Rw2G018410

ADP binding

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
23745039 .. 23746386
1348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G018410.1

Sequence Viewer

Length: 891 bp
ATGGCATTGGATGTTACTGAATTCCTCTGGAACAAGTTCTTGAAGTCTCTGGCAGAGCTAGAGTCTGAATCTAGTTCAGGTTTTGTTACCATCTCTTTCTTCAACTCATCATTGAAAAATCTCGTGTCTAACTTCAAATCAATCAGAGATGTTGTGATTGAGAGAGATCTAATTTCGGAACGTTATACCTACTCTAAAACTATCGATGTGCTCTACGAGCTCAACGACGCGTTGGCCGAGTGCCGAATCATCTCACATGAGTGCAAAGAAATTAAGAATAAGTTGTCAAGCCTCAACCCTCGAAGAGTTATTTCTCTCACCACGATCAAGGAAAAGCTGAAAACAATTGAAGATAAGCTTTACAATTTGGCGTCGTCACCGCAAGAAACTGGCCTTCCCCTGGTGATGGCTGGACCTATGCTTACACCAGAAGTTTTCGGACCAGAAGTTTTCGGATTTGAGAAGCTATCAGAGGAGATCGAGGAAGCGAAGATTGTTGGCCTTGATAGTCTCCTGGAAAAGCTGGGCCAACTGTTATCGGATAAAAGCTATTTGATTGTGTTGGATGATGTGTGTTTTCAGCTGATTAACATTATGGAACGCTTAGTCAGTGGATTGCCCAAGGGTAGTGGTGGTGCTGTCATCGTCACTACTAGACTGAAGGAAGTGGCTCAAAAGCTTGGGGACCACCATCACTTCGTTCGTGTTAAGCCTCTGCCTAGAAAAAGTTGCTCGAGTATATTCGAGGAGACCATTGAAAATGAGAAGAAATTTTCAAGCATGTCACCTGGTGAAACTCTGGAAAAGATTAAGGAGAAGATGAAGGATCAATGTCATGGTCTGCCGTTGGTTGCGAAGGCACTGGCACAGATCATTCCTGAAACTTTATAG

Protein Analysis

296

Amino Acids

33.21

Weight (kDa)

