Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000202

Physical Location & Seq

Genomic Coordinates Forward (+)

22552267 .. 22571419

Gene Structure 19153 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g29230.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGGCATCGGAGGTTGCCAGATTTCTCCGGCAAAGTTTCCTAGACTCTCTGGCGGAGGCAGAGTCTGAATTGTCAGGTTCGGCTTTATTCTCTTACTTCACAGCTATAAAAGATGTATTGAAACATAAAGACATTATGATCCAACCTGATCGTTACTCTGTAACTACAAGTCTGCTCCACGAACTCAACGACGCTTTGTCGGAGTACCGAATCTTTGAGCTTGAATGCAAGCAGCTCAACAAGAAGCTTCTACTCTTCAACCCTTTCACATATTATTTCATCCAAAAGATGAAGAAGCAGCTCAAGGACATAAAACATAAACTTGCAAGTGTGGCGGCGGCGCCGGAACGAATTGGCAATAGATTTGATCAGCAGAAGAAGTCGCAGTCCATACTTCCGCCGAACGTTTTCGGGTTTGATGAGCAGGCAGAACATATAGAGGGTTTGCTCTTCAATGGGGGACTTAGCCGTGCTAGATTTACTTCAATTGGTGTAGTGGGTATTGCTGGAGTGGGTAAGACCACATTGGTGCAAAAGGTTTTGGAGAGGAAGACAGTGATAGATGGGTTTAAGTCTATATTTTGGTTAAGCTTTTCAGGGATGAAGGAAGAGCAAAAACAGTACAGTAGGTCCAGCATTGAGACATGCATTGTTGATAAATTGGGGAAAATCGTAGAGGGGAAGATAGTTGGCCTTGGGGAGCTCTTGGAAAAGCTCAACCAACATTTATCGGGTGCGAGGTATTTGCTTGTGTTGGATGATATGTGGGGTCAGCATATCAACATTGGGAAGCGCTTGCAGCGCGGATTGCCTAAGGGTAGTGGTGGTGCGGTCATCTTCACTACCAGGTTGAATGAAGTGGCTGAAAAGCTGGTGGAGCAGGATAAGGTGATTCATGTCAAGCCTTTGGACGGAGAAAGTTGTTGGAGTATATTTCAGGAGACTATGAGGAATAATGAGGAAAATTTGTACAGTTCACAAGTTGAAACATTGAATAAGATTGAGGGTGAAATTAAGGATCAATGTCATGGTCTACCATTGGTTGCTAAGGCACTCGCAAAAATCATTCCGGAACAGATCCGTGAGATTGAGTCCGAGCGCTTCTTGAAGGATTTGTACATACCTGATGAACTTCTTAGAACTGATTTAGATGCTGAACCTGCTGTTTATATACCAAAGTTCCCAGTGTTAGTGTTTGTTGATATGGAAAATGAACAGCTTGGAACAAGACTCTTCAATGAATTCAGCTACCATCTAAATAAACGGCAGGTATTTGCTGTGCTGGCTGATAATTATGATTCCAAGCAAAGAGGACAAGAAGATAATCCTGAGGCGGTGCTAAGGGGGGTTTATGCTACCCTTGAAAAGCTTAAGGAAATAAAGTATAGTTTTGCTTCCAAAATTAAAAAGGAGATTAGAGTTATTATTGTTGGTGGGGATGCTGTGGTAAATCGGATTTTGGGAGTTATCTGTGATCTAAAACTACCAGAGGCACCCTCCATTGTTCCAATACCACAGGGAGCTGAAAATGACATCCCAGTTGCTGAGAATGACATTGCAGTTACGTTTGGATGGAAGGCGTTGAAGGCTGACCGTCAATCAGTGAAAACATTTCTGATTAAAGACGTAACAGTTGCAGAAAAGATGAAACTAGATAGCTGGCATATTCTCATTAAGATGAAATCCACTACAAGTTCTACAGATCAGCAAGAAATACCACCTTTATATGTTATGCAAACCATGGATGATCTCACATTGTGCGGAGGAGTTTGGAACTACTTTAGCTTGGGAGTTGATGCTCCAAGATTGTATGCACCTTACTGCTGTCATCCTAACGCAAGGACTTTAAACTCGCTTGTGAAGGTATCGATTATGGAAAATGGCTCGTGGAAATTACTTAACATCCCGAGTAGAATCAAGTCAATTGTCTGTCTTAACTTGCCTATCTATCTTGGCGAAGCACGAACACCAAAGATGAAGAAAGATAAAAAAAGACCCCTGAAGACATCCTCCATCGATGATGCGCAACTTGAAATTTTTGGCCTGGCAGATGTTTTGCTTGCTCAGAATGAACAAATTCCCCTTGGCCAGGGCCAGGTACGGGAAATTCGCTTCGAGTTTATTAAGGATGCAGCAGAATCTGTAAACATAAGGATTGATGGATCACCATGGAATAAAATTCCACTTGACAGTATCATTGAGATTGGAATGTCTCACAACGGTCAAGTCAACATTCTTGCCAATGGGGTTTGCCCTGCAAAAGGAAGTAACCATCACTCCTCACAGCCCTGTGCTTCTCAAGTTGAAGATGATAATGCACCCTGTGCTTCCAAAACTGACGACGATACAAATGCTGAAGATAACCGTGAAGCATATAAGAAGTTTACCACAACAAGGACATTCAAAATCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004143 GO:0004672 GO:0005488 GO:0005524 GO:0005575 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007205 GO:0008144 GO:0008150 GO:0008152 GO:0008289 GO:0009653 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0019992 GO:0023052 GO:0030554 GO:0032101 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0040012 GO:0043167 GO:0043168 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0048583 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0050920 GO:0050926 GO:0051716 GO:0065007 GO:0071704 GO:0097159 GO:0097367 GO:0140096 GO:1901265 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04070 ko04072 ko05231 map00561 map00564 map01100 map01110 map04070 map04072 map05231

