Prupe.3G176000_v2.0.a1

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000202
Physical Location & Seq
Forward (+)
19314691 .. 19320705
6015 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G176000.1

Sequence Viewer

Length: 984 bp
ATGAGAATTATAGTTGTTGGCGGAGATGATGTTATAAATTGGATTTTGGGAGTTATCTGTGATCTTAAATTGCCAGAGTCACCCTCCATTGCTCCGGTACCACCACCGACATTATTAAAAGTATGGCGCTTGTCCTACGACCACTACCAATATGGAATCGCTGCTTCGTTTGGATGGAAGGACATTTCAAATTTATCATCGCTGAGACCATTTCTTGTTGACGTAGCACTGGCAAAAACGTGTAGGACTGACAGCTGGCATTGTTTCATTAGGATGAAACACACTCAATCTTCTACAAGTCAACAACAAAAACCACATTCTTCTTTTACGGACCGATTGCCACATTATTTGCATGAGGTTAGAGATGTGGGAAAAGCGGATATTCCAACATTATACGGACGATTTTGGTACTACTTCATGTTGACTGCGCACGACCCTTGGGGTGACAGCGATGACCTAACCTCAGTTGCAATAATAAAGGTGTTGAATCATCTTGGACAGTGGAAAGTGCTTCACATTCCTGGATGCACCATCAATTCAATTTGTTGTCTTAACACCCCTATCTTTCGTCCAAGAGAAGATCGTTGGTTCACAAACAATACTTGGGATTATGGAAAAACACCTAAGAACCCATCTTTCATAGACGATGGACGCCTCGAAGTTATCGGTTCCGTATTTCAATTTATGGACAGGAGCAGAAAATGGACTCTCCTTGATCAGGTACAAGGAATTCGCTTCGAGTTTATTAAGGGTGCAGAAGGGCATGCAAGGTGGTCTGTGGACATAAGTATTGATGGAGCACCAGAGTTTGATATCCCTGCTGTTGAATTGGTTGAGATTGAAATCTCTTACCAAGGTCAAGTCAACATTCTTGCCGGTCCAAATTGCGAAGCAAGAAGTATCCATCACTCCAAATTGCCGGTCCAAATTGAGATGGAAAAATTGCACAGCGTTCAGATACCTGAGGCCAATCTAGAGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

328

Amino Acids

37.38

Weight (kDa)

6.15

Isoelectric Point (pI)

