Rorug04G0365300

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000090
Physical Location & Seq
Forward (+)
53727465 .. 53730907
3443 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0365300.1

Sequence Viewer

Length: 1734 bp
ATGGCGGCCAAAATTGGGTCGTTCCGGCACAGTTTCGCGGAGAGGAGCAAGGAGAGGCTGCTCTCACGAAAAGGGTACTCGGATTTCGGGCTCAACAGCTCCGAATGCGGCGATGAGAGAGTGAAATGCGGCTGGTTTGGGAGAATGTCCGATGGGTTGGTCAACTTCTGCAACAGCGTTCAGGAGGTTTCGGTTAAACTGTATCAAATGGGCCGCTCCGATCCTCGGAAAGCTTACTTCGCCGCCAAGATGGGCATGTCGCTGGCGATTGTGTCACTGCTCATATTTTTCAAGGAGCCCCTCAAAGATGCTAGCCAATATTCCATCTGGGCGATTCTCACCGTTGTCGTCGTTTTCGAATTCAGCATAGGTGCGACGTTGAACAAAGGGTTTAATCGTGCTTTGGGGACAATTTCGGCTGGAGGGCTAGCTCTAGGTATAGCAGAGTTGGCTGTAATGGCCGGAAGTTGGCAGGAGGTTGTGATTGTAGTCAATATCTTCATAGCAGGTTTTCTTGCTAGCTATATCAAGCTTTATCCCCCAATGAAGACTTATGAATACGGATTTCGGGTGTTCTTGTTGACATACTGTATAGTTTTGGTATCCGGGAGTACATCATCATTTTTCGGAACAGCAATTTATCGATTGATACTTATTGGAGTGGGTGCTGCTGTCTGTTTGGTTATAAACATATGCATACTTCCCATCTGGGCAGGGGAGGATCTCCACAAGCTGGTGGTGAAAAATTTCAAGGGTGTTGCTACTTCTTTGGAAGGTGTTGTTAATGGATATCTGCAATGTGTTGAGTACGAGAGAATTCCTTCGAAAATTCTCACATACCAAGCTTCTGATGAACCATTGTATAATGGATATAGAGCCACTATACAATCTTCAACCCAAGAGGAAACCCTGTTAGACTTTGCACTATGGGAGCCACCACATGGCCCTTATAGGTCATTCCATTATCCTTGGAGAAATTATGTCAGAGTTGGTGGTTCTCTGAGGCACTGTGCATTCATGGTCATGGCAATGCATGGATGCATTCTTTCAGAAATTCAGGCGCCACCAGAAAAGAGACAGGTTTTTGCAGATGAGCTCCTGAGAGTTGGTACTGAAGGTGCTAAAGTATTACGTGAGCTAGGAAGCAAAGTAGAAAGGATGGAAAAATTAAGTCCCAAAGACATACTTTTTGAAGTTCATGAAGCAGCAGAAGACTTGCAGAATAAGATAGACCAGAAGTCGTACCTTCTTGTCAATTATGAAGGCTGGGGACCCGAAATACTAGGGCGCAAATTTGAAGATCCTGAGCAGGATACTAGGAACAATGTGATTGAGTCCCTTAGTGAATCGTGGGATGCTCAGAATATTGGAAGCAGCGGCGGCGGCGGCGATCCTTCAATGTCACAATGGATATCTACAGATAGTGTGTTAAAGAAAACATTAACAGCATGGCCCTCACGCCTTACATCATTCACTGGGAATCTTATGCAACCTCAACCTGAACTAGAAGAATCAAAAGTATATGAAAGCGCGAGCTCCTTATCTTTAGCAACATTTACATCGCTTCTGATTGAGTTTGTGGCAAGGCTTCAAAATCTAGTGGATGAATTTGTAGAGCTTAGTGAGAAAGCAAACTTTAAGGATCCTATGGACGTATCGGATACCAAAGAGGTAGGCGGGTTCTGGACCAGAATATATAGGCGCTGGCGGTCCAAGAATGATGAGTTAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

577

Amino Acids

64.54

Weight (kDa)

5.85

Isoelectric Point (pI)

41.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALMT PF11744 69 - 541 6.8e-178 Aluminium activated malate transporter
FUSC_2 PF13515 106 - 229 1.5e-11 Fusaric acid resistance protein-like
