FvH4_7g09790

Plant transposase (Ptta/En/Spm family)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000090
Physical Location & Seq
Forward (+)
9356557 .. 9360710
4154 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09790.t3

Sequence Viewer

Length: 1332 bp
ATGCTCGGGATGTTGCAATCAAGAACAGTGGGCAAGAACAAGAAGATGAATACAATCAAGACAAGCCAGCCACGCCCACAAACGCGTCAACAATCACAAGCACAATCAGAACATGCATTTGCCACCCCTACTAGGACGCAAATAGAAATGTTTGGTGAAGCAGGTCAGGATGTTTCTTATGCACAGGCGAGGAAAACCCGTGGCATTACACAGGGGTTGGGAACTCAAGCTCTGATCAATGCTTGCAAGCAGAGGATTCCAATCCGGCCAAATGGCGAGCGCAAGCTCCCACAGACTGTTCGAGCCAATGTTAAGTTTAGGTCAGAGATTGGGATACAAACGCGCCAGAATGCTCCCCTTATGGTCAAGCGCTGGAAAGAAGTCACTGCAGTGGATAAGGAAGATGTCATCAAGGGCTTGGCGATTAAGTTTGACTTCGATTATACGGACCCGGTTGTAAAGAAATTTATTGACGCTCATATGGCCAAGTCGTACTCACTATGGAGGAGCAGACTGAACCAACATTACAAGCAGCATGCTTATGACCCGGAATATGCACGGGCACACCCTCCCTTAAAGCTGTTTCATAATAGAAAAATGGCTGAATGGGAGTGGCTGTGTGATGAATTATTCACAGATGAGGACTATCAGAAACGTTGCAAGATAAACTCTGCTAACCGAAATAAGCAAGAATATGATCATCTTGAGAGTTTACCTCCCTATCCGAAACTTATAGCAGTTGCACAAGAGATGCCAGTAGAATCAACAAAAAAGGATTCTGAGTATGATGAGGAAGAGGATGATGTTGATGATAATGGGATTGGTGATGATGATGATGATGATAATGATGTTGATTATAATGTTCATGATGATTATGCTGGTTTTAATGATAATGTTGATGTTAATGATGAGGATGATGTTGGAGGTAATGTTGGAAGAAACGTAGAAGTTGAGGTTGATAATGCTGAAGAGCATGGAAATCAAAGTGTATCCACCAATACTGAGAAAAGTAGTGAAAAGAGAAAGCTCTACTTTACCAATGTGCATGGTGAACGTTCAAAGAAGAGACATGAAGTAGCTCAAGAGCAAAGGTTTACCGATTCTGCACCCCTGCGTGCTAATGATGAGGTCCAATCAGCTTCAAAGGAGGTTAGCGATGAAAAATACTTGATGCAATGTTTTGGAATTTTGAACAAGATGGACGAAATTGATGATGACAGTTACTCAAAAGCCTTGAAGCTCTTCCGCGGGGATCCTACTTGGAGAAAGCTGTTTGTGGGAATGCCAGAGAAGAGGAGAAAAAACTTCATCCTCAATCTTTACTGTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

444

Amino Acids

51.18

Weight (kDa)

5.7

Isoelectric Point (pI)

