Rh7CG421500

synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000090
Physical Location & Seq
Reverse (-)
54431527 .. 54447779
16253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG421500.1

Sequence Viewer

Length: 1269 bp
ATGTTCAACAATTTCATCGACGTTGATGGGAAATTTATTAAGGGATCACTTGTCACGGATGTGCAAGGGCTTTTAAGCTTGTATGAAGCCACACATCTTAGGACACACGGAGAGGATATACTAGAAGAAGCCCTGGCCTTCACTACCACTCATCTTGAGTTGGCAGTAGCTGCTGCACAGGGTGGTCTAAGTCCGCCACTTCTAAACCGAGTAACTCATGCCTTATACCAGCCACTGTGGAAGGGCTACCCAAGGCTAGAAGCAAGGCGCTACTTGTCTTTCTACGGGGAACTAAAAAGTTCAGATATCAATGAAACAATGGAATCACAATTGCCACAAACAAGAGGGAAGAAAATACGAAAGCTTAAGTTCAAACTCCCTCCACCTCCGGAAGTTACAGCAGCTCCTCACCTAACATCTGAAGCTCAACTCACGCCAAATCTGCAACCAACACCGGCACCTCAAAACACATCATCTTCTCTACAAATAGCAAGACCTCAGTCCACATCAGCTTCTCAACCTATGACAAGGACTCAGCCTACACCGGCTTCTCAACTAACACCAACTCCTCAACCTATTAGATTAGCACATCACTGTGTTCTAGCTCCAGAACCATCTCCACCTTCTCATGCATTTGTGACTACACTCCCTCAAAAGCAAGTAGCTCAGTGCCCCACAAGTTTGAATTCAGTTAATGGAGCAGCAATAACTCCTGAGCCATCTGATGCTTCTCAATCTCGAGCTTCACCACCATATCAAGAGATAGCACCCCAGCAACCAGCAACTCAGAATGGAGAAAGTGATGTATATCAGGCACTCTTGGACATCTACGCTGATATTGAAAATGAGCTTGCGAAGGAGGGGAAGTTGTATCGCATCCACTACGCCAGAGAATCAATGAAAGTTCAAGTCAGATCTTGGTTTCAAGAAGCCAAATGGTTCCATGAGAAATACACTCCAACGTTGGATGAATATATGTCAGCCGCTCTTTCCACAACCTATTTCATGATGGCAACCACATCCCTTGTTTTAATGGCCGGAGATGTTGTCACAAAAAATTCCTTGGACTGGGTGTTCACCGACCCAAAGATGGTAAAGGCTTTATCAACAATAGGCAGACTCATGGATGACTTGCAATCCCACAAGATGATGGCGATGCCAAAGAGCAAACGATTTTCAAAACTTGGGCACCCACTTGGTATGAAAAGCCCATCAATGGAGTTTGGGCCCCCCTTCGGGACATGCTTTTTTGGGCTTGCCCTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00909 map00909
Pfam Domains
Protein Families
Terpene_synth Terpene_synth_C

Protein Analysis

422

Amino Acids

46.67

Weight (kDa)

7.75

Isoelectric Point (pI)