FUSC PF04632 110 - 263 3.1e-07 Fusaric acid resistance protein family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000090)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g18340 FvH4_2g08421 FvH4_3g05430 FvH4_3g26318 FvH4_3g43970 FvH4_5g24831 FvH4_6g20331 FvH4_6g23072 FvH4_7g02471 FvH4_7g02601 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790 FvH4_7g09790
malus_domestica MD09G1277700.v1.1
pyrus_communis pycom14g05970 pycom395g00100
rosa_chinensis RchiOBHm_Chr1g0329081 RchiOBHm_Chr1g0332631 RchiOBHm_Chr1g0341051 RchiOBHm_Chr1g0346821 RchiOBHm_Chr1g0346841 RchiOBHm_Chr1g0377301 RchiOBHm_Chr1g0378881 RchiOBHm_Chr1g0381361 RchiOBHm_Chr2g0094421 RchiOBHm_Chr2g0115791 RchiOBHm_Chr2g0131391 RchiOBHm_Chr3g0469161 RchiOBHm_Chr3g0477491 RchiOBHm_Chr4g0397121 RchiOBHm_Chr4g0403221 RchiOBHm_Chr4g0403811 RchiOBHm_Chr4g0418081 RchiOBHm_Chr4g0434301 RchiOBHm_Chr5g0004171 RchiOBHm_Chr5g0007651 RchiOBHm_Chr5g0025151 RchiOBHm_Chr5g0029021 RchiOBHm_Chr5g0036581 RchiOBHm_Chr5g0040531 RchiOBHm_Chr5g0041581 RchiOBHm_Chr5g0041591 RchiOBHm_Chr5g0055171 RchiOBHm_Chr5g0059931 RchiOBHm_Chr5g0070861 RchiOBHm_Chr5g0072491 RchiOBHm_Chr5g0073831 RchiOBHm_Chr5g0076701 RchiOBHm_Chr6g0264941 RchiOBHm_Chr6g0268711 RchiOBHm_Chr6g0272081 RchiOBHm_Chr7g0180801 RchiOBHm_Chr7g0206041 RchiOBHm_Chr7g0206051 RchiOBHm_Chr7g0206191 RchiOBHm_Chr7g0207401 RchiOBHm_Chr7g0208561 RchiOBHm_Chr7g0208571 RchiOBHm_Chr7g0232661 RchiOBHm_Chr7g0238901
rosa_laevigata RLG00000003152 RLG00000007513 RLG00000010392 RLG00000011803 RLG00000012560 RLG00000014764 RLG00000017712 RLG00000017809 RLG00000017860 RLG00000018875 RLG00000020741 RLG00000021294 RLG00000021737 RLG00000023224 RLG00000023340 RLG00000025142 RLG00000027945 RLG00000028772 RLG00000028775 RLG00000028776 RLG00000029536 RLG00000029993 RLG00000030256 RLG00000030594 RLG00000030697 RLG00000032707 RLG00000035344 RLG00000035458 RLG00000036306 RLG00000036953
rosa_multiflora Rmu_co8065394.1_g000001 Rmu_co8424083.1_g000001 Rmu_sc0000012.1_g000007 Rmu_sc0000073.1_g000003 Rmu_sc0000177.1_g000022 Rmu_sc0000356.1_g000009 Rmu_sc0000433.1_g000025 Rmu_sc0001229.1_g000008 Rmu_sc0001478.1_g000007 Rmu_sc0001552.1_g000046 Rmu_sc0001731.1_g000001 Rmu_sc0001731.1_g000004 Rmu_sc0001942.1_g000088 Rmu_sc0002530.1_g000034 Rmu_sc0002758.1_g000006 Rmu_sc0003033.1_g000034 Rmu_sc0003158.1_g000009 Rmu_sc0003193.1_g000001 Rmu_sc0003314.1_g000041 Rmu_sc0003756.1_g000007 Rmu_sc0003895.1_g000016 Rmu_sc0004149.1_g000005 Rmu_sc0004413.1_g000038 Rmu_sc0004509.1_g000025 Rmu_sc0005142.1_g000008 Rmu_sc0005291.1_g000005 Rmu_sc0005772.1_g000001 Rmu_sc0005962.1_g000002 Rmu_sc0006223.1_g000037 Rmu_sc0006898.1_g000018 Rmu_sc0007822.1_g000006 Rmu_sc0007822.1_g000007 Rmu_sc0015982.1_g000001 Rmu_sc0023577.1_g000001 Rmu_sc0026009.1_g000013 Rmu_ssc0000264.1_g000011 Rmu_ssc0000264.1_g000014 Rmu_ssc0000467.1_g000035