Pfam Domains

Protein Families

C1_1 DAGK_acc DAGK_cat NB-ARC

Protein Analysis

805

Amino Acids

90.39

Weight (kDa)

6.58

Isoelectric Point (pI)

41.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	159 - 319	3.2e-26	NB-ARC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G28130
fragaria_vesca	FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica	MD17G1216600.v1.1
prunus_persica	Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis	pycom17g22110
rosa_chinensis	RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata	RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora	Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa	Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha	Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana	Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2025
Acc36I	ACCTGC	2 cut(s)	1168, 1258
AccB1I	GGYRCC	2 cut(s)	340, 1492
AccI	GTMKAC	1 cut(s)	1033
AccII	CGCG	1 cut(s)	804
AccIII	TCCGGA	1 cut(s)	1069
AciI	CCGC	8 cut(s)	53, 335, 338, 398, 804, 830, 1334, 1761
AclI	AACGTT	1 cut(s)	405
AclWI	GGATC	4 cut(s)	133, 1026, 1072, 2170
AcoI	YGGCCR	1 cut(s)	2086
AcsI	RAATTY	6 cut(s)	964, 1241, 2034, 2076, 2106, 2178
AcuI	CTGAAG	2 cut(s)	2021, 2376
AcyI	GRCGYC	1 cut(s)	341
AdeI	CACNNNGTG	2 cut(s)	1758, 2324
AfaI	GTAC	5 cut(s)	206, 623, 971, 1118, 2100
AfeI	AGCGCT	2 cut(s)	794, 1100
AfiI	CCNNNNNNNGG	6 cut(s)	911, 2089, 2095, 2101, 2261, 2394
AflII	CTTAAG	1 cut(s)	1370
AhdI	GACNNNNNGTC	1 cut(s)	196
AjnI	CCWGG	4 cut(s)	845, 2043, 2088, 2094
AleI	CACNNNNGTG	1 cut(s)	527
Alw21I	GWGCWC	1 cut(s)	705
Alw26I	GTCTC	3 cut(s)	635, 935, 2217
AlwI	GGATC	4 cut(s)	133, 1026, 1072, 2170
AlwNI	CAGNNNCTG	3 cut(s)	65, 1544, 2141
Ama87I	CYCGRG	1 cut(s)	1906
Aor13HI	TCCGGA	1 cut(s)	1069
Aor51HI	AGCGCT	2 cut(s)	794, 1100
AoxI	GGCC	4 cut(s)	691, 2041, 2086, 2092
ApeKI	GCWGC	4 cut(s)	232, 298, 799, 2132
ApoI	RAATTY	6 cut(s)	964, 1241, 2034, 2076, 2106, 2178
Asp700I	GAANNNNTTC	2 cut(s)	407, 2076
AspLEI	GCGC	5 cut(s)	343, 795, 804, 1101, 2026
AspS9I	GGNCC	2 cut(s)	630, 2092
