No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Transposase_24 | PF03004 | 4 - 94 | 4.4e-08 | Plant transposase (Ptta/En/Spm family) |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 58 |
| AcsI | RAATTY | 2 cut(s) | 273, 297 |
| AfaI | GTAC | 1 cut(s) | 440 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 394 |
| AgsI | TTSAA | 5 cut(s) | 117, 278, 392, 426, 484 |
| AluBI | AGCT | 2 cut(s) | 143, 503 |
| AluI | AGCT | 2 cut(s) | 143, 503 |
| Alw21I | GWGCWC | 1 cut(s) | 464 |
| Alw26I | GTCTC | 2 cut(s) | 392, 542 |
| AoxI | GGCC | 2 cut(s) | 119, 385 |
| ApeKI | GCWGC | 2 cut(s) | 143, 413 |
| ApoI | RAATTY | 2 cut(s) | 273, 297 |
| Bbv12I | GWGCWC | 1 cut(s) | 464 |
| BbvI | GCAGC | 2 cut(s) | 130, 400 |
| BccI | CCATC | 1 cut(s) | 469 |
| BcoDI | GTCTC | 2 cut(s) | 392, 542 |
| BfaI | CTAG | 1 cut(s) | 534 |
| BfmI | CTRYAG | 1 cut(s) | 39 |
| BisI | GCNGC | 2 cut(s) | 144, 414 |
| BlsI | GCNGC | 2 cut(s) | 145, 415 |
| BmsI | GCATC | 1 cut(s) | 205 |
| BoxI | GACNNNNGTC | 1 cut(s) | 534 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 394 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 394 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseRI | GAGGAG | 2 cut(s) | 464, 530 |
| BseXI | GCAGC | 2 cut(s) | 130, 400 |
| BshFI | GGCC | 2 cut(s) | 121, 387 |
| BsiHKAI | GWGCWC | 1 cut(s) | 464 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 394 |
| BsmAI | GTCTC | 2 cut(s) | 392, 542 |
| BsnI | GGCC | 2 cut(s) | 121, 387 |
| Bsp1286I | GDGCHC | 1 cut(s) | 464 |
| BspANI | GGCC | 2 cut(s) | 121, 387 |
| BspCNI | CTCAG | 1 cut(s) | 67 |
| BspHI | TCATGA | 1 cut(s) | 351 |
| BstDEI | CTNAG | 2 cut(s) | 75, 504 |
| BstMAI | GTCTC | 2 cut(s) | 392, 542 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 534 |
| BstSFI | CTRYAG | 1 cut(s) | 39 |
| BstV1I | GCAGC | 2 cut(s) | 130, 400 |
| BsuRI | GGCC | 2 cut(s) | 121, 387 |
| CciI | TCATGA | 1 cut(s) | 351 |
| Csp6I | GTAC | 1 cut(s) | 439 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 88, 123 |
| CviAII | CATG | 4 cut(s) | 193, 222, 352, 549 |
| CviJI | RGCY | 6 cut(s) | 121, 143, 213, 269, 387, 503 |
| CviKI_1 | RGCY | 6 cut(s) | 121, 143, 213, 269, 387, 503 |
| CviQI | GTAC | 1 cut(s) | 439 |
| DdeI | CTNAG | 2 cut(s) | 75, 504 |
| EcoT22I | ATGCAT | 1 cut(s) | 198 |
| FaeI | CATG | 4 cut(s) | 196, 225, 355, 552 |
| FatI | CATG | 4 cut(s) | 192, 221, 351, 548 |
| FauNDI | CATATG | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 2 cut(s) | 144, 414 |
| Fsp4HI | GCNGC | 2 cut(s) | 144, 414 |
| FspBI | CTAG | 1 cut(s) | 534 |
| GluI | GCNGC | 2 cut(s) | 144, 414 |
| HaeIII | GGCC | 2 cut(s) | 121, 387 |
