Rmu_sc0000851.1_g000022

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000851.1
OG0000202
Physical Location & Seq
Forward (+)
72881 .. 73937
1057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000851.1_g000022.1.cds

Sequence Viewer

Length: 963 bp
atggcattagatgttgctgaattgctgtggagcaagttcttgaagtctctggcagagctagactctgaatctaattcaggttctattaccatctctgtcttcaaatcatcaataaaagctctcgtgtctgatttcgaagcaatcaaagatgttgtgaatgagagagacataatgccggaaccttattcctactctgaaactatcaatctgctctacaaactcaacgatgcattggctgactgccgagtcttcacacacgagagcttgagcacttgccgcaacaaccaattggcaatcctcggacaaagaccgaattcaccggatccggacctaaagtacctcttttcgttgagtgaggaagaagaacaatatagtaagttcagctttgaaacatgtatctttgatagtgatggccaaatcatagaggcaaggattgttggccttgataagctcctggaaaggctaagccgcctgctgttatcggataaatgctatttgattgtgttggatgatgtgtgtgatcggcacattaacattatggaacgcttatgcagcggattgcccaagcataatggtggtgttgtcattgtcactactagattgaaggaagtggctcaaaagctggggaaacaacatagattgcaactggttcatgttaagcctctggacagagagatttgcgggcgtataattgaggagcaggcgtattccagtagaaaaagttcaaacctctcacgtgatggagctacgagaaagatggaggaactcaaggatcagtgccacggtctaccgttggttgcaaaaacaattgcaaattcttttgcagtgggatttggaggcgacggatctgaagagagagatggtgatcacggggaggaagtaggaacttttgaagaattagttgaagacgaccagggttcaagaattgctgaccggatccatcatgttcaagaatcttcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

320

Amino Acids

35.91

Weight (kDa)