39.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 35
Acc16I TGCGCA 1 cut(s) 429
Acc65I GGTACC 1 cut(s) 97
AccB1I GGYRCC 1 cut(s) 97
AciI CCGC 2 cut(s) 21, 377
AcsI RAATTY 2 cut(s) 190, 729
AcyI GRCGYC 1 cut(s) 652
AfaI GTAC 3 cut(s) 99, 410, 723
AfiI CCNNNNNNNGG 1 cut(s) 718
AflIII ACRYGT 1 cut(s) 239
AgsI TTSAA 6 cut(s) 189, 487, 540, 680, 827, 842
AjnI CCWGG 1 cut(s) 520
AluBI AGCT 1 cut(s) 255
AluI AGCT 1 cut(s) 255
Alw21I GWGCWC 2 cut(s) 802, 981
Alw26I GTCTC 1 cut(s) 199
AoxI GGCC 1 cut(s) 966
ApeKI GCWGC 1 cut(s) 161
ApoI RAATTY 2 cut(s) 190, 729
ArsI GACNNNNNNTTYG 2 cut(s) 906, 938
Asp718I GGTACC 1 cut(s) 97
AspLEI GCGC 2 cut(s) 129, 430
AspS9I GGNCC 3 cut(s) 331, 878, 922
AsuHPI GGTGA 2 cut(s) 72, 455
AvaII GGWCC 3 cut(s) 331, 878, 922
AxyI CCTNAGG 1 cut(s) 963
BanI GGYRCC 1 cut(s) 97
Bbv12I GWGCWC 2 cut(s) 802, 981
BbvI GCAGC 1 cut(s) 148
BccI CCATC 7 cut(s) 168, 539, 640, 641, 788, 912, 928
BciT130I CCWGG 1 cut(s) 522
BciVI GTATCC 1 cut(s) 911
BclI TGATCA 1 cut(s) 715
BcoDI GTCTC 1 cut(s) 199
BfaI CTAG 1 cut(s) 974
BfoI RGCGCY 1 cut(s) 130
BfuI GTATCC 1 cut(s) 911
BisI GCNGC 1 cut(s) 162
BlsI GCNGC 1 cut(s) 163
Bme1390I CCNGG 1 cut(s) 522
Bme18I GGWCC 3 cut(s) 331, 878, 922
BmgT120I GGNCC 3 cut(s) 331, 878, 922
BmiI GGNNCC 2 cut(s) 99, 670
BmrFI CCNGG 1 cut(s) 522
BmsI GCATC 1 cut(s) 515
BplI GAGNNNNNCTC 2 cut(s) 68, 100
BsaBI GATNNNNATC 1 cut(s) 842
BsaHI GRCGYC 1 cut(s) 652
BsaI GGTCTC 1 cut(s) 199
BsaJI CCNNGG 2 cut(s) 437, 853
BsaWI WCCGGW 1 cut(s) 94
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 1 cut(s) 718
Bse118I RCCGGY 2 cut(s) 875, 919
Bse1I ACTGG 1 cut(s) 234
Bse21I CCTNAGG 1 cut(s) 963
Bse3DI GCAATG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 842
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 2 cut(s) 437, 853
BseGI GGATG 3 cut(s) 179, 279, 530
BseJI GATNNNNATC 1 cut(s) 842
BseLI CCNNNNNNNGG 1 cut(s) 718
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 3 cut(s) 194, 477, 954
BseNI ACTGG 1 cut(s) 234
BseXI GCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 774
BshFI GGCC 1 cut(s) 968
BshNI GGYRCC 1 cut(s) 97
BsiHKAI GWGCWC 2 cut(s) 802, 981
BsiSI CCGG 3 cut(s) 95, 876, 920
BslI CCNNNNNNNGG 1 cut(s) 718
BsmAI GTCTC 1 cut(s) 199
BsnI GGCC 1 cut(s) 968
Bso31I GGTCTC 1 cut(s) 199
Bsp1286I GDGCHC 2 cut(s) 802, 981
Bsp143I GATC 3 cut(s) 61, 580, 715
BspACI CCGC 2 cut(s) 21, 377
BspANI GGCC 1 cut(s) 968
BspCNI CTCAG 3 cut(s) 195, 476, 955
BspLI GGNNCC 2 cut(s) 99, 670
BspT107I GGYRCC 1 cut(s) 97
BspTNI GGTCTC 1 cut(s) 199
BsrDI GCAATG 1 cut(s) 87
BsrFI RCCGGY 2 cut(s) 875, 919
BsrI ACTGG 1 cut(s) 234
BssAI RCCGGY 2 cut(s) 875, 919
BssECI CCNNGG 2 cut(s) 437, 853