rosa_roxburghii Rroxscaffold_1G00003310 Rroxscaffold_1G00003440 Rroxscaffold_1G00025390 Rroxscaffold_1G00027650 Rroxscaffold_1G00035520 Rroxscaffold_1G00039720 Rroxscaffold_2G00096880 Rroxscaffold_2G00138110 Rroxscaffold_3G00223540 Rroxscaffold_3G00226400 Rroxscaffold_3G00249970 Rroxscaffold_3G00251230 Rroxscaffold_4G00308110 Rroxscaffold_4G00308440 Rroxscaffold_4G00308470 Rroxscaffold_4G00311680 Rroxscaffold_4G00311690 Rroxscaffold_4G00330900 Rroxscaffold_5G00342170 Rroxscaffold_5G00376290 Rroxscaffold_6G00392450 Rroxscaffold_6G00421400 Rroxscaffold_6G00430840 Rroxscaffold_7G00171590 Rroxscaffold_7G00178520 Rroxscaffold_7G00192720
rosa_rugosa Rorug01G0184200 Rorug02G0001800 Rorug02G0296300.1 Rorug02G0296400 Rorug02G0395800 Rorug03G0045600 Rorug03G0045700 Rorug03G0273100 Rorug04G0060900 Rorug04G0073900 Rorug04G0082100 Rorug04G0083700 Rorug04G0140600 Rorug04G0147600 Rorug04G0202000 Rorug04G0365300 Rorug05G0164600 Rorug05G0164700 Rorug05G0164800 Rorug05G0313400 Rorug05G0460400 Rorug05G0460500 Rorug06G0004700 Rorug06G0087800 Rorug07G0040400 Rorug07G0147000 Rorug07G0164100 Rorug07G0183900 Rorug07G0313600
rosa_samantha Rh1AG151200 Rh1AG190200 Rh1AG201300 Rh1AG409200 Rh1BG069600 Rh1BG167900 Rh1BG168100 Rh1BG221200 Rh1BG231700 Rh1BG279700 Rh1BG335200 Rh1CG100500 Rh1CG142400 Rh1CG175600 Rh1CG186200 Rh1CG348700 Rh1DG025200 Rh1DG040900 Rh1DG107900 Rh1DG108000 Rh1DG132100 Rh1DG198700 Rh1DG198900 Rh1DG248100 Rh1DG311000 Rh1DG366700 Rh2AG005300 Rh2AG262100 Rh2CG263100 Rh2CG313000 Rh2CG313100 Rh2CG335400 Rh2CG392500 Rh2CG576000 Rh2DG091000 Rh3AG032000 Rh3BG032400 Rh3CG031100 Rh3CG163600 Rh3CG311100 Rh3DG032000 Rh4AG091500 Rh4BG086500 Rh4BG111300 Rh4BG139900 Rh4CG015000 Rh4CG099800 Rh4DG210900 Rh4DG234600 Rh4DG282500 Rh5AG075100 Rh5AG228600 Rh5AG326300 Rh5AG464100 Rh5BG265900 Rh5BG284000 Rh5BG284900 Rh5CG337600 Rh5CG394700 Rh5DG206500 Rh5DG285000 Rh5DG293700 Rh5DG403900 Rh5DG469800 Rh6AG045500 Rh6AG242800 Rh6BG073100 Rh6BG202400 Rh6CG179100 Rh6CG202800 Rh6DG170800 Rh6DG194300 Rh6DG440100 Rh6DG445600 Rh6DG470700 Rh7BG262200 Rh7BG295500 Rh7BG295800 Rh7CG210600 Rh7CG421500 Rh7DG233400 Rh7DG233500 Rh7DG238100 Rh7DG238200 Rh7DG245500
