Rorug02G0174400

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
15969724 .. 15971759
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0174400.1

Sequence Viewer

Length: 510 bp
ATGGCAAGCCTCTATGGAGGGCCTTCTAGGAAAGAGAAACCTAGAGCGAGACATCATGGGTTAAATCAGCAAAAGAGGCAAGAGATTAAGGAAGCCTTCGAGTTGTTCGACACTGATGGCTCAGGCACTATTGATGCCAAAGAGTTGAATGTTGCCATGAGGGCTCTTGGATTCGAGATGACAGAAGAGCAAATTAACCAAATGATTGCAGATGTTGACAAGGACGGAAGTGGTGCCATTGATTTTGATGAGTTTGCTCACATGATGACAGCCAAAATCGGGGAACGGGACACAAAGGAGGAACTGATGAAAGCATTCCATATCCTTGACCAAGATAACAATGGCAAGATATCTACTTCAGACATTAAGAAGATTGCAAAAGAGCTGGGTGAGAATTTCACTGATAGAGATATTCAAGAGATGGTTGAGGAAGCAGACCGAGACCGTGATGGAGAAGTTAGTGCTGAGGAGTTCATCAGGATGATGAAGAGAACAACATATGGCTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

169

Amino Acids

19.29

Weight (kDa)

4.84

Isoelectric Point (pI)

