Rorug02G0429400

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000202
Physical Location & Seq
Forward (+)
55019895 .. 55023754
3860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0429400.1

Sequence Viewer

Length: 1533 bp
ATGATTTACAAGGGAATTTACCATCTTTTCTATCAATATAATCCCAAAGGTGTAGTTTGGGGCAACATTGTTTGGGCACATTCAACATCAACCGATCTTGTCAACTGGATCCCACATGAAGCTGCTATCTACCCATCACAGCCGTCCGATATCAACGGCTGCTGGTCGGGGTCAGCTACAATCCTTCCCGGAGGCAAGCCGGCCATGTTATACACTGGAATCAATCCCCAAAACCAACAAGTTCAAAACTTGGCATTTCCTAAAAACCTCTCAGACCCTTTTCTTAGGGAATGGGTTAAGGTCCCACAAAACCCACTAATGGCTCCAACACAAGCTAACCAAGTCAATGCTAGCTCATTTAGGGATCCAACCACTGCATGGCTAGGGCCAGACAAGAGATGGAGGTTAATCATTGGAAGCAAAAGGGACCAAAGGGGATTAGCTATACTCTACAGAAGCAAAGATTTCATGCATTGGACTAAGGCCAAACACCCACTTCATTCAAACGAGAAAAATGGAATGTGGGAGTGCCCAGATTTTTTCCCAATTTCAAAGACTAGTTCAGTTGGTCTTGACACATCAACAAATGGTCCTAATGTTAAGCATGTGCTCAAGGTTAGCTTGGACAACACCAGGAAAGAGTACTATACAATTGGTACATATAACATCAGCAAGGATATCTATATTCCAGATAAGGGATCAGTTGAGAGTGATTTCGGTTTGAGATATGATTATGGTAAGTTTTATGCTTCAAAAACCTTCTTTGACAGTGCTAAGAACCGCAGGATCTTGTGGGGTTGGATTAATGAATCCTCAAGTGTCAATGGTGACGTCAAGAAAGGATGGTCTGGGCTCCAGGCAATTCCAAGGACCATTGTGCTTGACAAGTCTGGCAAACAATTGGTGCAATGGCCAATTGTAGAGCTTGAAAAACTTAGAACAAAGGAGGTCACGTTGCCAAGCACTGTACTTAAGGGAGGATCACTTCATGAAGTATTTGGTGTCACAGCAGCACAAGCTGATGTAGAAGTCGCATTCGAGATAAGTGATTTCAAGAAAGCAGATGTGTTGGATCCAAGTTGGACTAATCCACAAATTTTGTGCAGCAAAAAGGGTGCCTCGGTGAAAGGCGGTCTTGGACCATTTGGATTGTTGACTTTGGCTTCAAAGGACTTGAAAGAAACCACAGCAGTCTTCTACAGAATTTTCAAGTCTCAAAACAATTACAAGAAATATGTGGTGCTTATGTGCAGTGACCAAAGCAGGTCTTCCCTAAATCAAGATAATGATATGACCACTTATGGGGCATTTGTAAATGTGGATCCTGTTCATGAGAAGCTGTCACTAAGAAGCTTGATTGATCACTCTATAGTGGAGAGCTTTGGTGGAGAAGGCAAGGCGTGCATAACAGCCAGGGTTTATCCGACATTGGCCGTTGATGGTGATGCCCACTTATATGCTTTCAATTATGGAAGTGAGAGTGTCAAAATCGCAGGAAGTGCGTGGAGCTTGAAAACTGCTAAAATAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

510

Amino Acids

56.9

Weight (kDa)

9.16

Isoelectric Point (pI)

