RchiOBHm_Chr7g0230141

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000202
Physical Location & Seq
Forward (+)
53593351 .. 53601532
8182 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20619

Sequence Viewer

Length: 315 bp
ATGGAACGCTTATGCAGCGGATTGCCCAAGCATAATGGTGGTGTTGTCATTGTCACTACTAGATTGAAGGAAGTGGCTCAAAAGCTGGGGAAACAACATAGATTGCAGCTGGTTCATGTTAAGCCTCTGGACAGAGAGATTTGCGGGCATATATTTGAGGAGCAGGCTTATTCCATTAGAAAAAGTTCAAACTTCTCATGTGATGAAGCTACGAGAAAGATGGAGGAACTCAAGGATCAGTGCCATGGTCTACCGTTGGTTGCGAAGACGATAGCAAATGCTTTTGCAGTGGGATTTTGGAGGCGACGGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

104

Amino Acids

11.87

Weight (kDa)

9.59

Isoelectric Point (pI)

48.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 250
AciI CCGC 2 cut(s) 18, 144
AclWI GGATC 1 cut(s) 243
AgsI TTSAA 2 cut(s) 67, 189
AluBI AGCT 3 cut(s) 85, 109, 209
AluI AGCT 3 cut(s) 85, 109, 209
AlwI GGATC 1 cut(s) 243
ApeKI GCWGC 2 cut(s) 15, 106
Asp700I GAANNNNTTC 1 cut(s) 184
BbsI GAAGAC 1 cut(s) 272
BbvI GCAGC 2 cut(s) 27, 118
BccI CCATC 1 cut(s) 214
BfaI CTAG 1 cut(s) 60
BisI GCNGC 2 cut(s) 16, 107
BlsI GCNGC 2 cut(s) 17, 108
BpiI GAAGAC 1 cut(s) 272
BpuEI CTTGAG 1 cut(s) 215
BsaJI CCNNGG 1 cut(s) 244
BseDI CCNNGG 1 cut(s) 244
BseRI GAGGAG 1 cut(s) 173
BseXI GCAGC 2 cut(s) 27, 118
BseYI CCCAGC 1 cut(s) 85
Bsp143I GATC 2 cut(s) 235, 309
Bsp19I CCATGG 1 cut(s) 244
BspACI CCGC 2 cut(s) 18, 144
BspPI GGATC 1 cut(s) 243
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 2 cut(s) 235, 309
BssT1I CCWWGG 1 cut(s) 244
Bst4CI ACNGT 1 cut(s) 255
BstC8I GCNNGC 2 cut(s) 146, 165
BstDSI CCRYGG 1 cut(s) 244
BstKTI GATC 2 cut(s) 238, 312
BstMBI GATC 2 cut(s) 235, 309
BstMWI GCNNNNNNNGC 1 cut(s) 15
BstV1I GCAGC 2 cut(s) 27, 118
BstV2I GAAGAC 1 cut(s) 272
BstX2I RGATCY 1 cut(s) 309
BstYI RGATCY 1 cut(s) 309
BtgI CCRYGG 1 cut(s) 244
BtsI GCAGTG 1 cut(s) 294
BtsIMutI CAGTG 2 cut(s) 245, 294
Cac8I GCNNGC 2 cut(s) 146, 165
CviAII CATG 3 cut(s) 116, 198, 245
CviJI RGCY 6 cut(s) 77, 85, 109, 124, 167, 209
CviKI_1 RGCY 6 cut(s) 77, 85, 109, 124, 167, 209
DpnI GATC 2 cut(s) 237, 311
DpnII GATC 2 cut(s) 235, 309
Eco130I CCWWGG 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 244
FaeI CATG 3 cut(s) 119, 201, 248
FaiI YATR 8 cut(s) 13, 33, 99, 117, 150, 152, 199, 246
FatI CATG 3 cut(s) 115, 197, 244
FauI CCCGC 1 cut(s) 137
FblI GTMKAC 1 cut(s) 250
Fnu4HI GCNGC 2 cut(s) 16, 107
Fsp4HI GCNGC 2 cut(s) 16, 107
FspBI CTAG 1 cut(s) 60
GluI GCNGC 2 cut(s) 16, 107
GsaI CCCAGC 1 cut(s) 89
Hin1II CATG 3 cut(s) 119, 201, 248
Hpy166II GTNNAC 1 cut(s) 251
Hpy188I TCNGA 1 cut(s) 314
Hpy188III TCNNGA 1 cut(s) 128
Hpy8I GTNNAC 1 cut(s) 251
Hpy99I CGWCG 1 cut(s) 309
HpyAV CCTTC 1 cut(s) 61
HpyCH4III ACNGT 1 cut(s) 255
HpyCH4V TGCA 3 cut(s) 15, 106, 287
HpyF10VI GCNNNNNNNGC 1 cut(s) 15
Hsp92II CATG 3 cut(s) 119, 201, 248
Kzo9I GATC 2 cut(s) 235, 309
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 4 cut(s) 71, 95, 113, 149
Lsp1109I GCAGC 2 cut(s) 27, 118
MaeI CTAG 1 cut(s) 60
MaeIII GTNAC 1 cut(s) 52
MalI GATC 2 cut(s) 237, 311
MboI GATC 2 cut(s) 235, 309
MboII GAAGA 1 cut(s) 277
MflI RGATCY 1 cut(s) 309
MnlI CCTC 4 cut(s) 135, 151, 217, 294
MroXI GAANNNNTTC 1 cut(s) 184
MseI TTAA 1 cut(s) 120
MslI CAYNNNNRTG 1 cut(s) 36
MspA1I CMGCKG 2 cut(s) 18, 109
MwoI GCNNNNNNNGC 1 cut(s) 15
NcoI CCATGG 1 cut(s) 244
NdeII GATC 2 cut(s) 235, 309
NlaIII CATG 3 cut(s) 119, 201, 248
NmuCI GTSAC 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 184
PkrI GCNGC 2 cut(s) 17, 108
PspFI CCCAGC 1 cut(s) 85
PsuI RGATCY 1 cut(s) 309
PvuII CAGCTG 1 cut(s) 109
RseI CAYNNNNRTG 1 cut(s) 36
SaqAI TTAA 1 cut(s) 120
SatI GCNGC 2 cut(s) 16, 107
Sau3AI GATC 2 cut(s) 235, 309
SetI ASST 3 cut(s) 87, 111, 211
SmiMI CAYNNNNRTG 1 cut(s) 36
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
SsiI CCGC 2 cut(s) 18, 144
SspMI CTAG 1 cut(s) 60
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 1 cut(s) 255
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TscAI CASTG 2 cut(s) 245, 294
TseFI GTSAC 1 cut(s) 52
TseI GCWGC 2 cut(s) 15, 106
Tsp45I GTSAC 1 cut(s) 52
TspDTI ATGAA 2 cut(s) 104, 219
TspRI CASTG 2 cut(s) 245, 294
XmiI GTMKAC 1 cut(s) 250
XmnI GAANNNNTTC 1 cut(s) 184
XspI CTAG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.