BssMI GATC 3 cut(s) 61, 580, 715
BssNI GRCGYC 1 cut(s) 652
BssT1I CCWWGG 2 cut(s) 437, 853
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 1 cut(s) 501
BstACI GRCGYC 1 cut(s) 652
BstC8I GCNNGC 2 cut(s) 257, 765
BstDEI CTNAG 4 cut(s) 203, 463, 624, 963
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 3 cut(s) 179, 279, 530
BstH2I RGCGCY 1 cut(s) 130
BstHHI GCGC 2 cut(s) 129, 430
BstKTI GATC 3 cut(s) 64, 583, 718
BstMAI GTCTC 1 cut(s) 199
BstMBI GATC 3 cut(s) 61, 580, 715
BstNI CCWGG 1 cut(s) 522
BstNSI RCATGY 1 cut(s) 767
BstSCI CCNGG 1 cut(s) 520
BstV1I GCAGC 1 cut(s) 148
Bsu36I CCTNAGG 1 cut(s) 963
BsuI GTATCC 1 cut(s) 911
BsuRI GGCC 1 cut(s) 968
BtgZI GCGATG 2 cut(s) 183, 465
BtsCI GGATG 3 cut(s) 179, 279, 530
BtsIMutI CAGTG 3 cut(s) 227, 506, 979
Cac8I GCNNGC 2 cut(s) 257, 765
CfoI GCGC 2 cut(s) 129, 430
Cfr10I RCCGGY 2 cut(s) 875, 919
Cfr13I GGNCC 3 cut(s) 331, 878, 922
CpoI CGGWCCG 1 cut(s) 331
CseI GACGC 1 cut(s) 660
Csp6I GTAC 3 cut(s) 98, 409, 722
CspCI CAANNNNNGTGG 2 cut(s) 330, 365
CspI CGGWCCG 1 cut(s) 331
CviAII CATG 3 cut(s) 353, 418, 764
CviJI RGCY 2 cut(s) 255, 968
CviKI_1 RGCY 2 cut(s) 255, 968
CviQI GTAC 3 cut(s) 98, 409, 722
DdeI CTNAG 4 cut(s) 203, 463, 624, 963
DpnI GATC 3 cut(s) 63, 582, 717
DpnII GATC 3 cut(s) 61, 580, 715
EciI GGCGGA 1 cut(s) 36
Eco130I CCWWGG 2 cut(s) 437, 853
Eco31I GGTCTC 1 cut(s) 199
Eco32I GATATC 1 cut(s) 814
Eco47I GGWCC 3 cut(s) 331, 878, 922
Eco81I CCTNAGG 1 cut(s) 963
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoRI GAATTC 1 cut(s) 729
EcoRII CCWGG 1 cut(s) 520
EcoRV GATATC 1 cut(s) 814
EcoT14I CCWWGG 2 cut(s) 437, 853
ErhI CCWWGG 2 cut(s) 437, 853
FaeI CATG 3 cut(s) 356, 421, 767
FatI CATG 3 cut(s) 352, 417, 763
FbaI TGATCA 1 cut(s) 715
Fnu4HI GCNGC 1 cut(s) 162
FokI GGATG 3 cut(s) 186, 286, 537
Fsp4HI GCNGC 1 cut(s) 162
FspBI CTAG 1 cut(s) 974
FspI TGCGCA 1 cut(s) 429
GlaI GCGC 2 cut(s) 128, 429
GluI GCNGC 1 cut(s) 162
HaeII RGCGCY 1 cut(s) 130
HaeIII GGCC 1 cut(s) 968
HapII CCGG 3 cut(s) 95, 876, 920
HgaI GACGC 1 cut(s) 660
HhaI GCGC 2 cut(s) 129, 430
Hin1I GRCGYC 1 cut(s) 652
Hin1II CATG 3 cut(s) 356, 421, 767
Hin6I GCGC 2 cut(s) 127, 428
HinP1I GCGC 2 cut(s) 127, 428
HincII GTYRAC 4 cut(s) 220, 302, 423, 865
HindII GTYRAC 4 cut(s) 220, 302, 423, 865
HinfI GANTC 4 cut(s) 77, 156, 487, 706
HpaII CCGG 3 cut(s) 95, 876, 920
HphI GGTGA 2 cut(s) 72, 455
Hpy166II GTNNAC 6 cut(s) 220, 302, 423, 591, 781, 865
Hpy188I TCNGA 1 cut(s) 957
Hpy188III TCNNGA 1 cut(s) 974
Hpy8I GTNNAC 6 cut(s) 220, 302, 423, 591, 781, 865
HpyAV CCTTC 2 cut(s) 172, 752
HpyCH4III ACNGT 1 cut(s) 501
HpyCH4IV ACGT 2 cut(s) 222, 239
