Prupe.8G030500_v2.0.a1

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000202
Physical Location & Seq
Reverse (-)
2881621 .. 2883405
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G030500.1

Sequence Viewer

Length: 450 bp
ATGAGTTCCTGGCATCTCTTAGGGAGACAGGCAATTGATGCATCTCTCTATTTAATTTATGCATGTTGCCTGCTTGACTACTTTCAGAAGGACATCTCGAATATATCACCGCTGCAATCGTTTCTTGTTGACGTAGCATTGGCAAAACCGTTGAGAACTGACAGCTGGCATTGTCTCATTAGGATGAAACGCACTCAGTCTTCTACAGGAAAACCTTATGCTTTTTGTATGGACCCATTACCACATTGTTTGCATGAGGTTGGAGATGTGGAAAAAGCAGATAATCCAACATTTTACGGACGATTTTGTTACTACTTCATCTTGAGAGGTAAAGAATTTCATCCTTGTTTATACTTTAATTTCTTTTCTTCGTTATGTGCCCAAATTCATTCGAATTTTTTTTATACTCCTGTTATCATTTCATTTCCATATTTTTTATGCATTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

150

Amino Acids

17.37

Weight (kDa)

7.56

Isoelectric Point (pI)

56.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 110
AcsI RAATTY 3 cut(s) 335, 384, 394
AjnI CCWGG 1 cut(s) 8
AluBI AGCT 1 cut(s) 165
AluI AGCT 1 cut(s) 165
Alw26I GTCTC 2 cut(s) 19, 179
ApeKI GCWGC 1 cut(s) 112
ApoI RAATTY 3 cut(s) 335, 384, 394
AseI ATTAAT 1 cut(s) 444
AspS9I GGNCC 1 cut(s) 232
AsuHPI GGTGA 1 cut(s) 99
AsuII TTCGAA 1 cut(s) 392
AvaII GGWCC 1 cut(s) 232
BaeGI GKGCMC 1 cut(s) 382
BbsI GAAGAC 1 cut(s) 192
BbvI GCAGC 1 cut(s) 99
BciT130I CCWGG 1 cut(s) 10
BcoDI GTCTC 2 cut(s) 19, 179
BfmI CTRYAG 1 cut(s) 204
BisI GCNGC 1 cut(s) 113
BlsI GCNGC 1 cut(s) 114
Bme1390I CCNGG 1 cut(s) 10
Bme18I GGWCC 1 cut(s) 232
BmgT120I GGNCC 1 cut(s) 232
BmiI GGNNCC 1 cut(s) 234
BmrFI CCNGG 1 cut(s) 10
BmsI GCATC 3 cut(s) 22, 28, 50
BpiI GAAGAC 1 cut(s) 192
Bpu14I TTCGAA 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 343
BseBI CCWGG 1 cut(s) 10
BseGI GGATG 2 cut(s) 189, 340
BseMII CTCAG 1 cut(s) 209
BseSI GKGCMC 1 cut(s) 382
BseXI GCAGC 1 cut(s) 99
BsmAI GTCTC 2 cut(s) 19, 179
Bsp119I TTCGAA 1 cut(s) 392
Bsp1286I GDGCHC 1 cut(s) 382
BspACI CCGC 1 cut(s) 110
BspCNI CTCAG 1 cut(s) 208
BspLI GGNNCC 1 cut(s) 234
BspT104I TTCGAA 1 cut(s) 392
Bst2UI CCWGG 1 cut(s) 10
Bst4CI ACNGT 1 cut(s) 150
BstAPI GCANNNNNTGC 1 cut(s) 38
BstBI TTCGAA 1 cut(s) 392
BstC8I GCNNGC 2 cut(s) 71, 167
BstDEI CTNAG 2 cut(s) 19, 195
BstF5I GGATG 2 cut(s) 189, 340
BstMAI GTCTC 2 cut(s) 19, 179
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstNI CCWGG 1 cut(s) 10
BstNSI RCATGY 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 8
BstSFI CTRYAG 1 cut(s) 204
BstSLI GKGCMC 1 cut(s) 382
BstV1I GCAGC 1 cut(s) 99
BstV2I GAAGAC 1 cut(s) 192
BtsCI GGATG 2 cut(s) 189, 340
Cac8I GCNNGC 2 cut(s) 71, 167
Cfr13I GGNCC 1 cut(s) 232
CspCI CAANNNNNGTGG 2 cut(s) 231, 266
CviAII CATG 2 cut(s) 63, 254
CviJI RGCY 1 cut(s) 165
CviKI_1 RGCY 1 cut(s) 165
DdeI CTNAG 2 cut(s) 19, 195