rosa_wichuraiana Rw1G016920 Rw1G022060 Rw1G028030 Rw2G007760 Rw3G016140 Rw3G020210 Rw4G012320 Rw4G026900 Rw4G034750 Rw5G028220 Rw6G003840 Rw6G004130 Rw7G032360 Rw7G038920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 686
Acc36I ACCTGC 1 cut(s) 497
AccB1I GGYRCC 1 cut(s) 1060
AccB7I CCANNNNNTGG 2 cut(s) 733, 941
AccBSI CCGCTC 1 cut(s) 216
AccII CGCG 2 cut(s) 38, 1532
AclWI GGATC 6 cut(s) 215, 729, 1295, 1385, 1637, 1650
AcoI YGGCCR 2 cut(s) 6, 459
AcsI RAATTY 7 cut(s) 359, 745, 816, 828, 1053, 1292, 1607
AcuI CTGAAG 1 cut(s) 1134
AcyI GRCGYC 1 cut(s) 1061
AfaI GTAC 5 cut(s) 77, 613, 809, 1111, 1244
AfiI CCNNNNNNNGG 5 cut(s) 15, 225, 468, 733, 941
AgsI TTSAA 8 cut(s) 292, 382, 751, 894, 1193, 1298, 1398, 1592
AhdI GACNNNNNGTC 1 cut(s) 1237
Alw21I GWGCWC 2 cut(s) 1098, 1538
Alw26I GTCTC 1 cut(s) 1069
AlwI GGATC 6 cut(s) 215, 729, 1295, 1385, 1637, 1650
AoxI GGCC 5 cut(s) 6, 211, 459, 943, 1451
ApeKI GCWGC 4 cut(s) 58, 668, 1205, 1374
ApoI RAATTY 7 cut(s) 359, 745, 816, 828, 1053, 1292, 1607
ArsI GACNNNNNNTTYG 2 cut(s) 1172, 1204
Asp700I GAANNNNTTC 2 cut(s) 746, 820
AspLEI GCGC 4 cut(s) 1063, 1290, 1532, 1704
AspS9I GGNCC 6 cut(s) 211, 944, 1271, 1452, 1686, 1710
AsuC2I CCSGG 1 cut(s) 607
AsuHPI GGTGA 2 cut(s) 331, 751
AsuII TTCGAA 2 cut(s) 357, 824
AsuNHI GCTAGC 3 cut(s) 311, 427, 518
AvaII GGWCC 3 cut(s) 1271, 1686, 1710
BamHI GGATCC 1 cut(s) 1642
BanI GGYRCC 1 cut(s) 1060
BanII GRGCYC 4 cut(s) 93, 300, 1098, 1538
BbsI GAAGAC 2 cut(s) 554, 1218
Bbv12I GWGCWC 2 cut(s) 1098, 1538
BbvI GCAGC 4 cut(s) 45, 655, 1217, 1386
BccI CCATC 5 cut(s) 146, 244, 332, 713, 1153
BciVI GTATCC 3 cut(s) 613, 1306, 1654
BcnI CCSGG 1 cut(s) 607
BcoDI GTCTC 1 cut(s) 1069
BfaI CTAG 9 cut(s) 312, 428, 434, 519, 1139, 1283, 1317, 1505, 1598
BfmI CTRYAG 1 cut(s) 1416
BfoI RGCGCY 2 cut(s) 1064, 1705
BfuAI ACCTGC 1 cut(s) 497
BfuI GTATCC 3 cut(s) 613, 1306, 1654
Bme1390I CCNGG 1 cut(s) 607
Bme18I GGWCC 3 cut(s) 1271, 1686, 1710
BmeRI GACNNNNNGTC 1 cut(s) 1237
BmgT120I GGNCC 6 cut(s) 211, 944, 1271, 1452, 1686, 1710
BmiI GGNNCC 6 cut(s) 297, 933, 1062, 1272, 1273, 1644
BmrFI CCNGG 1 cut(s) 607
BmrI ACTGGG 1 cut(s) 1485
BmsI GCATC 3 cut(s) 298, 1028, 1345
BmtI GCTAGC 3 cut(s) 315, 431, 522
BmuI ACTGGG 1 cut(s) 1485
BpiI GAAGAC 2 cut(s) 554, 1218
BpmI CTGGAG 1 cut(s) 441
Bpu10I CCTNAGC 1 cut(s) 1305
Bpu14I TTCGAA 2 cut(s) 357, 824