| Hin1II | CATG | 4 cut(s) | 196, 225, 355, 552 |
| HincII | GTYRAC | 2 cut(s) | 229, 288 |
| HindII | GTYRAC | 2 cut(s) | 229, 288 |
| HinfI | GANTC | 2 cut(s) | 348, 530 |
| HpaI | GTTAAC | 1 cut(s) | 229 |
| Hpy166II | GTNNAC | 4 cut(s) | 36, 229, 288, 441 |
| Hpy188I | TCNGA | 1 cut(s) | 54 |
| Hpy188III | TCNNGA | 1 cut(s) | 352 |
| Hpy8I | GTNNAC | 4 cut(s) | 36, 229, 288, 441 |
| HpyAV | CCTTC | 4 cut(s) | 148, 349, 398, 530 |
| HpyCH4IV | ACGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 4 cut(s) | 63, 146, 196, 221 |
| HpyF3I | CTNAG | 2 cut(s) | 75, 504 |
| HpySE526I | ACGT | 1 cut(s) | 58 |
| Hsp92II | CATG | 4 cut(s) | 196, 225, 355, 552 |
| KspAI | GTTAAC | 1 cut(s) | 229 |
| LpnPI | CCDG | 1 cut(s) | 529 |
| Lsp1109I | GCAGC | 2 cut(s) | 130, 400 |
| LweI | GCATC | 1 cut(s) | 205 |
| MaeI | CTAG | 1 cut(s) | 534 |
| MaeII | ACGT | 1 cut(s) | 58 |
| MaeIII | GTNAC | 1 cut(s) | 86 |
| MboII | GAAGA | 4 cut(s) | 414, 484, 496, 503 |
| MfeI | CAATTG | 2 cut(s) | 171, 320 |
| MhlI | GDGCHC | 1 cut(s) | 464 |
| MluCI | AATT | 9 cut(s) | 171, 181, 263, 273, 297, 320, 418, 494, 515 |
| MlyI | GAGTC | 2 cut(s) | 357, 524 |
| MmeI | TCCRAC | 1 cut(s) | 325 |
| MnlI | CCTC | 5 cut(s) | 37, 318, 442, 521, 551 |
| Mph1103I | ATGCAT | 1 cut(s) | 198 |
| MseI | TTAA | 2 cut(s) | 92, 228 |
| MslI | CAYNNNNRTG | 1 cut(s) | 207 |
| MunI | CAATTG | 2 cut(s) | 171, 320 |
| NdeI | CATATG | 1 cut(s) | 135 |
| NlaIII | CATG | 4 cut(s) | 196, 225, 355, 552 |
| NsiI | ATGCAT | 1 cut(s) | 198 |
| PagI | TCATGA | 1 cut(s) | 351 |
| PkrI | GCNGC | 2 cut(s) | 145, 415 |
| PleI | GAGTC | 2 cut(s) | 356, 524 |
| PpsI | GAGTC | 2 cut(s) | 356, 524 |
| PshAI | GACNNNNGTC | 1 cut(s) | 534 |
| Psp1406I | AACGTT | 1 cut(s) | 58 |
| RsaI | GTAC | 1 cut(s) | 440 |
| RsaNI | GTAC | 1 cut(s) | 439 |
| RseI | CAYNNNNRTG | 1 cut(s) | 207 |
| SaqAI | TTAA | 2 cut(s) | 92, 228 |
| SatI | GCNGC | 2 cut(s) | 144, 414 |
| SchI | GAGTC | 2 cut(s) | 357, 524 |
| SduI | GDGCHC | 1 cut(s) | 464 |
| SetI | ASST | 4 cut(s) | 61, 145, 211, 505 |
| SfaNI | GCATC | 1 cut(s) | 205 |
| SfcI | CTRYAG | 1 cut(s) | 39 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 207 |
| Sse9I | AATT | 9 cut(s) | 171, 181, 263, 273, 297, 320, 418, 494, 515 |
| SspMI | CTAG | 1 cut(s) | 534 |
| TaiI | ACGT | 1 cut(s) | 61 |
| TasI | AATT | 9 cut(s) | 171, 181, 263, 273, 297, 320, 418, 494, 515 |
| TatI | WGTACW | 1 cut(s) | 438 |
| Tru1I | TTAA | 2 cut(s) | 92, 228 |
| Tru9I | TTAA | 2 cut(s) | 92, 228 |
| TseI | GCWGC | 2 cut(s) | 143, 413 |
| TspDTI | ATGAA | 2 cut(s) | 249, 368 |
| XapI | RAATTY | 2 cut(s) | 273, 297 |
| XspI | CTAG | 1 cut(s) | 534 |
| Zsp2I | ATGCAT | 1 cut(s) | 198 |