Prupe.3G176200_v2.0.a1

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000202
Physical Location & Seq
Forward (+)
19349245 .. 19359156
9912 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G176200.12

Sequence Viewer

Length: 2610 bp
ATGGCAGGGGATGTTGCTCAATTTCTCCAGAAAAAGTTCCTGGCATCTCTTAGCGAGACAGAGTCTGAATTATCAGGTGCTGTTCTCATTTCTGATTTGGGAGCAATCAAAGATATTGTAATATCTATAGATACTCGAAGACTTACCGGAGATTACTACTGTCGATTTATCTCTGTGCTCCTGGACCTCACCGAAGCTTTGACCAAGTGCCAGGTCTTCTCACATGAGTGGAAGATGCATAGTCATCGCAAGACTCATTTAGCAGTCTTCAACCATTTGAGTTTGAGGAAGATTTGTTTCGTGTGGAAGATGAAGAAGCGTCTGGCTGCAATAAAACGTATCTTCGAGGCTGAGTTTATGAAAAAGGAAGAAAGAATTTATAACTTGAGGGAATCATCAAGTCGTCCTTATCCTGAAGAGAATTTAGAGAGCGAACTACCTGTAGTGGAGGGTGAAGTTGTGGGATTTGATGAGCAATTATGGAAGATTAGGAACTTTCTTTTAAAACCATCGCCGTCGTCAGGTGCTGGATTTGCGGCAGTTGGGATACTGGGCATTGCAGGCGCAGGTAAGACCACTCTGGTGCGCGAGTTTTTGAGTTGGTGGATAGTGCGAGGTGAATTTTCTCCTATAATTTGGTTATGCTTGTCGAATATAATCAAAGAAAATAAACAAGGAGAAGAAGAAATTGAGGTCAGCATTGTGAAATGTATGCTTAGTAAGCTGGACCATGATGCCGTTGTCGATGGAGATGACATCATCCAGGAGGAGGAGAAGACAATAAGAAGTAATAATTCTGGTCATCTCCTTGCTGCGCTCTTGGAAAGGCTCAACCAAGGTTTATCAGATAAAAGGTATTTGATTGTGTTGGATGATGTGTGGCACATGAACGATTTCTACTCAGATTTAGGACATCTACTTGAGGTTCAGGAAGTTGGGGATCGCTTGTCGCACGGATTGCCTAAGGGTAGTGGTGGTGCGGTCATCGTCACTAGTAGGATACCGGAAGTGGTTGAAGCTATGGTGGTACCGGCGGAGGGGTCAGATCAACATTATAACAGCTTGATTATTCGTCTTGAGCCTTTGGACAGACAAAGCTGCTGGGGTATATTTAAGGACACTGTTTATGGTTATCTTCCTGATTTTGAATATCAACAACATTTGGAAAAGGTTGAGATTGAAATTAAGGATCTATGTGATGGTCTACCATTGGCCGCTAGGACACTCGCAGAAATCATGTCCCATAAGTCCCATAGTTTACGGTGGACTTCTCCGCCCTACCGCAAATCTGAGGAGTTGCTTCAATTACCTGATTTCTTCTTCGGTATCCCAATTGGCAGGAGGACTTATCCGCCCTACCGCAAATCTGAGGAGTTGCTTCAATTACCTGATTTCTCCTTCGGTATCCCAATGTTGGTGTTTATTGATATGCGACGAGAAGAAGAACTGATTTATAAATTTGGCAACCACCTTTATAGCGACCAGGTTTTTGGTGTACTACTGGAAGAACCAAATATGTATAATAATCCTGAGACGGTGTTAAAGGATGTTTATGGTACTCTAGAAAAGCTTAAGCAAAATGGTTATTATGGTTTTGCTTCTGAAATTCAAAAGAAGATGAGGATTATAGTTGTTGGCGAAGATTATGTTGTAAATTGGATTTTGGGAGTTATCTGTGATCTTAAATTGCCAGAGTCACCCTCCATTGCTCCGGTACCACCACCGACTTCAAAATGGGGCTCGAACTGGTACAATGAGCACCAATATGGAATCGCTGCTTCGTTTGGATGGAAGAAAATTTCAAATATATCACCGCTGCGATCGTACCTTGTTGACGTAGCACTGGCAAAACCGATGAGAATTGACAGGTGCCATGAGAGTTTGAACCTAAAACCATCCAGTATACAAGTCAATGTCATTTTTCCACTAAGCTGGCATTGTCTCATTAGGATGAAACACACTCAATCTTCTACAAGTCAACAAGAAAAACCATATTCTTCTTTTATGGACCAATTACCACATTATTTGCATGAGGTTGGAGATGTTGGAAAAGCGGATAATCCAATATTACACGGACGATTTTGGTACTACTTAATGTTGGCTGTCCACGATTGGAGTTCAAGGGACGACCTAACCTCAGTTGCAATAGTAAAGGTGTTGAATCATCTTGGCCAGTGGGAAATACTTCACATTCCTGGAAGAATGAATTCAATTTGTTGTCTTAACTTACCTATCTTTGGTCCAAGAGATGATCGTTGGGTGACAATAAATACGATGGAAGATGGAAAAACACCCACGAACCTATCTTTCATAGACGATAGATGCCTCAAAGTTATCGGTTCCATAAAGCGATATTCGGACGATGGCAGAGACCGGACTCTCCTTGATCAGGTACGAGGAATTCGCTTCGAGTTTATTAAGGGTGCAGAAGGGTATGCGAGAATAACTATTGATGGAGCACCAGAGTTTGATATCCCTACTGATGAATTGGCTGAGATTGAAATCTCTTACCACGGTCAAGTCAACATTCTTGCCGGTCCAAATTGCCCAGCAAAAAGTATCCATCTCTCCTCACAATCCAGTGTTTCCCAAGCTAACGCTAAGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

870

Amino Acids

98.95

Weight (kDa)

5.75

Isoelectric Point (pI)

45.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 381, 1056, 1455
Acc36I ACCTGC 1 cut(s) 557
Acc65I GGTACC 2 cut(s) 1027, 1714
AccB1I GGYRCC 3 cut(s) 1027, 1714, 1869
AccI GTMKAC 2 cut(s) 1204, 1903
AccII CGCG 1 cut(s) 588
AclWI GGATC 2 cut(s) 948, 1197
AcoI YGGCCR 2 cut(s) 1212, 2170
AcsI RAATTY 8 cut(s) 375, 421, 620, 1457, 1605, 1797, 2206, 2400
AcuI CTGAAG 1 cut(s) 435
AfaI GTAC 8 cut(s) 1029, 1497, 1558, 1716, 1751, 1826, 2087, 2394
AfiI CCNNNNNNNGG 6 cut(s) 521, 769, 1037, 1414, 2237, 2389
AflII CTTAAG 1 cut(s) 1571
AhlI ACTAGT 1 cut(s) 992
AjnI CCWGG 6 cut(s) 39, 180, 210, 762, 1482, 2194
AleI CACNNNNGTG 2 cut(s) 226, 581
AluBI AGCT 8 cut(s) 197, 724, 1019, 1062, 1098, 1570, 1932, 2594
AluI AGCT 8 cut(s) 197, 724, 1019, 1062, 1098, 1570, 1932, 2594
Alw21I GWGCWC 3 cut(s) 180, 1761, 2461
Alw26I GTCTC 4 cut(s) 50, 1526, 1946, 2364
AlwI GGATC 2 cut(s) 948, 1197
AlwNI CAGNNNCTG 3 cut(s) 65, 80, 527
AoxI GGCC 2 cut(s) 1212, 2170
ApeKI GCWGC 5 cut(s) 326, 812, 1098, 1775, 1816
ApoI RAATTY 8 cut(s) 375, 421, 620, 1457, 1605, 1797, 2206, 2400
ArsI GACNNNNNNTTYG 2 cut(s) 1472, 1504
Asp700I GAANNNNTTC 4 cut(s) 35, 893, 2184, 2206
Asp718I GGTACC 2 cut(s) 1027, 1714
AspLEI GCGC 3 cut(s) 566, 588, 817
AspS9I GGNCC 5 cut(s) 184, 727, 2008, 2240, 2537
AsuHPI GGTGA 6 cut(s) 181, 464, 629, 1689, 1803, 2272
AvaII GGWCC 5 cut(s) 184, 727, 2008, 2240, 2537
AxyI CCTNAGG 1 cut(s) 963
BalI TGGCCA 1 cut(s) 2172
BanI GGYRCC 3 cut(s) 1027, 1714, 1869
BanII GRGCYC 1 cut(s) 1742
BbsI GAAGAC 4 cut(s) 145, 208, 259, 782
Bbv12I GWGCWC 3 cut(s) 180, 1761, 2461
BbvI GCAGC 5 cut(s) 313, 799, 1085, 1762, 1803
BceAI ACGGC 2 cut(s) 499, 722
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BciT130I CCWGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
BciVI GTATCC 5 cut(s) 540, 993, 1337, 1415, 2570