BpuMI CCSGG 1 cut(s) 607
Bsa29I ATCGAT 1 cut(s) 643
BsaAI YACGTR 1 cut(s) 1133
BsaHI GRCGYC 1 cut(s) 1061
BsaJI CCNNGG 2 cut(s) 224, 968
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 225, 468, 733, 941
Bse1I ACTGG 1 cut(s) 1480
Bse3DI GCAATG 2 cut(s) 803, 1035
BseCI ATCGAT 1 cut(s) 643
BseDI CCNNGG 2 cut(s) 224, 968
BseGI GGATG 4 cut(s) 1043, 1164, 1360, 1609
BseLI CCNNNNNNNGG 5 cut(s) 15, 225, 468, 733, 941
BseMI GCAATG 2 cut(s) 803, 1035
BseMII CTCAG 4 cut(s) 992, 1091, 1296, 1373
BseNI ACTGG 1 cut(s) 1480
BseRI GAGGAG 1 cut(s) 58
BseXI GCAGC 4 cut(s) 45, 655, 1217, 1386
BseYI CCCAGC 1 cut(s) 1266
Bsh1236I CGCG 2 cut(s) 38, 1532
BshFI GGCC 5 cut(s) 8, 213, 461, 945, 1453
BshNI GGYRCC 1 cut(s) 1060
BshVI ATCGAT 1 cut(s) 643
BsiHKAI GWGCWC 2 cut(s) 1098, 1538
BsiSI CCGG 3 cut(s) 25, 462, 606
BslFI GGGAC 4 cut(s) 421, 1158, 1284, 1321
BslI CCNNNNNNNGG 5 cut(s) 15, 225, 468, 733, 941
BsmAI GTCTC 1 cut(s) 1069
BsmFI GGGAC 4 cut(s) 421, 1158, 1284, 1321
BsmI GAATGC 3 cut(s) 110, 1013, 1041
BsnI GGCC 5 cut(s) 8, 213, 461, 945, 1453
Bsp119I TTCGAA 2 cut(s) 357, 824
Bsp1286I GDGCHC 4 cut(s) 93, 300, 1098, 1538
Bsp143I GATC 5 cut(s) 220, 721, 1300, 1390, 1642
BspANI GGCC 5 cut(s) 8, 213, 461, 945, 1453
BspCNI CTCAG 4 cut(s) 993, 1092, 1297, 1372
BspDI ATCGAT 1 cut(s) 643
BspFNI CGCG 2 cut(s) 38, 1532
BspHI TCATGA 1 cut(s) 1198
BspLI GGNNCC 6 cut(s) 297, 933, 1062, 1272, 1273, 1644
BspMI ACCTGC 1 cut(s) 497
BspOI GCTAGC 3 cut(s) 315, 431, 522
BspPI GGATC 6 cut(s) 215, 729, 1295, 1385, 1637, 1650
BspT104I TTCGAA 2 cut(s) 357, 824
BspT107I GGYRCC 1 cut(s) 1060
BsrBI CCGCTC 1 cut(s) 216
BsrDI GCAATG 2 cut(s) 803, 1035
BsrI ACTGG 1 cut(s) 1480
BssECI CCNNGG 2 cut(s) 224, 968
BssMI GATC 5 cut(s) 220, 721, 1300, 1390, 1642
BssNI GRCGYC 1 cut(s) 1061
BssT1I CCWWGG 1 cut(s) 968
Bst4CI ACNGT 5 cut(s) 32, 201, 343, 590, 1010
BstACI GRCGYC 1 cut(s) 1061
BstBAI YACGTR 1 cut(s) 1133
BstBI TTCGAA 2 cut(s) 357, 824
BstC8I GCNNGC 6 cut(s) 264, 313, 429, 520, 1534, 1706
BstDEI CTNAG 6 cut(s) 1001, 1100, 1305, 1340, 1359, 1619
BstF5I GGATG 4 cut(s) 1043, 1164, 1360, 1609
BstFNI CGCG 2 cut(s) 38, 1532
BstH2I RGCGCY 2 cut(s) 1064, 1705
BstHHI GCGC 4 cut(s) 1063, 1290, 1532, 1704
BstKTI GATC 5 cut(s) 223, 724, 1303, 1393, 1645
BstMAI GTCTC 1 cut(s) 1069
BstMBI GATC 5 cut(s) 220, 721, 1300, 1390, 1642
BstMWI GCNNNNNNNGC 7 cut(s) 105, 239, 449, 458, 1380, 1383, 1386