52.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 858
Acc36I ACCTGC 1 cut(s) 152
AccII CGCG 3 cut(s) 85, 343, 1248
AciI CCGC 2 cut(s) 1246, 1248
AclI AACGTT 2 cut(s) 655, 1054
AclWI GGATC 2 cut(s) 1247, 1260
AcoI YGGCCR 2 cut(s) 266, 483
AcsI RAATTY 2 cut(s) 464, 1185
AcuI CTGAAG 1 cut(s) 987
AfaI GTAC 2 cut(s) 494, 1327
AfeI AGCGCT 1 cut(s) 371
AfiI CCNNNNNNNGG 1 cut(s) 132
AflIII ACRYGT 1 cut(s) 83
AgsI TTSAA 4 cut(s) 1059, 1143, 1192, 1237
AleI CACNNNNGTG 1 cut(s) 389
AluBI AGCT 8 cut(s) 230, 286, 580, 1027, 1079, 1139, 1240, 1270
AluI AGCT 8 cut(s) 230, 286, 580, 1027, 1079, 1139, 1240, 1270
Alw26I GTCTC 1 cut(s) 1060
AlwI GGATC 2 cut(s) 1247, 1260
Ama87I CYCGRG 1 cut(s) 5
Aor51HI AGCGCT 1 cut(s) 371
AoxI GGCC 2 cut(s) 266, 483
ApeKI GCWGC 1 cut(s) 532
ApoI RAATTY 2 cut(s) 464, 1185
Asp700I GAANNNNTTC 1 cut(s) 1241
AspLEI GCGC 3 cut(s) 282, 345, 372
AspS9I GGNCC 2 cut(s) 448, 1129
AsuC2I CCSGG 2 cut(s) 452, 548
AsuHPI GGTGA 3 cut(s) 167, 836, 1061
AvaI CYCGRG 1 cut(s) 5
AvaII GGWCC 2 cut(s) 448, 1129
BaeGI GKGCMC 1 cut(s) 565
BalI TGGCCA 1 cut(s) 485
BamHI GGATCC 1 cut(s) 1252
BbvI GCAGC 1 cut(s) 544
BccI CCATC 1 cut(s) 1192
BciVI GTATCC 2 cut(s) 327, 1000
BclI TGATCA 2 cut(s) 234, 697
BcnI CCSGG 2 cut(s) 452, 548
BcoDI GTCTC 1 cut(s) 1060
BfaI CTAG 1 cut(s) 132
BfmI CTRYAG 1 cut(s) 387
BfoI RGCGCY 1 cut(s) 373
BfuAI ACCTGC 1 cut(s) 152
BfuI GTATCC 2 cut(s) 327, 1000
BisI GCNGC 1 cut(s) 533
BlsI GCNGC 1 cut(s) 534
Bme1390I CCNGG 2 cut(s) 452, 548
Bme18I GGWCC 2 cut(s) 448, 1129
BmeT110I CYCGRG 1 cut(s) 5
BmgT120I GGNCC 2 cut(s) 448, 1129
BmiI GGNNCC 2 cut(s) 450, 1254
BmrFI CCNGG 2 cut(s) 452, 548
BmsI GCATC 2 cut(s) 741, 1161
BplI GAGNNNNNCTC 2 cut(s) 700, 732
BpuEI CTTGAG 3 cut(s) 210, 725, 1065
BpuMI CCSGG 2 cut(s) 452, 548
BsaBI GATNNNNATC 1 cut(s) 260
BsaJI CCNNGG 2 cut(s) 199, 1246
BsaXI ACNNNNNCTCC 4 cut(s) 602, 632, 915, 945
Bsc4I CCNNNNNNNGG 1 cut(s) 132
Bse1I ACTGG 1 cut(s) 755
Bse3DI GCAATG 1 cut(s) 1181
Bse8I GATNNNNATC 1 cut(s) 260
BseDI CCNNGG 2 cut(s) 199, 1246
BseGI GGATG 5 cut(s) 15, 175, 805, 919, 1308
BseJI GATNNNNATC 1 cut(s) 260
BseLI CCNNNNNNNGG 1 cut(s) 132
BseMI GCAATG 1 cut(s) 1181
BseMII CTCAG 2 cut(s) 771, 993
BseNI ACTGG 1 cut(s) 755
BseRI GAGGAG 2 cut(s) 520, 1309
BseSI GKGCMC 1 cut(s) 565
BseXI GCAGC 1 cut(s) 544
BsgI GTGCAG 1 cut(s) 1089
Bsh1236I CGCG 3 cut(s) 85, 343, 1248