BclI TGATCA 1 cut(s) 2386
BcoDI GTCTC 4 cut(s) 50, 1526, 1946, 2364
BcuI ACTAGT 1 cut(s) 992
BfaI CTAG 3 cut(s) 993, 1218, 1562
BfmI CTRYAG 2 cut(s) 126, 441
BfrI CTTAAG 1 cut(s) 1571
BfuAI ACCTGC 1 cut(s) 557
BfuI GTATCC 5 cut(s) 540, 993, 1337, 1415, 2570
BisI GCNGC 7 cut(s) 327, 537, 813, 1099, 1215, 1776, 1817
BlsI GCNGC 7 cut(s) 328, 538, 814, 1100, 1216, 1777, 1818
Bme1390I CCNGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
Bme18I GGWCC 5 cut(s) 184, 727, 2008, 2240, 2537
BmgT120I GGNCC 5 cut(s) 184, 727, 2008, 2240, 2537
BmiI GGNNCC 4 cut(s) 1029, 1716, 1871, 2341
BmrFI CCNGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
BmrI ACTGGG 1 cut(s) 560
BmsI GCATC 4 cut(s) 53, 225, 724, 2312
BmuI ACTGGG 1 cut(s) 560
BpiI GAAGAC 4 cut(s) 145, 208, 259, 782
BplI GAGNNNNNCTC 2 cut(s) 1685, 1717
BpmI CTGGAG 1 cut(s) 11
Bpu10I CCTNAGC 1 cut(s) 2601
BpuEI CTTGAG 3 cut(s) 406, 941, 1097
BsaBI GATNNNNATC 1 cut(s) 2501
BsaI GGTCTC 1 cut(s) 2364
BsaJI CCNNGG 2 cut(s) 835, 2512
BsaWI WCCGGW 4 cut(s) 146, 1003, 1711, 2373
Bsc4I CCNNNNNNNGG 6 cut(s) 521, 769, 1037, 1414, 2237, 2389
Bse118I RCCGGY 2 cut(s) 1030, 2534
Bse1I ACTGG 7 cut(s) 555, 1506, 1751, 1848, 1899, 2173, 2580
Bse21I CCTNAGG 1 cut(s) 963
Bse3DI GCAATG 2 cut(s) 555, 1704
Bse8I GATNNNNATC 1 cut(s) 2501
BseBI CCWGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
BseDI CCNNGG 2 cut(s) 835, 2512
BseGI GGATG 7 cut(s) 16, 759, 877, 1552, 1793, 1895, 1956
BseJI GATNNNNATC 1 cut(s) 2501
BseLI CCNNNNNNNGG 6 cut(s) 521, 769, 1037, 1414, 2237, 2389
BseMI GCAATG 2 cut(s) 555, 1704
BseMII CTCAG 7 cut(s) 342, 915, 1281, 1359, 1521, 2151, 2484
BseNI ACTGG 7 cut(s) 555, 1506, 1751, 1848, 1899, 2173, 2580
BseRI GAGGAG 5 cut(s) 782, 785, 1307, 1385, 2560
BseXI GCAGC 5 cut(s) 313, 799, 1085, 1762, 1803
BseYI CCCAGC 2 cut(s) 1101, 2548
BsgI GTGCAG 1 cut(s) 2445
Bsh1236I CGCG 1 cut(s) 588
Bsh1285I CGRYCG 1 cut(s) 1823
BshFI GGCC 2 cut(s) 1214, 2172
BshNI GGYRCC 3 cut(s) 1027, 1714, 1869
BsiEI CGRYCG 1 cut(s) 1823
BsiHKAI GWGCWC 3 cut(s) 180, 1761, 2461
BsiSI CCGG 6 cut(s) 147, 1004, 1031, 1712, 2374, 2535
BslFI GGGAC 3 cut(s) 1225, 1234, 2138
BslI CCNNNNNNNGG 6 cut(s) 521, 769, 1037, 1414, 2237, 2389
BsmAI GTCTC 4 cut(s) 50, 1526, 1946, 2364
BsmBI CGTCTC 1 cut(s) 1526
BsmFI GGGAC 3 cut(s) 1225, 1234, 2138
BsnI GGCC 2 cut(s) 1214, 2172
Bso31I GGTCTC 1 cut(s) 2364