AsuHPI	GGTGA	3 cut(s)	901, 1019, 2157
AvaI	CYCGRG	1 cut(s)	1906
AvaII	GGWCC	1 cut(s)	630
AxyI	CCTNAGG	2 cut(s)	813, 1329
BalI	TGGCCA	1 cut(s)	2088
BanI	GGYRCC	2 cut(s)	340, 1492
BanII	GRGCYC	1 cut(s)	705
BarI	GAAGNNNNNNTAC	2 cut(s)	1100, 1132
BauI	CACGAG	1 cut(s)	1885
BbsI	GAAGAC	2 cut(s)	557, 2009
Bbv12I	GWGCWC	1 cut(s)	705
BbvI	GCAGC	4 cut(s)	244, 310, 811, 2144
BccI	CCATC	6 cut(s)	557, 1260, 1566, 2021, 2153, 2280
BceAI	ACGGC	2 cut(s)	453, 1280
BcgI	CGANNNNNNTGC	4 cut(s)	727, 761, 2333, 2367
BciT130I	CCWGG	4 cut(s)	847, 2045, 2090, 2096
BclI	TGATCA	1 cut(s)	367
BcoDI	GTCTC	3 cut(s)	635, 935, 2217
BfaI	CTAG	3 cut(s)	41, 474, 1652
BfmI	CTRYAG	1 cut(s)	1698
BfoI	RGCGCY	3 cut(s)	344, 796, 1102
BfrI	CTTAAG	1 cut(s)	1370
BfuAI	ACCTGC	2 cut(s)	1168, 1258
BisI	GCNGC	6 cut(s)	233, 299, 336, 339, 800, 2133
BlsI	GCNGC	6 cut(s)	234, 300, 337, 340, 801, 2134
Bme1390I	CCNGG	4 cut(s)	847, 2045, 2090, 2096
Bme18I	GGWCC	1 cut(s)	630
BmeRI	GACNNNNNGTC	1 cut(s)	196
BmeT110I	CYCGRG	1 cut(s)	1906
BmgT120I	GGNCC	2 cut(s)	630, 2092
BmiI	GGNNCC	2 cut(s)	342, 1494
BmrFI	CCNGG	4 cut(s)	847, 2045, 2090, 2096
BmrI	ACTGGG	2 cut(s)	1178, 1532
BmsI	GCATC	6 cut(s)	14, 1141, 1429, 1786, 2011, 2119
BmuI	ACTGGG	2 cut(s)	1178, 1532
BpiI	GAAGAC	2 cut(s)	557, 2009
BplI	GAGNNNNNCTC	2 cut(s)	1481, 1513
BpmI	CTGGAG	1 cut(s)	528
Bpu10I	CCTNAGC	2 cut(s)	1047, 1340
BpuEI	CTTGAG	2 cut(s)	287, 2283
Bsa29I	ATCGAT	2 cut(s)	1868, 2016
BsaHI	GRCGYC	1 cut(s)	341
BsaJI	CCNNGG	5 cut(s)	694, 1740, 2083, 2089, 2168
BsaWI	WCCGGW	1 cut(s)	1069
BsaXI	ACNNNNNCTCC	4 cut(s)	47, 77, 2261, 2291
Bsc4I	CCNNNNNNNGG	6 cut(s)	911, 2089, 2095, 2101, 2261, 2394
Bse1I	ACTGG	2 cut(s)	1184, 1538
Bse21I	CCTNAGG	2 cut(s)	813, 1329
Bse3DI	GCAATG	1 cut(s)	1554
BseAI	TCCGGA	1 cut(s)	1069
BseBI	CCWGG	4 cut(s)	847, 2045, 2090, 2096
BseCI	ATCGAT	2 cut(s)	1868, 2016
BseDI	CCNNGG	5 cut(s)	694, 1740, 2083, 2089, 2168
BseLI	CCNNNNNNNGG	6 cut(s)	911, 2089, 2095, 2101, 2261, 2394
BseMI	GCAATG	1 cut(s)	1554
BseMII	CTCAG	3 cut(s)	1320, 1536, 2078