BshFI GGCC 2 cut(s) 268, 485
BsiHKCI CYCGRG 1 cut(s) 5
BsiSI CCGG 3 cut(s) 265, 452, 548
BslI CCNNNNNNNGG 1 cut(s) 132
BsmAI GTCTC 1 cut(s) 1060
BsmI GAATGC 2 cut(s) 355, 1287
BsnI GGCC 2 cut(s) 268, 485
BsoBI CYCGRG 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 565
Bsp1407I TGTACA 1 cut(s) 1325
Bsp143I GATC 3 cut(s) 234, 697, 1252
BspACI CCGC 2 cut(s) 1246, 1248
BspANI GGCC 2 cut(s) 268, 485
BspCNI CTCAG 2 cut(s) 772, 994
BspFNI CGCG 3 cut(s) 85, 343, 1248
BspHI TCATGA 1 cut(s) 865
BspLI GGNNCC 2 cut(s) 450, 1254
BspMAI CTGCAG 1 cut(s) 391
BspMI ACCTGC 1 cut(s) 152
BspPI GGATC 2 cut(s) 1247, 1260
BspQI GCTCTTC 2 cut(s) 963, 1247
BsrDI GCAATG 1 cut(s) 1181
BsrGI TGTACA 1 cut(s) 1325
BsrI ACTGG 1 cut(s) 755
BssECI CCNNGG 2 cut(s) 199, 1246
BssMI GATC 3 cut(s) 234, 697, 1252
Bst4CI ACNGT 4 cut(s) 28, 298, 1220, 1325
Bst6I CTCTTC 5 cut(s) 789, 963, 1058, 1247, 1286
BstAUI TGTACA 1 cut(s) 1325
BstC8I GCNNGC 7 cut(s) 68, 244, 248, 278, 284, 537, 1116
BstDEI CTNAG 2 cut(s) 780, 1002
BstDSI CCRYGG 2 cut(s) 199, 1246
BstF5I GGATG 5 cut(s) 15, 175, 805, 919, 1308
BstFNI CGCG 3 cut(s) 85, 343, 1248
BstH2I RGCGCY 1 cut(s) 373
BstHHI GCGC 3 cut(s) 282, 345, 372
BstKTI GATC 3 cut(s) 237, 700, 1255
BstMAI GTCTC 1 cut(s) 1060
BstMBI GATC 3 cut(s) 234, 697, 1252
BstMWI GCNNNNNNNGC 2 cut(s) 72, 482
BstNSI RCATGY 2 cut(s) 116, 539
BstSCI CCNGG 2 cut(s) 450, 546
BstSFI CTRYAG 1 cut(s) 387
BstSLI GKGCMC 1 cut(s) 565
BstUI CGCG 3 cut(s) 85, 343, 1248
BstV1I GCAGC 1 cut(s) 544
BstX2I RGATCY 1 cut(s) 1252
BstYI RGATCY 1 cut(s) 1252
BsuI GTATCC 2 cut(s) 327, 1000
BsuRI GGCC 2 cut(s) 268, 485
BtgI CCRYGG 2 cut(s) 199, 1246
BtgZI GCGATG 1 cut(s) 1170
BtsCI GGATG 5 cut(s) 15, 175, 805, 919, 1308
BtsI GCAGTG 2 cut(s) 384, 396
BtsIMutI CAGTG 3 cut(s) 33, 384, 396
BveI ACCTGC 1 cut(s) 152
Cac8I GCNNGC 7 cut(s) 68, 244, 248, 278, 284, 537, 1116
CciI TCATGA 1 cut(s) 865
CfoI GCGC 3 cut(s) 282, 345, 372
Cfr13I GGNCC 2 cut(s) 448, 1129
Cfr42I CCGCGG 1 cut(s) 1249
CseI GACGC 3 cut(s) 74, 145, 482
Csp6I GTAC 2 cut(s) 493, 1326
CspCI CAANNNNNGTGG 2 cut(s) 9, 44
CviAII CATG 7 cut(s) 113, 536, 866, 974, 1046, 1070, 1329
CviQI GTAC 2 cut(s) 493, 1326
DdeI CTNAG 2 cut(s) 780, 1002
DpnI GATC 3 cut(s) 236, 699, 1254
DpnII GATC 3 cut(s) 234, 697, 1252
EaeI YGGCCR 2 cut(s) 266, 483
Eam1104I CTCTTC 5 cut(s) 789, 963, 1058, 1247, 1286
EarI CTCTTC 5 cut(s) 789, 963, 1058, 1247, 1286
