Rmu_sc0000851.1_g000003

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000851.1
Physical Location & Seq
Forward (+)
12033 .. 12458
426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000851.1_g000003.1.cds

Sequence Viewer

Length: 426 bp
atggaacgcttattcagcggattgcccaagcataatggtggtgttgtcattgtcactactagattgaaggaagtggctcaaaagctggggaaacaacatagatttcatctggttcatgttaagcctctggacagagagatttgcgggcatatatttgaggagcaggcttattccattagaaaaagttcaaacttctcacgtgatgaagctacgagaaagatggaggaactcaaggatcagtgccatggtctaccgttggttgcgaagacgatagcaaatgcttttgcagtgggatttggaggcgacggatctgaacagagaggtggtgatcacggggaggaagtaggaatttttgaagaattagttgaagacgaccagggttcaagaattgctgacctgatccatcatgttcaagaatcttcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

141

Amino Acids

15.71

Weight (kDa)

5.97

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 250
AciI CCGC 2 cut(s) 18, 144
AclWI GGATC 3 cut(s) 243, 316, 394
AcsI RAATTY 1 cut(s) 348
AcvI CACGTG 1 cut(s) 200
AgsI TTSAA 6 cut(s) 67, 189, 356, 368, 384, 413
AjnI CCWGG 1 cut(s) 375
AluBI AGCT 2 cut(s) 85, 209
AluI AGCT 2 cut(s) 85, 209
AlwI GGATC 3 cut(s) 243, 316, 394
ApoI RAATTY 1 cut(s) 348
Asp700I GAANNNNTTC 1 cut(s) 184
AsuHPI GGTGA 1 cut(s) 338
BbrPI CACGTG 1 cut(s) 200
BbsI GAAGAC 2 cut(s) 272, 375
BccI CCATC 2 cut(s) 214, 411
BciT130I CCWGG 1 cut(s) 377
BclI TGATCA 1 cut(s) 328
BfaI CTAG 1 cut(s) 60
Bme1390I CCNGG 1 cut(s) 377
BmrFI CCNGG 1 cut(s) 377
BpiI GAAGAC 2 cut(s) 272, 375
BpuEI CTTGAG 1 cut(s) 215
BsaAI YACGTR 1 cut(s) 200
BsaJI CCNNGG 2 cut(s) 244, 376
BseBI CCWGG 1 cut(s) 377
BseDI CCNNGG 2 cut(s) 244, 376
BseRI GAGGAG 1 cut(s) 173
BseYI CCCAGC 1 cut(s) 85
Bsp143I GATC 4 cut(s) 235, 308, 328, 399
Bsp19I CCATGG 1 cut(s) 244
BspACI CCGC 2 cut(s) 18, 144
BspPI GGATC 3 cut(s) 243, 316, 394
BssECI CCNNGG 2 cut(s) 244, 376
BssMI GATC 4 cut(s) 235, 308, 328, 399
BssT1I CCWWGG 1 cut(s) 244
Bst2UI CCWGG 1 cut(s) 377
Bst4CI ACNGT 1 cut(s) 255
BstBAI YACGTR 1 cut(s) 200
BstC8I GCNNGC 2 cut(s) 146, 165
BstDSI CCRYGG 1 cut(s) 244
BstKTI GATC 4 cut(s) 238, 311, 331, 402
BstMBI GATC 4 cut(s) 235, 308, 328, 399
BstMWI GCNNNNNNNGC 1 cut(s) 15
BstNI CCWGG 1 cut(s) 377
BstSCI CCNGG 1 cut(s) 375
BstV2I GAAGAC 2 cut(s) 272, 375
BstX2I RGATCY 1 cut(s) 308
BstYI RGATCY 1 cut(s) 308
BtgI CCRYGG 1 cut(s) 244
BtsI GCAGTG 1 cut(s) 294
BtsIMutI CAGTG 2 cut(s) 245, 294
Cac8I GCNNGC 2 cut(s) 146, 165
CviAII CATG 3 cut(s) 116, 245, 407
CviJI RGCY 5 cut(s) 77, 85, 124, 167, 209
CviKI_1 RGCY 5 cut(s) 77, 85, 124, 167, 209
DpnI GATC 4 cut(s) 237, 310, 330, 401