BstNSI RCATGY 1 cut(s) 259
BstSCI CCNGG 1 cut(s) 605
BstSFI CTRYAG 1 cut(s) 1416
BstUI CGCG 2 cut(s) 38, 1532
BstV1I GCAGC 4 cut(s) 45, 655, 1217, 1386
BstV2I GAAGAC 2 cut(s) 554, 1218
BstX2I RGATCY 3 cut(s) 721, 1300, 1642
BstYI RGATCY 3 cut(s) 721, 1300, 1642
Bsu15I ATCGAT 1 cut(s) 643
BsuI GTATCC 3 cut(s) 613, 1306, 1654
BsuRI GGCC 5 cut(s) 8, 213, 461, 945, 1453
BsuTUI ATCGAT 1 cut(s) 643
BtgZI GCGATG 2 cut(s) 126, 1545
BtsCI GGATG 4 cut(s) 1043, 1164, 1360, 1609
BtsI GCAGTG 1 cut(s) 275
BtsIMutI CAGTG 3 cut(s) 275, 1006, 1473
BveI ACCTGC 1 cut(s) 497
Cac8I GCNNGC 6 cut(s) 264, 313, 429, 520, 1534, 1706
CciI TCATGA 1 cut(s) 1198
CfoI GCGC 4 cut(s) 1063, 1290, 1532, 1704
Cfr13I GGNCC 6 cut(s) 211, 944, 1271, 1452, 1686, 1710
ClaI ATCGAT 1 cut(s) 643
Csp6I GTAC 5 cut(s) 76, 612, 808, 1110, 1243
CviAII CATG 7 cut(s) 256, 941, 1018, 1024, 1034, 1199, 1449
CviQI GTAC 5 cut(s) 76, 612, 808, 1110, 1243
DdeI CTNAG 6 cut(s) 1001, 1100, 1305, 1340, 1359, 1619
DinI GGCGCC 1 cut(s) 1062
DpnI GATC 5 cut(s) 222, 723, 1302, 1392, 1644
DpnII GATC 5 cut(s) 220, 721, 1300, 1390, 1642
DriI GACNNNNNGTC 1 cut(s) 1237
EaeI YGGCCR 2 cut(s) 6, 459
Eam1105I GACNNNNNGTC 1 cut(s) 1237
Ecl136II GAGCTC 2 cut(s) 1096, 1536
Eco130I CCWWGG 1 cut(s) 968
Eco24I GRGCYC 4 cut(s) 93, 300, 1098, 1538
Eco32I GATATC 2 cut(s) 791, 1413
Eco47I GGWCC 3 cut(s) 1271, 1686, 1710
Eco53kI GAGCTC 2 cut(s) 1096, 1536
Eco57I CTGAAG 1 cut(s) 1134
EcoICRI GAGCTC 2 cut(s) 1096, 1536
EcoO109I RGGNCCY 1 cut(s) 1271
EcoRI GAATTC 2 cut(s) 359, 816
EcoRV GATATC 2 cut(s) 791, 1413
EcoT14I CCWWGG 1 cut(s) 968
EcoT22I ATGCAT 3 cut(s) 698, 1035, 1043
EcoT38I GRGCYC 4 cut(s) 93, 300, 1098, 1538
EgeI GGCGCC 1 cut(s) 1062
EheI GGCGCC 1 cut(s) 1062
ErhI CCWWGG 1 cut(s) 968
FaeI CATG 7 cut(s) 259, 944, 1021, 1027, 1037, 1202, 1452
FalI AAGNNNNNCTT 2 cut(s) 1170, 1202
FaqI GGGAC 4 cut(s) 421, 1158, 1284, 1321
FatI CATG 7 cut(s) 255, 940, 1017, 1023, 1033, 1198, 1448
FauI CCCGC 1 cut(s) 1670
FauNDI CATATG 1 cut(s) 692
FokI GGATG 4 cut(s) 1050, 1171, 1367, 1616
FriOI GRGCYC 4 cut(s) 93, 300, 1098, 1538
FspBI CTAG 9 cut(s) 312, 428, 434, 519, 1139, 1283, 1317, 1505, 1598
GlaI GCGC 4 cut(s) 1062, 1289, 1531, 1703
GsaI CCCAGC 1 cut(s) 1270
GsuI CTGGAG 1 cut(s) 441
HaeII RGCGCY 2 cut(s) 1064, 1705
HaeIII GGCC 5 cut(s) 8, 213, 461, 945, 1453
HapII CCGG 3 cut(s) 25, 462, 606
HhaI GCGC 4 cut(s) 1063, 1290, 1532, 1704
Hin1I GRCGYC 1 cut(s) 1061