5.72

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 161 - 252 7.5e-11 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 230
AciI CCGC 1 cut(s) 380
AclI AACGTT 1 cut(s) 181
AclWI GGATC 1 cut(s) 834
AcoI YGGCCR 1 cut(s) 234
AcsI RAATTY 2 cut(s) 20, 770
AcuI CTGAAG 1 cut(s) 680
AcyI GRCGYC 1 cut(s) 371
AdeI CACNNNGTG 1 cut(s) 791
AfiI CCNNNNNNNGG 2 cut(s) 400, 406
AflIII ACRYGT 1 cut(s) 228
AgsI TTSAA 7 cut(s) 43, 103, 115, 136, 350, 758, 777
AjnI CCWGG 3 cut(s) 399, 513, 787
AleI CACNNNNGTG 1 cut(s) 259
AluBI AGCT 9 cut(s) 58, 220, 337, 358, 466, 523, 549, 583, 679
AluI AGCT 9 cut(s) 58, 220, 337, 358, 466, 523, 549, 583, 679
Alw21I GWGCWC 2 cut(s) 213, 222
Alw26I GTCTC 3 cut(s) 51, 515, 743
AlwI GGATC 1 cut(s) 834
Ama87I CYCGRG 1 cut(s) 733
AoxI GGCC 4 cut(s) 234, 391, 499, 526
ApoI RAATTY 2 cut(s) 20, 770
Asp700I GAANNNNTTC 1 cut(s) 35
AspS9I GGNCC 4 cut(s) 413, 440, 526, 685
AsuHPI GGTGA 5 cut(s) 310, 369, 415, 777, 803
AvaI CYCGRG 1 cut(s) 733
AvaII GGWCC 3 cut(s) 413, 440, 685
BanII GRGCYC 1 cut(s) 222
BauI CACGAG 1 cut(s) 122
Bbv12I GWGCWC 2 cut(s) 213, 222
BccI CCATC 3 cut(s) 98, 400, 699
BceAI ACGGC 1 cut(s) 829
BciT130I CCWGG 3 cut(s) 401, 515, 789
BcoDI GTCTC 3 cut(s) 51, 515, 743
BfaI CTAG 4 cut(s) 59, 72, 654, 720
BglII AGATCT 1 cut(s) 166
Bme1390I CCNGG 3 cut(s) 401, 515, 789
Bme18I GGWCC 3 cut(s) 413, 440, 685
BmeT110I CYCGRG 1 cut(s) 733
BmgT120I GGNCC 4 cut(s) 413, 440, 526, 685
BmiI GGNNCC 1 cut(s) 686
BmrFI CCNGG 3 cut(s) 401, 515, 789
Bsa29I ATCGAT 1 cut(s) 204
BsaHI GRCGYC 1 cut(s) 371
BsaI GGTCTC 1 cut(s) 743
BsaJI CCNNGG 2 cut(s) 399, 621
Bsc4I CCNNNNNNNGG 2 cut(s) 400, 406
Bse1I ACTGG 2 cut(s) 394, 867
BseBI CCWGG 3 cut(s) 401, 515, 789
BseCI ATCGAT 1 cut(s) 204
BseDI CCNNGG 2 cut(s) 399, 621
BseGI GGATG 2 cut(s) 16, 571
BseLI CCNNNNNNNGG 2 cut(s) 400, 406
BseNI ACTGG 2 cut(s) 394, 867
BseRI GAGGAG 2 cut(s) 488, 761
BseYI CCCAGC 1 cut(s) 523
Bsh1236I CGCG 1 cut(s) 230
BshFI GGCC 4 cut(s) 236, 393, 501, 528
BshVI ATCGAT 1 cut(s) 204
BsiHKAI GWGCWC 2 cut(s) 213, 222
BsiHKCI CYCGRG 1 cut(s) 733
BslFI GGGAC 1 cut(s) 698
BslI CCNNNNNNNGG 2 cut(s) 400, 406
BsmAI GTCTC 3 cut(s) 51, 515, 743
BsmFI GGGAC 1 cut(s) 698
BsnI GGCC 4 cut(s) 236, 393, 501, 528
Bso31I GGTCTC 1 cut(s) 743
BsoBI CYCGRG 1 cut(s) 733
Bsp1286I GDGCHC 2 cut(s) 213, 222
Bsp143I GATC 5 cut(s) 166, 324, 477, 826, 870
BspACI CCGC 1 cut(s) 380
BspANI GGCC 4 cut(s) 236, 393, 501, 528
BspDI ATCGAT 1 cut(s) 204
BspFNI CGCG 1 cut(s) 230
BspLI GGNNCC 1 cut(s) 686
BspPI GGATC 1 cut(s) 834
BspTNI GGTCTC 1 cut(s) 743
BsrI ACTGG 2 cut(s) 394, 867
BssECI CCNNGG 2 cut(s) 399, 621
BssMI GATC 5 cut(s) 166, 324, 477, 826, 870
BssNI GRCGYC 1 cut(s) 371
BssSI CACGAG 1 cut(s) 122
BssT1I CCWWGG 1 cut(s) 621