5.02

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 245
AccI GTMKAC 1 cut(s) 787
AccIII TCCGGA 1 cut(s) 325
AciI CCGC 4 cut(s) 277, 469, 555, 681
AclWI GGATC 6 cut(s) 317, 330, 780, 853, 931, 944
AcoI YGGCCR 1 cut(s) 412
AcsI RAATTY 2 cut(s) 313, 814
AcuI CTGAAG 1 cut(s) 870
AcvI CACGTG 1 cut(s) 737
AfaI GTAC 1 cut(s) 338
AflIII ACRYGT 1 cut(s) 392
AgsI TTSAA 9 cut(s) 43, 103, 389, 604, 726, 893, 905, 921, 950
AjnI CCWGG 2 cut(s) 453, 912
AluBI AGCT 7 cut(s) 58, 119, 264, 384, 451, 622, 746
AluI AGCT 7 cut(s) 58, 119, 264, 384, 451, 622, 746
Alw21I GWGCWC 1 cut(s) 272
Alw26I GTCTC 2 cut(s) 51, 159
AlwI GGATC 6 cut(s) 317, 330, 780, 853, 931, 944
Aor13HI TCCGGA 1 cut(s) 325
AoxI GGCC 2 cut(s) 412, 439
ApeKI GCWGC 1 cut(s) 552
ApoI RAATTY 2 cut(s) 313, 814
Asp700I GAANNNNTTC 1 cut(s) 721
AspS9I GGNCC 1 cut(s) 328
AsuHPI GGTGA 2 cut(s) 309, 875
AsuII TTCGAA 1 cut(s) 135
AvaII GGWCC 1 cut(s) 328
BalI TGGCCA 1 cut(s) 414
BamHI GGATCC 2 cut(s) 322, 936
BauI CACGAG 2 cut(s) 122, 257
BbrPI CACGTG 1 cut(s) 737
BbsI GAAGAC 3 cut(s) 91, 241, 912
Bbv12I GWGCWC 1 cut(s) 272
BbvI GCAGC 1 cut(s) 564
BccI CCATC 6 cut(s) 98, 404, 734, 751, 854, 948
BciT130I CCWGG 2 cut(s) 455, 914
BclI TGATCA 1 cut(s) 865
BcoDI GTCTC 2 cut(s) 51, 159
BfaI CTAG 2 cut(s) 59, 597
BisI GCNGC 3 cut(s) 277, 469, 553
BlpI GCTNAGC 1 cut(s) 464
BlsI GCNGC 3 cut(s) 278, 470, 554
Bme1390I CCNGG 2 cut(s) 455, 914
Bme18I GGWCC 1 cut(s) 328
BmgT120I GGNCC 1 cut(s) 328
BmiI GGNNCC 3 cut(s) 180, 324, 938
BmrFI CCNGG 2 cut(s) 455, 914
BmsI GCATC 1 cut(s) 217
BpiI GAAGAC 3 cut(s) 91, 241, 912
BplI GAGNNNNNCTC 2 cut(s) 47, 79
Bpu1102I GCTNAGC 1 cut(s) 464
Bpu14I TTCGAA 1 cut(s) 135
BpuEI CTTGAG 2 cut(s) 286, 752
BsaAI YACGTR 1 cut(s) 737
BsaBI GATNNNNATC 1 cut(s) 864
BsaJI CCNNGG 3 cut(s) 298, 781, 913
BsaWI WCCGGW 3 cut(s) 319, 325, 933
BsaXI ACNNNNNCTCC 2 cut(s) 689, 719
Bse1I ACTGG 2 cut(s) 651, 711
Bse8I GATNNNNATC 1 cut(s) 864
BseAI TCCGGA 1 cut(s) 325
BseBI CCWGG 2 cut(s) 455, 914
BseDI CCNNGG 3 cut(s) 298, 781, 913
BseGI GGATG 1 cut(s) 514
BseJI GATNNNNATC 1 cut(s) 864
BseNI ACTGG 2 cut(s) 651, 711
BseRI GAGGAG 1 cut(s) 710
BseXI GCAGC 1 cut(s) 564
BseYI CCCAGC 1 cut(s) 622
BshFI GGCC 2 cut(s) 414, 441
BsiHKAI GWGCWC 1 cut(s) 272
BsiSI CCGG 4 cut(s) 176, 320, 326, 934
BsmAI GTCTC 2 cut(s) 51, 159
BsnI GGCC 2 cut(s) 414, 441
Bsp119I TTCGAA 1 cut(s) 135
Bsp1286I GDGCHC 1 cut(s) 272
Bsp13I TCCGGA 1 cut(s) 325
Bsp143I GATC 6 cut(s) 322, 520, 772, 845, 865, 936
Bsp1720I GCTNAGC 1 cut(s) 464
BspACI CCGC 4 cut(s) 277, 469, 555, 681
BspANI GGCC 2 cut(s) 414, 441
BspEI TCCGGA 1 cut(s) 325
BspLI GGNNCC 3 cut(s) 180, 324, 938
BspPI GGATC 6 cut(s) 317, 330, 780, 853, 931, 944
BspT104I TTCGAA 1 cut(s) 135
BsrI ACTGG 2 cut(s) 651, 711
BssECI CCNNGG 3 cut(s) 298, 781, 913
BssMI GATC 6 cut(s) 322, 520, 772, 845, 865, 936
