Rmu_sc0003158.1_g000009

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003158.1
OG0000090
Physical Location & Seq
Reverse (-)
44081 .. 46956
2876 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003158.1_g000009.1.cds

Sequence Viewer

Length: 1221 bp
atggctaataatgtgtcagctagacctactatgcgtgagaatgtgccagcaacgccaactatgacagataatgcatttgctccccctactgtgcgtgaaaatgtgccagcaacaactactgtacatgctcatgtcagtcaagtacgagcaagagctaacacgccaccaagagctaatttgccaccacaaaccaacgtgccactaccagctaacgtggctccatcaattcatcaactgcctacccaacaagaaatcccttttgtggccattggaatgaaaaggaagcgtggtaaatcctgtggtaaagctcttcaggagcttataaaggctaatggtggacctctgcgtgttgactttcatccgaccattcatgtcccttctgatgacacaatttctaaaatgtttacttctgagataggaattactattcggggtggggcaccagtatgcaaatatggctggtctgatattgatgaagaagatgataagaggttgctaagagaggaattgcgggtgttctttacggtggacttaactgatccagctgttgttgcatatgtggattccaaaatgtctactgcctattcccaattcaagactcgactaaagaaggaatggaaagcatttggctcacctgagctaggaagagcaaacttgcctagtgcagatttatggaatgggagacctgtctcacattggcactggctttgtgacaacatatacaccaaccagtcttgcattgagattgcggaaaagaattctgctaacaggtatatgcaacaacatactcacagagctggtgcacggccatacgtgcaacatgctttggtggcctctaaggagaagatggaggctgagaggaatgcccttttacagaagttgtaccaagaggcacccgagggtactgcacatgattctatcaaactgactttggaagctgagtacccaataatggctaaggagcttgggaggaagggtaggatgatccatggcattggtaacatccctcacatacgttctaacatacgtagagtatctgcatggggtggcaacaattctgaggtagctgaactgcgtgatcttatcgaccaacttacctttaacatgctcagtatgaaggaacaaaatggactattgaaggctcaagtggaatgtttattgcggcaatctcctgggcagatgagtgaggatgacttcccccatcctagcaccaacttctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transposase_24

Protein Analysis

406

Amino Acids

45.36

Weight (kDa)

8.84

Isoelectric Point (pI)

