Prupe.3G175800_v2.0.a1

NB-ARC domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000202
Physical Location & Seq
Forward (+)
19278817 .. 19286059
7243 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G175800.2

Sequence Viewer

Length: 2502 bp
ATGGCTGGGGATGTTGCTCAATTTCTCCAGAAAAAGTTCCTGGCATCTCTTAGGGACACAGAGTTTGAATTATCAGGTGCTGTTCTCATTTCTTACTTGCGAGCAATCAAAGATATTGTAATAGATATAGATACGCGAAGACTTACGAAAGATTACTGCCGTCGCTTTATCTATGTGCTCCTGGACCTCACCGACGCATTCACCAAGTGCCAGGTCTTCTCACATGAGTGGAAGAAGCATAGTCATCACAGGACTCATTTAGTAGTCTTCAACCATTTGAGTTTGAGGAAGATTTGTTTCGTGCGGAAGATGAAGAAGCGGCTGGCTGCAATAAAACGCATCTTCGAGGATGAGTTTATGAAAAAGGAAGAAACAATTTATAACTTGAGGGAATCATCAAGTCGTCCTGATCCTGAAGAGAATTTGGAGAGCGAACTACCTGTATTAATACATCGCGGTCGAAAATTTGAGGCTGAAGGTGTGGGATTTGATGAGAAATTACGGAAGATTGGGAACTTTCTTTTAAAATCATCGCCATCGTCAGGTGCTGGATTTGCGGCAGTTGGGATACAGGGCATGGCAGGCGCCGGTAAGACCACTCTGGTGCGCGAGTTTTTGAGTTGGTGGGTACTGCAAGGTGAATTTTCTCCTATAATTTGGTTATGCTTGTCGAATATAATCAAAGAAAATAAACAAGTAGAAGAGGAAATTGAGGTCAGCATTGTGAAATGTATGCTTAGTAAGCTGGACCATGATGCCGTTGTCGATGGAGATGGCATCATCCAGGAGGAGGAAAAGACAGTAAGTAGTGATAATAATAAGTCTGGTCATCTCCTTGCTGCGCTCTTGGAAAGGCTCAACCAAGGTTTATCAGATAAAAGGTATTTGATTGTGTTGGATGATGTGTGGCACATGAACGATTTCTACTCGGATTTAGGACATAGGGAACAACTACTTGAGGTTCAGGAAGGTGATAAGAAAGTTGGGGATCGCTTGTCGCACGGATTGCCTAAGGGTAGTGGTGGTGCGGTCATTGTCACTAGTAGGATATCGGAAGTGGTTGAAGCTATGGTGGTACCGGCGGAGGGGTCAGATCAACATTATAACAGCTTGATTATTCCTCTTGAGCCTTTGGACAGAGAAAGGTGCTGGGATATATTTAAGTACACTGTTTTTGGTTATCTTCCTGATTTTGAATATCAACAACATTTGGAAAAGGTTGAGAGTGAAATTAAGGATCTATGTTATGGTCTACCATTGGCCGCTAGGACACTCGCAGAAATCATGTCCCAAAACTCCCAAAATTTAGGGAGGACTTCTCCGCCCTACCGCAAATCTGAGGAGTTGCTTCAATTACCTGATTCCTTCTTCGGTATCCCAATGTTGGTGTTTATTGATATTCTAGAAGGAAGAGAACTCTTTGGGAAATTTTGCGACCTCCTTACTGAAGAGCAGGTTTTTGGTGCACAACTGAATAGAGGATACACGAGTGATAATCCTGAGAGGGTGCTAAAGGATGTTTATGGTACTCTAGAAAAGCTTAAGCAAAAAGGTTATTATGGTCTTGCTTCTGAAATTCAAAGGAAGATGAGAATTATAGTTGTTGGCAGGGATGAGTTTGTAAATTGGATTTTGGGAGTTATCTGTGATCTTAAATTGCCAGAGTCACCCTCCATTGCTCCGGTACCACCGCCGACTTTAGAAGACCAACACCAATGTGGAATCGCTGCTTCGTTTGGATGGAAGGACATTTCAAATATATCACCGCTGCGATCGTTCCTTGTTGACGTAGCACTGACAAAATCGATGAGAACTGATAGCTGGCATTGTCTCATTAGGATGAAACCACATTCTTCTTTAAAGTACCGATTACCATGTTATTTGCATGAGGTTGGAGATGTGGGAAAAGCGGATAATCCAACATTCTACGGACGATTTTGGTCCCACTTCAAGTTGGCTGCCTTCAACTATAGTTCAAGACTCGACCTAACCTCAGTTGCAATAGTAAAGGTGTTGAATCATCTTGGTGAGTGGGAAATGCTTCACATTCCTGAAAGAATAAATTCAATTTGTTGTCTTAACTTGCCTATCTTTGGTCCAAGAGAAGATCGTTGGGTGGCAAAAAATACGATGGAAGATGGAAAAACACCCACGAACCTATCTTTCATAGACAATGGACGCCTCGAAGTTATCGGTTCCGGACTTGGATTTTGGGACAAGAGCAGTAACTGGCCTCTCCTTGATCAGGTACGAGGAATTTGCTTCGAGTTTACAAAGGGTGCAAGAGTGCTTGTGGGCATAAGTTTTGATGATGGAGCAAAAGAGTTTGAAATCCCTACTGATGAATTGGTTGAGATTGAAATCTCTTACCACGGTCAAGTCAACATTCTTGCCGGTCTAAATTGCGAAGCAAAGAGTATCCATCACTCCAAATTGCCGGTCCAAATTGAGATGGAAAAATTGCACAGCGTTCAGATACCTGAGGCCAATCTAGAGCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

834

Amino Acids

94.77

Weight (kDa)

5.82

Isoelectric Point (pI)

36.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 381, 1104
Acc36I ACCTGC 1 cut(s) 1444
Acc65I GGTACC 2 cut(s) 1075, 1684
AccB1I GGYRCC 3 cut(s) 584, 1075, 1684
AccI GTMKAC 1 cut(s) 1252
AccII CGCG 3 cut(s) 136, 456, 609
AccIII TCCGGA 1 cut(s) 2198
AclWI GGATC 3 cut(s) 404, 996, 1245
AcoI YGGCCR 1 cut(s) 1260
AcsI RAATTY 8 cut(s) 421, 464, 641, 1303, 1427, 1575, 2062, 2256
AcuI CTGAAG 3 cut(s) 435, 495, 1467
AcyI GRCGYC 2 cut(s) 585, 2179
AdeI CACNNNGTG 1 cut(s) 207
AfaI GTAC 7 cut(s) 630, 1077, 1166, 1528, 1686, 1865, 2250
AfiI CCNNNNNNNGG 6 cut(s) 542, 790, 1085, 1384, 2093, 2245
AflII CTTAAG 1 cut(s) 1541
AhlI ACTAGT 1 cut(s) 1040
AjnI CCWGG 4 cut(s) 39, 180, 210, 783
AleI CACNNNNGTG 3 cut(s) 226, 602, 1716
AluBI AGCT 5 cut(s) 745, 1067, 1110, 1540, 1821
AluI AGCT 5 cut(s) 745, 1067, 1110, 1540, 1821
Alw21I GWGCWC 3 cut(s) 180, 1468, 2499
Alw26I GTCTC 1 cut(s) 1835
Alw44I GTGCAC 1 cut(s) 1464
AlwI GGATC 3 cut(s) 404, 996, 1245
AlwNI CAGNNNCTG 3 cut(s) 80, 548, 2229
Aor13HI TCCGGA 1 cut(s) 2198
AoxI GGCC 3 cut(s) 1260, 2231, 2484
ApaLI GTGCAC 1 cut(s) 1464
ApeKI GCWGC 5 cut(s) 326, 839, 1727, 1768, 1958
ApoI RAATTY 8 cut(s) 421, 464, 641, 1303, 1427, 1575, 2062, 2256
ArsI GACNNNNNNTTYG 6 cut(s) 47, 79, 2193, 2225, 2424, 2456
AseI ATTAAT 1 cut(s) 446
Asp700I GAANNNNTTC 4 cut(s) 35, 920, 2040, 2062
Asp718I GGTACC 2 cut(s) 1075, 1684