Bst2BI CACGAG 1 cut(s) 122
Bst2UI CCWGG 3 cut(s) 401, 515, 789
Bst4CI ACNGT 1 cut(s) 534
Bst6I CTCTTC 1 cut(s) 298
BstACI GRCGYC 1 cut(s) 371
BstDEI CTNAG 1 cut(s) 604
BstF5I GGATG 2 cut(s) 16, 571
BstFNI CGCG 1 cut(s) 230
BstKTI GATC 5 cut(s) 169, 327, 480, 829, 873
BstMAI GTCTC 3 cut(s) 51, 515, 743
BstMBI GATC 5 cut(s) 166, 324, 477, 826, 870
BstMWI GCNNNNNNNGC 1 cut(s) 217
BstNI CCWGG 3 cut(s) 401, 515, 789
BstNSI RCATGY 1 cut(s) 784
BstSCI CCNGG 3 cut(s) 399, 513, 787
BstUI CGCG 1 cut(s) 230
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
Bsu15I ATCGAT 1 cut(s) 204
BsuRI GGCC 4 cut(s) 236, 393, 501, 528
BsuTUI ATCGAT 1 cut(s) 204
BtsCI GGATG 2 cut(s) 16, 571
BtsIMutI CAGTG 2 cut(s) 616, 860
Cfr13I GGNCC 4 cut(s) 413, 440, 526, 685
ClaI ATCGAT 1 cut(s) 204
CseI GACGC 2 cut(s) 236, 360
CsiI ACCWGGT 1 cut(s) 787
CspCI CAANNNNNGTGG 2 cut(s) 610, 645
CviAII CATG 3 cut(s) 257, 781, 836
DdeI CTNAG 1 cut(s) 604
DpnI GATC 5 cut(s) 168, 326, 479, 828, 872
DpnII GATC 5 cut(s) 166, 324, 477, 826, 870
DraIII CACNNNGTG 1 cut(s) 791
EaeI YGGCCR 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 298
EarI CTCTTC 1 cut(s) 298
Ecl136II GAGCTC 1 cut(s) 220
Eco130I CCWWGG 1 cut(s) 621
Eco24I GRGCYC 1 cut(s) 222
Eco31I GGTCTC 1 cut(s) 743
Eco47I GGWCC 3 cut(s) 413, 440, 685
Eco53kI GAGCTC 1 cut(s) 220
Eco57I CTGAAG 1 cut(s) 680
Eco88I CYCGRG 1 cut(s) 733
EcoICRI GAGCTC 1 cut(s) 220
EcoRI GAATTC 1 cut(s) 20
EcoRII CCWGG 3 cut(s) 399, 513, 787
EcoT14I CCWWGG 1 cut(s) 621
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 1 cut(s) 621
FaeI CATG 3 cut(s) 260, 784, 839
FaiI YATR 8 cut(s) 186, 258, 419, 596, 740, 782, 837, 889
FalI AAGNNNNNCTT 2 cut(s) 342, 374
FaqI GGGAC 1 cut(s) 698
FatI CATG 3 cut(s) 256, 780, 835
FokI GGATG 2 cut(s) 23, 578
FriOI GRGCYC 1 cut(s) 222
FspBI CTAG 4 cut(s) 59, 72, 654, 720
GsaI CCCAGC 1 cut(s) 527
HaeIII GGCC 4 cut(s) 236, 393, 501, 528
HgaI GACGC 2 cut(s) 236, 360
Hin1I GRCGYC 1 cut(s) 371
Hin1II CATG 3 cut(s) 260, 784, 839
HindIII AAGCTT 2 cut(s) 356, 677
HinfI GANTC 3 cut(s) 62, 68, 246
HphI GGTGA 5 cut(s) 310, 369, 415, 777, 803
Hpy188I TCNGA 7 cut(s) 67, 146, 178, 440, 455, 472, 541
Hpy188III TCNNGA 4 cut(s) 28, 40, 800, 878
Hpy99I CGWCG 2 cut(s) 230, 376
HpyAV CCTTC 4 cut(s) 404, 655, 817, 850
HpyCH4III ACNGT 1 cut(s) 534
HpyCH4IV ACGT 1 cut(s) 181
HpyCH4V TGCA 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 1 cut(s) 217
HpyF3I CTNAG 1 cut(s) 604
HpySE526I ACGT 1 cut(s) 181
Hsp92I GRCGYC 1 cut(s) 371
Hsp92II CATG 3 cut(s) 260, 784, 839
Kzo9I GATC 5 cut(s) 166, 324, 477, 826, 870
MabI ACCWGGT 1 cut(s) 787
MaeI CTAG 4 cut(s) 59, 72, 654, 720
MaeII ACGT 1 cut(s) 181
MaeIII GTNAC 5 cut(s) 13, 85, 375, 646, 783
MalI GATC 5 cut(s) 168, 326, 479, 828, 872