BssSI CACGAG 2 cut(s) 122, 257
Bst2BI CACGAG 2 cut(s) 122, 257
Bst2UI CCWGG 2 cut(s) 455, 914
Bst4CI ACNGT 2 cut(s) 785, 792
Bst6I CTCTTC 1 cut(s) 846
BstBAI YACGTR 1 cut(s) 737
BstBI TTCGAA 1 cut(s) 135
BstC8I GCNNGC 3 cut(s) 473, 683, 702
BstDEI CTNAG 1 cut(s) 464
BstDSI CCRYGG 1 cut(s) 781
BstF5I GGATG 1 cut(s) 514
BstKTI GATC 6 cut(s) 325, 523, 775, 848, 868, 939
BstMAI GTCTC 2 cut(s) 51, 159
BstMBI GATC 6 cut(s) 322, 520, 772, 845, 865, 936
BstMWI GCNNNNNNNGC 2 cut(s) 276, 552
BstNI CCWGG 2 cut(s) 455, 914
BstNSI RCATGY 1 cut(s) 396
BstSCI CCNGG 2 cut(s) 453, 912
BstV1I GCAGC 1 cut(s) 564
BstV2I GAAGAC 3 cut(s) 91, 241, 912
BstX2I RGATCY 3 cut(s) 322, 845, 936
BstYI RGATCY 3 cut(s) 322, 845, 936
BsuRI GGCC 2 cut(s) 414, 441
BtgI CCRYGG 1 cut(s) 781
BtsCI GGATG 1 cut(s) 514
BtsI GCAGTG 1 cut(s) 831
BtsIMutI CAGTG 2 cut(s) 782, 831
Cac8I GCNNGC 3 cut(s) 473, 683, 702
Cfr13I GGNCC 1 cut(s) 328
Csp6I GTAC 1 cut(s) 337
CviAII CATG 3 cut(s) 393, 653, 944
CviQI GTAC 1 cut(s) 337
DdeI CTNAG 1 cut(s) 464
DpnI GATC 6 cut(s) 324, 522, 774, 847, 867, 938
DpnII GATC 6 cut(s) 322, 520, 772, 845, 865, 936
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 1 cut(s) 412
Eam1104I CTCTTC 1 cut(s) 846
EarI CTCTTC 1 cut(s) 846
Eco47I GGWCC 1 cut(s) 328
Eco57I CTGAAG 1 cut(s) 870
Eco72I CACGTG 1 cut(s) 737
EcoRI GAATTC 1 cut(s) 313
EcoRII CCWGG 2 cut(s) 453, 912
EcoT22I ATGCAT 1 cut(s) 232
FaeI CATG 3 cut(s) 396, 656, 947
FalI AAGNNNNNCTT 4 cut(s) 326, 358, 368, 400
FatI CATG 3 cut(s) 392, 652, 943
FauI CCCGC 1 cut(s) 674
FbaI TGATCA 1 cut(s) 865
FblI GTMKAC 1 cut(s) 787
Fnu4HI GCNGC 3 cut(s) 277, 469, 553
FokI GGATG 1 cut(s) 521
Fsp4HI GCNGC 3 cut(s) 277, 469, 553
FspBI CTAG 2 cut(s) 59, 597
GluI GCNGC 3 cut(s) 277, 469, 553
GsaI CCCAGC 1 cut(s) 626
HaeIII GGCC 2 cut(s) 414, 441
HapII CCGG 4 cut(s) 176, 320, 326, 934
Hin1II CATG 3 cut(s) 396, 656, 947
HinfI GANTC 4 cut(s) 62, 68, 246, 953
HpaII CCGG 4 cut(s) 176, 320, 326, 934
HphI GGTGA 2 cut(s) 309, 875
Hpy166II GTNNAC 1 cut(s) 788
Hpy188I TCNGA 6 cut(s) 67, 130, 196, 302, 484, 850
Hpy188III TCNNGA 6 cut(s) 40, 326, 665, 921, 950, 960
Hpy8I GTNNAC 1 cut(s) 788
Hpy99I CGWCG 1 cut(s) 845
HpyAV CCTTC 1 cut(s) 598
HpyCH4III ACNGT 2 cut(s) 785, 792
HpyCH4IV ACGT 1 cut(s) 736
HpyCH4V TGCA 6 cut(s) 230, 552, 643, 800, 812, 824
HpyF10VI GCNNNNNNNGC 2 cut(s) 276, 552
HpyF3I CTNAG 1 cut(s) 464
HpySE526I ACGT 1 cut(s) 736
Hsp92II CATG 3 cut(s) 396, 656, 947
Kpn2I TCCGGA 1 cut(s) 325
Ksp22I TGATCA 1 cut(s) 865
Kzo9I GATC 6 cut(s) 322, 520, 772, 845, 865, 936
LmnI GCTCC 4 cut(s) 30, 456, 697, 743
Lsp1109I GCAGC 1 cut(s) 564
LweI GCATC 1 cut(s) 217
MaeI CTAG 2 cut(s) 59, 597
MaeII ACGT 1 cut(s) 736
MaeIII GTNAC 1 cut(s) 589
MalI GATC 6 cut(s) 324, 522, 774, 847, 867, 938
MboI GATC 6 cut(s) 322, 520, 772, 845, 865, 936
MboII GAAGA 8 cut(s) 91, 241, 371, 374, 863, 905, 917, 948