51.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 1 - 75 2.1e-19 Terpene synthase, N-terminal domain
Terpene_syn_C_2 PF19086 258 - 382 1.2e-24 Terpene synthase family 2, C-terminal metal binding
Terpene_synth_C PF03936 269 - 382 2.6e-34 Terpene synthase family, metal binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 457, 1188
AccBSI CCGCTC 1 cut(s) 986
AccIII TCCGGA 1 cut(s) 388
AciI CCGC 2 cut(s) 194, 984
AclI AACGTT 1 cut(s) 962
AclWI GGATC 1 cut(s) 52
AcoI YGGCCR 1 cut(s) 1035
AcsI RAATTY 3 cut(s) 32, 685, 1057
AcuI CTGAAG 1 cut(s) 441
AdeI CACNNNGTG 1 cut(s) 182
AfiI CCNNNNNNNGG 5 cut(s) 1068, 1090, 1216, 1235, 1236
AflII CTTAAG 1 cut(s) 365
AgsI TTSAA 7 cut(s) 7, 373, 685, 842, 908, 926, 1179
AjnI CCWGG 1 cut(s) 132
AleI CACNNNNGTG 1 cut(s) 59
AloI GAACNNNNNNTCC 2 cut(s) 1058, 1090
AlwI GGATC 1 cut(s) 52
AlwNI CAGNNNCTG 2 cut(s) 170, 235
Ama87I CYCGRG 1 cut(s) 738
Aor13HI TCCGGA 1 cut(s) 388
AoxI GGCC 3 cut(s) 135, 1035, 1226
ApaI GGGCCC 1 cut(s) 1230
ApeKI GCWGC 4 cut(s) 170, 173, 401, 701
ApoI RAATTY 3 cut(s) 32, 685, 1057
AspLEI GCGC 1 cut(s) 270
AspS9I GGNCC 2 cut(s) 1226, 1227
AsuHPI GGTGA 3 cut(s) 401, 738, 1069
AvaI CYCGRG 1 cut(s) 738
BaeGI GKGCMC 3 cut(s) 674, 1191, 1230
BanI GGYRCC 2 cut(s) 457, 1188
BanII GRGCYC 1 cut(s) 1230
BbvI GCAGC 4 cut(s) 157, 160, 413, 713
BccI CCATC 7 cut(s) 20, 622, 727, 1003, 1084, 1144, 1219
BciT130I CCWGG 1 cut(s) 134
BfaI CTAG 3 cut(s) 122, 257, 602
BfoI RGCGCY 1 cut(s) 271
BfrI CTTAAG 1 cut(s) 365
BglII AGATCT 1 cut(s) 914
BisI GCNGC 5 cut(s) 171, 174, 402, 702, 984
BlsI GCNGC 5 cut(s) 172, 175, 403, 703, 985
Bme1390I CCNGG 1 cut(s) 134
BmeT110I CYCGRG 1 cut(s) 738
BmgT120I GGNCC 2 cut(s) 1226, 1227
BmiI GGNNCC 5 cut(s) 459, 941, 1190, 1228, 1229
BmrFI CCNGG 1 cut(s) 134
BmrI ACTGGG 1 cut(s) 1078
BmsI GCATC 3 cut(s) 715, 885, 1146
BmuI ACTGGG 1 cut(s) 1078
BoxI GACNNNNGTC 1 cut(s) 499
BpmI CTGGAG 1 cut(s) 591
Bpu10I CCTNAGC 1 cut(s) 714
BpuEI CTTGAG 1 cut(s) 176
BsaBI GATNNNNATC 1 cut(s) 807
BsaJI CCNNGG 3 cut(s) 132, 251, 1062
BsaWI WCCGGW 1 cut(s) 388
BsaXI ACNNNNNCTCC 8 cut(s) 388, 418, 550, 580, 851, 881, 1032, 1062
Bsc4I CCNNNNNNNGG 5 cut(s) 1068, 1090, 1216, 1235, 1236
Bse118I RCCGGY 2 cut(s) 454, 544
Bse1I ACTGG 1 cut(s) 1073
Bse8I GATNNNNATC 1 cut(s) 807
BseAI TCCGGA 1 cut(s) 388
BseBI CCWGG 1 cut(s) 134
BseDI CCNNGG 3 cut(s) 132, 251, 1062
BseGI GGATG 5 cut(s) 64, 876, 973, 1019, 1132
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 5 cut(s) 1068, 1090, 1216, 1235, 1236