Bsp1286I GDGCHC 4 cut(s) 180, 1742, 1761, 2461
Bsp143I GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
BspANI GGCC 2 cut(s) 1214, 2172
BspCNI CTCAG 7 cut(s) 343, 914, 1282, 1360, 1522, 2150, 2485
BspFNI CGCG 1 cut(s) 588
BspLI GGNNCC 4 cut(s) 1029, 1716, 1871, 2341
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 2 cut(s) 948, 1197
BspT107I GGYRCC 3 cut(s) 1027, 1714, 1869
BspTI CTTAAG 1 cut(s) 1571
BspTNI GGTCTC 1 cut(s) 2364
BsrDI GCAATG 2 cut(s) 555, 1704
BsrFI RCCGGY 2 cut(s) 1030, 2534
BsrI ACTGG 7 cut(s) 555, 1506, 1751, 1848, 1899, 2173, 2580
BssAI RCCGGY 2 cut(s) 1030, 2534
BssECI CCNNGG 2 cut(s) 835, 2512
BssMI GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
BssNAI GTATAC 1 cut(s) 1904
BssT1I CCWWGG 1 cut(s) 835
Bst1107I GTATAC 1 cut(s) 1904
Bst2UI CCWGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
Bst4CI ACNGT 5 cut(s) 161, 1123, 1263, 1537, 2516
Bst6I CTCTTC 1 cut(s) 411
BstAFI CTTAAG 1 cut(s) 1571
BstAPI GCANNNNNTGC 1 cut(s) 958
BstC8I GCNNGC 2 cut(s) 562, 1934
BstDSI CCRYGG 1 cut(s) 2512
BstENI CCTNNNNNAGG 1 cut(s) 2387
BstF5I GGATG 7 cut(s) 16, 759, 877, 1552, 1793, 1895, 1956
BstFNI CGCG 1 cut(s) 588
BstHHI GCGC 3 cut(s) 566, 588, 817
BstKTI GATC 7 cut(s) 943, 1048, 1192, 1681, 1823, 2254, 2389
BstMAI GTCTC 4 cut(s) 50, 1526, 1946, 2364
BstMBI GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
BstMCI CGRYCG 1 cut(s) 1823
BstMWI GCNNNNNNNGC 4 cut(s) 533, 561, 721, 958
BstNI CCWGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
BstSCI CCNGG 6 cut(s) 39, 180, 210, 762, 1482, 2194
BstSFI CTRYAG 2 cut(s) 126, 441
BstUI CGCG 1 cut(s) 588
BstV1I GCAGC 5 cut(s) 313, 799, 1085, 1762, 1803
BstV2I GAAGAC 4 cut(s) 145, 208, 259, 782
BstX2I RGATCY 1 cut(s) 1189
BstXI CCANNNNNNTGG 2 cut(s) 1490, 1932
BstYI RGATCY 1 cut(s) 1189
BstZ17I GTATAC 1 cut(s) 1904
Bsu36I CCTNAGG 1 cut(s) 963
BsuI GTATCC 5 cut(s) 540, 993, 1337, 1415, 2570
BsuRI GGCC 2 cut(s) 1214, 2172
BtgI CCRYGG 1 cut(s) 2512
BtgZI GCGATG 2 cut(s) 230, 495
BtsCI GGATG 7 cut(s) 16, 759, 877, 1552, 1793, 1895, 1956
BtsIMutI CAGTG 4 cut(s) 1119, 1841, 2180, 2587
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 2 cut(s) 562, 1934
CaiI CAGNNNCTG 3 cut(s) 65, 80, 527
CfoI GCGC 3 cut(s) 566, 588, 817
Cfr10I RCCGGY 2 cut(s) 1030, 2534
Cfr13I GGNCC 5 cut(s) 184, 727, 2008, 2240, 2537
CseI GACGC 1 cut(s) 308
CsiI ACCWGGT 1 cut(s) 1482
Csp6I GTAC 8 cut(s) 1028, 1496, 1557, 1715, 1750, 1825, 2086, 2393
