Rmu_sc0001731.1_g000001

TMV resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001731.1
OG0000090
Physical Location & Seq
Forward (+)
1 .. 2464
2464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001731.1_g000001.1.cds

Sequence Viewer

Length: 1175 bp
gtgaagcaggtcagaatgtttcttatgcacaggccaggaaaacccgtggcattacacaggggttgggaactcaagctctgatcaatgcttgcaagcagaggatttcaatccgtacgaatggtgagcacaagctcccccagaatgttcgagccaatattaagtttaggtcagagattgggatacaaacgcgtcagaatgctccacttatggtcaagcgctggaaagaagtctctgcttcggataaggaaaaaatcaccaaggccttggcgattaagtttgattttgatggtacggacccggttgtaaggaaatttattgaggctcatatgtccaagtcgtactcactatggaggagcaggctgaacaaacattacaagcagcatgcttatgaccctgaatatgcacgggcacaccctcccgtaaagctgttttataatagagaaatggctgaatgggagtggttgtgtgatgaattattcacagatgaggactatcagaaacgttgcaagataaactctgctaaccggaataagcaagaatacgatcatcttgagagtttaccactttacccgaaacatatagcagctgcacaagagatgccagtagaatcaataaaaaaggattctgagtatgatgatgatgaggatgatgttgatgataatggtaatgatgatgatgatgatgataatgatgttgattataatgttgatgatgattatgttggttataatgatcatgttgatgctaatgatgaggatgatgttgatgataatgttggaagaaacctagaagttgaggttgataatgttgaagagcgtggaaatcaaagtgtatccaccaataccgagaaaagtagtggaaagagaaagctctcatcctttaccaatgtgcatggtgagagttcaaagaagagacgtgaaatagctgagcaaagatgtaccgattctgcacctctgcgtggtaatgatgaggttcaatcagtttcaaaggaggttagcgatgaagaatacttgatgcaatgttttggaattttgaacaagatggacgaaattgatgatgacagttattcaaaagccctgaagctcttccgcggcgatgctacttggagaaagctgtttgtgggaatgccggagaagaggagaaaaaacttcatcctcaatcttttctgtacatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC TIR

Protein Analysis

390

Amino Acids

45.1

Weight (kDa)