AspLEI GCGC 3 cut(s) 587, 609, 844
AspS9I GGNCC 5 cut(s) 184, 748, 1941, 2096, 2440
AsuHPI GGTGA 7 cut(s) 181, 193, 650, 983, 1659, 1755, 2039
AvaII GGWCC 5 cut(s) 184, 748, 1941, 2096, 2440
AxyI CCTNAGG 2 cut(s) 1011, 2481
BaeGI GKGCMC 1 cut(s) 1468
BaeI ACNNNNGTAYC 2 cut(s) 1474, 1507
BanI GGYRCC 3 cut(s) 584, 1075, 1684
BauI CACGAG 1 cut(s) 1486
BbsI GAAGAC 4 cut(s) 145, 208, 259, 1710
Bbv12I GWGCWC 3 cut(s) 180, 1468, 2499
BbvI GCAGC 5 cut(s) 313, 826, 1714, 1755, 1945
BccI CCATC 9 cut(s) 544, 761, 767, 1734, 2125, 2132, 2306, 2430, 2446
BceAI ACGGC 2 cut(s) 144, 743
BcgI CGANNNNNNTGC 2 cut(s) 2241, 2275
BciT130I CCWGG 4 cut(s) 41, 182, 212, 785
BciVI GTATCC 4 cut(s) 561, 1385, 1475, 2429
BclI TGATCA 1 cut(s) 2242
BcoDI GTCTC 1 cut(s) 1835
BcuI ACTAGT 1 cut(s) 1040
BfaI CTAG 5 cut(s) 1041, 1266, 1403, 1532, 2492
BfmI CTRYAG 1 cut(s) 1969
BfoI RGCGCY 1 cut(s) 588
BfrI CTTAAG 1 cut(s) 1541
BfuAI ACCTGC 1 cut(s) 1444
BfuI GTATCC 4 cut(s) 561, 1385, 1475, 2429
BisI GCNGC 8 cut(s) 320, 327, 558, 840, 1263, 1728, 1769, 1959
BlsI GCNGC 8 cut(s) 321, 328, 559, 841, 1264, 1729, 1770, 1960
Bme1390I CCNGG 4 cut(s) 41, 182, 212, 785
Bme18I GGWCC 5 cut(s) 184, 748, 1941, 2096, 2440
BmgT120I GGNCC 5 cut(s) 184, 748, 1941, 2096, 2440
BmiI GGNNCC 5 cut(s) 586, 1077, 1686, 1943, 2197
BmrFI CCNGG 4 cut(s) 41, 182, 212, 785
BmsI GCATC 4 cut(s) 53, 348, 745, 786
BpiI GAAGAC 4 cut(s) 145, 208, 259, 1710
BplI GAGNNNNNCTC 4 cut(s) 1303, 1335, 1655, 1687
BpmI CTGGAG 1 cut(s) 11
BpuEI CTTGAG 3 cut(s) 406, 977, 1145
Bsa29I ATCGAT 1 cut(s) 1805
BsaBI GATNNNNATC 1 cut(s) 2360
BsaHI GRCGYC 2 cut(s) 585, 2179
BsaJI CCNNGG 2 cut(s) 862, 2371
BsaWI WCCGGW 2 cut(s) 1681, 2198
Bsc4I CCNNNNNNNGG 6 cut(s) 542, 790, 1085, 1384, 2093, 2245
Bse118I RCCGGY 4 cut(s) 587, 1078, 2393, 2437
Bse1I ACTGG 1 cut(s) 2234
Bse21I CCTNAGG 2 cut(s) 1011, 2481
Bse3DI GCAATG 1 cut(s) 1674
Bse8I GATNNNNATC 1 cut(s) 2360
BseAI TCCGGA 1 cut(s) 2198
BseBI CCWGG 4 cut(s) 41, 182, 212, 785
BseCI ATCGAT 1 cut(s) 1805
BseDI CCNNGG 2 cut(s) 862, 2371
BseGI GGATG 8 cut(s) 16, 355, 780, 904, 1522, 1618, 1745, 1845