29.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_32N PF00251 1 - 305 5.5e-96 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C PF08244 308 - 494 1.5e-23 Glycosyl hydrolases family 32 C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 834
Acc36I ACCTGC 1 cut(s) 1254
AccB1I GGYRCC 1 cut(s) 1115
AccB7I CCANNNNNTGG 1 cut(s) 378
AciI CCGC 2 cut(s) 781, 1131
AcoI YGGCCR 3 cut(s) 201, 911, 1431
AcsI RAATTY 3 cut(s) 15, 1095, 1203
AcyI GRCGYC 1 cut(s) 831
AfaI GTAC 3 cut(s) 644, 658, 969
AfiI CCNNNNNNNGG 4 cut(s) 319, 378, 695, 1302
AflII CTTAAG 1 cut(s) 971
AhlI ACTAGT 1 cut(s) 557
AjnI CCWGG 3 cut(s) 632, 855, 1412
Alw21I GWGCWC 1 cut(s) 612
Alw26I GTCTC 1 cut(s) 1218
AoxI GGCC 5 cut(s) 201, 386, 483, 911, 1431
ApeKI GCWGC 4 cut(s) 122, 159, 1010, 1104
ApoI RAATTY 3 cut(s) 15, 1095, 1203
AseI ATTAAT 1 cut(s) 804
AspS9I GGNCC 6 cut(s) 301, 386, 427, 590, 870, 1139
AsuC2I CCSGG 1 cut(s) 189
AsuHPI GGTGA 3 cut(s) 839, 1135, 1454
AsuNHI GCTAGC 1 cut(s) 350
AvaII GGWCC 5 cut(s) 301, 427, 590, 870, 1139
BaeGI GKGCMC 2 cut(s) 79, 533
BalI TGGCCA 1 cut(s) 913
BamHI GGATCC 4 cut(s) 108, 364, 1072, 1321
BanI GGYRCC 1 cut(s) 1115
BanII GRGCYC 1 cut(s) 855
BbsI GAAGAC 2 cut(s) 1186, 1260
Bbv12I GWGCWC 1 cut(s) 612
BbvI GCAGC 4 cut(s) 109, 146, 1022, 1116
BccI CCATC 5 cut(s) 30, 142, 393, 837, 1433
BceAI ACGGC 3 cut(s) 127, 172, 1418
BciT130I CCWGG 3 cut(s) 634, 857, 1414
BclI TGATCA 1 cut(s) 1360
BcnI CCSGG 1 cut(s) 189
BcoDI GTCTC 1 cut(s) 1218
BcuI ACTAGT 1 cut(s) 557
BfaI CTAG 3 cut(s) 351, 383, 558
BfmI CTRYAG 3 cut(s) 451, 1198, 1368
BfrI CTTAAG 1 cut(s) 971
BfuAI ACCTGC 1 cut(s) 1254
BisI GCNGC 4 cut(s) 123, 160, 1011, 1105
BlsI GCNGC 4 cut(s) 124, 161, 1012, 1106
BmcAI AGTACT 1 cut(s) 644
Bme1390I CCNGG 4 cut(s) 189, 634, 857, 1414
Bme18I GGWCC 5 cut(s) 301, 427, 590, 870, 1139
BmgT120I GGNCC 6 cut(s) 301, 386, 427, 590, 870, 1139
BmiI GGNNCC 9 cut(s) 110, 303, 324, 366, 428, 854, 1074, 1117, 1323
BmrFI CCNGG 4 cut(s) 189, 634, 857, 1414
BmsI GCATC 1 cut(s) 1435
BmtI GCTAGC 1 cut(s) 354
BpiI GAAGAC 2 cut(s) 1186, 1260
BpmI CTGGAG 1 cut(s) 839
BpuEI CTTGAG 2 cut(s) 596, 799
BpuMI CCSGG 1 cut(s) 189
BsaHI GRCGYC 1 cut(s) 831
BsaJI CCNNGG 3 cut(s) 866, 1119, 1413
BsaXI ACNNNNNCTCC 2 cut(s) 938, 968
Bsc4I CCNNNNNNNGG 4 cut(s) 319, 378, 695, 1302
Bse118I RCCGGY 1 cut(s) 199
Bse1I ACTGG 2 cut(s) 110, 220
Bse3DI GCAATG 1 cut(s) 914
BseBI CCWGG 3 cut(s) 634, 857, 1414
BseDI CCNNGG 3 cut(s) 866, 1119, 1413
BseGI GGATG 1 cut(s) 848
BseLI CCNNNNNNNGG 4 cut(s) 319, 378, 695, 1302
BseMI GCAATG 1 cut(s) 914
BseMII CTCAG 1 cut(s) 285
BseNI ACTGG 2 cut(s) 110, 220
BseSI GKGCMC 2 cut(s) 79, 533
BseXI GCAGC 4 cut(s) 109, 146, 1022, 1116
BsgI GTGCAG 2 cut(s) 1123, 1270