5.08

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 434, 701, 728
AccII CGCG 2 cut(s) 189, 1091
AciI CCGC 2 cut(s) 1089, 1091
AclI AACGTT 1 cut(s) 501
AcsI RAATTY 2 cut(s) 310, 1028
AcuI CTGAAG 1 cut(s) 1099
AfaI GTAC 5 cut(s) 114, 291, 340, 939, 1170
AfeI AGCGCT 1 cut(s) 217
AfiI CCNNNNNNNGG 1 cut(s) 958
AflIII ACRYGT 1 cut(s) 187
AgsI TTSAA 7 cut(s) 107, 811, 905, 976, 986, 1035, 1070
AjiI CACGTC 1 cut(s) 916
AjnI CCWGG 1 cut(s) 34
AluBI AGCT 8 cut(s) 76, 132, 426, 586, 870, 925, 1083, 1113
AluI AGCT 8 cut(s) 76, 132, 426, 586, 870, 925, 1083, 1113
Alw21I GWGCWC 1 cut(s) 128
Alw26I GTCTC 2 cut(s) 234, 906
Aor51HI AGCGCT 1 cut(s) 217
AoxI GGCC 2 cut(s) 32, 260
ApeKI GCWGC 3 cut(s) 378, 583, 586
ApoI RAATTY 2 cut(s) 310, 1028
Asp700I GAANNNNTTC 1 cut(s) 1084
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 1 cut(s) 294
AsuC2I CCSGG 1 cut(s) 298
AsuHPI GGTGA 3 cut(s) 133, 246, 907
AvaII GGWCC 1 cut(s) 294
BaeGI GKGCMC 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 128
BbvI GCAGC 3 cut(s) 390, 573, 595
BccI CCATC 2 cut(s) 280, 1035
BciT130I CCWGG 1 cut(s) 36
BciVI GTATCC 2 cut(s) 173, 843
BclI TGATCA 2 cut(s) 80, 732
BcnI CCSGG 1 cut(s) 298
BcoDI GTCTC 2 cut(s) 234, 906
BfaI CTAG 1 cut(s) 787
BfoI RGCGCY 1 cut(s) 219
BfuI GTATCC 2 cut(s) 173, 843
BisI GCNGC 4 cut(s) 379, 584, 587, 1092
BlpI GCTNAGC 1 cut(s) 926
BlsI GCNGC 4 cut(s) 380, 585, 588, 1093
Bme1390I CCNGG 2 cut(s) 36, 298
Bme18I GGWCC 1 cut(s) 294
BmgBI CACGTC 1 cut(s) 916
BmgT120I GGNCC 1 cut(s) 294
BmiI GGNNCC 1 cut(s) 296
BmrFI CCNGG 2 cut(s) 36, 298
BmsI GCATC 4 cut(s) 587, 732, 1004, 1086
Bpu1102I GCTNAGC 1 cut(s) 926
BpuEI CTTGAG 2 cut(s) 56, 571
BpuMI CCSGG 1 cut(s) 298
BsaBI GATNNNNATC 1 cut(s) 106
BsaJI CCNNGG 4 cut(s) 45, 257, 263, 1089
BsaWI WCCGGW 1 cut(s) 524
BsaXI ACNNNNNCTCC 2 cut(s) 448, 478
Bsc4I CCNNNNNNNGG 1 cut(s) 958
Bse1I ACTGG 1 cut(s) 601
Bse3DI GCAATG 1 cut(s) 1024
Bse8I GATNNNNATC 1 cut(s) 106
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 4 cut(s) 45, 257, 263, 1089
BseGI GGATG 4 cut(s) 651, 762, 874, 1151
BseJI GATNNNNATC 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 958
BseMI GCAATG 1 cut(s) 1024
BseMII CTCAG 2 cut(s) 617, 917
BseNI ACTGG 1 cut(s) 601
BseRI GAGGAG 2 cut(s) 366, 1152
BseSI GKGCMC 1 cut(s) 411
BseXI GCAGC 3 cut(s) 390, 573, 595
BsgI GTGCAG 2 cut(s) 572, 932
Bsh1236I CGCG 2 cut(s) 189, 1091
BshFI GGCC 2 cut(s) 34, 262
BsiHKAI GWGCWC 1 cut(s) 128
BsiSI CCGG 3 cut(s) 298, 525, 1129
BsiWI CGTACG 1 cut(s) 112
BslI CCNNNNNNNGG 1 cut(s) 958
BsmAI GTCTC 2 cut(s) 234, 906
BsmBI CGTCTC 1 cut(s) 906
BsmI GAATGC 2 cut(s) 201, 1130
BsnI GGCC 2 cut(s) 34, 262
Bsp1286I GDGCHC 2 cut(s) 128, 411
Bsp1407I TGTACA 1 cut(s) 1168
Bsp143I GATC 3 cut(s) 80, 543, 732
Bsp1720I GCTNAGC 1 cut(s) 926
BspACI CCGC 2 cut(s) 1089, 1091
BspANI GGCC 2 cut(s) 34, 262
BspCNI CTCAG 2 cut(s) 618, 918
BspFNI CGCG 2 cut(s) 189, 1091