BseJI GATNNNNATC 1 cut(s) 2360
BseLI CCNNNNNNNGG 6 cut(s) 542, 790, 1085, 1384, 2093, 2245
BseMI GCAATG 1 cut(s) 1674
BseMII CTCAG 4 cut(s) 1329, 1491, 2007, 2472
BseNI ACTGG 1 cut(s) 2234
BseRI GAGGAG 2 cut(s) 803, 1355
BseSI GKGCMC 1 cut(s) 1468
BseXI GCAGC 5 cut(s) 313, 826, 1714, 1755, 1945
BseYI CCCAGC 2 cut(s) 5, 1149
Bsh1236I CGCG 3 cut(s) 136, 456, 609
Bsh1285I CGRYCG 2 cut(s) 460, 1775
BshFI GGCC 3 cut(s) 1262, 2233, 2486
BshNI GGYRCC 3 cut(s) 584, 1075, 1684
BshVI ATCGAT 1 cut(s) 1805
BsiEI CGRYCG 2 cut(s) 460, 1775
BsiHKAI GWGCWC 3 cut(s) 180, 1468, 2499
BsiSI CCGG 6 cut(s) 588, 1079, 1682, 2199, 2394, 2438
BslFI GGGAC 4 cut(s) 68, 1273, 1927, 2228
BslI CCNNNNNNNGG 6 cut(s) 542, 790, 1085, 1384, 2093, 2245
BsmAI GTCTC 1 cut(s) 1835
BsmFI GGGAC 4 cut(s) 68, 1273, 1927, 2228
BsmI GAATGC 1 cut(s) 197
BsnI GGCC 3 cut(s) 1262, 2233, 2486
Bsp1286I GDGCHC 3 cut(s) 180, 1468, 2499
Bsp13I TCCGGA 1 cut(s) 2198
Bsp143I GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
BspANI GGCC 3 cut(s) 1262, 2233, 2486
BspCNI CTCAG 4 cut(s) 1330, 1492, 2006, 2473
BspDI ATCGAT 1 cut(s) 1805
BspEI TCCGGA 1 cut(s) 2198
BspFNI CGCG 3 cut(s) 136, 456, 609
BspLI GGNNCC 5 cut(s) 586, 1077, 1686, 1943, 2197
BspMI ACCTGC 1 cut(s) 1444
BspPI GGATC 3 cut(s) 404, 996, 1245
BspQI GCTCTTC 1 cut(s) 1443
BspT107I GGYRCC 3 cut(s) 584, 1075, 1684
BspTI CTTAAG 1 cut(s) 1541
BsrDI GCAATG 1 cut(s) 1674
BsrFI RCCGGY 4 cut(s) 587, 1078, 2393, 2437
BsrI ACTGG 1 cut(s) 2234
BssAI RCCGGY 4 cut(s) 587, 1078, 2393, 2437
BssECI CCNNGG 2 cut(s) 862, 2371
BssMI GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
BssNI GRCGYC 2 cut(s) 585, 2179
BssSI CACGAG 1 cut(s) 1486
BssT1I CCWWGG 1 cut(s) 862
Bst2BI CACGAG 1 cut(s) 1486
Bst2UI CCWGG 4 cut(s) 41, 182, 212, 785
Bst4CI ACNGT 3 cut(s) 802, 1171, 2375
Bst6I CTCTTC 4 cut(s) 411, 696, 1405, 1443
BstACI GRCGYC 2 cut(s) 585, 2179
BstAFI CTTAAG 1 cut(s) 1541
BstAPI GCANNNNNTGC 1 cut(s) 1006
BstC8I GCNNGC 4 cut(s) 102, 324, 583, 1823
BstDEI CTNAG 7 cut(s) 50, 737, 1011, 1338, 1500, 1993, 2481
BstDSI CCRYGG 1 cut(s) 2371
BstENI CCTNNNNNAGG 1 cut(s) 2243