BshFI GGCC 5 cut(s) 203, 388, 485, 913, 1433
BshNI GGYRCC 1 cut(s) 1115
BsiHKAI GWGCWC 1 cut(s) 612
BsiSI CCGG 2 cut(s) 189, 200
BslFI GGGAC 2 cut(s) 287, 440
BslI CCNNNNNNNGG 4 cut(s) 319, 378, 695, 1302
BsmAI GTCTC 1 cut(s) 1218
BsmFI GGGAC 2 cut(s) 287, 440
BsmI GAATGC 1 cut(s) 1034
BsnI GGCC 5 cut(s) 203, 388, 485, 913, 1433
Bsp1286I GDGCHC 4 cut(s) 79, 533, 612, 855
Bsp143I GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
BspACI CCGC 2 cut(s) 781, 1131
BspANI GGCC 5 cut(s) 203, 388, 485, 913, 1433
BspCNI CTCAG 1 cut(s) 284
BspHI TCATGA 2 cut(s) 988, 1330
BspLI GGNNCC 9 cut(s) 110, 303, 324, 366, 428, 854, 1074, 1117, 1323
BspMI ACCTGC 1 cut(s) 1254
BspOI GCTAGC 1 cut(s) 354
BspT107I GGYRCC 1 cut(s) 1115
BspTI CTTAAG 1 cut(s) 971
BsrDI GCAATG 1 cut(s) 914
BsrFI RCCGGY 1 cut(s) 199
BsrI ACTGG 2 cut(s) 110, 220
BssAI RCCGGY 1 cut(s) 199
BssECI CCNNGG 3 cut(s) 866, 1119, 1413
BssMI GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
BssNI GRCGYC 1 cut(s) 831
BssT1I CCWWGG 1 cut(s) 866
Bst2UI CCWGG 3 cut(s) 634, 857, 1414
Bst4CI ACNGT 2 cut(s) 770, 967
BstACI GRCGYC 1 cut(s) 831
BstAFI CTTAAG 1 cut(s) 971
BstAPI GCANNNNNTGC 2 cut(s) 1401, 1499
BstC8I GCNNGC 4 cut(s) 197, 201, 352, 1402
BstDEI CTNAG 6 cut(s) 271, 284, 480, 774, 935, 1346
BstF5I GGATG 1 cut(s) 848
BstKTI GATC 9 cut(s) 97, 111, 367, 701, 789, 983, 1075, 1324, 1363
BstMAI GTCTC 1 cut(s) 1218
BstMBI GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
BstMWI GCNNNNNNNGC 3 cut(s) 1016, 1401, 1499
BstNI CCWGG 3 cut(s) 634, 857, 1414
BstNSI RCATGY 1 cut(s) 608
BstSCI CCNGG 4 cut(s) 187, 632, 855, 1412
BstSFI CTRYAG 3 cut(s) 451, 1198, 1368
BstSLI GKGCMC 2 cut(s) 79, 533
BstV1I GCAGC 4 cut(s) 109, 146, 1022, 1116
BstV2I GAAGAC 2 cut(s) 1186, 1260
BstX2I RGATCY 5 cut(s) 108, 364, 786, 1072, 1321
BstYI RGATCY 5 cut(s) 108, 364, 786, 1072, 1321
BsuRI GGCC 5 cut(s) 203, 388, 485, 913, 1433
BtsCI GGATG 1 cut(s) 848
BtsI GCAGTG 2 cut(s) 372, 1258
BtsIMutI CAGTG 5 cut(s) 213, 372, 775, 963, 1258
BveI ACCTGC 1 cut(s) 1254
Cac8I GCNNGC 4 cut(s) 197, 201, 352, 1402
CciI TCATGA 2 cut(s) 988, 1330
Cfr10I RCCGGY 1 cut(s) 199
Cfr13I GGNCC 6 cut(s) 301, 386, 427, 590, 870, 1139
Csp6I GTAC 3 cut(s) 643, 657, 968
CspCI CAANNNNNGTGG 2 cut(s) 1080, 1115
CviAII CATG 7 cut(s) 116, 205, 378, 469, 605, 989, 1331
CviQI GTAC 3 cut(s) 643, 657, 968
DdeI CTNAG 6 cut(s) 271, 284, 480, 774, 935, 1346
DpnI GATC 9 cut(s) 96, 110, 366, 700, 788, 982, 1074, 1323, 1362
DpnII GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
EaeI YGGCCR 3 cut(s) 201, 911, 1431
Eco130I CCWWGG 1 cut(s) 866
Eco24I GRGCYC 1 cut(s) 855
Eco32I GATATC 2 cut(s) 151, 679
Eco47I GGWCC 5 cut(s) 301, 427, 590, 870, 1139
EcoO109I RGGNCCY 1 cut(s) 301