56.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 323
AccB1I GGYRCC 2 cut(s) 439, 892
AccI GTMKAC 1 cut(s) 575
AciI CCGC 3 cut(s) 511, 749, 1162
AclWI GGATC 2 cut(s) 533, 979
AcoI YGGCCR 2 cut(s) 264, 806
AcsI RAATTY 1 cut(s) 757
AcuI CTGAAG 1 cut(s) 296
AfaI GTAC 5 cut(s) 123, 144, 884, 904, 944
AfiI CCNNNNNNNGG 3 cut(s) 262, 641, 952
AgsI TTSAA 2 cut(s) 595, 1138
AjnI CCWGG 1 cut(s) 1171
Alw21I GWGCWC 1 cut(s) 805
Alw26I GTCTC 2 cut(s) 676, 694
Alw44I GTGCAC 1 cut(s) 801
AlwI GGATC 2 cut(s) 533, 979
Ama87I CYCGRG 1 cut(s) 896
AoxI GGCC 3 cut(s) 264, 806, 831
ApaLI GTGCAC 1 cut(s) 801
ApoI RAATTY 1 cut(s) 757
AspS9I GGNCC 1 cut(s) 338
AsuHPI GGTGA 1 cut(s) 624
AvaI CYCGRG 1 cut(s) 896
AvaII GGWCC 1 cut(s) 338
BaeGI GKGCMC 2 cut(s) 442, 805
BalI TGGCCA 1 cut(s) 266
BanI GGYRCC 2 cut(s) 439, 892
Bbv12I GWGCWC 1 cut(s) 805
BccI CCATC 3 cut(s) 229, 841, 1209
BceAI ACGGC 1 cut(s) 821
BcgI CGANNNNNNTGC 2 cut(s) 887, 921
BciT130I CCWGG 1 cut(s) 1173
BcoDI GTCTC 2 cut(s) 676, 694
BfaI CTAG 4 cut(s) 21, 641, 660, 1206
BisI GCNGC 1 cut(s) 1163
BlsI GCNGC 1 cut(s) 1164
Bme1390I CCNGG 1 cut(s) 1173
Bme18I GGWCC 1 cut(s) 338
BmeT110I CYCGRG 1 cut(s) 896
BmgT120I GGNCC 1 cut(s) 338
BmiI GGNNCC 3 cut(s) 219, 441, 894
BmrFI CCNGG 1 cut(s) 1173
Bpu10I CCTNAGC 2 cut(s) 636, 957
BpuEI CTTGAG 1 cut(s) 1128
BsaAI YACGTR 2 cut(s) 814, 1028
BsaI GGTCTC 1 cut(s) 676
BsaJI CCNNGG 3 cut(s) 897, 988, 1172
BsaXI ACNNNNNCTCC 2 cut(s) 961, 991
Bsc4I CCNNNNNNNGG 3 cut(s) 262, 641, 952
Bse1I ACTGG 3 cut(s) 443, 707, 730
BseBI CCWGG 1 cut(s) 1173
BseDI CCNNGG 3 cut(s) 897, 988, 1172
BseGI GGATG 5 cut(s) 358, 987, 1002, 1195, 1201
BseLI CCNNNNNNNGG 3 cut(s) 262, 641, 952
BseMII CTCAG 6 cut(s) 402, 627, 846, 930, 1050, 1123
BseNI ACTGG 3 cut(s) 443, 707, 730
BseSI GKGCMC 2 cut(s) 442, 805
BsgI GTGCAG 2 cut(s) 684, 891
BshFI GGCC 3 cut(s) 266, 808, 833
BshNI GGYRCC 2 cut(s) 439, 892
BsiHKAI GWGCWC 1 cut(s) 805
BsiHKCI CYCGRG 1 cut(s) 896
BslFI GGGAC 1 cut(s) 359
BslI CCNNNNNNNGG 3 cut(s) 262, 641, 952
BsmAI GTCTC 2 cut(s) 676, 694
BsmFI GGGAC 1 cut(s) 359
BsmI GAATGC 1 cut(s) 868
BsnI GGCC 3 cut(s) 266, 808, 833
Bso31I GGTCTC 1 cut(s) 676
BsoBI CYCGRG 1 cut(s) 896
Bsp1286I GDGCHC 2 cut(s) 442, 805
Bsp1407I TGTACA 1 cut(s) 121
Bsp143I GATC 3 cut(s) 538, 984, 1078
Bsp19I CCATGG 1 cut(s) 988
BspACI CCGC 3 cut(s) 511, 749, 1162
BspANI GGCC 3 cut(s) 266, 808, 833
BspCNI CTCAG 6 cut(s) 403, 628, 847, 931, 1051, 1122
BspLI GGNNCC 3 cut(s) 219, 441, 894
BspPI GGATC 2 cut(s) 533, 979
BspQI GCTCTTC 2 cut(s) 315, 640
BspT107I GGYRCC 2 cut(s) 439, 892
BspTNI GGTCTC 1 cut(s) 676
BsrGI TGTACA 1 cut(s) 121
BsrI ACTGG 3 cut(s) 443, 707, 730
BssECI CCNNGG 3 cut(s) 897, 988, 1172
BssMI GATC 3 cut(s) 538, 984, 1078
BssT1I CCWWGG 1 cut(s) 988
Bst2UI CCWGG 1 cut(s) 1173
Bst4CI ACNGT 3 cut(s) 91, 121, 526