BseNI	ACTGG	2 cut(s)	1184, 1538
BseRI	GAGGAG	2 cut(s)	1779, 2269
BseXI	GCAGC	4 cut(s)	244, 310, 811, 2144
Bsh1236I	CGCG	1 cut(s)	804
BshFI	GGCC	4 cut(s)	693, 2043, 2088, 2094
BshNI	GGYRCC	2 cut(s)	340, 1492
BshVI	ATCGAT	2 cut(s)	1868, 2016
BsiHKAI	GWGCWC	1 cut(s)	705
BsiHKCI	CYCGRG	1 cut(s)	1906
BsiSI	CCGG	3 cut(s)	28, 344, 1070
BslFI	GGGAC	1 cut(s)	474
BslI	CCNNNNNNNGG	6 cut(s)	911, 2089, 2095, 2101, 2261, 2394
BsmAI	GTCTC	3 cut(s)	635, 935, 2217
BsmFI	GGGAC	1 cut(s)	474
BsmI	GAATGC	1 cut(s)	230
BsnI	GGCC	4 cut(s)	693, 2043, 2088, 2094
BsoBI	CYCGRG	1 cut(s)	1906
Bsp1286I	GDGCHC	1 cut(s)	705
Bsp13I	TCCGGA	1 cut(s)	1069
Bsp1407I	TGTACA	2 cut(s)	969, 1116
Bsp143I	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
Bsp19I	CCATGG	2 cut(s)	1740, 2168
BspACI	CCGC	8 cut(s)	53, 335, 338, 398, 804, 830, 1334, 1761
BspANI	GGCC	4 cut(s)	693, 2043, 2088, 2094
BspCNI	CTCAG	3 cut(s)	1321, 1537, 2077
BspDI	ATCGAT	2 cut(s)	1868, 2016
BspEI	TCCGGA	1 cut(s)	1069
BspFNI	CGCG	1 cut(s)	804
BspLI	GGNNCC	2 cut(s)	342, 1494
BspMI	ACCTGC	2 cut(s)	1168, 1258
BspPI	GGATC	4 cut(s)	133, 1026, 1072, 2170
BspQI	GCTCTTC	2 cut(s)	455, 603
BspT107I	GGYRCC	2 cut(s)	340, 1492
BspTI	CTTAAG	1 cut(s)	1370
BsrDI	GCAATG	1 cut(s)	1554
BsrGI	TGTACA	2 cut(s)	969, 1116
BsrI	ACTGG	2 cut(s)	1184, 1538
BssECI	CCNNGG	5 cut(s)	694, 1740, 2083, 2089, 2168
BssMI	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
BssNI	GRCGYC	1 cut(s)	341
BssSI	CACGAG	1 cut(s)	1885
BssT1I	CCWWGG	4 cut(s)	694, 1740, 2083, 2168
Bst2BI	CACGAG	1 cut(s)	1885
Bst2UI	CCWGG	4 cut(s)	847, 2045, 2090, 2096
Bst4CI	ACNGT	9 cut(s)	556, 621, 626, 974, 1595, 1633, 2192, 2222, 2366
Bst6I	CTCTTC	4 cut(s)	260, 455, 603, 1238
BstACI	GRCGYC	1 cut(s)	341
BstAFI	CTTAAG	1 cut(s)	1370
BstAPI	GCANNNNNTGC	1 cut(s)	2324
BstAUI	TGTACA	2 cut(s)	969, 1116
BstC8I	GCNNGC	6 cut(s)	230, 426, 797, 1284, 1661, 2061
BstDEI	CTNAG	8 cut(s)	464, 813, 1047, 1136, 1329, 1340, 1545, 2064
BstDSI	CCRYGG	2 cut(s)	1740, 2168
BstENI	CCTNNNNNAGG	2 cut(s)	2087, 2259
BstFNI	CGCG	1 cut(s)	804
BstH2I	RGCGCY	3 cut(s)	344, 796, 1102