BseMII CTCAG 5 cut(s) 512, 548, 680, 705, 800
BseNI ACTGG 1 cut(s) 1073
BseRI GAGGAG 2 cut(s) 396, 558
BseSI GKGCMC 3 cut(s) 674, 1191, 1230
BseXI GCAGC 4 cut(s) 157, 160, 413, 713
BseYI CCCAGC 1 cut(s) 771
BsgI GTGCAG 1 cut(s) 159
BshFI GGCC 3 cut(s) 137, 1037, 1228
BshNI GGYRCC 2 cut(s) 457, 1188
BsiHKCI CYCGRG 1 cut(s) 738
BsiSI CCGG 4 cut(s) 389, 455, 545, 1038
BslFI GGGAC 1 cut(s) 1252
BslI CCNNNNNNNGG 5 cut(s) 1068, 1090, 1216, 1235, 1236
BsmFI GGGAC 1 cut(s) 1252
BsnI GGCC 3 cut(s) 137, 1037, 1228
BsoBI CYCGRG 1 cut(s) 738
Bsp120I GGGCCC 1 cut(s) 1226
Bsp1286I GDGCHC 3 cut(s) 674, 1191, 1230
Bsp13I TCCGGA 1 cut(s) 388
Bsp143I GATC 2 cut(s) 44, 914
BspACI CCGC 2 cut(s) 194, 984
BspANI GGCC 3 cut(s) 137, 1037, 1228
BspCNI CTCAG 5 cut(s) 511, 547, 679, 706, 799
BspEI TCCGGA 1 cut(s) 388
BspHI TCATGA 1 cut(s) 1005
BspLI GGNNCC 5 cut(s) 459, 941, 1190, 1228, 1229
BspPI GGATC 1 cut(s) 52
BspT107I GGYRCC 2 cut(s) 457, 1188
BspTI CTTAAG 1 cut(s) 365
BsrBI CCGCTC 1 cut(s) 986
BsrFI RCCGGY 2 cut(s) 454, 544
BsrI ACTGG 1 cut(s) 1073
BssAI RCCGGY 2 cut(s) 454, 544
BssECI CCNNGG 3 cut(s) 132, 251, 1062
BssMI GATC 2 cut(s) 44, 914
BssT1I CCWWGG 2 cut(s) 251, 1062
Bst2UI CCWGG 1 cut(s) 134
Bst4CI ACNGT 2 cut(s) 237, 596
BstAFI CTTAAG 1 cut(s) 365
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 2 cut(s) 852, 1257
BstDEI CTNAG 7 cut(s) 98, 188, 498, 534, 666, 714, 786
BstF5I GGATG 5 cut(s) 64, 876, 973, 1019, 1132
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 1 cut(s) 270
BstKTI GATC 2 cut(s) 47, 917
BstMBI GATC 2 cut(s) 44, 914
BstMWI GCNNNNNNNGC 2 cut(s) 170, 442
BstNI CCWGG 1 cut(s) 134
BstNSI RCATGY 1 cut(s) 1245
BstPAI GACNNNNGTC 1 cut(s) 499
BstSCI CCNGG 1 cut(s) 132
BstSLI GKGCMC 3 cut(s) 674, 1191, 1230
BstV1I GCAGC 4 cut(s) 157, 160, 413, 713
BstX2I RGATCY 1 cut(s) 914
BstYI RGATCY 1 cut(s) 914
BsuRI GGCC 3 cut(s) 137, 1037, 1228
BtgZI GCGATG 1 cut(s) 1169
BtsCI GGATG 5 cut(s) 64, 876, 973, 1019, 1132
BtsIMutI CAGTG 3 cut(s) 233, 592, 674
Cac8I GCNNGC 2 cut(s) 852, 1257
CaiI CAGNNNCTG 2 cut(s) 170, 235
CciI TCATGA 1 cut(s) 1005
CfoI GCGC 1 cut(s) 270
Cfr10I RCCGGY 2 cut(s) 454, 544
Cfr13I GGNCC 2 cut(s) 1226, 1227
CspCI CAANNNNNGTGG 4 cut(s) 136, 171, 1006, 1041
CviAII CATG 6 cut(s) 218, 629, 944, 1006, 1123, 1242
DdeI CTNAG 7 cut(s) 98, 188, 498, 534, 666, 714, 786
DpnI GATC 2 cut(s) 46, 916
DpnII GATC 2 cut(s) 44, 914
DraIII CACNNNGTG 1 cut(s) 182