Bst6I CTCTTC 2 cut(s) 315, 640
BstAUI TGTACA 1 cut(s) 121
BstBAI YACGTR 2 cut(s) 814, 1028
BstC8I GCNNGC 2 cut(s) 48, 108
BstDEI CTNAG 9 cut(s) 411, 497, 636, 837, 855, 939, 957, 1059, 1109
BstDSI CCRYGG 1 cut(s) 988
BstENI CCTNNNNNAGG 1 cut(s) 639
BstF5I GGATG 5 cut(s) 358, 987, 1002, 1195, 1201
BstKTI GATC 3 cut(s) 541, 987, 1081
BstMAI GTCTC 2 cut(s) 676, 694
BstMBI GATC 3 cut(s) 538, 984, 1078
BstMWI GCNNNNNNNGC 6 cut(s) 52, 215, 456, 551, 814, 830
BstNI CCWGG 1 cut(s) 1173
BstNSI RCATGY 3 cut(s) 128, 824, 1108
BstSCI CCNGG 1 cut(s) 1171
BstSLI GKGCMC 2 cut(s) 442, 805
BstSNI TACGTA 1 cut(s) 1028
BstXI CCANNNNNNTGG 1 cut(s) 995
BsuRI GGCC 3 cut(s) 266, 808, 833
BtgI CCRYGG 1 cut(s) 988
BtsCI GGATG 5 cut(s) 358, 987, 1002, 1195, 1201
BtsIMutI CAGTG 1 cut(s) 700
Cac8I GCNNGC 2 cut(s) 48, 108
Cfr13I GGNCC 1 cut(s) 338
Csp6I GTAC 5 cut(s) 122, 143, 883, 903, 943
CviAII CATG 8 cut(s) 125, 131, 371, 821, 911, 989, 1041, 1105
CviQI GTAC 5 cut(s) 122, 143, 883, 903, 943
DdeI CTNAG 9 cut(s) 411, 497, 636, 837, 855, 939, 957, 1059, 1109
DpnI GATC 3 cut(s) 540, 986, 1080
DpnII GATC 3 cut(s) 538, 984, 1078
EaeI YGGCCR 2 cut(s) 264, 806
Eam1104I CTCTTC 2 cut(s) 315, 640
EarI CTCTTC 2 cut(s) 315, 640
Eco105I TACGTA 1 cut(s) 1028
Eco130I CCWWGG 1 cut(s) 988
Eco31I GGTCTC 1 cut(s) 676
Eco47I GGWCC 1 cut(s) 338
Eco57I CTGAAG 1 cut(s) 296
Eco88I CYCGRG 1 cut(s) 896
EcoNI CCTNNNNNAGG 1 cut(s) 639
EcoRI GAATTC 1 cut(s) 757
EcoRII CCWGG 1 cut(s) 1171
EcoT14I CCWWGG 1 cut(s) 988
EcoT22I ATGCAT 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 988
FaeI CATG 8 cut(s) 128, 134, 374, 824, 914, 992, 1044, 1108
FaqI GGGAC 1 cut(s) 359
FatI CATG 8 cut(s) 124, 130, 370, 820, 910, 988, 1040, 1104
FauI CCCGC 1 cut(s) 504
FauNDI CATATG 1 cut(s) 556
FblI GTMKAC 1 cut(s) 575
Fnu4HI GCNGC 1 cut(s) 1163
FokI GGATG 5 cut(s) 345, 989, 994, 1188, 1202
Fsp4HI GCNGC 1 cut(s) 1163
FspBI CTAG 4 cut(s) 21, 641, 660, 1206
GluI GCNGC 1 cut(s) 1163
HaeIII GGCC 3 cut(s) 266, 808, 833
Hin1II CATG 8 cut(s) 128, 134, 374, 824, 914, 992, 1044, 1108
HincII GTYRAC 1 cut(s) 352
HindII GTYRAC 1 cut(s) 352
HinfI GANTC 3 cut(s) 563, 598, 914
HphI GGTGA 1 cut(s) 624
Hpy166II GTNNAC 6 cut(s) 338, 352, 405, 529, 576, 803
Hpy188I TCNGA 5 cut(s) 363, 382, 412, 466, 1060
Hpy188III TCNNGA 2 cut(s) 314, 595
Hpy8I GTNNAC 6 cut(s) 338, 352, 405, 529, 576, 803
HpyAV CCTTC 5 cut(s) 387, 604, 967, 1111, 1132
HpyCH4III ACNGT 3 cut(s) 91, 121, 526
HpyCH4IV ACGT 5 cut(s) 195, 213, 813, 1015, 1027
HpyF10VI GCNNNNNNNGC 6 cut(s) 52, 215, 456, 551, 814, 830
HpyF3I CTNAG 9 cut(s) 411, 497, 636, 837, 855, 939, 957, 1059, 1109
HpySE526I ACGT 5 cut(s) 195, 213, 813, 1015, 1027
Hsp92II CATG 8 cut(s) 128, 134, 374, 824, 914, 992, 1044, 1108
Kzo9I GATC 3 cut(s) 538, 984, 1078
LguI GCTCTTC 2 cut(s) 315, 640
LmnI GCTCC 4 cut(s) 85, 223, 316, 961