MboI GATC 5 cut(s) 166, 324, 477, 826, 870
MboII GAAGA 6 cut(s) 91, 315, 362, 502, 778, 829
MfeI CAATTG 1 cut(s) 345
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 2 cut(s) 213, 222
MluCI AATT 6 cut(s) 20, 171, 270, 345, 364, 770
MluI ACGCGT 1 cut(s) 228
MlyI GAGTC 1 cut(s) 71
MmeI TCCRAC 1 cut(s) 543
MnlI CCTC 7 cut(s) 35, 302, 309, 466, 475, 723, 739
MroXI GAANNNNTTC 1 cut(s) 35
MseI TTAA 4 cut(s) 273, 588, 708, 810
MslI CAYNNNNRTG 1 cut(s) 259
MspA1I CMGCKG 1 cut(s) 583
MspR9I CCNGG 3 cut(s) 401, 515, 789
MunI CAATTG 1 cut(s) 345
MvaI CCWGG 3 cut(s) 401, 515, 789
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 1 cut(s) 217
NdeII GATC 5 cut(s) 166, 324, 477, 826, 870
NlaIII CATG 3 cut(s) 260, 784, 839
NlaIV GGNNCC 1 cut(s) 686
NmeAIII GCCGAG 1 cut(s) 262
NmuCI GTSAC 3 cut(s) 375, 646, 783
NspI RCATGY 1 cut(s) 784
OliI CACNNNNGTG 1 cut(s) 259
PaeR7I CTCGAG 1 cut(s) 733
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 234
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 2 cut(s) 68, 246
PfoI TCCNGGA 1 cut(s) 513
PleI GAGTC 1 cut(s) 70
PpsI GAGTC 1 cut(s) 70
Psp124BI GAGCTC 1 cut(s) 222
Psp1406I AACGTT 1 cut(s) 181
Psp6I CCWGG 3 cut(s) 399, 513, 787
PspFI CCCAGC 1 cut(s) 523
PspGI CCWGG 3 cut(s) 399, 513, 787
PspN4I GGNNCC 1 cut(s) 686
PspPI GGNCC 4 cut(s) 413, 440, 526, 685
PspXI VCTCGAGB 1 cut(s) 733
PsuI RGATCY 1 cut(s) 166
PvuII CAGCTG 1 cut(s) 583
RseI CAYNNNNRTG 1 cut(s) 259
SacI GAGCTC 1 cut(s) 222
SaqAI TTAA 4 cut(s) 273, 588, 708, 810
Sau3AI GATC 5 cut(s) 166, 324, 477, 826, 870
Sau96I GGNCC 4 cut(s) 413, 440, 526, 685
SchI GAGTC 1 cut(s) 71
ScrFI CCNGG 3 cut(s) 401, 515, 789
SduI GDGCHC 2 cut(s) 213, 222
SexAI ACCWGGT 1 cut(s) 787
Sfr274I CTCGAG 1 cut(s) 733
SinI GGWCC 3 cut(s) 413, 440, 685
SlaI CTCGAG 1 cut(s) 733
SmiMI CAYNNNNRTG 1 cut(s) 259
SmlI CTYRAG 1 cut(s) 733
SmoI CTYRAG 1 cut(s) 733
Sse9I AATT 6 cut(s) 20, 171, 270, 345, 364, 770
SsiI CCGC 1 cut(s) 380
SspMI CTAG 4 cut(s) 59, 72, 654, 720
SstI GAGCTC 1 cut(s) 222
StyD4I CCNGG 3 cut(s) 399, 513, 787
StyI CCWWGG 1 cut(s) 621
TaaI ACNGT 1 cut(s) 534
TaiI ACGT 1 cut(s) 184
TaqI TCGA 5 cut(s) 204, 301, 480, 734, 744
TasI AATT 6 cut(s) 20, 171, 270, 345, 364, 770
TfiI GAWTC 2 cut(s) 68, 246
Tru1I TTAA 4 cut(s) 273, 588, 708, 810
Tru9I TTAA 4 cut(s) 273, 588, 708, 810
TscAI CASTG 2 cut(s) 616, 867
TseFI GTSAC 3 cut(s) 375, 646, 783
Tsp45I GTSAC 3 cut(s) 375, 646, 783
TspDTI ATGAA 1 cut(s) 836
TspRI CASTG 2 cut(s) 616, 867
VpaK11BI GGWCC 3 cut(s) 413, 440, 685
XapI RAATTY 2 cut(s) 20, 770
XceI RCATGY 1 cut(s) 784
XhoI CTCGAG 1 cut(s) 733
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 4 cut(s) 59, 72, 654, 720
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.