BstF5I GGATG 8 cut(s) 16, 355, 780, 904, 1522, 1618, 1745, 1845
BstFNI CGCG 3 cut(s) 136, 456, 609
BstH2I RGCGCY 1 cut(s) 588
BstHHI GCGC 3 cut(s) 587, 609, 844
BstKTI GATC 8 cut(s) 412, 991, 1096, 1240, 1651, 1775, 2110, 2245
BstMAI GTCTC 1 cut(s) 1835
BstMBI GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
BstMCI CGRYCG 2 cut(s) 460, 1775
BstMWI GCNNNNNNNGC 4 cut(s) 554, 582, 742, 1006
BstNI CCWGG 4 cut(s) 41, 182, 212, 785
BstSCI CCNGG 4 cut(s) 39, 180, 210, 783
BstSFI CTRYAG 1 cut(s) 1969
BstSLI GKGCMC 1 cut(s) 1468
BstUI CGCG 3 cut(s) 136, 456, 609
BstV1I GCAGC 5 cut(s) 313, 826, 1714, 1755, 1945
BstV2I GAAGAC 4 cut(s) 145, 208, 259, 1710
BstX2I RGATCY 1 cut(s) 1237
BstYI RGATCY 1 cut(s) 1237
Bsu15I ATCGAT 1 cut(s) 1805
Bsu36I CCTNAGG 2 cut(s) 1011, 2481
BsuI GTATCC 4 cut(s) 561, 1385, 1475, 2429
BsuRI GGCC 3 cut(s) 1262, 2233, 2486
BsuTUI ATCGAT 1 cut(s) 1805
BtgI CCRYGG 1 cut(s) 2371
BtgZI GCGATG 2 cut(s) 437, 516
BtsCI GGATG 8 cut(s) 16, 355, 780, 904, 1522, 1618, 1745, 1845
BtsIMutI CAGTG 3 cut(s) 1167, 1793, 2497
BveI ACCTGC 1 cut(s) 1444
Cac8I GCNNGC 4 cut(s) 102, 324, 583, 1823
CaiI CAGNNNCTG 3 cut(s) 80, 548, 2229
CfoI GCGC 3 cut(s) 587, 609, 844
Cfr10I RCCGGY 4 cut(s) 587, 1078, 2393, 2437
Cfr13I GGNCC 5 cut(s) 184, 748, 1941, 2096, 2440
ClaI ATCGAT 1 cut(s) 1805
CseI GACGC 2 cut(s) 203, 2187
Csp6I GTAC 7 cut(s) 629, 1076, 1165, 1527, 1685, 1864, 2249
CviAII CATG 7 cut(s) 224, 577, 752, 913, 1285, 1875, 1886
CviQI GTAC 7 cut(s) 629, 1076, 1165, 1527, 1685, 1864, 2249
DdeI CTNAG 7 cut(s) 50, 737, 1011, 1338, 1500, 1993, 2481
DinI GGCGCC 1 cut(s) 586
DpnI GATC 8 cut(s) 411, 990, 1095, 1239, 1650, 1774, 2109, 2244
DpnII GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
DraI TTTAAA 2 cut(s) 525, 1860
DraIII CACNNNGTG 1 cut(s) 207
EaeI YGGCCR 1 cut(s) 1260
Eam1104I CTCTTC 4 cut(s) 411, 696, 1405, 1443
EarI CTCTTC 4 cut(s) 411, 696, 1405, 1443
EciI GGCGGA 2 cut(s) 1097, 1311
Eco130I CCWWGG 1 cut(s) 862
Eco32I GATATC 1 cut(s) 1050
Eco47I GGWCC 5 cut(s) 184, 748, 1941, 2096, 2440
Eco57I CTGAAG 3 cut(s) 435, 495, 1467
Eco81I CCTNAGG 2 cut(s) 1011, 2481
EcoNI CCTNNNNNAGG 1 cut(s) 2243
