RLG00000020587

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000202
Physical Location & Seq
Forward (+)
66473517 .. 66475054
1538 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020587

Sequence Viewer

Length: 789 bp
ATGAAGTTCTACTCGGATTTATGTTTTAAACTCCCGGACGGTGAAAAAATTCGGGATCACTTATCACACGGATTGCCCAGGGACTCTGGTGGTACGGTCATTGTCACTACTAGGATGACGGAAGTAGAGCGAGATATGCTTTTTACACCATTAAAATACAGGTGCGGTGAAGGAACACGCTTTGGTAAGTCCAACATGGAAACTGTGAAAAAGGTTCATGATGAGATTCTGCATCAAGTTTGTGGCCTACCATCAATTGCCAAGACTCTGGCAGACTTGATCATTGCAAATCAGATTGGTCAAAATGATTATAATAGGTCTGCCCTGAAGAAGATGTTGATACCTCCTGAAATTCTTATTCAATGTTCATGGGTGACTGTTGCGACAAAAGACAAGAAAGCGAAATGGATTCAGGATAAAACCGAAGTACCAAAATGTCCAATATTTGTGTTTATTGATTTAAGAAGTGACCAAGTAGGAGATCTTGCTGAAGACCTTCGCTTCCAGCTTAATCGTGAGCAGTGGACAAGTACAGAATGCTACAGAGTATGTCAAGGAAAGAAAAATTGCTCGCGAGTGTTCACTTTCGAAACTCGAAAGCTGGCCGGACTGAAGATCATTGCTGTTCTGCACGAGAGTTTCTATAATAAGTATAAATTGTCGACAGTAAACCCAGATAGGGCGCTGACTGCGGTTTATTGTGCTCTAGCAACGCTTAAGGTTGTAGGACATAACTTTGCTAATGAACTTCAAAAGAAGATGACAATTATAGTGAGTGACAATTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

263

Amino Acids

29.84

Weight (kDa)

9.05

Isoelectric Point (pI)