EaeI YGGCCR 1 cut(s) 1035
EciI GGCGGA 1 cut(s) 183
Eco130I CCWWGG 2 cut(s) 251, 1062
Eco24I GRGCYC 1 cut(s) 1230
Eco32I GATATC 1 cut(s) 307
Eco57I CTGAAG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 738
EcoO109I RGGNCCY 1 cut(s) 1227
EcoRI GAATTC 1 cut(s) 685
EcoRII CCWGG 1 cut(s) 132
EcoRV GATATC 1 cut(s) 307
EcoT14I CCWWGG 2 cut(s) 251, 1062
EcoT22I ATGCAT 1 cut(s) 634
EcoT38I GRGCYC 1 cut(s) 1230
ErhI CCWWGG 2 cut(s) 251, 1062
FaeI CATG 6 cut(s) 221, 632, 947, 1009, 1126, 1245
FaqI GGGAC 1 cut(s) 1252
FatI CATG 6 cut(s) 217, 628, 943, 1005, 1122, 1241
Fnu4HI GCNGC 5 cut(s) 171, 174, 402, 702, 984
FokI GGATG 5 cut(s) 71, 863, 980, 1006, 1139
FriOI GRGCYC 1 cut(s) 1230
Fsp4HI GCNGC 5 cut(s) 171, 174, 402, 702, 984
FspBI CTAG 3 cut(s) 122, 257, 602
GlaI GCGC 1 cut(s) 269
GluI GCNGC 5 cut(s) 171, 174, 402, 702, 984
GsaI CCCAGC 1 cut(s) 775
GsuI CTGGAG 1 cut(s) 591
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 3 cut(s) 137, 1037, 1228
HapII CCGG 4 cut(s) 389, 455, 545, 1038
HhaI GCGC 1 cut(s) 270
Hin1II CATG 6 cut(s) 221, 632, 947, 1009, 1126, 1245
Hin6I GCGC 1 cut(s) 268
HinP1I GCGC 1 cut(s) 268
HindIII AAGCTT 2 cut(s) 76, 362
HinfI GANTC 4 cut(s) 323, 532, 893, 1119
HpaII CCGG 4 cut(s) 389, 455, 545, 1038
HphI GGTGA 3 cut(s) 401, 738, 1069
Hpy166II GTNNAC 2 cut(s) 504, 1077
Hpy188I TCNGA 5 cut(s) 304, 421, 724, 789, 914
Hpy188III TCNNGA 9 cut(s) 155, 389, 608, 713, 738, 758, 926, 1006, 1237
Hpy8I GTNNAC 2 cut(s) 504, 1077
Hpy99I CGWCG 1 cut(s) 23
HpyAV CCTTC 5 cut(s) 148, 235, 633, 850, 1243
HpyCH4III ACNGT 2 cut(s) 237, 596
HpyCH4IV ACGT 2 cut(s) 21, 962
HpyCH4V TGCA 5 cut(s) 64, 176, 445, 632, 1135
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 442
HpyF3I CTNAG 7 cut(s) 98, 188, 498, 534, 666, 714, 786
HpySE526I ACGT 2 cut(s) 21, 962
Hsp92II CATG 6 cut(s) 221, 632, 947, 1009, 1126, 1245
HspAI GCGC 1 cut(s) 268
Kpn2I TCCGGA 1 cut(s) 388
Kzo9I GATC 2 cut(s) 44, 914
LmnI GCTCC 3 cut(s) 409, 610, 698
Lsp1109I GCAGC 4 cut(s) 157, 160, 413, 713
LweI GCATC 3 cut(s) 715, 885, 1146
MaeI CTAG 3 cut(s) 122, 257, 602
MaeII ACGT 2 cut(s) 21, 962
MaeIII GTNAC 5 cut(s) 52, 211, 394, 637, 1048
MalI GATC 2 cut(s) 46, 916
MbiI CCGCTC 1 cut(s) 986
MboI GATC 2 cut(s) 44, 914
MboII GAAGA 3 cut(s) 137, 361, 468
MfeI CAATTG 1 cut(s) 329
MflI RGATCY 1 cut(s) 914
MhlI GDGCHC 3 cut(s) 674, 1191, 1230
MluCI AATT 5 cut(s) 10, 32, 329, 685, 1057
MlyI GAGTC 2 cut(s) 526, 1113
MmeI TCCRAC 2 cut(s) 945, 983