EcoRII CCWGG 4 cut(s) 39, 180, 210, 783
EcoRV GATATC 1 cut(s) 1050
EcoT14I CCWWGG 1 cut(s) 862
EgeI GGCGCC 1 cut(s) 586
EheI GGCGCC 1 cut(s) 586
ErhI CCWWGG 1 cut(s) 862
FaeI CATG 7 cut(s) 227, 580, 755, 916, 1288, 1878, 1889
FaqI GGGAC 4 cut(s) 68, 1273, 1927, 2228
FatI CATG 7 cut(s) 223, 576, 751, 912, 1284, 1874, 1885
FbaI TGATCA 1 cut(s) 2242
FblI GTMKAC 1 cut(s) 1252
Fnu4HI GCNGC 8 cut(s) 320, 327, 558, 840, 1263, 1728, 1769, 1959
FokI GGATG 8 cut(s) 23, 362, 767, 911, 1529, 1625, 1752, 1852
Fsp4HI GCNGC 8 cut(s) 320, 327, 558, 840, 1263, 1728, 1769, 1959
FspBI CTAG 5 cut(s) 1041, 1266, 1403, 1532, 2492
GlaI GCGC 3 cut(s) 586, 608, 843
GluI GCNGC 8 cut(s) 320, 327, 558, 840, 1263, 1728, 1769, 1959
GsaI CCCAGC 2 cut(s) 9, 1153
GsuI CTGGAG 1 cut(s) 11
HaeII RGCGCY 1 cut(s) 588
HaeIII GGCC 3 cut(s) 1262, 2233, 2486
HapII CCGG 6 cut(s) 588, 1079, 1682, 2199, 2394, 2438
HgaI GACGC 2 cut(s) 203, 2187
HhaI GCGC 3 cut(s) 587, 609, 844
Hin1I GRCGYC 2 cut(s) 585, 2179
Hin1II CATG 7 cut(s) 227, 580, 755, 916, 1288, 1878, 1889
Hin6I GCGC 3 cut(s) 585, 607, 842
HinP1I GCGC 3 cut(s) 585, 607, 842
HincII GTYRAC 2 cut(s) 1786, 2383
HindII GTYRAC 2 cut(s) 1786, 2383
HindIII AAGCTT 1 cut(s) 1538
HinfI GANTC 7 cut(s) 253, 392, 1361, 1664, 1722, 1980, 2017
HpaII CCGG 6 cut(s) 588, 1079, 1682, 2199, 2394, 2438
HphI GGTGA 7 cut(s) 181, 193, 650, 983, 1659, 1755, 2039
Hpy166II GTNNAC 6 cut(s) 1167, 1253, 1466, 1786, 2271, 2383
Hpy188I TCNGA 7 cut(s) 874, 931, 1054, 1093, 1339, 1573, 2475
Hpy8I GTNNAC 6 cut(s) 1167, 1253, 1466, 1786, 2271, 2383
Hpy99I CGWCG 2 cut(s) 165, 197
HpyAV CCTTC 6 cut(s) 470, 962, 1375, 1400, 1738, 1972
HpyCH4III ACNGT 3 cut(s) 802, 1171, 2375
HpyCH4IV ACGT 1 cut(s) 1788
HpyCH4V TGCA 7 cut(s) 329, 634, 1466, 1885, 2000, 2282, 2464
HpyF10VI GCNNNNNNNGC 4 cut(s) 554, 582, 742, 1006
HpyF3I CTNAG 7 cut(s) 50, 737, 1011, 1338, 1500, 1993, 2481
HpySE526I ACGT 1 cut(s) 1788
Hsp92I GRCGYC 2 cut(s) 585, 2179
Hsp92II CATG 7 cut(s) 227, 580, 755, 916, 1288, 1878, 1889
HspAI GCGC 3 cut(s) 585, 607, 842
KasI GGCGCC 1 cut(s) 584
Kpn2I TCCGGA 1 cut(s) 2198
KpnI GGTACC 2 cut(s) 1079, 1688