Hin1II CATG 7 cut(s) 259, 944, 1021, 1027, 1037, 1202, 1452
Hin6I GCGC 4 cut(s) 1061, 1288, 1530, 1702
HinP1I GCGC 4 cut(s) 1061, 1288, 1530, 1702
HincII GTYRAC 2 cut(s) 163, 582
HindII GTYRAC 2 cut(s) 163, 582
HindIII AAGCTT 3 cut(s) 231, 530, 843
HinfI GANTC 5 cut(s) 334, 1334, 1346, 1480, 1511
HpaII CCGG 3 cut(s) 25, 462, 606
HphI GGTGA 2 cut(s) 331, 751
Hpy166II GTNNAC 2 cut(s) 163, 582
Hpy188III TCNNGA 6 cut(s) 66, 182, 1099, 1199, 1304, 1684
Hpy8I GTNNAC 2 cut(s) 163, 582
Hpy99I CGWCG 2 cut(s) 353, 379
HpyAV CCTTC 6 cut(s) 767, 831, 1109, 1256, 1256, 1404
HpyCH4III ACNGT 5 cut(s) 32, 201, 343, 590, 1010
HpyCH4IV ACGT 3 cut(s) 377, 1132, 1653
HpyF10VI GCNNNNNNNGC 7 cut(s) 105, 239, 449, 458, 1380, 1383, 1386
HpyF3I CTNAG 6 cut(s) 1001, 1100, 1305, 1340, 1359, 1619
HpySE526I ACGT 3 cut(s) 377, 1132, 1653
Hsp92I GRCGYC 1 cut(s) 1061
Hsp92II CATG 7 cut(s) 259, 944, 1021, 1027, 1037, 1202, 1452
HspAI GCGC 4 cut(s) 1061, 1288, 1530, 1702
KasI GGCGCC 1 cut(s) 1060
KflI GGGWCCC 1 cut(s) 1271
Kzo9I GATC 5 cut(s) 220, 721, 1300, 1390, 1642
LmnI GCTCC 7 cut(s) 45, 104, 221, 295, 931, 1101, 1541
Lsp1109I GCAGC 4 cut(s) 45, 655, 1217, 1386
LweI GCATC 3 cut(s) 298, 1028, 1345
MaeI CTAG 9 cut(s) 312, 428, 434, 519, 1139, 1283, 1317, 1505, 1598
MaeII ACGT 3 cut(s) 377, 1132, 1653
MaeIII GTNAC 2 cut(s) 273, 1401
MalI GATC 5 cut(s) 222, 723, 1302, 1392, 1644
MbiI CCGCTC 1 cut(s) 216
MboI GATC 5 cut(s) 220, 721, 1300, 1390, 1642
MboII GAAGA 6 cut(s) 490, 559, 882, 1223, 1310, 1520
MflI RGATCY 3 cut(s) 721, 1300, 1642
MhlI GDGCHC 4 cut(s) 93, 300, 1098, 1538
Mly113I GGCGCC 1 cut(s) 1061
MlyI GAGTC 1 cut(s) 1343
Mph1103I ATGCAT 3 cut(s) 698, 1035, 1043
MroXI GAANNNNTTC 2 cut(s) 746, 820
MseI TTAA 7 cut(s) 195, 393, 783, 1169, 1430, 1442, 1638
MslI CAYNNNNRTG 2 cut(s) 1022, 1028
MspA1I CMGCKG 1 cut(s) 1377
MspI CCGG 3 cut(s) 25, 462, 606
MspR9I CCNGG 1 cut(s) 607
Mva1269I GAATGC 3 cut(s) 110, 1013, 1041
MvnI CGCG 2 cut(s) 38, 1532
MwoI GCNNNNNNNGC 7 cut(s) 105, 239, 449, 458, 1380, 1383, 1386
NarI GGCGCC 1 cut(s) 1061
NciI CCSGG 1 cut(s) 607
NdeI CATATG 1 cut(s) 692
NdeII GATC 5 cut(s) 220, 721, 1300, 1390, 1642
NheI GCTAGC 3 cut(s) 311, 427, 518
NlaIII CATG 7 cut(s) 259, 944, 1021, 1027, 1037, 1202, 1452
NlaIV GGNNCC 6 cut(s) 297, 933, 1062, 1272, 1273, 1644
NmuCI GTSAC 2 cut(s) 273, 1401
NsiI ATGCAT 3 cut(s) 698, 1035, 1043
NspI RCATGY 1 cut(s) 259
NspV TTCGAA 2 cut(s) 357, 824