25.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 312
AccI GTMKAC 1 cut(s) 662
AccII CGCG 1 cut(s) 574
AciI CCGC 2 cut(s) 165, 692
AclWI GGATC 1 cut(s) 63
AcoI YGGCCR 1 cut(s) 603
AcsI RAATTY 2 cut(s) 48, 351
AcuI CTGAAG 3 cut(s) 347, 510, 632
AfaI GTAC 3 cut(s) 94, 429, 532
AfiI CCNNNNNNNGG 1 cut(s) 679
AflII CTTAAG 1 cut(s) 716
AgsI TTSAA 2 cut(s) 362, 752
AjnI CCWGG 1 cut(s) 77
AluBI AGCT 2 cut(s) 508, 601
AluI AGCT 2 cut(s) 508, 601
Alw21I GWGCWC 1 cut(s) 706
AlwI GGATC 1 cut(s) 63
AoxI GGCC 2 cut(s) 244, 603
ApoI RAATTY 2 cut(s) 48, 351
Asp700I GAANNNNTTC 2 cut(s) 48, 495
AspLEI GCGC 1 cut(s) 685
AsuC2I CCSGG 1 cut(s) 35
AsuHPI GGTGA 3 cut(s) 53, 179, 385
AsuII TTCGAA 1 cut(s) 588
BaeI ACNNNNGTAYC 2 cut(s) 411, 444
BauI CACGAG 1 cut(s) 632
BbsI GAAGAC 1 cut(s) 498
Bbv12I GWGCWC 1 cut(s) 706
BccI CCATC 1 cut(s) 259
BciT130I CCWGG 1 cut(s) 79
BclI TGATCA 1 cut(s) 279
BcnI CCSGG 1 cut(s) 35
BfaI CTAG 2 cut(s) 111, 707
BfmI CTRYAG 1 cut(s) 541
BfoI RGCGCY 1 cut(s) 686
BfrI CTTAAG 1 cut(s) 716
BglII AGATCT 1 cut(s) 481
Bme1390I CCNGG 2 cut(s) 35, 79
BmrFI CCNGG 2 cut(s) 35, 79
BmsI GCATC 1 cut(s) 241
BpiI GAAGAC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 588
BpuMI CCSGG 1 cut(s) 35
BsaJI CCNNGG 2 cut(s) 77, 78
Bsc4I CCNNNNNNNGG 1 cut(s) 679
Bse3DI GCAATG 2 cut(s) 282, 618
BseBI CCWGG 1 cut(s) 79
BseDI CCNNGG 2 cut(s) 77, 78
BseGI GGATG 1 cut(s) 120
BseLI CCNNNNNNNGG 1 cut(s) 679
BseMI GCAATG 2 cut(s) 282, 618
BsgI GTGCAG 1 cut(s) 614
Bsh1236I CGCG 1 cut(s) 574
BshFI GGCC 2 cut(s) 246, 605
BsiHKAI GWGCWC 1 cut(s) 706
BsiSI CCGG 2 cut(s) 35, 606
BslFI GGGAC 1 cut(s) 95
BslI CCNNNNNNNGG 1 cut(s) 679
BsmFI GGGAC 1 cut(s) 95
BsmI GAATGC 1 cut(s) 542
BsnI GGCC 2 cut(s) 246, 605
Bsp119I TTCGAA 1 cut(s) 588
Bsp1286I GDGCHC 1 cut(s) 706
Bsp143I GATC 4 cut(s) 55, 279, 481, 615
Bsp68I TCGCGA 1 cut(s) 574
BspACI CCGC 2 cut(s) 165, 692
BspANI GGCC 2 cut(s) 246, 605
BspFNI CGCG 1 cut(s) 574
BspHI TCATGA 1 cut(s) 217
BspPI GGATC 1 cut(s) 63
BspT104I TTCGAA 1 cut(s) 588
BspTI CTTAAG 1 cut(s) 716
BsrDI GCAATG 2 cut(s) 282, 618
BssECI CCNNGG 2 cut(s) 77, 78
BssMI GATC 4 cut(s) 55, 279, 481, 615
BssSI CACGAG 1 cut(s) 632
Bst2BI CACGAG 1 cut(s) 632
Bst2UI CCWGG 1 cut(s) 79
Bst4CI ACNGT 5 cut(s) 41, 97, 205, 379, 667
BstAFI CTTAAG 1 cut(s) 716
BstBI TTCGAA 1 cut(s) 588
BstC8I GCNNGC 2 cut(s) 572, 603
BstF5I GGATG 1 cut(s) 120
BstFNI CGCG 1 cut(s) 574
BstH2I RGCGCY 1 cut(s) 686
BstHHI GCGC 1 cut(s) 685
BstKTI GATC 4 cut(s) 58, 282, 484, 618
BstMBI GATC 4 cut(s) 55, 279, 481, 615
BstMWI GCNNNNNNNGC 2 cut(s) 136, 689
BstNI CCWGG 1 cut(s) 79
BstSCI CCNGG 2 cut(s) 33, 77
BstSFI CTRYAG 1 cut(s) 541
BstUI CGCG 1 cut(s) 574
BstV2I GAAGAC 1 cut(s) 498
BstX2I RGATCY 1 cut(s) 481
BstXI CCANNNNNNTGG 1 cut(s) 268
BstYI RGATCY 1 cut(s) 481
BsuRI GGCC 2 cut(s) 246, 605
BtsCI GGATG 1 cut(s) 120
BtsI GCAGTG 1 cut(s) 527
BtsIMutI CAGTG 1 cut(s) 527
BtuMI TCGCGA 1 cut(s) 574
Cac8I GCNNGC 2 cut(s) 572, 603
CciI TCATGA 1 cut(s) 217
CfoI GCGC 1 cut(s) 685
Csp6I GTAC 3 cut(s) 93, 428, 531
CviAII CATG 3 cut(s) 196, 218, 369
CviJI RGCY 4 cut(s) 246, 508, 601, 605
CviKI_1 RGCY 4 cut(s) 246, 508, 601, 605
CviQI GTAC 3 cut(s) 93, 428, 531
DpnI GATC 4 cut(s) 57, 281, 483, 617
DpnII GATC 4 cut(s) 55, 279, 481, 615
DraI TTTAAA 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 603
Eco57I CTGAAG 3 cut(s) 347, 510, 632
EcoRII CCWGG 1 cut(s) 77
FaeI CATG 3 cut(s) 199, 221, 372
FaqI GGGAC 1 cut(s) 95