HpyCH4V TGCA 6 cut(s) 352, 470, 528, 755, 767, 946
HpyF3I CTNAG 4 cut(s) 203, 463, 624, 963
HpySE526I ACGT 2 cut(s) 222, 239
Hsp92I GRCGYC 1 cut(s) 652
Hsp92II CATG 3 cut(s) 356, 421, 767
HspAI GCGC 2 cut(s) 127, 428
KpnI GGTACC 1 cut(s) 101
Ksp22I TGATCA 1 cut(s) 715
Kzo9I GATC 3 cut(s) 61, 580, 715
LmnI GCTCC 3 cut(s) 97, 693, 797
Lsp1109I GCAGC 1 cut(s) 148
LweI GCATC 1 cut(s) 515
MaeI CTAG 1 cut(s) 974
MaeII ACGT 2 cut(s) 222, 239
MaeIII GTNAC 2 cut(s) 78, 443
MalI GATC 3 cut(s) 63, 582, 717
MboI GATC 3 cut(s) 61, 580, 715
MboII GAAGA 3 cut(s) 282, 312, 590
MhlI GDGCHC 2 cut(s) 802, 981
MlyI GAGTC 2 cut(s) 86, 700
MmeI TCCRAC 1 cut(s) 410
MnlI CCTC 5 cut(s) 94, 349, 472, 665, 958
MseI TTAA 4 cut(s) 66, 116, 552, 747
MslI CAYNNNNRTG 1 cut(s) 272
MspA1I CMGCKG 1 cut(s) 255
MspI CCGG 3 cut(s) 95, 876, 920
MspR9I CCNGG 1 cut(s) 522
MvaI CCWGG 1 cut(s) 522
NdeII GATC 3 cut(s) 61, 580, 715
NlaIII CATG 3 cut(s) 356, 421, 767
NlaIV GGNNCC 2 cut(s) 99, 670
NmuCI GTSAC 2 cut(s) 78, 443
NsbI TGCGCA 1 cut(s) 429
NspI RCATGY 1 cut(s) 767
PaeI GCATGC 1 cut(s) 767
PfeI GAWTC 2 cut(s) 156, 487
PfoI TCCNGGA 1 cut(s) 520
PkrI GCNGC 1 cut(s) 163
PleI GAGTC 2 cut(s) 85, 700
PpsI GAGTC 2 cut(s) 85, 700
PsiI TTATAA 1 cut(s) 35
Psp6I CCWGG 1 cut(s) 520
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 2 cut(s) 99, 670
PspPI GGNCC 3 cut(s) 331, 878, 922
PvuII CAGCTG 1 cut(s) 255
RsaI GTAC 3 cut(s) 99, 410, 723
RsaNI GTAC 3 cut(s) 98, 409, 722
RseI CAYNNNNRTG 1 cut(s) 272
Rsr2I CGGWCCG 1 cut(s) 331
RsrII CGGWCCG 1 cut(s) 331
SaqAI TTAA 4 cut(s) 66, 116, 552, 747
SatI GCNGC 1 cut(s) 162
Sau3AI GATC 3 cut(s) 61, 580, 715
Sau96I GGNCC 3 cut(s) 331, 878, 922
SchI GAGTC 2 cut(s) 86, 700
ScrFI CCNGG 1 cut(s) 522
SduI GDGCHC 2 cut(s) 802, 981
SfaNI GCATC 1 cut(s) 515
SinI GGWCC 3 cut(s) 331, 878, 922
SmiMI CAYNNNNRTG 1 cut(s) 272
SphI GCATGC 1 cut(s) 767
SsiI CCGC 2 cut(s) 21, 377
SspMI CTAG 1 cut(s) 974
StyD4I CCNGG 1 cut(s) 520
StyI CCWWGG 2 cut(s) 437, 853
TaaI ACNGT 1 cut(s) 501
TaiI ACGT 2 cut(s) 225, 242
TaqI TCGA 2 cut(s) 657, 738
TaqII GACCGA 1 cut(s) 348
TfiI GAWTC 2 cut(s) 156, 487
Tru1I TTAA 4 cut(s) 66, 116, 552, 747
Tru9I TTAA 4 cut(s) 66, 116, 552, 747
TscAI CASTG 2 cut(s) 234, 506
TseFI GTSAC 2 cut(s) 78, 443
TseI GCWGC 1 cut(s) 161
Tsp45I GTSAC 2 cut(s) 78, 443
TspDTI ATGAA 4 cut(s) 256, 290, 406, 628
TspGWI ACGGA 3 cut(s) 344, 411, 661
TspRI CASTG 2 cut(s) 234, 506
VpaK11BI GGWCC 3 cut(s) 331, 878, 922
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 2 cut(s) 190, 729
XbaI TCTAGA 1 cut(s) 973
XceI RCATGY 1 cut(s) 767
XcmI CCANNNNNNNNNTGG 1 cut(s) 149
XspI CTAG 1 cut(s) 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.