BstHHI	GCGC	5 cut(s)	343, 795, 804, 1101, 2026
BstKTI	GATC	9 cut(s)	141, 151, 370, 1021, 1080, 1477, 1705, 1750, 2165
BstMAI	GTCTC	3 cut(s)	635, 935, 2217
BstMBI	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
BstMWI	GCNNNNNNNGC	9 cut(s)	332, 799, 801, 808, 877, 1160, 1283, 1586, 2324
BstNI	CCWGG	4 cut(s)	847, 2045, 2090, 2096
BstNSI	RCATGY	1 cut(s)	648
BstSCI	CCNGG	4 cut(s)	845, 2043, 2088, 2094
BstSFI	CTRYAG	1 cut(s)	1698
BstUI	CGCG	1 cut(s)	804
BstV1I	GCAGC	4 cut(s)	244, 310, 811, 2144
BstV2I	GAAGAC	2 cut(s)	557, 2009
BstX2I	RGATCY	1 cut(s)	1077
BstYI	RGATCY	1 cut(s)	1077
Bsu15I	ATCGAT	2 cut(s)	1868, 2016
Bsu36I	CCTNAGG	2 cut(s)	813, 1329
BsuRI	GGCC	4 cut(s)	693, 2043, 2088, 2094
BsuTUI	ATCGAT	2 cut(s)	1868, 2016
BtgI	CCRYGG	2 cut(s)	1740, 2168
BtsIMutI	CAGTG	3 cut(s)	561, 1191, 1608
BveI	ACCTGC	2 cut(s)	1168, 1258
Cac8I	GCNNGC	6 cut(s)	230, 426, 797, 1284, 1661, 2061
CaiI	CAGNNNCTG	3 cut(s)	65, 1544, 2141
CfoI	GCGC	5 cut(s)	343, 795, 804, 1101, 2026
Cfr13I	GGNCC	2 cut(s)	630, 2092
ClaI	ATCGAT	2 cut(s)	1868, 2016
CseI	GACGC	1 cut(s)	200
CsiI	ACCWGGT	1 cut(s)	845
Csp6I	GTAC	5 cut(s)	205, 622, 970, 1117, 2099
CviAII	CATG	5 cut(s)	645, 896, 1028, 1741, 2169
CviQI	GTAC	5 cut(s)	205, 622, 970, 1117, 2099
DdeI	CTNAG	8 cut(s)	464, 813, 1047, 1136, 1329, 1340, 1545, 2064
DinI	GGCGCC	1 cut(s)	342
DpnI	GATC	9 cut(s)	140, 150, 369, 1020, 1079, 1476, 1704, 1749, 2164
DpnII	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
DraI	TTTAAA	1 cut(s)	1848
DraIII	CACNNNGTG	2 cut(s)	1758, 2324
DriI	GACNNNNNGTC	1 cut(s)	196
EaeI	YGGCCR	1 cut(s)	2086
Eam1104I	CTCTTC	4 cut(s)	260, 455, 603, 1238
Eam1105I	GACNNNNNGTC	1 cut(s)	196
EarI	CTCTTC	4 cut(s)	260, 455, 603, 1238
EciI	GGCGGA	2 cut(s)	68, 387
Ecl136II	GAGCTC	1 cut(s)	703
Eco130I	CCWWGG	4 cut(s)	694, 1740, 2083, 2168
Eco24I	GRGCYC	1 cut(s)	705
Eco47I	GGWCC	1 cut(s)	630
Eco47III	AGCGCT	2 cut(s)	794, 1100
Eco53kI	GAGCTC	1 cut(s)	703
Eco57I	CTGAAG	2 cut(s)	2021, 2376
Eco81I	CCTNAGG	2 cut(s)	813, 1329
Eco88I	CYCGRG	1 cut(s)	1906