22.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AIF-1 PF21008 23 - 92 2.7e-06 Allograft inflammatory factor 1
EF-hand_7 PF13499 27 - 90 2.3e-18 EF-hand domain pair
EF-hand_1 PF00036 28 - 56 1.8e-08 EF hand domain
EF-hand_6 PF13405 28 - 57 1.8e-08 EF-hand domain
EF-hand_5 PF13202 29 - 50 3.5e-06 EF hand
EF-hand_9 PF14658 31 - 92 8.1e-07 EF-hand domain
EF-hand_8 PF13833 42 - 90 4.8e-07 EF-hand domain pair
EF-hand_1 PF00036 65 - 91 8.3e-08 EF hand domain
EF-hand_7 PF13499 99 - 163 2.6e-16 EF-hand domain pair
EF-hand_6 PF13405 101 - 130 2e-06 EF-hand domain
EF-hand_8 PF13833 116 - 164 9.3e-10 EF-hand domain pair
EF-hand_1 PF00036 137 - 164 1.6e-07 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 233
AcsI RAATTY 1 cut(s) 394
AcuI CTGAAG 1 cut(s) 342
AfiI CCNNNNNNNGG 1 cut(s) 279
AgsI TTSAA 2 cut(s) 148, 416
AluBI AGCT 1 cut(s) 385
AluI AGCT 1 cut(s) 385
Alw26I GTCTC 2 cut(s) 43, 435
AoxI GGCC 1 cut(s) 20
ApoI RAATTY 1 cut(s) 394
Asp700I GAANNNNTTC 1 cut(s) 314
AspS9I GGNCC 1 cut(s) 20
AsuHPI GGTGA 1 cut(s) 401
BanI GGYRCC 1 cut(s) 233
BanII GRGCYC 1 cut(s) 166
BbvCI CCTCAGC 1 cut(s) 465
BccI CCATC 3 cut(s) 110, 415, 443
BcoDI GTCTC 2 cut(s) 43, 435
BfaI CTAG 2 cut(s) 27, 42
BglI GCCNNNNNGGC 1 cut(s) 161
BmgT120I GGNCC 1 cut(s) 20
BmiI GGNNCC 1 cut(s) 235
BmsI GCATC 1 cut(s) 124
Bpu10I CCTNAGC 2 cut(s) 121, 465
BsaI GGTCTC 1 cut(s) 435
Bsc4I CCNNNNNNNGG 1 cut(s) 279
BseGI GGATG 1 cut(s) 486
BseLI CCNNNNNNNGG 1 cut(s) 279
BseMII CTCAG 2 cut(s) 135, 456
BseRI GAGGAG 1 cut(s) 482
BseYI CCCAGC 1 cut(s) 385
BshFI GGCC 1 cut(s) 22
BshNI GGYRCC 1 cut(s) 233
BslFI GGGAC 1 cut(s) 302
BslI CCNNNNNNNGG 1 cut(s) 279
BsmAI GTCTC 2 cut(s) 43, 435
BsmFI GGGAC 1 cut(s) 302
BsmI GAATGC 1 cut(s) 314
BsnI GGCC 1 cut(s) 22
Bso31I GGTCTC 1 cut(s) 435
Bsp1286I GDGCHC 1 cut(s) 166
BspANI GGCC 1 cut(s) 22
BspCNI CTCAG 2 cut(s) 134, 457
BspLI GGNNCC 1 cut(s) 235
BspQI GCTCTTC 1 cut(s) 180
BspT107I GGYRCC 1 cut(s) 233
BspTNI GGTCTC 1 cut(s) 435
Bst4CI ACNGT 1 cut(s) 446
Bst6I CTCTTC 2 cut(s) 180, 482
BstC8I GCNNGC 1 cut(s) 7
BstDEI CTNAG 2 cut(s) 121, 465
BstF5I GGATG 1 cut(s) 486
BstMAI GTCTC 2 cut(s) 43, 435
BstMWI GCNNNNNNNGC 2 cut(s) 76, 161
BsuRI GGCC 1 cut(s) 22
BtsCI GGATG 1 cut(s) 486
BtsIMutI CAGTG 2 cut(s) 111, 399
Cac8I GCNNGC 1 cut(s) 7
Cfr13I GGNCC 1 cut(s) 20
CviAII CATG 3 cut(s) 56, 157, 262
CviJI RGCY 8 cut(s) 9, 22, 95, 120, 164, 272, 385, 504
CviKI_1 RGCY 8 cut(s) 9, 22, 95, 120, 164, 272, 385, 504
DdeI CTNAG 2 cut(s) 121, 465
Eam1104I CTCTTC 2 cut(s) 180, 482
EarI CTCTTC 2 cut(s) 180, 482
Eco24I GRGCYC 1 cut(s) 166
Eco31I GGTCTC 1 cut(s) 435
Eco32I GATATC 1 cut(s) 351
Eco57I CTGAAG 1 cut(s) 342
EcoO109I RGGNCCY 1 cut(s) 20
EcoRV GATATC 1 cut(s) 351
EcoT38I GRGCYC 1 cut(s) 166
FaeI CATG 3 cut(s) 59, 160, 265
FaiI YATR 7 cut(s) 15, 57, 158, 263, 321, 499, 501
FalI AAGNNNNNCTT 2 cut(s) 80, 112
FaqI GGGAC 1 cut(s) 302
FatI CATG 3 cut(s) 55, 156, 261
FauNDI CATATG 1 cut(s) 499
FokI GGATG 1 cut(s) 493
FriOI GRGCYC 1 cut(s) 166
FspBI CTAG 2 cut(s) 27, 42
GsaI CCCAGC 1 cut(s) 389
HaeIII GGCC 1 cut(s) 22
Hin1II CATG 3 cut(s) 59, 160, 265
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HinfI GANTC 1 cut(s) 171
HphI GGTGA 1 cut(s) 401
Hpy166II GTNNAC 1 cut(s) 217
Hpy188I TCNGA 1 cut(s) 361
Hpy188III TCNNGA 3 cut(s) 175, 416, 478
Hpy8I GTNNAC 1 cut(s) 217
HpyAV CCTTC 2 cut(s) 33, 106
HpyCH4III ACNGT 1 cut(s) 446
HpyCH4V TGCA 2 cut(s) 209, 377
HpyF10VI GCNNNNNNNGC 2 cut(s) 76, 161
HpyF3I CTNAG 2 cut(s) 121, 465
Hsp92II CATG 3 cut(s) 59, 160, 265
LguI GCTCTTC 1 cut(s) 180
LpnPI CCDG 3 cut(s) 108, 371, 463
LweI GCATC 1 cut(s) 124
MaeI CTAG 2 cut(s) 27, 42
MboII GAAGA 3 cut(s) 197, 382, 499
MhlI GDGCHC 1 cut(s) 166
MluCI AATT 2 cut(s) 192, 394
MnlI CCTC 7 cut(s) 11, 20, 69, 153, 292, 421, 460
MroXI GAANNNNTTC 1 cut(s) 314
MseI TTAA 4 cut(s) 62, 87, 195, 366
MslI CAYNNNNRTG 1 cut(s) 479
Mva1269I GAATGC 1 cut(s) 314
MwoI GCNNNNNNNGC 2 cut(s) 76, 161
NdeI CATATG 1 cut(s) 499
NlaIII CATG 3 cut(s) 59, 160, 265
NlaIV GGNNCC 1 cut(s) 235
PciSI GCTCTTC 1 cut(s) 180
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 1 cut(s) 314
PdmI GAANNNNTTC 1 cut(s) 314
PfeI GAWTC 1 cut(s) 171
PspFI CCCAGC 1 cut(s) 385
PspN4I GGNNCC 1 cut(s) 235
PspPI GGNCC 1 cut(s) 20
RseI CAYNNNNRTG 1 cut(s) 479
SapI GCTCTTC 1 cut(s) 180
SaqAI TTAA 4 cut(s) 62, 87, 195, 366
Sau96I GGNCC 1 cut(s) 20
SduI GDGCHC 1 cut(s) 166
SetI ASST 2 cut(s) 43, 387
SfaNI GCATC 1 cut(s) 124
SmiMI CAYNNNNRTG 1 cut(s) 479
Sse9I AATT 2 cut(s) 192, 394
SspMI CTAG 2 cut(s) 27, 42
TaaI ACNGT 1 cut(s) 446
TaqI TCGA 3 cut(s) 99, 108, 174
TaqII GACCGA 1 cut(s) 453
TasI AATT 2 cut(s) 192, 394
TfiI GAWTC 1 cut(s) 171
Tru1I TTAA 4 cut(s) 62, 87, 195, 366
Tru9I TTAA 4 cut(s) 62, 87, 195, 366
TscAI CASTG 2 cut(s) 118, 406
TspDTI ATGAA 3 cut(s) 323, 463, 500
TspGWI ACGGA 1 cut(s) 240
TspRI CASTG 2 cut(s) 118, 406
XapI RAATTY 1 cut(s) 394
XcmI CCANNNNNNNNNTGG 1 cut(s) 338
XmnI GAANNNNTTC 1 cut(s) 314
XspI CTAG 2 cut(s) 27, 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.