Eco47I GGWCC 2 cut(s) 448, 1129
Eco47III AGCGCT 1 cut(s) 371
Eco57I CTGAAG 1 cut(s) 987
Eco88I CYCGRG 1 cut(s) 5
EcoT22I ATGCAT 1 cut(s) 118
FaeI CATG 7 cut(s) 116, 539, 869, 977, 1049, 1073, 1332
FalI AAGNNNNNCTT 4 cut(s) 419, 451, 1016, 1048
FatI CATG 7 cut(s) 112, 535, 865, 973, 1045, 1069, 1328
FauI CCCGC 1 cut(s) 1241
FauNDI CATATG 1 cut(s) 480
FbaI TGATCA 2 cut(s) 234, 697
Fnu4HI GCNGC 1 cut(s) 533
FokI GGATG 5 cut(s) 22, 182, 812, 926, 1295
Fsp4HI GCNGC 1 cut(s) 533
FspBI CTAG 1 cut(s) 132
GlaI GCGC 3 cut(s) 281, 344, 371
GluI GCNGC 1 cut(s) 533
HaeII RGCGCY 1 cut(s) 373
HaeIII GGCC 2 cut(s) 268, 485
HapII CCGG 3 cut(s) 265, 452, 548
HgaI GACGC 3 cut(s) 74, 145, 482
HhaI GCGC 3 cut(s) 282, 345, 372
Hin1II CATG 7 cut(s) 116, 539, 869, 977, 1049, 1073, 1332
Hin6I GCGC 3 cut(s) 280, 343, 370
HinP1I GCGC 3 cut(s) 280, 343, 370
HincII GTYRAC 1 cut(s) 89
HindII GTYRAC 1 cut(s) 89
HinfI GANTC 4 cut(s) 256, 761, 776, 1100
HpaII CCGG 3 cut(s) 265, 452, 548
HphI GGTGA 3 cut(s) 167, 836, 1061
Hpy166II GTNNAC 4 cut(s) 89, 713, 1052, 1095
Hpy188I TCNGA 6 cut(s) 109, 234, 325, 651, 726, 781
Hpy188III TCNNGA 7 cut(s) 7, 21, 58, 167, 704, 866, 1082
Hpy8I GTNNAC 4 cut(s) 89, 713, 1052, 1095
HpyCH4III ACNGT 4 cut(s) 28, 298, 1220, 1325
HpyCH4IV ACGT 3 cut(s) 655, 942, 1054
HpyF10VI GCNNNNNNNGC 2 cut(s) 72, 482
HpyF3I CTNAG 2 cut(s) 780, 1002
HpySE526I ACGT 3 cut(s) 655, 942, 1054
Hsp92II CATG 7 cut(s) 116, 539, 869, 977, 1049, 1073, 1332
HspAI GCGC 3 cut(s) 280, 343, 370
Ksp22I TGATCA 2 cut(s) 234, 697
KspI CCGCGG 1 cut(s) 1249
Kzo9I GATC 3 cut(s) 234, 697, 1252
LguI GCTCTTC 2 cut(s) 963, 1247
LmnI GCTCC 3 cut(s) 291, 358, 507
Lsp1109I GCAGC 1 cut(s) 544
LweI GCATC 2 cut(s) 741, 1161
MaeI CTAG 1 cut(s) 132
MaeII ACGT 3 cut(s) 655, 942, 1054
MaeIII GTNAC 2 cut(s) 382, 1220
MalI GATC 3 cut(s) 236, 699, 1254
MboI GATC 3 cut(s) 234, 697, 1252
MboII GAAGA 8 cut(s) 55, 413, 806, 948, 980, 1075, 1234, 1303
MflI RGATCY 1 cut(s) 1252
MhlI GDGCHC 1 cut(s) 565
MlsI TGGCCA 1 cut(s) 485
MluCI AATT 4 cut(s) 464, 626, 1185, 1206
MluI ACGCGT 1 cut(s) 83
MluNI TGGCCA 1 cut(s) 485
MmeI TCCRAC 2 cut(s) 901, 913
Mox20I TGGCCA 1 cut(s) 485
Mph1103I ATGCAT 1 cut(s) 118
MroXI GAANNNNTTC 1 cut(s) 1241
MscI TGGCCA 1 cut(s) 485
MseI TTAA 5 cut(s) 312, 426, 575, 885, 903
MslI CAYNNNNRTG 2 cut(s) 389, 540
Msp20I TGGCCA 1 cut(s) 485
MspA1I CMGCKG 1 cut(s) 1248