Mph1103I ATGCAT 1 cut(s) 634
MroI TCCGGA 1 cut(s) 388
MseI TTAA 6 cut(s) 39, 74, 366, 693, 1031, 1267
MslI CAYNNNNRTG 2 cut(s) 59, 594
MspCI CTTAAG 1 cut(s) 365
MspI CCGG 4 cut(s) 389, 455, 545, 1038
MspR9I CCNGG 1 cut(s) 134
MunI CAATTG 1 cut(s) 329
MvaI CCWGG 1 cut(s) 134
MwoI GCNNNNNNNGC 2 cut(s) 170, 442
NdeII GATC 2 cut(s) 44, 914
NlaIII CATG 6 cut(s) 221, 632, 947, 1009, 1126, 1245
NlaIV GGNNCC 5 cut(s) 459, 941, 1190, 1228, 1229
NmuCI GTSAC 3 cut(s) 52, 637, 1048
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 1 cut(s) 1245
OliI CACNNNNGTG 1 cut(s) 59
PaeR7I CTCGAG 1 cut(s) 738
PagI TCATGA 1 cut(s) 1005
PfeI GAWTC 2 cut(s) 323, 893
PkrI GCNGC 5 cut(s) 172, 175, 403, 703, 985
PleI GAGTC 2 cut(s) 526, 1113
PpsI GAGTC 2 cut(s) 526, 1113
PshAI GACNNNNGTC 1 cut(s) 499
Psp1406I AACGTT 1 cut(s) 962
Psp6I CCWGG 1 cut(s) 132
PspFI CCCAGC 1 cut(s) 771
PspGI CCWGG 1 cut(s) 132
PspN4I GGNNCC 5 cut(s) 459, 941, 1190, 1228, 1229
PspOMI GGGCCC 1 cut(s) 1226
PspPI GGNCC 2 cut(s) 1226, 1227
PstNI CAGNNNCTG 2 cut(s) 170, 235
PsuI RGATCY 1 cut(s) 914
RseI CAYNNNNRTG 2 cut(s) 59, 594
SaqAI TTAA 6 cut(s) 39, 74, 366, 693, 1031, 1267
SatI GCNGC 5 cut(s) 171, 174, 402, 702, 984
Sau3AI GATC 2 cut(s) 44, 914
Sau96I GGNCC 2 cut(s) 1226, 1227
SchI GAGTC 2 cut(s) 526, 1113
ScrFI CCNGG 1 cut(s) 134
SduI GDGCHC 3 cut(s) 674, 1191, 1230
SfaNI GCATC 3 cut(s) 715, 885, 1146
Sfr274I CTCGAG 1 cut(s) 738
SlaI CTCGAG 1 cut(s) 738
SmiMI CAYNNNNRTG 2 cut(s) 59, 594
SmlI CTYRAG 3 cut(s) 155, 365, 738
SmoI CTYRAG 3 cut(s) 155, 365, 738
Sse9I AATT 5 cut(s) 10, 32, 329, 685, 1057
SsiI CCGC 2 cut(s) 194, 984
SspMI CTAG 3 cut(s) 122, 257, 602
StyD4I CCNGG 1 cut(s) 132
StyI CCWWGG 2 cut(s) 251, 1062
TaaI ACNGT 2 cut(s) 237, 596
TaiI ACGT 2 cut(s) 24, 965
TaqI TCGA 2 cut(s) 18, 739
TasI AATT 5 cut(s) 10, 32, 329, 685, 1057
TauI GCSGC 1 cut(s) 986
TfiI GAWTC 2 cut(s) 323, 893
Tru1I TTAA 6 cut(s) 39, 74, 366, 693, 1031, 1267
Tru9I TTAA 6 cut(s) 39, 74, 366, 693, 1031, 1267
TscAI CASTG 3 cut(s) 240, 599, 674
TseFI GTSAC 3 cut(s) 52, 637, 1048
TseI GCWGC 4 cut(s) 170, 173, 401, 701
Tsp45I GTSAC 3 cut(s) 52, 637, 1048
TspDTI ATGAA 7 cut(s) 4, 99, 327, 914, 984, 994, 1217
TspGWI ACGGA 2 cut(s) 71, 123
TspRI CASTG 3 cut(s) 240, 599, 674
Vha464I CTTAAG 1 cut(s) 365
XapI RAATTY 3 cut(s) 32, 685, 1057
XceI RCATGY 1 cut(s) 1245
XhoI CTCGAG 1 cut(s) 738
XspI CTAG 3 cut(s) 122, 257, 602
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.