MfeI CAATTG 2 cut(s) 287, 807
MflI RGATCY 3 cut(s) 322, 845, 936
MhlI GDGCHC 1 cut(s) 272
MlsI TGGCCA 1 cut(s) 414
MluCI AATT 9 cut(s) 20, 73, 287, 313, 690, 807, 814, 896, 924
MluNI TGGCCA 1 cut(s) 414
MlyI GAGTC 2 cut(s) 56, 255
MmeI TCCRAC 1 cut(s) 486
Mox20I TGGCCA 1 cut(s) 414
Mph1103I ATGCAT 1 cut(s) 232
MroI TCCGGA 1 cut(s) 325
MroXI GAANNNNTTC 1 cut(s) 721
MscI TGGCCA 1 cut(s) 414
MseI TTAA 2 cut(s) 531, 657
MslI CAYNNNNRTG 1 cut(s) 573
Msp20I TGGCCA 1 cut(s) 414
MspA1I CMGCKG 1 cut(s) 555
MspI CCGG 4 cut(s) 176, 320, 326, 934
MspR9I CCNGG 2 cut(s) 455, 914
MunI CAATTG 2 cut(s) 287, 807
MvaI CCWGG 2 cut(s) 455, 914
MwoI GCNNNNNNNGC 2 cut(s) 276, 552
NdeII GATC 6 cut(s) 322, 520, 772, 845, 865, 936
NlaIII CATG 3 cut(s) 396, 656, 947
NlaIV GGNNCC 3 cut(s) 180, 324, 938
NmeAIII GCCGAG 1 cut(s) 269
NmuCI GTSAC 1 cut(s) 589
NsiI ATGCAT 1 cut(s) 232
NspI RCATGY 1 cut(s) 396
NspV TTCGAA 1 cut(s) 135
PciI ACATGT 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 721
PfeI GAWTC 2 cut(s) 68, 953
PfoI TCCNGGA 1 cut(s) 453
PkrI GCNGC 3 cut(s) 278, 470, 554
PleI GAGTC 2 cut(s) 56, 254
PmaCI CACGTG 1 cut(s) 737
PmlI CACGTG 1 cut(s) 737
PpsI GAGTC 2 cut(s) 56, 254
Ppu21I YACGTR 1 cut(s) 737
PscI ACATGT 1 cut(s) 392
Psp6I CCWGG 2 cut(s) 453, 912
PspCI CACGTG 1 cut(s) 737
PspFI CCCAGC 1 cut(s) 622
PspGI CCWGG 2 cut(s) 453, 912
PspN4I GGNNCC 3 cut(s) 180, 324, 938
PspPI GGNCC 1 cut(s) 328
PsrI GAACNNNNNNTAC 2 cut(s) 706, 738
PsuI RGATCY 3 cut(s) 322, 845, 936
RsaI GTAC 1 cut(s) 338
RsaNI GTAC 1 cut(s) 337
RseI CAYNNNNRTG 1 cut(s) 573
SaqAI TTAA 2 cut(s) 531, 657
SatI GCNGC 3 cut(s) 277, 469, 553
Sau3AI GATC 6 cut(s) 322, 520, 772, 845, 865, 936
Sau96I GGNCC 1 cut(s) 328
SchI GAGTC 2 cut(s) 56, 255
ScrFI CCNGG 2 cut(s) 455, 914
SduI GDGCHC 1 cut(s) 272
SfaNI GCATC 1 cut(s) 217
SfuI TTCGAA 1 cut(s) 135
SinI GGWCC 1 cut(s) 328
SmiMI CAYNNNNRTG 1 cut(s) 573
SmlI CTYRAG 2 cut(s) 265, 767
SmoI CTYRAG 2 cut(s) 265, 767
Sse9I AATT 9 cut(s) 20, 73, 287, 313, 690, 807, 814, 896, 924
SsiI CCGC 4 cut(s) 277, 469, 555, 681
SspMI CTAG 2 cut(s) 59, 597
StyD4I CCNGG 2 cut(s) 453, 912
TaaI ACNGT 2 cut(s) 785, 792
TaiI ACGT 1 cut(s) 739
TaqI TCGA 1 cut(s) 135
TaqII GACCGA 1 cut(s) 325
TasI AATT 9 cut(s) 20, 73, 287, 313, 690, 807, 814, 896, 924
TauI GCSGC 2 cut(s) 279, 471
TfiI GAWTC 2 cut(s) 68, 953
Tru1I TTAA 2 cut(s) 531, 657
Tru9I TTAA 2 cut(s) 531, 657
TscAI CASTG 2 cut(s) 782, 831
TseFI GTSAC 1 cut(s) 589
TseI GCWGC 1 cut(s) 552
Tsp45I GTSAC 1 cut(s) 589
TspDTI ATGAA 1 cut(s) 641
TspGWI ACGGA 1 cut(s) 858
TspRI CASTG 2 cut(s) 782, 831
VpaK11BI GGWCC 1 cut(s) 328
XapI RAATTY 2 cut(s) 313, 814
XceI RCATGY 1 cut(s) 396
XmiI GTMKAC 1 cut(s) 787
XmnI GAANNNNTTC 1 cut(s) 721
XspI CTAG 2 cut(s) 59, 597
Zsp2I ATGCAT 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.