CspCI CAANNNNNGTGG 2 cut(s) 2007, 2042
CviAII CATG 6 cut(s) 224, 731, 886, 1237, 1874, 2030
CviQI GTAC 8 cut(s) 1028, 1496, 1557, 1715, 1750, 1825, 2086, 2393
DpnI GATC 7 cut(s) 942, 1047, 1191, 1680, 1822, 2253, 2388
DpnII GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
DraI TTTAAA 1 cut(s) 504
EaeI YGGCCR 2 cut(s) 1212, 2170
Eam1104I CTCTTC 1 cut(s) 411
EarI CTCTTC 1 cut(s) 411
EciI GGCGGA 3 cut(s) 1049, 1263, 1341
Eco130I CCWWGG 1 cut(s) 835
Eco24I GRGCYC 1 cut(s) 1742
Eco31I GGTCTC 1 cut(s) 2364
Eco32I GATATC 1 cut(s) 2473
Eco47I GGWCC 5 cut(s) 184, 727, 2008, 2240, 2537
Eco57I CTGAAG 1 cut(s) 435
Eco81I CCTNAGG 1 cut(s) 963
EcoNI CCTNNNNNAGG 1 cut(s) 2387
EcoRI GAATTC 2 cut(s) 2206, 2400
EcoRII CCWGG 6 cut(s) 39, 180, 210, 762, 1482, 2194
EcoRV GATATC 1 cut(s) 2473
EcoT14I CCWWGG 1 cut(s) 835
EcoT22I ATGCAT 1 cut(s) 240
EcoT38I GRGCYC 1 cut(s) 1742
ErhI CCWWGG 1 cut(s) 835
Esp3I CGTCTC 1 cut(s) 1526
FaeI CATG 6 cut(s) 227, 734, 889, 1240, 1877, 2033
FalI AAGNNNNNCTT 2 cut(s) 391, 423
FaqI GGGAC 3 cut(s) 1225, 1234, 2138
FatI CATG 6 cut(s) 223, 730, 885, 1236, 1873, 2029
FbaI TGATCA 1 cut(s) 2386
FblI GTMKAC 2 cut(s) 1204, 1903
Fnu4HI GCNGC 7 cut(s) 327, 537, 813, 1099, 1215, 1776, 1817
FokI GGATG 7 cut(s) 23, 746, 884, 1559, 1800, 1882, 1963
FriOI GRGCYC 1 cut(s) 1742
Fsp4HI GCNGC 7 cut(s) 327, 537, 813, 1099, 1215, 1776, 1817
FspBI CTAG 3 cut(s) 993, 1218, 1562
GlaI GCGC 3 cut(s) 565, 587, 816
GluI GCNGC 7 cut(s) 327, 537, 813, 1099, 1215, 1776, 1817
GsaI CCCAGC 2 cut(s) 1105, 2552
GsuI CTGGAG 1 cut(s) 11
HaeIII GGCC 2 cut(s) 1214, 2172
HapII CCGG 6 cut(s) 147, 1004, 1031, 1712, 2374, 2535
HgaI GACGC 1 cut(s) 308
HhaI GCGC 3 cut(s) 566, 588, 817
Hin1II CATG 6 cut(s) 227, 734, 889, 1240, 1877, 2033
Hin6I GCGC 3 cut(s) 564, 586, 815
HinP1I GCGC 3 cut(s) 564, 586, 815
HincII GTYRAC 3 cut(s) 1834, 1979, 2524
HindII GTYRAC 3 cut(s) 1834, 1979, 2524
HindIII AAGCTT 2 cut(s) 195, 1568
HinfI GANTC 7 cut(s) 62, 253, 392, 1694, 1770, 2161, 2377
HpaII CCGG 6 cut(s) 147, 1004, 1031, 1712, 2374, 2535
HphI GGTGA 6 cut(s) 181, 464, 629, 1689, 1803, 2272
Hpy166II GTNNAC 9 cut(s) 1205, 1259, 1266, 1496, 1834, 1904, 1979, 2107, 2524
Hpy188I TCNGA 9 cut(s) 67, 94, 847, 904, 1045, 1291, 1369, 1603, 2359
Hpy188III TCNNGA 7 cut(s) 28, 413, 929, 1076, 1139, 1529, 1562
Hpy8I GTNNAC 9 cut(s) 1205, 1259, 1266, 1496, 1834, 1904, 1979, 2107, 2524