EcoRII CCWGG 3 cut(s) 632, 855, 1412
EcoRV GATATC 2 cut(s) 151, 679
EcoT14I CCWWGG 1 cut(s) 866
EcoT22I ATGCAT 1 cut(s) 474
EcoT38I GRGCYC 1 cut(s) 855
ErhI CCWWGG 1 cut(s) 866
FaeI CATG 7 cut(s) 119, 208, 381, 472, 608, 992, 1334
FalI AAGNNNNNCTT 6 cut(s) 605, 637, 1119, 1151, 1252, 1284
FaqI GGGAC 2 cut(s) 287, 440
FatI CATG 7 cut(s) 115, 204, 377, 468, 604, 988, 1330
FbaI TGATCA 1 cut(s) 1360
Fnu4HI GCNGC 4 cut(s) 123, 160, 1011, 1105
FokI GGATG 1 cut(s) 855
FriOI GRGCYC 1 cut(s) 855
Fsp4HI GCNGC 4 cut(s) 123, 160, 1011, 1105
FspBI CTAG 3 cut(s) 351, 383, 558
GluI GCNGC 4 cut(s) 123, 160, 1011, 1105
GsuI CTGGAG 1 cut(s) 839
HaeIII GGCC 5 cut(s) 203, 388, 485, 913, 1433
HapII CCGG 2 cut(s) 189, 200
Hin1I GRCGYC 1 cut(s) 831
Hin1II CATG 7 cut(s) 119, 208, 381, 472, 608, 992, 1334
HincII GTYRAC 2 cut(s) 103, 1155
HindII GTYRAC 2 cut(s) 103, 1155
HindIII AAGCTT 1 cut(s) 1351
HinfI GANTC 2 cut(s) 219, 809
HpaII CCGG 2 cut(s) 189, 200
HphI GGTGA 3 cut(s) 839, 1135, 1454
Hpy166II GTNNAC 2 cut(s) 103, 1155
Hpy188I TCNGA 3 cut(s) 148, 274, 1425
Hpy188III TCNNGA 8 cut(s) 572, 689, 835, 989, 1039, 1054, 1280, 1331
Hpy8I GTNNAC 2 cut(s) 103, 1155
HpyAV CCTTC 3 cut(s) 194, 769, 1385
HpyCH4III ACNGT 2 cut(s) 770, 967
HpyCH4IV ACGT 2 cut(s) 831, 953
HpyCH4V TGCA 6 cut(s) 377, 472, 907, 1104, 1251, 1404
HpyF10VI GCNNNNNNNGC 3 cut(s) 1016, 1401, 1499
HpyF3I CTNAG 6 cut(s) 271, 284, 480, 774, 935, 1346
HpySE526I ACGT 2 cut(s) 831, 953
Hsp92I GRCGYC 1 cut(s) 831
Hsp92II CATG 7 cut(s) 119, 208, 381, 472, 608, 992, 1334
KroI GCCGGC 1 cut(s) 199
KroNI GCCGGC 1 cut(s) 201
Ksp22I TGATCA 1 cut(s) 1360
Kzo9I GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
LmnI GCTCC 3 cut(s) 328, 858, 1506
Lsp1109I GCAGC 4 cut(s) 109, 146, 1022, 1116
LweI GCATC 1 cut(s) 1435
MaeI CTAG 3 cut(s) 351, 383, 558
MaeII ACGT 2 cut(s) 831, 953
MaeIII GTNAC 5 cut(s) 827, 949, 1003, 1253, 1341
MalI GATC 9 cut(s) 96, 110, 366, 700, 788, 982, 1074, 1323, 1362
MboI GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
MboII GAAGA 2 cut(s) 1186, 1260
MfeI CAATTG 3 cut(s) 651, 899, 915
MflI RGATCY 5 cut(s) 108, 364, 786, 1072, 1321
MhlI GDGCHC 4 cut(s) 79, 533, 612, 855
MlsI TGGCCA 1 cut(s) 913
MluNI TGGCCA 1 cut(s) 913
MmeI TCCRAC 6 cut(s) 350, 392, 779, 1050, 1061, 1448
MnlI CCTC 7 cut(s) 185, 278, 396, 823, 940, 971, 1129
Mox20I TGGCCA 1 cut(s) 913
Mph1103I ATGCAT 1 cut(s) 474
MroNI GCCGGC 1 cut(s) 199
MscI TGGCCA 1 cut(s) 913
MseI TTAA 5 cut(s) 297, 407, 600, 804, 972
MslI CAYNNNNRTG 1 cut(s) 1455
Msp20I TGGCCA 1 cut(s) 913
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 2 cut(s) 189, 200
MspR9I CCNGG 4 cut(s) 189, 634, 857, 1414
MunI CAATTG 3 cut(s) 651, 899, 915
Mva1269I GAATGC 1 cut(s) 1034
