 207, 257
FriOI GRGCYC 1 cut(s) 127
FspBI CTAG 4 cut(s) 9, 182, 447, 569
GlaI GCGC 1 cut(s) 257
HapII CCGG 2 cut(s) 128, 260
HhaI GCGC 1 cut(s) 258
Hin1II CATG 4 cut(s) 506, 637, 697, 883
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HindIII AAGCTT 1 cut(s) 767
HinfI GANTC 3 cut(s) 596, 625, 773
HpaII CCGG 2 cut(s) 128, 260
HphI GGTGA 1 cut(s) 371
Hpy166II GTNNAC 3 cut(s) 90, 199, 784
Hpy188I TCNGA 2 cut(s) 736, 964
Hpy188III TCNNGA 2 cut(s) 159, 835
Hpy8I GTNNAC 3 cut(s) 90, 199, 784
HpyAV CCTTC 3 cut(s) 19, 645, 649
HpyCH4III ACNGT 4 cut(s) 196, 709, 781, 938
HpyCH4IV ACGT 3 cut(s) 207, 616, 744
HpyCH4V TGCA 5 cut(s) 289, 432, 614, 751, 806
HpyF3I CTNAG 1 cut(s) 735
HpySE526I ACGT 3 cut(s) 207, 616, 744
Hsp92II CATG 4 cut(s) 506, 637, 697, 883
HspAI GCGC 1 cut(s) 256
KflI GGGWCCC 1 cut(s) 58
KspI CCGCGG 1 cut(s) 142
Kzo9I GATC 4 cut(s) 292, 349, 365, 409
LguI GCTCTTC 2 cut(s) 322, 540
LmnI GCTCC 4 cut(s) 49, 130, 482, 697
LpnPI CCDG 8 cut(s) 32, 59, 141, 144, 273, 360, 591, 848
LweI GCATC 2 cut(s) 243, 481
MaeI CTAG 4 cut(s) 9, 182, 447, 569
MaeII ACGT 3 cut(s) 207, 616, 744
MaeIII GTNAC 4 cut(s) 134, 607, 709, 795
MalI GATC 4 cut(s) 294, 351, 367, 411
MboI GATC 4 cut(s) 292, 349, 365, 409
MhlI GDGCHC 1 cut(s) 127
MluCI AATT 4 cut(s) 272, 439, 526, 958
MmeI TCCRAC 2 cut(s) 614, 728
MroXI GAANNNNTTC 1 cut(s) 830
MseI TTAA 2 cut(s) 168, 762
MslI CAYNNNNRTG 1 cut(s) 878
MspA1I CMGCKG 2 cut(s) 141, 725
MspI CCGG 2 cut(s) 128, 260
MspR9I CCNGG 2 cut(s) 47, 260
MvaI CCWGG 1 cut(s) 47
MvnI CGCG 1 cut(s) 141
NciI CCSGG 1 cut(s) 260
NdeII GATC 4 cut(s) 292, 349, 365, 409
NheI GCTAGC 1 cut(s) 8
NlaIII CATG 4 cut(s) 506, 637, 697, 883
NlaIV GGNNCC 3 cut(s) 59, 60, 576
NmuCI GTSAC 1 cut(s) 795
NspI RCATGY 1 cut(s) 506
NspV TTCGAA 2 cut(s) 115, 540
PciSI GCTCTTC 2 cut(s) 322, 540
PdmI GAANNNNTTC 1 cut(s) 830
PfeI GAWTC 3 cut(s) 596, 625, 773
PflFI GACNNNGTC 1 cut(s) 938
PmaCI CACGTG 1 cut(s) 617
PmlI CACGTG 1 cut(s) 617
Ppu21I YACGTR 1 cut(s) 617
PpuMI RGGWCCY 1 cut(s) 58
Psp124BI GAGCTC 1 cut(s) 127
Psp5II RGGWCCY 1 cut(s) 58
Psp6I CCWGG 1 cut(s) 45
PspCI CACGTG 1 cut(s) 617
PspGI CCWGG 1 cut(s) 45
PspN4I GGNNCC 3 cut(s) 59, 60, 576
PspPI GGNCC 1 cut(s) 58
PspPPI RGGWCCY 1 cut(s) 58
PstNI CAGNNNCTG 1 cut(s) 599
PsyI GACNNNGTC 1 cut(s) 938
PvuII CAGCTG 1 cut(s) 725
RsaI GTAC 6 cut(s) 74, 198, 469, 586, 603, 894
RsaNI GTAC 6 cut(s) 73, 197, 468, 585, 602, 893
RseI CAYNNNNRTG 1 cut(s) 878
SacI GAGCTC 1 cut(s) 127
SacII CCGCGG 1 cut(s) 142
SapI GCTCTTC 2 cut(s) 322, 540
SaqAI TTAA 2 cut(s) 168, 762
Sau3AI GATC 4 cut(s) 292, 349, 365, 409
Sau96I GGNCC 1 cut(s) 58
ScrFI CCNGG 2 cut(s) 47, 260
SduI GDGCHC 1 cut(s) 127
SfaNI GCATC 2 cut(s) 243, 481
SfcI CTRYAG 1 cut(s) 99
Sfr303I CCGCGG 1 cut(s) 142
SfuI TTCGAA 2 cut(s) 115, 540
SgrBI CCGCGG 1 cut(s) 142
SinI GGWCC 1 cut(s) 58
SmiMI CAYNNNNRTG 1 cut(s) 878
Sse9I AATT 4 cut(s) 272, 439, 526, 958
SsiI CCGC 5 cut(s) 96, 139, 141, 480, 793
SspI AATATT 2 cut(s) 39, 67
SspMI CTAG 4 cut(s) 9, 182, 447, 569
SstI GAGCTC 1 cut(s) 127
StyD4I CCNGG 2 cut(s) 45, 258
StyI CCWWGG 2 cut(s) 519, 847
TaaI ACNGT 4 cut(s) 196, 709, 781, 938
TaiI ACGT 3 cut(s) 210, 619, 747
TaqI TCGA 4 cut(s) 115, 121, 368, 540
TasI AATT 4 cut(s) 272, 439, 526, 958
TatI WGTACW 2 cut(s) 72, 601
TfiI GAWTC 3 cut(s) 596, 625, 773
Tru1I TTAA 2 cut(s) 168, 762
Tru9I TTAA 2 cut(s) 168, 762
TseFI GTSAC 1 cut(s) 795
Tsp45I GTSAC 1 cut(s) 795
TspDTI ATGAA 6 cut(s) 411, 484, 755, 854, 896, 945
Tth111I GACNNNGTC 1 cut(s) 938
VpaK11BI GGWCC 1 cut(s) 58
XapI RAATTY 2 cut(s) 439, 526
XceI RCATGY 1 cut(s) 506
XcmI CCANNNNNNNNNTGG 1 cut(s) 351
XmnI GAANNNNTTC 1 cut(s) 830
XspI CTAG 4 cut(s) 9, 182, 447, 569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.