Hpy99I CGWCG 2 cut(s) 520, 1437
HpyAV CCTTC 2 cut(s) 1408, 2423
HpyCH4III ACNGT 5 cut(s) 161, 1123, 1263, 1537, 2516
HpyCH4IV ACGT 2 cut(s) 337, 1836
HpyCH4V TGCA 6 cut(s) 238, 329, 560, 2029, 2144, 2426
HpyF10VI GCNNNNNNNGC 4 cut(s) 533, 561, 721, 958
HpySE526I ACGT 2 cut(s) 337, 1836
Hsp92II CATG 6 cut(s) 227, 734, 889, 1240, 1877, 2033
HspAI GCGC 3 cut(s) 564, 586, 815
KpnI GGTACC 2 cut(s) 1031, 1718
Ksp22I TGATCA 1 cut(s) 2386
Kzo9I GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
LmnI GCTCC 4 cut(s) 101, 183, 1714, 2456
Lsp1109I GCAGC 5 cut(s) 313, 799, 1085, 1762, 1803
LweI GCATC 4 cut(s) 53, 225, 724, 2312
MabI ACCWGGT 1 cut(s) 1482
MaeI CTAG 3 cut(s) 993, 1218, 1562
MaeII ACGT 2 cut(s) 337, 1836
MaeIII GTNAC 3 cut(s) 988, 1695, 2260
MalI GATC 7 cut(s) 942, 1047, 1191, 1680, 1822, 2253, 2388
MboI GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
MfeI CAATTG 1 cut(s) 1332
MflI RGATCY 1 cut(s) 1189
MhlI GDGCHC 4 cut(s) 180, 1742, 1761, 2461
MlsI TGGCCA 1 cut(s) 2172
MluNI TGGCCA 1 cut(s) 2172
MlyI GAGTC 4 cut(s) 71, 247, 1703, 2371
MmeI TCCRAC 3 cut(s) 849, 2017, 2026
Mox20I TGGCCA 1 cut(s) 2172
Mph1103I ATGCAT 1 cut(s) 240
MroXI GAANNNNTTC 4 cut(s) 35, 893, 2184, 2206
MscI TGGCCA 1 cut(s) 2172
MseI TTAA 9 cut(s) 503, 1113, 1185, 1541, 1572, 1683, 2093, 2223, 2418
MslI CAYNNNNRTG 4 cut(s) 226, 581, 1764, 1949
Msp20I TGGCCA 1 cut(s) 2172
MspA1I CMGCKG 1 cut(s) 1816
MspCI CTTAAG 1 cut(s) 1571
MspI CCGG 6 cut(s) 147, 1004, 1031, 1712, 2374, 2535
MspR9I CCNGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
MunI CAATTG 1 cut(s) 1332
MvaI CCWGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
MvnI CGCG 1 cut(s) 588
MwoI GCNNNNNNNGC 4 cut(s) 533, 561, 721, 958
NdeII GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
NlaIII CATG 6 cut(s) 227, 734, 889, 1240, 1877, 2033
NlaIV GGNNCC 4 cut(s) 1029, 1716, 1871, 2341
NmuCI GTSAC 3 cut(s) 988, 1695, 2260
NsiI ATGCAT 1 cut(s) 240
OliI CACNNNNGTG 2 cut(s) 226, 581
PdmI GAANNNNTTC 4 cut(s) 35, 893, 2184, 2206
PfeI GAWTC 3 cut(s) 392, 1770, 2161
PflFI GACNNNGTC 1 cut(s) 61
PfoI TCCNGGA 3 cut(s) 180, 762, 2194
PkrI GCNGC 7 cut(s) 328, 538, 814, 1100, 1216, 1777, 1818
Ple19I CGATCG 1 cut(s) 1823
PleI GAGTC 4 cut(s) 70, 247, 1702, 2371
PpsI GAGTC 4 cut(s) 70, 247, 1702, 2371
PsiI TTATAA 3 cut(s) 381, 1056, 1455
Psp6I CCWGG 6 cut(s) 39, 180, 210, 762, 1482, 2194
PspFI CCCAGC 2 cut(s) 1101, 2548