PagI TCATGA 1 cut(s) 1198
PcsI WCGNNNNNNNCGW 1 cut(s) 354
PctI GAATGC 3 cut(s) 110, 1013, 1041
PdmI GAANNNNTTC 2 cut(s) 746, 820
PfeI GAWTC 4 cut(s) 334, 1346, 1480, 1511
PflMI CCANNNNNTGG 2 cut(s) 733, 941
PfoI TCCNGGA 1 cut(s) 605
PleI GAGTC 1 cut(s) 1342
PluTI GGCGCC 1 cut(s) 1064
PpsI GAGTC 1 cut(s) 1342
Ppu21I YACGTR 1 cut(s) 1133
PpuMI RGGWCCY 1 cut(s) 1271
PsiI TTATAA 1 cut(s) 686
Psp124BI GAGCTC 2 cut(s) 1098, 1538
Psp5II RGGWCCY 1 cut(s) 1271
PspFI CCCAGC 1 cut(s) 1266
PspN4I GGNNCC 6 cut(s) 297, 933, 1062, 1272, 1273, 1644
PspPI GGNCC 6 cut(s) 211, 944, 1271, 1452, 1686, 1710
PspPPI RGGWCCY 1 cut(s) 1271
PsuI RGATCY 3 cut(s) 721, 1300, 1642
RsaI GTAC 5 cut(s) 77, 613, 809, 1111, 1244
RsaNI GTAC 5 cut(s) 76, 612, 808, 1110, 1243
RseI CAYNNNNRTG 2 cut(s) 1022, 1028
SacI GAGCTC 2 cut(s) 1098, 1538
SaqAI TTAA 7 cut(s) 195, 393, 783, 1169, 1430, 1442, 1638
Sau3AI GATC 5 cut(s) 220, 721, 1300, 1390, 1642
Sau96I GGNCC 6 cut(s) 211, 944, 1271, 1452, 1686, 1710
SchI GAGTC 1 cut(s) 1343
ScrFI CCNGG 1 cut(s) 607
SduI GDGCHC 4 cut(s) 93, 300, 1098, 1538
SfaNI GCATC 3 cut(s) 298, 1028, 1345
SfcI CTRYAG 1 cut(s) 1416
SfoI GGCGCC 1 cut(s) 1062
SfuI TTCGAA 2 cut(s) 357, 824
SinI GGWCC 3 cut(s) 1271, 1686, 1710
SmiMI CAYNNNNRTG 2 cut(s) 1022, 1028
SspDI GGCGCC 1 cut(s) 1060
SspI AATATT 2 cut(s) 320, 1366
SspMI CTAG 9 cut(s) 312, 428, 434, 519, 1139, 1283, 1317, 1505, 1598
SstI GAGCTC 2 cut(s) 1098, 1538
StyD4I CCNGG 1 cut(s) 605
StyI CCWWGG 1 cut(s) 968
TaaI ACNGT 5 cut(s) 32, 201, 343, 590, 1010
TaiI ACGT 3 cut(s) 380, 1135, 1656
TaqI TCGA 3 cut(s) 357, 643, 824
TatI WGTACW 1 cut(s) 611
TauI GCSGC 9 cut(s) 8, 111, 132, 216, 245, 1380, 1383, 1386, 1389
TfiI GAWTC 4 cut(s) 334, 1346, 1480, 1511
Tru1I TTAA 7 cut(s) 195, 393, 783, 1169, 1430, 1442, 1638
Tru9I TTAA 7 cut(s) 195, 393, 783, 1169, 1430, 1442, 1638
TscAI CASTG 3 cut(s) 282, 1013, 1480
TseFI GTSAC 2 cut(s) 273, 1401
TseI GCWGC 4 cut(s) 58, 668, 1205, 1374
Tsp45I GTSAC 2 cut(s) 273, 1401
TspGWI ACGGA 1 cut(s) 576
TspRI CASTG 3 cut(s) 282, 1013, 1480
Van91I CCANNNNNTGG 2 cut(s) 733, 941
VpaK11BI GGWCC 3 cut(s) 1271, 1686, 1710
XapI RAATTY 7 cut(s) 359, 745, 816, 828, 1053, 1292, 1607
XceI RCATGY 1 cut(s) 259
XmnI GAANNNNTTC 2 cut(s) 746, 820
XspI CTAG 9 cut(s) 312, 428, 434, 519, 1139, 1283, 1317, 1505, 1598
Zsp2I ATGCAT 3 cut(s) 698, 1035, 1043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.