FatI CATG 3 cut(s) 195, 217, 368
FbaI TGATCA 1 cut(s) 279
FblI GTMKAC 1 cut(s) 662
FokI GGATG 1 cut(s) 127
FspBI CTAG 2 cut(s) 111, 707
GlaI GCGC 1 cut(s) 684
HaeII RGCGCY 1 cut(s) 686
HaeIII GGCC 2 cut(s) 246, 605
HapII CCGG 2 cut(s) 35, 606
HhaI GCGC 1 cut(s) 685
Hin1II CATG 3 cut(s) 199, 221, 372
Hin6I GCGC 1 cut(s) 683
HinP1I GCGC 1 cut(s) 683
HincII GTYRAC 1 cut(s) 663
HindII GTYRAC 1 cut(s) 663
HinfI GANTC 4 cut(s) 83, 226, 265, 409
HpaII CCGG 2 cut(s) 35, 606
HphI GGTGA 3 cut(s) 53, 179, 385
Hpy166II GTNNAC 4 cut(s) 525, 582, 663, 670
Hpy188I TCNGA 2 cut(s) 16, 294
Hpy188III TCNNGA 6 cut(s) 53, 218, 347, 413, 515, 573
Hpy8I GTNNAC 4 cut(s) 525, 582, 663, 670
HpyAV CCTTC 2 cut(s) 164, 506
HpyCH4III ACNGT 5 cut(s) 41, 97, 205, 379, 667
HpyCH4V TGCA 3 cut(s) 232, 287, 631
HpyF10VI GCNNNNNNNGC 2 cut(s) 136, 689
Hsp92II CATG 3 cut(s) 199, 221, 372
HspAI GCGC 1 cut(s) 683
Ksp22I TGATCA 1 cut(s) 279
Kzo9I GATC 4 cut(s) 55, 279, 481, 615
LweI GCATC 1 cut(s) 241
MaeI CTAG 2 cut(s) 111, 707
MaeIII GTNAC 4 cut(s) 103, 373, 467, 776
MalI GATC 4 cut(s) 57, 281, 483, 617
MboI GATC 4 cut(s) 55, 279, 481, 615
MboII GAAGA 5 cut(s) 340, 343, 503, 625, 769
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 1 cut(s) 706
MluCI AATT 7 cut(s) 48, 255, 351, 565, 656, 765, 781
MlyI GAGTC 2 cut(s) 77, 259
MmeI TCCRAC 1 cut(s) 216
MnlI CCTC 1 cut(s) 354
MroXI GAANNNNTTC 2 cut(s) 48, 495
MseI TTAA 5 cut(s) 27, 152, 461, 510, 717
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 2 cut(s) 35, 606
MspR9I CCNGG 2 cut(s) 35, 79
MunI CAATTG 1 cut(s) 255
Mva1269I GAATGC 1 cut(s) 542
MvaI CCWGG 1 cut(s) 79
MvnI CGCG 1 cut(s) 574
MwoI GCNNNNNNNGC 2 cut(s) 136, 689
NciI CCSGG 1 cut(s) 35
NdeII GATC 4 cut(s) 55, 279, 481, 615
NlaIII CATG 3 cut(s) 199, 221, 372
NmuCI GTSAC 4 cut(s) 103, 373, 467, 776
NruI TCGCGA 1 cut(s) 574
NspV TTCGAA 1 cut(s) 588
PagI TCATGA 1 cut(s) 217
PasI CCCWGGG 1 cut(s) 78
PctI GAATGC 1 cut(s) 542
PdmI GAANNNNTTC 2 cut(s) 48, 495
PfeI GAWTC 2 cut(s) 226, 409
PfoI TCCNGGA 1 cut(s) 33
PleI GAGTC 2 cut(s) 77, 259
PpsI GAGTC 2 cut(s) 77, 259
PsiI TTATAA 1 cut(s) 312
Psp6I CCWGG 1 cut(s) 77
PspGI CCWGG 1 cut(s) 77
PsuI RGATCY 1 cut(s) 481
RruI TCGCGA 1 cut(s) 574
RsaI GTAC 3 cut(s) 94, 429, 532
RsaNI GTAC 3 cut(s) 93, 428, 531
SalI GTCGAC 1 cut(s) 661
SaqAI TTAA 5 cut(s) 27, 152, 461, 510, 717
Sau3AI GATC 4 cut(s) 55, 279, 481, 615
SchI GAGTC 2 cut(s) 77, 259
ScrFI CCNGG 2 cut(s) 35, 79
SduI GDGCHC 1 cut(s) 706
SetI ASST 8 cut(s) 164, 216, 320, 346, 498, 510, 603, 723
SfaNI GCATC 1 cut(s) 241
SfcI CTRYAG 1 cut(s) 541
SfuI TTCGAA 1 cut(s) 588
SmlI CTYRAG 1 cut(s) 716
SmoI CTYRAG 1 cut(s) 716
Sse9I AATT 7 cut(s) 48, 255, 351, 565, 656, 765, 781
SsiI CCGC 2 cut(s) 165, 692
SspI AATATT 1 cut(s) 444
SspMI CTAG 2 cut(s) 111, 707
StyD4I CCNGG 2 cut(s) 33, 77
TaaI ACNGT 5 cut(s) 41, 97, 205, 379, 667
TaqI TCGA 3 cut(s) 588, 595, 662
TasI AATT 7 cut(s) 48, 255, 351, 565, 656, 765, 781
TatI WGTACW 1 cut(s) 530
TfiI GAWTC 2 cut(s) 226, 409
Tru1I TTAA 5 cut(s) 27, 152, 461, 510, 717
Tru9I TTAA 5 cut(s) 27, 152, 461, 510, 717
TscAI CASTG 1 cut(s) 527
TseFI GTSAC 4 cut(s) 103, 373, 467, 776
Tsp45I GTSAC 4 cut(s) 103, 373, 467, 776
TspDTI ATGAA 4 cut(s) 17, 206, 357, 759
TspGWI ACGGA 2 cut(s) 84, 134
TspRI CASTG 1 cut(s) 527
Vha464I CTTAAG 1 cut(s) 716
XapI RAATTY 2 cut(s) 48, 351
XmiI GTMKAC 1 cut(s) 662
XmnI GAANNNNTTC 2 cut(s) 48, 495
XspI CTAG 2 cut(s) 111, 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.