EcoICRI	GAGCTC	1 cut(s)	703
EcoNI	CCTNNNNNAGG	2 cut(s)	2087, 2259
EcoRI	GAATTC	1 cut(s)	1241
EcoRII	CCWGG	4 cut(s)	845, 2043, 2088, 2094
EcoT14I	CCWWGG	4 cut(s)	694, 1740, 2083, 2168
EcoT22I	ATGCAT	1 cut(s)	650
EcoT38I	GRGCYC	1 cut(s)	705
EgeI	GGCGCC	1 cut(s)	342
EheI	GGCGCC	1 cut(s)	342
ErhI	CCWWGG	4 cut(s)	694, 1740, 2083, 2168
FaeI	CATG	5 cut(s)	648, 899, 1031, 1744, 2172
FaqI	GGGAC	1 cut(s)	474
FatI	CATG	5 cut(s)	644, 895, 1027, 1740, 2168
FbaI	TGATCA	1 cut(s)	367
FblI	GTMKAC	1 cut(s)	1033
Fnu4HI	GCNGC	6 cut(s)	233, 299, 336, 339, 800, 2133
FriOI	GRGCYC	1 cut(s)	705
Fsp4HI	GCNGC	6 cut(s)	233, 299, 336, 339, 800, 2133
FspBI	CTAG	3 cut(s)	41, 474, 1652
FspI	TGCGCA	1 cut(s)	2025
GlaI	GCGC	5 cut(s)	342, 794, 803, 1100, 2025
GluI	GCNGC	6 cut(s)	233, 299, 336, 339, 800, 2133
GsuI	CTGGAG	1 cut(s)	528
HaeII	RGCGCY	3 cut(s)	344, 796, 1102
HaeIII	GGCC	4 cut(s)	693, 2043, 2088, 2094
HapII	CCGG	3 cut(s)	28, 344, 1070
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	5 cut(s)	343, 795, 804, 1101, 2026
Hin1I	GRCGYC	1 cut(s)	341
Hin1II	CATG	5 cut(s)	648, 899, 1031, 1744, 2172
Hin6I	GCGC	5 cut(s)	341, 793, 802, 1099, 2024
HinP1I	GCGC	5 cut(s)	341, 793, 802, 1099, 2024
HincII	GTYRAC	1 cut(s)	2230
HindII	GTYRAC	1 cut(s)	2230
HindIII	AAGCTT	3 cut(s)	245, 589, 1367
HinfI	GANTC	9 cut(s)	44, 62, 210, 892, 1091, 1230, 1298, 1914, 2138
HpaII	CCGG	3 cut(s)	28, 344, 1070
HphI	GGTGA	3 cut(s)	901, 1019, 2157
Hpy166II	GTNNAC	5 cut(s)	977, 1034, 2146, 2230, 2385
Hpy188I	TCNGA	7 cut(s)	10, 67, 202, 1096, 1455, 1617, 2067
Hpy188III	TCNNGA	5 cut(s)	938, 1070, 1105, 1328, 1906
Hpy8I	GTNNAC	5 cut(s)	977, 1034, 2146, 2230, 2385
Hpy99I	CGWCG	2 cut(s)	194, 2345
HpyAV	CCTTC	5 cut(s)	598, 1102, 1570, 1579, 1855
HpyCH4III	ACNGT	9 cut(s)	556, 621, 626, 974, 1595, 1633, 2192, 2222, 2366
HpyCH4IV	ACGT	3 cut(s)	405, 1565, 1626
HpyF10VI	GCNNNNNNNGC	9 cut(s)	332, 799, 801, 808, 877, 1160, 1283, 1586, 2324
HpyF3I	CTNAG	8 cut(s)	464, 813, 1047, 1136, 1329, 1340, 1545, 2064
HpySE526I	ACGT	3 cut(s)	405, 1565, 1626