BspLI GGNNCC 1 cut(s) 296
BspQI GCTCTTC 2 cut(s) 806, 1090
BsrDI GCAATG 1 cut(s) 1024
BsrGI TGTACA 1 cut(s) 1168
BsrI ACTGG 1 cut(s) 601
BssECI CCNNGG 4 cut(s) 45, 257, 263, 1089
BssMI GATC 3 cut(s) 80, 543, 732
BssT1I CCWWGG 2 cut(s) 257, 263
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 1063
Bst6I CTCTTC 4 cut(s) 806, 904, 1090, 1129
BstAUI TGTACA 1 cut(s) 1168
BstC8I GCNNGC 4 cut(s) 90, 94, 358, 383
BstDEI CTNAG 2 cut(s) 626, 926
BstDSI CCRYGG 2 cut(s) 45, 1089
BstF5I GGATG 4 cut(s) 651, 762, 874, 1151
BstFNI CGCG 2 cut(s) 189, 1091
BstH2I RGCGCY 1 cut(s) 219
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 3 cut(s) 83, 546, 735
BstMAI GTCTC 2 cut(s) 234, 906
BstMBI GATC 3 cut(s) 80, 543, 732
BstNI CCWGG 1 cut(s) 36
BstNSI RCATGY 1 cut(s) 385
BstSCI CCNGG 2 cut(s) 34, 296
BstSLI GKGCMC 1 cut(s) 411
BstUI CGCG 2 cut(s) 189, 1091
BstV1I GCAGC 3 cut(s) 390, 573, 595
BstXI CCANNNNNNTGG 1 cut(s) 264
BsuI GTATCC 2 cut(s) 173, 843
BsuRI GGCC 2 cut(s) 34, 262
BtgI CCRYGG 2 cut(s) 45, 1089
BtgZI GCGATG 2 cut(s) 1013, 1109
BtrI CACGTC 1 cut(s) 916
BtsCI GGATG 4 cut(s) 651, 762, 874, 1151
Cac8I GCNNGC 4 cut(s) 90, 94, 358, 383
CfoI GCGC 1 cut(s) 218
Cfr13I GGNCC 1 cut(s) 294
Cfr42I CCGCGG 1 cut(s) 1092
CseI GACGC 1 cut(s) 178
Csp6I GTAC 5 cut(s) 113, 290, 339, 938, 1169
CviAII CATG 4 cut(s) 382, 736, 892, 1172
CviQI GTAC 5 cut(s) 113, 290, 339, 938, 1169
DdeI CTNAG 2 cut(s) 626, 926
DpnI GATC 3 cut(s) 82, 545, 734
DpnII GATC 3 cut(s) 80, 543, 732
Eam1104I CTCTTC 4 cut(s) 806, 904, 1090, 1129
EarI CTCTTC 4 cut(s) 806, 904, 1090, 1129
Eco130I CCWWGG 2 cut(s) 257, 263
Eco147I AGGCCT 1 cut(s) 262
Eco47I GGWCC 1 cut(s) 294
Eco47III AGCGCT 1 cut(s) 217
Eco57I CTGAAG 1 cut(s) 1099
EcoRII CCWGG 1 cut(s) 34
EcoT14I CCWWGG 2 cut(s) 257, 263
ErhI CCWWGG 2 cut(s) 257, 263
Esp3I CGTCTC 1 cut(s) 906
FaeI CATG 4 cut(s) 385, 739, 895, 1175
FatI CATG 4 cut(s) 381, 735, 891, 1171
FauNDI CATATG 1 cut(s) 326
FbaI TGATCA 2 cut(s) 80, 732
Fnu4HI GCNGC 4 cut(s) 379, 584, 587, 1092
FokI GGATG 4 cut(s) 658, 769, 861, 1138
Fsp4HI GCNGC 4 cut(s) 379, 584, 587, 1092
FspBI CTAG 1 cut(s) 787
GlaI GCGC 1 cut(s) 217
GluI GCNGC 4 cut(s) 379, 584, 587, 1092
HaeII RGCGCY 1 cut(s) 219
HaeIII GGCC 2 cut(s) 34, 262
HapII CCGG 3 cut(s) 298, 525, 1129
HgaI GACGC 1 cut(s) 178
HhaI GCGC 1 cut(s) 218
Hin1II CATG 4 cut(s) 385, 739, 895, 1175
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HinfI GANTC 3 cut(s) 607, 622, 943
HpaII CCGG 3 cut(s) 298, 525, 1129
HphI GGTGA 3 cut(s) 133, 246, 907
Hpy166II GTNNAC 1 cut(s) 559
Hpy188I TCNGA 7 cut(s) 14, 80, 171, 194, 240, 497, 627
Hpy188III TCNNGA 1 cut(s) 550
Hpy8I GTNNAC 1 cut(s) 559
HpyCH4III ACNGT 1 cut(s) 1063
HpyCH4IV ACGT 2 cut(s) 501, 915
HpyCH4V TGCA 8 cut(s) 28, 92, 403, 506, 589, 891, 949, 1017
HpyF3I CTNAG 2 cut(s) 626, 926
HpySE526I ACGT 2 cut(s) 501, 915
Hsp92II CATG 4 cut(s) 385, 739, 895, 1175
HspAI GCGC 1 cut(s) 216