Ksp22I TGATCA 1 cut(s) 2242
Kzo9I GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
LguI GCTCTTC 1 cut(s) 1443
LmnI GCTCC 3 cut(s) 183, 1684, 2315
Lsp1109I GCAGC 5 cut(s) 313, 826, 1714, 1755, 1945
LweI GCATC 4 cut(s) 53, 348, 745, 786
MaeI CTAG 5 cut(s) 1041, 1266, 1403, 1532, 2492
MaeII ACGT 1 cut(s) 1788
MaeIII GTNAC 3 cut(s) 1036, 1665, 2225
MalI GATC 8 cut(s) 411, 990, 1095, 1239, 1650, 1774, 2109, 2244
MboI GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
MflI RGATCY 1 cut(s) 1237
MhlI GDGCHC 3 cut(s) 180, 1468, 2499
Mly113I GGCGCC 1 cut(s) 585
MlyI GAGTC 3 cut(s) 247, 1673, 1974
MmeI TCCRAC 3 cut(s) 876, 1873, 1943
MroI TCCGGA 1 cut(s) 2198
MroXI GAANNNNTTC 4 cut(s) 35, 920, 2040, 2062
MseI TTAA 8 cut(s) 446, 524, 1161, 1233, 1542, 1653, 1859, 2079
MslI CAYNNNNRTG 5 cut(s) 226, 602, 1716, 1838, 2025
MspA1I CMGCKG 1 cut(s) 1768
MspCI CTTAAG 1 cut(s) 1541
MspI CCGG 6 cut(s) 588, 1079, 1682, 2199, 2394, 2438
MspR9I CCNGG 4 cut(s) 41, 182, 212, 785
Mva1269I GAATGC 1 cut(s) 197
MvaI CCWGG 4 cut(s) 41, 182, 212, 785
MvnI CGCG 3 cut(s) 136, 456, 609
MwoI GCNNNNNNNGC 4 cut(s) 554, 582, 742, 1006
NarI GGCGCC 1 cut(s) 585
NdeII GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
NlaIII CATG 7 cut(s) 227, 580, 755, 916, 1288, 1878, 1889
NlaIV GGNNCC 5 cut(s) 586, 1077, 1686, 1943, 2197
NmuCI GTSAC 2 cut(s) 1036, 1665
OliI CACNNNNGTG 3 cut(s) 226, 602, 1716
PciSI GCTCTTC 1 cut(s) 1443
PctI GAATGC 1 cut(s) 197
PdmI GAANNNNTTC 4 cut(s) 35, 920, 2040, 2062
PfeI GAWTC 4 cut(s) 392, 1361, 1722, 2017
PfoI TCCNGGA 2 cut(s) 180, 783
PkrI GCNGC 8 cut(s) 321, 328, 559, 841, 1264, 1729, 1770, 1960
Ple19I CGATCG 1 cut(s) 1775
PleI GAGTC 3 cut(s) 247, 1672, 1974
PluTI GGCGCC 1 cut(s) 588
PpsI GAGTC 3 cut(s) 247, 1672, 1974
PshBI ATTAAT 1 cut(s) 446
PsiI TTATAA 2 cut(s) 381, 1104
Psp6I CCWGG 4 cut(s) 39, 180, 210, 783
PspFI CCCAGC 2 cut(s) 5, 1149
PspGI CCWGG 4 cut(s) 39, 180, 210, 783
PspN4I GGNNCC 5 cut(s) 586, 1077, 1686, 1943, 2197
PspPI GGNCC 5 cut(s) 184, 748, 1941, 2096, 2440
PsrI GAACNNNNNNTAC 2 cut(s) 908, 940
PstNI CAGNNNCTG 3 cut(s) 80, 548, 2229
PsuI RGATCY 1 cut(s) 1237