Hsp92I	GRCGYC	1 cut(s)	341
Hsp92II	CATG	5 cut(s)	648, 899, 1031, 1744, 2172
HspAI	GCGC	5 cut(s)	341, 793, 802, 1099, 2024
KasI	GGCGCC	1 cut(s)	340
Kpn2I	TCCGGA	1 cut(s)	1069
Ksp22I	TGATCA	1 cut(s)	367
Kzo9I	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
LguI	GCTCTTC	2 cut(s)	455, 603
LmnI	GCTCC	5 cut(s)	180, 700, 877, 1520, 1804
Lsp1109I	GCAGC	4 cut(s)	244, 310, 811, 2144
LweI	GCATC	6 cut(s)	14, 1141, 1429, 1786, 2011, 2119
MabI	ACCWGGT	1 cut(s)	845
MaeI	CTAG	3 cut(s)	41, 474, 1652
MaeII	ACGT	3 cut(s)	405, 1565, 1626
MaeIII	GTNAC	5 cut(s)	152, 160, 1561, 1627, 2267
MalI	GATC	9 cut(s)	140, 150, 369, 1020, 1079, 1476, 1704, 1749, 2164
MboI	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
MfeI	CAATTG	2 cut(s)	486, 1923
MflI	RGATCY	1 cut(s)	1077
MhlI	GDGCHC	1 cut(s)	705
MlsI	TGGCCA	1 cut(s)	2088
MluNI	TGGCCA	1 cut(s)	2088
Mly113I	GGCGCC	1 cut(s)	341
MlyI	GAGTC	4 cut(s)	38, 71, 1100, 1224
MmeI	TCCRAC	4 cut(s)	166, 180, 735, 905
Mox20I	TGGCCA	1 cut(s)	2088
Mph1103I	ATGCAT	1 cut(s)	650
MroI	TCCGGA	1 cut(s)	1069
MroXI	GAANNNNTTC	2 cut(s)	407, 2076
MscI	TGGCCA	1 cut(s)	2088
MslI	CAYNNNNRTG	2 cut(s)	527, 1676
Msp20I	TGGCCA	1 cut(s)	2088
MspCI	CTTAAG	1 cut(s)	1370
MspI	CCGG	3 cut(s)	28, 344, 1070
MspR9I	CCNGG	4 cut(s)	847, 2045, 2090, 2096
MunI	CAATTG	2 cut(s)	486, 1923
Mva1269I	GAATGC	1 cut(s)	230
MvaI	CCWGG	4 cut(s)	847, 2045, 2090, 2096
MvnI	CGCG	1 cut(s)	804
MwoI	GCNNNNNNNGC	9 cut(s)	332, 799, 801, 808, 877, 1160, 1283, 1586, 2324
NarI	GGCGCC	1 cut(s)	341
NcoI	CCATGG	2 cut(s)	1740, 2168
NdeII	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
NlaIII	CATG	5 cut(s)	648, 899, 1031, 1744, 2172
NlaIV	GGNNCC	2 cut(s)	342, 1494
NsbI	TGCGCA	1 cut(s)	2025
NsiI	ATGCAT	1 cut(s)	650
NspI	RCATGY	1 cut(s)	648
OliI	CACNNNNGTG	1 cut(s)	527
PciSI	GCTCTTC	2 cut(s)	455, 603
PcsI	WCGNNNNNNNCGW	1 cut(s)	186
PctI	GAATGC	1 cut(s)	230
PdmI	GAANNNNTTC	2 cut(s)	407, 2076
PfeI	GAWTC	5 cut(s)	210, 892, 1298, 1914, 2138
PkrI	GCNGC	6 cut(s)	234, 300, 337, 340, 801, 2134
PleI	GAGTC	4 cut(s)	38, 70, 1099, 1224
