Rh7CG427400

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000202
Physical Location & Seq
Forward (+)
55745895 .. 55750106
4212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG427400.1

Sequence Viewer

Length: 294 bp
ATGGAGAAGCTTCTTAATCCATATGATAAGGCATCAGCATTACCATTTCAAAGCATGAAAAAAGCATTCAAGGAGAAGGCGAGTGCGATGGCATTAGATGTTGCTGAATTGCTGTGGAGCAAGTTCTCGAAGTCTCTGGCAGAGCTAGACTCTGAATCTAATTCAGGTTCTATTACCATCTCTGTCTTCAAATCATCAATAAAAGCTCTCGTGTCTGATTTCGAAGCAATCAAAGATGTTGTGAATGAGAGAGACATAATGCCGGAACCTTATACCCAACGATGCATTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

97

Amino Acids

10.77

Weight (kDa)

5.42

Isoelectric Point (pI)

31.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 3 cut(s) 50, 70, 190
AluBI AGCT 3 cut(s) 10, 145, 206
AluI AGCT 3 cut(s) 10, 145, 206
Alw26I GTCTC 2 cut(s) 138, 246
AsuII TTCGAA 1 cut(s) 222
BauI CACGAG 1 cut(s) 209
BbsI GAAGAC 1 cut(s) 178
BccI CCATC 2 cut(s) 82, 185
BcoDI GTCTC 2 cut(s) 138, 246
BfaI CTAG 1 cut(s) 146
BmiI GGNNCC 1 cut(s) 267
BmsI GCATC 2 cut(s) 41, 272
BpiI GAAGAC 1 cut(s) 178
BplI GAGNNNNNCTC 2 cut(s) 134, 166
Bpu14I TTCGAA 1 cut(s) 222
BsiSI CCGG 1 cut(s) 263
BsmAI GTCTC 2 cut(s) 138, 246
BsmI GAATGC 1 cut(s) 65
Bsp119I TTCGAA 1 cut(s) 222
BspLI GGNNCC 1 cut(s) 267
BspT104I TTCGAA 1 cut(s) 222
BssSI CACGAG 1 cut(s) 209
Bst2BI CACGAG 1 cut(s) 209
BstBI TTCGAA 1 cut(s) 222
BstMAI GTCTC 2 cut(s) 138, 246
BstV2I GAAGAC 1 cut(s) 178
BtgZI GCGATG 1 cut(s) 101
CviAII CATG 1 cut(s) 55
CviJI RGCY 4 cut(s) 10, 145, 206, 291
CviKI_1 RGCY 4 cut(s) 10, 145, 206, 291
EcoT22I ATGCAT 1 cut(s) 287
FaeI CATG 1 cut(s) 58
FaiI YATR 5 cut(s) 22, 24, 56, 257, 273
FatI CATG 1 cut(s) 54
FauNDI CATATG 1 cut(s) 22
FspBI CTAG 1 cut(s) 146
HapII CCGG 1 cut(s) 263
Hin1II CATG 1 cut(s) 58
HindIII AAGCTT 1 cut(s) 8
HinfI GANTC 2 cut(s) 149, 155
HpaII CCGG 1 cut(s) 263
Hpy188I TCNGA 2 cut(s) 154, 217
Hpy188III TCNNGA 1 cut(s) 127
HpyAV CCTTC 1 cut(s) 70
HpyCH4V TGCA 1 cut(s) 285
Hsp92II CATG 1 cut(s) 58
LmnI GCTCC 1 cut(s) 117
LpnPI CCDG 3 cut(s) 122, 150, 276
LweI GCATC 2 cut(s) 41, 272
MaeI CTAG 1 cut(s) 146
MboII GAAGA 1 cut(s) 178
MluCI AATT 2 cut(s) 107, 160
MlyI GAGTC 1 cut(s) 143
Mph1103I ATGCAT 1 cut(s) 287
MseI TTAA 1 cut(s) 15
MspI CCGG 1 cut(s) 263
Mva1269I GAATGC 1 cut(s) 65
NdeI CATATG 1 cut(s) 22
NlaIII CATG 1 cut(s) 58
NlaIV GGNNCC 1 cut(s) 267
NsiI ATGCAT 1 cut(s) 287
NspV TTCGAA 1 cut(s) 222
PctI GAATGC 1 cut(s) 65
PfeI GAWTC 1 cut(s) 155
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
PspN4I GGNNCC 1 cut(s) 267
SaqAI TTAA 1 cut(s) 15
SchI GAGTC 1 cut(s) 143
SetI ASST 5 cut(s) 12, 147, 169, 208, 271
SfaNI GCATC 2 cut(s) 41, 272
SfuI TTCGAA 1 cut(s) 222
Sse9I AATT 2 cut(s) 107, 160
SspMI CTAG 1 cut(s) 146
TaqI TCGA 2 cut(s) 128, 222
TasI AATT 2 cut(s) 107, 160
TfiI GAWTC 1 cut(s) 155
Tru1I TTAA 1 cut(s) 15
Tru9I TTAA 1 cut(s) 15
TspDTI ATGAA 1 cut(s) 71
XcmI CCANNNNNNNNNTGG 1 cut(s) 284
XspI CTAG 1 cut(s) 146
Zsp2I ATGCAT 1 cut(s) 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.