PvuI CGATCG 1 cut(s) 1775
RsaI GTAC 7 cut(s) 630, 1077, 1166, 1528, 1686, 1865, 2250
RsaNI GTAC 7 cut(s) 629, 1076, 1165, 1527, 1685, 1864, 2249
RseI CAYNNNNRTG 5 cut(s) 226, 602, 1716, 1838, 2025
SapI GCTCTTC 1 cut(s) 1443
SaqAI TTAA 8 cut(s) 446, 524, 1161, 1233, 1542, 1653, 1859, 2079
SatI GCNGC 8 cut(s) 320, 327, 558, 840, 1263, 1728, 1769, 1959
Sau3AI GATC 8 cut(s) 409, 988, 1093, 1237, 1648, 1772, 2107, 2242
Sau96I GGNCC 5 cut(s) 184, 748, 1941, 2096, 2440
SchI GAGTC 3 cut(s) 247, 1673, 1974
ScrFI CCNGG 4 cut(s) 41, 182, 212, 785
SduI GDGCHC 3 cut(s) 180, 1468, 2499
SfaNI GCATC 4 cut(s) 53, 348, 745, 786
SfcI CTRYAG 1 cut(s) 1969
SfoI GGCGCC 1 cut(s) 586
SinI GGWCC 5 cut(s) 184, 748, 1941, 2096, 2440
SmiMI CAYNNNNRTG 5 cut(s) 226, 602, 1716, 1838, 2025
SmlI CTYRAG 4 cut(s) 385, 956, 1124, 1541
SmoI CTYRAG 4 cut(s) 385, 956, 1124, 1541
SpeI ACTAGT 1 cut(s) 1040
SspDI GGCGCC 1 cut(s) 584
SspMI CTAG 5 cut(s) 1041, 1266, 1403, 1532, 2492
StyD4I CCNGG 4 cut(s) 39, 180, 210, 783
StyI CCWWGG 1 cut(s) 862
TaaI ACNGT 3 cut(s) 802, 1171, 2375
TaiI ACGT 1 cut(s) 1791
TaqI TCGA 8 cut(s) 345, 460, 671, 765, 1805, 1983, 2184, 2265
TatI WGTACW 1 cut(s) 1164
TauI GCSGC 3 cut(s) 322, 560, 1265
TfiI GAWTC 4 cut(s) 392, 1361, 1722, 2017
Tru1I TTAA 8 cut(s) 446, 524, 1161, 1233, 1542, 1653, 1859, 2079
Tru9I TTAA 8 cut(s) 446, 524, 1161, 1233, 1542, 1653, 1859, 2079
TscAI CASTG 2 cut(s) 1174, 1800
TseFI GTSAC 2 cut(s) 1036, 1665
TseI GCWGC 5 cut(s) 326, 839, 1727, 1768, 1958
Tsp45I GTSAC 2 cut(s) 1036, 1665
TspDTI ATGAA 6 cut(s) 326, 374, 929, 1856, 2155, 2358
TspGWI ACGGA 3 cut(s) 517, 1017, 1944
TspRI CASTG 2 cut(s) 1174, 1800
Vha464I CTTAAG 1 cut(s) 1541
VneI GTGCAC 1 cut(s) 1464
VpaK11BI GGWCC 5 cut(s) 184, 748, 1941, 2096, 2440
VspI ATTAAT 1 cut(s) 446
XagI CCTNNNNNAGG 1 cut(s) 2243
XapI RAATTY 8 cut(s) 421, 464, 641, 1303, 1427, 1575, 2062, 2256
XbaI TCTAGA 3 cut(s) 1402, 1531, 2491
XcmI CCANNNNNNNNNTGG 1 cut(s) 1715
XmiI GTMKAC 1 cut(s) 1252
XmnI GAANNNNTTC 4 cut(s) 35, 920, 2040, 2062
XspI CTAG 5 cut(s) 1041, 1266, 1403, 1532, 2492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.