MspI CCGG 3 cut(s) 265, 452, 548
MspR9I CCNGG 2 cut(s) 452, 548
Mva1269I GAATGC 2 cut(s) 355, 1287
MvnI CGCG 3 cut(s) 85, 343, 1248
MwoI GCNNNNNNNGC 2 cut(s) 72, 482
NciI CCSGG 2 cut(s) 452, 548
NdeI CATATG 1 cut(s) 480
NdeII GATC 3 cut(s) 234, 697, 1252
NlaIII CATG 7 cut(s) 116, 539, 869, 977, 1049, 1073, 1332
NlaIV GGNNCC 2 cut(s) 450, 1254
NmuCI GTSAC 1 cut(s) 382
NsiI ATGCAT 1 cut(s) 118
NspI RCATGY 2 cut(s) 116, 539
OliI CACNNNNGTG 1 cut(s) 389
PaeI GCATGC 1 cut(s) 539
PagI TCATGA 1 cut(s) 865
PciSI GCTCTTC 2 cut(s) 963, 1247
PctI GAATGC 2 cut(s) 355, 1287
PdmI GAANNNNTTC 1 cut(s) 1241
PfeI GAWTC 4 cut(s) 256, 761, 776, 1100
PkrI GCNGC 1 cut(s) 534
PsiI TTATAA 1 cut(s) 858
Psp1406I AACGTT 2 cut(s) 655, 1054
PspN4I GGNNCC 2 cut(s) 450, 1254
PspPI GGNCC 2 cut(s) 448, 1129
PsrI GAACNNNNNNTAC 2 cut(s) 509, 541
PstI CTGCAG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 1252
RsaI GTAC 2 cut(s) 494, 1327
RsaNI GTAC 2 cut(s) 493, 1326
RseI CAYNNNNRTG 2 cut(s) 389, 540
SacII CCGCGG 1 cut(s) 1249
SapI GCTCTTC 2 cut(s) 963, 1247
SaqAI TTAA 5 cut(s) 312, 426, 575, 885, 903
SatI GCNGC 1 cut(s) 533
Sau3AI GATC 3 cut(s) 234, 697, 1252
Sau96I GGNCC 2 cut(s) 448, 1129
ScrFI CCNGG 2 cut(s) 452, 548
SduI GDGCHC 1 cut(s) 565
SfaNI GCATC 2 cut(s) 741, 1161
SfcI CTRYAG 1 cut(s) 387
Sfr303I CCGCGG 1 cut(s) 1249
SgrBI CCGCGG 1 cut(s) 1249
SinI GGWCC 2 cut(s) 448, 1129
SmiMI CAYNNNNRTG 2 cut(s) 389, 540
SmlI CTYRAG 3 cut(s) 225, 704, 1080
SmoI CTYRAG 3 cut(s) 225, 704, 1080
SphI GCATGC 1 cut(s) 539
Sse9I AATT 4 cut(s) 464, 626, 1185, 1206
SsiI CCGC 2 cut(s) 1246, 1248
SspMI CTAG 1 cut(s) 132
StyD4I CCNGG 2 cut(s) 450, 546
TaaI ACNGT 4 cut(s) 28, 298, 1220, 1325
TaiI ACGT 3 cut(s) 658, 945, 1057
TaqI TCGA 2 cut(s) 301, 438
TasI AATT 4 cut(s) 464, 626, 1185, 1206
TatI WGTACW 1 cut(s) 1325
TfiI GAWTC 4 cut(s) 256, 761, 776, 1100
Tru1I TTAA 5 cut(s) 312, 426, 575, 885, 903
Tru9I TTAA 5 cut(s) 312, 426, 575, 885, 903
TscAI CASTG 3 cut(s) 33, 391, 396
TseFI GTSAC 1 cut(s) 382
TseI GCWGC 1 cut(s) 532
Tsp45I GTSAC 1 cut(s) 382
TspDTI ATGAA 7 cut(s) 62, 575, 639, 854, 1086, 1173, 1297
TspGWI ACGGA 1 cut(s) 461
TspRI CASTG 3 cut(s) 33, 391, 396
VpaK11BI GGWCC 2 cut(s) 448, 1129
XapI RAATTY 2 cut(s) 464, 1185
XceI RCATGY 2 cut(s) 116, 539
XmnI GAANNNNTTC 1 cut(s) 1241
XspI CTAG 1 cut(s) 132
Zsp2I ATGCAT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.