Eco47I GGWCC 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 8
EcoT22I ATGCAT 3 cut(s) 43, 64, 443
FaeI CATG 2 cut(s) 66, 257
FatI CATG 2 cut(s) 62, 253
Fnu4HI GCNGC 1 cut(s) 113
FokI GGATG 2 cut(s) 196, 327
Fsp4HI GCNGC 1 cut(s) 113
GluI GCNGC 1 cut(s) 113
Hin1II CATG 2 cut(s) 66, 257
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HphI GGTGA 1 cut(s) 99
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 87
Hpy188III TCNNGA 2 cut(s) 97, 322
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 1 cut(s) 82
HpyCH4III ACNGT 1 cut(s) 150
HpyCH4IV ACGT 1 cut(s) 132
HpyCH4V TGCA 5 cut(s) 41, 62, 115, 253, 441
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
HpyF3I CTNAG 2 cut(s) 19, 195
HpySE526I ACGT 1 cut(s) 132
Hsp92II CATG 2 cut(s) 66, 257
LpnPI CCDG 6 cut(s) 14, 22, 83, 151, 192, 423
Lsp1109I GCAGC 1 cut(s) 99
LweI GCATC 3 cut(s) 22, 28, 50
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 1 cut(s) 308
MboII GAAGA 2 cut(s) 192, 360
MfeI CAATTG 1 cut(s) 33
MhlI GDGCHC 1 cut(s) 382
MluCI AATT 7 cut(s) 33, 54, 335, 358, 384, 394, 445
MmeI TCCRAC 2 cut(s) 241, 311
MnlI CCTC 2 cut(s) 250, 320
Mph1103I ATGCAT 3 cut(s) 43, 64, 443
MseI TTAA 4 cut(s) 53, 357, 444, 448
MslI CAYNNNNRTG 1 cut(s) 182
MspA1I CMGCKG 2 cut(s) 112, 165
MspR9I CCNGG 1 cut(s) 10
MunI CAATTG 1 cut(s) 33
MvaI CCWGG 1 cut(s) 10
MwoI GCNNNNNNNGC 1 cut(s) 38
NlaIII CATG 2 cut(s) 66, 257
NlaIV GGNNCC 1 cut(s) 234
NsiI ATGCAT 3 cut(s) 43, 64, 443
NspI RCATGY 1 cut(s) 66
NspV TTCGAA 1 cut(s) 392
PacI TTAATTAA 1 cut(s) 448
PkrI GCNGC 1 cut(s) 114
PshBI ATTAAT 1 cut(s) 444
Psp6I CCWGG 1 cut(s) 8
PspGI CCWGG 1 cut(s) 8
PspN4I GGNNCC 1 cut(s) 234
PspPI GGNCC 1 cut(s) 232
PvuII CAGCTG 1 cut(s) 165
RseI CAYNNNNRTG 1 cut(s) 182
SaqAI TTAA 4 cut(s) 53, 357, 444, 448
SatI GCNGC 1 cut(s) 113
Sau96I GGNCC 1 cut(s) 232
ScrFI CCNGG 1 cut(s) 10
SduI GDGCHC 1 cut(s) 382
SetI ASST 5 cut(s) 135, 167, 217, 261, 331
SfaNI GCATC 3 cut(s) 22, 28, 50
SfcI CTRYAG 1 cut(s) 204
SfuI TTCGAA 1 cut(s) 392
SinI GGWCC 1 cut(s) 232
SmiMI CAYNNNNRTG 1 cut(s) 182
SmlI CTYRAG 1 cut(s) 322
SmoI CTYRAG 1 cut(s) 322
Sse9I AATT 7 cut(s) 33, 54, 335, 358, 384, 394, 445
SsiI CCGC 1 cut(s) 110
StyD4I CCNGG 1 cut(s) 8
TaaI ACNGT 1 cut(s) 150
TaiI ACGT 1 cut(s) 135
TaqI TCGA 2 cut(s) 98, 392
TasI AATT 7 cut(s) 33, 54, 335, 358, 384, 394, 445
Tru1I TTAA 4 cut(s) 53, 357, 444, 448
Tru9I TTAA 4 cut(s) 53, 357, 444, 448
TseI GCWGC 1 cut(s) 112
TspDTI ATGAA 5 cut(s) 200, 307, 329, 377, 411
TspGWI ACGGA 1 cut(s) 312
VpaK11BI GGWCC 1 cut(s) 232
VspI ATTAAT 1 cut(s) 444
XapI RAATTY 3 cut(s) 335, 384, 394
XceI RCATGY 1 cut(s) 66
Zsp2I ATGCAT 3 cut(s) 43, 64, 443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.