Ksp22I TGATCA 2 cut(s) 80, 732
KspI CCGCGG 1 cut(s) 1092
Kzo9I GATC 3 cut(s) 80, 543, 732
LguI GCTCTTC 2 cut(s) 806, 1090
LmnI GCTCC 3 cut(s) 137, 204, 353
Lsp1109I GCAGC 3 cut(s) 390, 573, 595
LweI GCATC 4 cut(s) 587, 732, 1004, 1086
MaeI CTAG 1 cut(s) 787
MaeII ACGT 2 cut(s) 501, 915
MalI GATC 3 cut(s) 82, 545, 734
MboI GATC 3 cut(s) 80, 543, 732
MboII GAAGA 6 cut(s) 791, 823, 921, 1015, 1077, 1146
MhlI GDGCHC 2 cut(s) 128, 411
MluCI AATT 4 cut(s) 310, 472, 1028, 1049
MluI ACGCGT 1 cut(s) 187
MmeI TCCRAC 1 cut(s) 756
MroXI GAANNNNTTC 1 cut(s) 1084
MseI TTAA 2 cut(s) 158, 272
MslI CAYNNNNRTG 2 cut(s) 386, 740
MspA1I CMGCKG 2 cut(s) 586, 1091
MspI CCGG 3 cut(s) 298, 525, 1129
MspR9I CCNGG 2 cut(s) 36, 298
Mva1269I GAATGC 2 cut(s) 201, 1130
MvaI CCWGG 1 cut(s) 36
MvnI CGCG 2 cut(s) 189, 1091
NciI CCSGG 1 cut(s) 298
NdeI CATATG 1 cut(s) 326
NdeII GATC 3 cut(s) 80, 543, 732
NlaIII CATG 4 cut(s) 385, 739, 895, 1175
NlaIV GGNNCC 1 cut(s) 296
NspI RCATGY 1 cut(s) 385
PaeI GCATGC 1 cut(s) 385
PceI AGGCCT 1 cut(s) 262
PciSI GCTCTTC 2 cut(s) 806, 1090
PctI GAATGC 2 cut(s) 201, 1130
PdmI GAANNNNTTC 1 cut(s) 1084
PfeI GAWTC 3 cut(s) 607, 622, 943
Pfl23II CGTACG 1 cut(s) 112
PkrI GCNGC 4 cut(s) 380, 585, 588, 1093
PsiI TTATAA 3 cut(s) 434, 701, 728
Psp1406I AACGTT 1 cut(s) 501
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
PspLI CGTACG 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 296
PspPI GGNCC 1 cut(s) 294
PsrI GAACNNNNNNTAC 2 cut(s) 355, 387
PvuII CAGCTG 1 cut(s) 586
RsaI GTAC 5 cut(s) 114, 291, 340, 939, 1170
RsaNI GTAC 5 cut(s) 113, 290, 339, 938, 1169
RseI CAYNNNNRTG 2 cut(s) 386, 740
SacII CCGCGG 1 cut(s) 1092
SapI GCTCTTC 2 cut(s) 806, 1090
SaqAI TTAA 2 cut(s) 158, 272
SatI GCNGC 4 cut(s) 379, 584, 587, 1092
Sau3AI GATC 3 cut(s) 80, 543, 732
Sau96I GGNCC 1 cut(s) 294
ScrFI CCNGG 2 cut(s) 36, 298
SduI GDGCHC 2 cut(s) 128, 411
SfaNI GCATC 4 cut(s) 587, 732, 1004, 1086
Sfr303I CCGCGG 1 cut(s) 1092
SgrBI CCGCGG 1 cut(s) 1092
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 2 cut(s) 386, 740
SmlI CTYRAG 2 cut(s) 71, 550
SmoI CTYRAG 2 cut(s) 71, 550
SphI GCATGC 1 cut(s) 385
Sse9I AATT 4 cut(s) 310, 472, 1028, 1049
SseBI AGGCCT 1 cut(s) 262
SsiI CCGC 2 cut(s) 1089, 1091
SspI AATATT 1 cut(s) 156
SspMI CTAG 1 cut(s) 787
StuI AGGCCT 1 cut(s) 262
StyD4I CCNGG 2 cut(s) 34, 296
StyI CCWWGG 2 cut(s) 257, 263
TaaI ACNGT 1 cut(s) 1063
TaiI ACGT 2 cut(s) 504, 918
TaqI TCGA 1 cut(s) 147
TasI AATT 4 cut(s) 310, 472, 1028, 1049
TatI WGTACW 1 cut(s) 1168
TauI GCSGC 1 cut(s) 1094
TfiI GAWTC 3 cut(s) 607, 622, 943
Tru1I TTAA 2 cut(s) 158, 272
Tru9I TTAA 2 cut(s) 158, 272
TseI GCWGC 3 cut(s) 378, 583, 586
TspDTI ATGAA 3 cut(s) 485, 1016, 1140
TspGWI ACGGA 2 cut(s) 100, 307
VpaK11BI GGWCC 1 cut(s) 294
XapI RAATTY 2 cut(s) 310, 1028
XceI RCATGY 1 cut(s) 385
XmnI GAANNNNTTC 1 cut(s) 1084
XspI CTAG 1 cut(s) 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.