MaeI CTAG 4 cut(s) 21, 641, 660, 1206
MaeII ACGT 5 cut(s) 195, 213, 813, 1015, 1027
MaeIII GTNAC 2 cut(s) 710, 998
MalI GATC 3 cut(s) 540, 986, 1080
MboI GATC 3 cut(s) 538, 984, 1078
MboII GAAGA 5 cut(s) 302, 488, 491, 657, 856
MhlI GDGCHC 2 cut(s) 442, 805
MlsI TGGCCA 1 cut(s) 266
MluCI AATT 8 cut(s) 175, 225, 390, 420, 506, 590, 757, 1054
MluNI TGGCCA 1 cut(s) 266
MlyI GAGTC 1 cut(s) 592
MmeI TCCRAC 1 cut(s) 386
Mox20I TGGCCA 1 cut(s) 266
Mph1103I ATGCAT 1 cut(s) 76
MscI TGGCCA 1 cut(s) 266
MseI TTAA 2 cut(s) 533, 1101
MslI CAYNNNNRTG 3 cut(s) 129, 272, 445
Msp20I TGGCCA 1 cut(s) 266
MspA1I CMGCKG 1 cut(s) 545
MspR9I CCNGG 1 cut(s) 1173
Mva1269I GAATGC 1 cut(s) 868
MvaI CCWGG 1 cut(s) 1173
MwoI GCNNNNNNNGC 6 cut(s) 52, 215, 456, 551, 814, 830
NcoI CCATGG 1 cut(s) 988
NdeI CATATG 1 cut(s) 556
NdeII GATC 3 cut(s) 538, 984, 1078
NlaIII CATG 8 cut(s) 128, 134, 374, 824, 914, 992, 1044, 1108
NlaIV GGNNCC 3 cut(s) 219, 441, 894
NmuCI GTSAC 1 cut(s) 710
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 3 cut(s) 128, 824, 1108
PciSI GCTCTTC 2 cut(s) 315, 640
PctI GAATGC 1 cut(s) 868
PfeI GAWTC 2 cut(s) 563, 914
PkrI GCNGC 1 cut(s) 1164
PleI GAGTC 1 cut(s) 592
PpsI GAGTC 1 cut(s) 592
Ppu21I YACGTR 2 cut(s) 814, 1028
PsiI TTATAA 1 cut(s) 323
Psp6I CCWGG 1 cut(s) 1171
PspGI CCWGG 1 cut(s) 1171
PspN4I GGNNCC 3 cut(s) 219, 441, 894
PspPI GGNCC 1 cut(s) 338
PvuII CAGCTG 1 cut(s) 545
RsaI GTAC 5 cut(s) 123, 144, 884, 904, 944
RsaNI GTAC 5 cut(s) 122, 143, 883, 903, 943
RseI CAYNNNNRTG 3 cut(s) 129, 272, 445
SapI GCTCTTC 2 cut(s) 315, 640
SaqAI TTAA 2 cut(s) 533, 1101
SatI GCNGC 1 cut(s) 1163
Sau3AI GATC 3 cut(s) 538, 984, 1078
Sau96I GGNCC 1 cut(s) 338
SchI GAGTC 1 cut(s) 592
ScrFI CCNGG 1 cut(s) 1173
SduI GDGCHC 2 cut(s) 442, 805
SinI GGWCC 1 cut(s) 338
SmiMI CAYNNNNRTG 3 cut(s) 129, 272, 445
SmlI CTYRAG 1 cut(s) 1143
SmoI CTYRAG 1 cut(s) 1143
SnaBI TACGTA 1 cut(s) 1028
Sse9I AATT 8 cut(s) 175, 225, 390, 420, 506, 590, 757, 1054
SsiI CCGC 3 cut(s) 511, 749, 1162
SspMI CTAG 4 cut(s) 21, 641, 660, 1206
StyD4I CCNGG 1 cut(s) 1171
StyI CCWWGG 1 cut(s) 988
TaaI ACNGT 3 cut(s) 91, 121, 526
TaiI ACGT 5 cut(s) 198, 216, 816, 1018, 1030
TaqI TCGA 2 cut(s) 601, 1086
TasI AATT 8 cut(s) 175, 225, 390, 420, 506, 590, 757, 1054
TatI WGTACW 1 cut(s) 121
TauI GCSGC 1 cut(s) 1165
TfiI GAWTC 2 cut(s) 563, 914
Tru1I TTAA 2 cut(s) 533, 1101
Tru9I TTAA 2 cut(s) 533, 1101
TscAI CASTG 1 cut(s) 707
TseFI GTSAC 1 cut(s) 710
Tsp45I GTSAC 1 cut(s) 710
TspDTI ATGAA 6 cut(s) 218, 290, 347, 359, 489, 1130
TspRI CASTG 1 cut(s) 707
VneI GTGCAC 1 cut(s) 801
VpaK11BI GGWCC 1 cut(s) 338
XagI CCTNNNNNAGG 1 cut(s) 639
XapI RAATTY 1 cut(s) 757
XceI RCATGY 3 cut(s) 128, 824, 1108
XmiI GTMKAC 1 cut(s) 575
XspI CTAG 4 cut(s) 21, 641, 660, 1206
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.