PspGI CCWGG 6 cut(s) 39, 180, 210, 762, 1482, 2194
PspN4I GGNNCC 4 cut(s) 1029, 1716, 1871, 2341
PspPI GGNCC 5 cut(s) 184, 727, 2008, 2240, 2537
PsrI GAACNNNNNNTAC 2 cut(s) 881, 913
PstNI CAGNNNCTG 3 cut(s) 65, 80, 527
PsuI RGATCY 1 cut(s) 1189
PsyI GACNNNGTC 1 cut(s) 61
PvuI CGATCG 1 cut(s) 1823
RsaI GTAC 8 cut(s) 1029, 1497, 1558, 1716, 1751, 1826, 2087, 2394
RsaNI GTAC 8 cut(s) 1028, 1496, 1557, 1715, 1750, 1825, 2086, 2393
RseI CAYNNNNRTG 4 cut(s) 226, 581, 1764, 1949
SaqAI TTAA 9 cut(s) 503, 1113, 1185, 1541, 1572, 1683, 2093, 2223, 2418
SatI GCNGC 7 cut(s) 327, 537, 813, 1099, 1215, 1776, 1817
Sau3AI GATC 7 cut(s) 940, 1045, 1189, 1678, 1820, 2251, 2386
Sau96I GGNCC 5 cut(s) 184, 727, 2008, 2240, 2537
SchI GAGTC 4 cut(s) 71, 247, 1703, 2371
ScrFI CCNGG 6 cut(s) 41, 182, 212, 764, 1484, 2196
SduI GDGCHC 4 cut(s) 180, 1742, 1761, 2461
SexAI ACCWGGT 1 cut(s) 1482
SfaNI GCATC 4 cut(s) 53, 225, 724, 2312
SfcI CTRYAG 2 cut(s) 126, 441
SinI GGWCC 5 cut(s) 184, 727, 2008, 2240, 2537
SmiMI CAYNNNNRTG 4 cut(s) 226, 581, 1764, 1949
SmlI CTYRAG 4 cut(s) 385, 920, 1076, 1571
SmoI CTYRAG 4 cut(s) 385, 920, 1076, 1571
SpeI ACTAGT 1 cut(s) 992
SspI AATATT 1 cut(s) 2067
SspMI CTAG 3 cut(s) 993, 1218, 1562
StyD4I CCNGG 6 cut(s) 39, 180, 210, 762, 1482, 2194
StyI CCWWGG 1 cut(s) 835
TaaI ACNGT 5 cut(s) 161, 1123, 1263, 1537, 2516
TaiI ACGT 2 cut(s) 340, 1839
TaqI TCGA 7 cut(s) 136, 163, 345, 650, 744, 1742, 2409
TatI WGTACW 1 cut(s) 1495
TauI GCSGC 2 cut(s) 539, 1217
TfiI GAWTC 3 cut(s) 392, 1770, 2161
Tru1I TTAA 9 cut(s) 503, 1113, 1185, 1541, 1572, 1683, 2093, 2223, 2418
Tru9I TTAA 9 cut(s) 503, 1113, 1185, 1541, 1572, 1683, 2093, 2223, 2418
TscAI CASTG 4 cut(s) 1126, 1848, 2180, 2587
TseFI GTSAC 3 cut(s) 988, 1695, 2260
TseI GCWGC 5 cut(s) 326, 812, 1098, 1775, 1816
Tsp45I GTSAC 3 cut(s) 988, 1695, 2260
TspDTI ATGAA 7 cut(s) 326, 374, 902, 1967, 2219, 2299, 2499
TspGWI ACGGA 2 cut(s) 969, 2088
TspRI CASTG 4 cut(s) 1126, 1848, 2180, 2587
Tth111I GACNNNGTC 1 cut(s) 61
Vha464I CTTAAG 1 cut(s) 1571
VpaK11BI GGWCC 5 cut(s) 184, 727, 2008, 2240, 2537
XagI CCTNNNNNAGG 1 cut(s) 2387
XapI RAATTY 8 cut(s) 375, 421, 620, 1457, 1605, 1797, 2206, 2400
XbaI TCTAGA 1 cut(s) 1561
XmiI GTMKAC 2 cut(s) 1204, 1903
XmnI GAANNNNTTC 4 cut(s) 35, 893, 2184, 2206
XspI CTAG 3 cut(s) 993, 1218, 1562
Zsp2I ATGCAT 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.