MvaI CCWGG 3 cut(s) 634, 857, 1414
MwoI GCNNNNNNNGC 3 cut(s) 1016, 1401, 1499
NaeI GCCGGC 1 cut(s) 201
NciI CCSGG 1 cut(s) 189
NdeII GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
NgoMIV GCCGGC 1 cut(s) 199
NheI GCTAGC 1 cut(s) 350
NlaIII CATG 7 cut(s) 119, 208, 381, 472, 608, 992, 1334
NlaIV GGNNCC 9 cut(s) 110, 303, 324, 366, 428, 854, 1074, 1117, 1323
NmuCI GTSAC 5 cut(s) 827, 949, 1003, 1253, 1341
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 1 cut(s) 608
PagI TCATGA 2 cut(s) 988, 1330
PctI GAATGC 1 cut(s) 1034
PdiI GCCGGC 1 cut(s) 201
PfeI GAWTC 2 cut(s) 219, 809
PflMI CCANNNNNTGG 1 cut(s) 378
PfoI TCCNGGA 1 cut(s) 187
PkrI GCNGC 4 cut(s) 124, 161, 1012, 1106
PpuMI RGGWCCY 1 cut(s) 301
PshBI ATTAAT 1 cut(s) 804
Psp5II RGGWCCY 1 cut(s) 301
Psp6I CCWGG 3 cut(s) 632, 855, 1412
PspGI CCWGG 3 cut(s) 632, 855, 1412
PspN4I GGNNCC 9 cut(s) 110, 303, 324, 366, 428, 854, 1074, 1117, 1323
PspPI GGNCC 6 cut(s) 301, 386, 427, 590, 870, 1139
PspPPI RGGWCCY 1 cut(s) 301
PsuI RGATCY 5 cut(s) 108, 364, 786, 1072, 1321
RsaI GTAC 3 cut(s) 644, 658, 969
RsaNI GTAC 3 cut(s) 643, 657, 968
RseI CAYNNNNRTG 1 cut(s) 1455
SaqAI TTAA 5 cut(s) 297, 407, 600, 804, 972
SatI GCNGC 4 cut(s) 123, 160, 1011, 1105
Sau3AI GATC 9 cut(s) 94, 108, 364, 698, 786, 980, 1072, 1321, 1360
Sau96I GGNCC 6 cut(s) 301, 386, 427, 590, 870, 1139
ScaI AGTACT 1 cut(s) 644
ScrFI CCNGG 4 cut(s) 189, 634, 857, 1414
SduI GDGCHC 4 cut(s) 79, 533, 612, 855
SfaNI GCATC 1 cut(s) 1435
SfcI CTRYAG 3 cut(s) 451, 1198, 1368
SinI GGWCC 5 cut(s) 301, 427, 590, 870, 1139
SmiMI CAYNNNNRTG 1 cut(s) 1455
SmlI CTYRAG 3 cut(s) 611, 814, 971
SmoI CTYRAG 3 cut(s) 611, 814, 971
SpeI ACTAGT 1 cut(s) 557
SsiI CCGC 2 cut(s) 781, 1131
SspMI CTAG 3 cut(s) 351, 383, 558
StyD4I CCNGG 4 cut(s) 187, 632, 855, 1412
StyI CCWWGG 1 cut(s) 866
TaaI ACNGT 2 cut(s) 770, 967
TaiI ACGT 2 cut(s) 834, 956
TaqI TCGA 1 cut(s) 1038
TatI WGTACW 2 cut(s) 642, 967
TfiI GAWTC 2 cut(s) 219, 809
Tru1I TTAA 5 cut(s) 297, 407, 600, 804, 972
Tru9I TTAA 5 cut(s) 297, 407, 600, 804, 972
TscAI CASTG 5 cut(s) 220, 379, 775, 970, 1258
TseFI GTSAC 5 cut(s) 827, 949, 1003, 1253, 1341
TseI GCWGC 4 cut(s) 122, 159, 1010, 1104
Tsp45I GTSAC 5 cut(s) 827, 949, 1003, 1253, 1341
TspDTI ATGAA 7 cut(s) 132, 457, 488, 822, 977, 1005, 1319
TspRI CASTG 5 cut(s) 220, 379, 775, 970, 1258
Van91I CCANNNNNTGG 1 cut(s) 378
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 5 cut(s) 301, 427, 590, 870, 1139
VspI ATTAAT 1 cut(s) 804
XapI RAATTY 3 cut(s) 15, 1095, 1203
XceI RCATGY 1 cut(s) 608
XcmI CCANNNNNNNNNTGG 2 cut(s) 375, 396
XspI CTAG 3 cut(s) 351, 383, 558
ZraI GACGTC 1 cut(s) 832
ZrmI AGTACT 1 cut(s) 644
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.