PluTI	GGCGCC	1 cut(s)	344
PpsI	GAGTC	4 cut(s)	38, 70, 1099, 1224
Psp124BI	GAGCTC	1 cut(s)	705
Psp1406I	AACGTT	1 cut(s)	405
Psp6I	CCWGG	4 cut(s)	845, 2043, 2088, 2094
PspGI	CCWGG	4 cut(s)	845, 2043, 2088, 2094
PspN4I	GGNNCC	2 cut(s)	342, 1494
PspPI	GGNCC	2 cut(s)	630, 2092
PstNI	CAGNNNCTG	3 cut(s)	65, 1544, 2141
PsuI	RGATCY	1 cut(s)	1077
RsaI	GTAC	5 cut(s)	206, 623, 971, 1118, 2100
RsaNI	GTAC	5 cut(s)	205, 622, 970, 1117, 2099
RseI	CAYNNNNRTG	2 cut(s)	527, 1676
SacI	GAGCTC	1 cut(s)	705
SapI	GCTCTTC	2 cut(s)	455, 603
SatI	GCNGC	6 cut(s)	233, 299, 336, 339, 800, 2133
Sau3AI	GATC	9 cut(s)	138, 148, 367, 1018, 1077, 1474, 1702, 1747, 2162
Sau96I	GGNCC	2 cut(s)	630, 2092
SchI	GAGTC	4 cut(s)	38, 71, 1100, 1224
ScrFI	CCNGG	4 cut(s)	847, 2045, 2090, 2096
SduI	GDGCHC	1 cut(s)	705
SexAI	ACCWGGT	1 cut(s)	845
SfaNI	GCATC	6 cut(s)	14, 1141, 1429, 1786, 2011, 2119
SfcI	CTRYAG	1 cut(s)	1698
SfoI	GGCGCC	1 cut(s)	342
SinI	GGWCC	1 cut(s)	630
SmiMI	CAYNNNNRTG	2 cut(s)	527, 1676
SmlI	CTYRAG	3 cut(s)	302, 1370, 2298
SmoI	CTYRAG	3 cut(s)	302, 1370, 2298
SsiI	CCGC	8 cut(s)	53, 335, 338, 398, 804, 830, 1334, 1761
SspDI	GGCGCC	1 cut(s)	340
SspMI	CTAG	3 cut(s)	41, 474, 1652
SstI	GAGCTC	1 cut(s)	705
StyD4I	CCNGG	4 cut(s)	845, 2043, 2088, 2094
StyI	CCWWGG	4 cut(s)	694, 1740, 2083, 2168
TaaI	ACNGT	9 cut(s)	556, 621, 626, 974, 1595, 1633, 2192, 2222, 2366
TaiI	ACGT	3 cut(s)	408, 1568, 1629
TaqI	TCGA	3 cut(s)	1868, 2016, 2115
TatI	WGTACW	3 cut(s)	621, 969, 1116
TauI	GCSGC	2 cut(s)	338, 341
TfiI	GAWTC	5 cut(s)	210, 892, 1298, 1914, 2138
TscAI	CASTG	3 cut(s)	561, 1191, 1608
TseI	GCWGC	4 cut(s)	232, 298, 799, 2132
TspGWI	ACGGA	2 cut(s)	927, 1070
TspRI	CASTG	3 cut(s)	561, 1191, 1608
Vha464I	CTTAAG	1 cut(s)	1370
VpaK11BI	GGWCC	1 cut(s)	630
XagI	CCTNNNNNAGG	2 cut(s)	2087, 2259
XapI	RAATTY	6 cut(s)	964, 1241, 2034, 2076, 2106, 2178
XceI	RCATGY	1 cut(s)	648
XmiI	GTMKAC	1 cut(s)	1033
XmnI	GAANNNNTTC	2 cut(s)	407, 2076
XspI	CTAG	3 cut(s)	41, 474, 1652
Zsp2I	ATGCAT	1 cut(s)	650

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.