DpnII GATC 4 cut(s) 235, 308, 328, 399
Eco130I CCWWGG 1 cut(s) 244
Eco72I CACGTG 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 375
EcoT14I CCWWGG 1 cut(s) 244
ErhI CCWWGG 1 cut(s) 244
FaeI CATG 3 cut(s) 119, 248, 410
FaiI YATR 7 cut(s) 33, 99, 117, 150, 152, 246, 408
FatI CATG 3 cut(s) 115, 244, 406
FauI CCCGC 1 cut(s) 137
FbaI TGATCA 1 cut(s) 328
FblI GTMKAC 1 cut(s) 250
FspBI CTAG 1 cut(s) 60
GsaI CCCAGC 1 cut(s) 89
Hin1II CATG 3 cut(s) 119, 248, 410
HinfI GANTC 1 cut(s) 416
HphI GGTGA 1 cut(s) 338
Hpy166II GTNNAC 1 cut(s) 251
Hpy188I TCNGA 1 cut(s) 313
Hpy188III TCNNGA 4 cut(s) 128, 384, 413, 423
Hpy8I GTNNAC 1 cut(s) 251
Hpy99I CGWCG 1 cut(s) 308
HpyAV CCTTC 1 cut(s) 61
HpyCH4III ACNGT 1 cut(s) 255
HpyCH4IV ACGT 1 cut(s) 199
HpyCH4V TGCA 1 cut(s) 287
HpyF10VI GCNNNNNNNGC 1 cut(s) 15
HpySE526I ACGT 1 cut(s) 199
Hsp92II CATG 3 cut(s) 119, 248, 410
Ksp22I TGATCA 1 cut(s) 328
Kzo9I GATC 4 cut(s) 235, 308, 328, 399
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 7 cut(s) 71, 95, 113, 149, 362, 389, 410
MaeI CTAG 1 cut(s) 60
MaeII ACGT 1 cut(s) 199
MaeIII GTNAC 1 cut(s) 52
MalI GATC 4 cut(s) 237, 310, 330, 401
MboI GATC 4 cut(s) 235, 308, 328, 399
MboII GAAGA 4 cut(s) 277, 368, 380, 411
MflI RGATCY 1 cut(s) 308
MluCI AATT 3 cut(s) 348, 359, 387
MnlI CCTC 6 cut(s) 135, 151, 217, 293, 314, 331
MroXI GAANNNNTTC 1 cut(s) 184
MseI TTAA 1 cut(s) 120
MslI CAYNNNNRTG 1 cut(s) 36
MspA1I CMGCKG 1 cut(s) 18
MspR9I CCNGG 1 cut(s) 377
MvaI CCWGG 1 cut(s) 377
MwoI GCNNNNNNNGC 1 cut(s) 15
NcoI CCATGG 1 cut(s) 244
NdeII GATC 4 cut(s) 235, 308, 328, 399
NlaIII CATG 3 cut(s) 119, 248, 410
NmuCI GTSAC 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 184
PfeI GAWTC 1 cut(s) 416
PmaCI CACGTG 1 cut(s) 200
PmlI CACGTG 1 cut(s) 200
Ppu21I YACGTR 1 cut(s) 200
Psp6I CCWGG 1 cut(s) 375
PspCI CACGTG 1 cut(s) 200
PspFI CCCAGC 1 cut(s) 85
PspGI CCWGG 1 cut(s) 375
PsuI RGATCY 1 cut(s) 308
RseI CAYNNNNRTG 1 cut(s) 36
SaqAI TTAA 1 cut(s) 120
Sau3AI GATC 4 cut(s) 235, 308, 328, 399
ScrFI CCNGG 1 cut(s) 377
SetI ASST 5 cut(s) 87, 202, 211, 325, 399
SmiMI CAYNNNNRTG 1 cut(s) 36
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 3 cut(s) 348, 359, 387
SsiI CCGC 2 cut(s) 18, 144
SspMI CTAG 1 cut(s) 60
StyD4I CCNGG 1 cut(s) 375
StyI CCWWGG 1 cut(s) 244
TaaI ACNGT 1 cut(s) 255
TaiI ACGT 1 cut(s) 202
TasI AATT 3 cut(s) 348, 359, 387
TfiI GAWTC 1 cut(s) 416
Tru1I TTAA 1 cut(s) 120
Tru9I TTAA 1 cut(s) 120
TscAI CASTG 2 cut(s) 245, 294
TseFI GTSAC 1 cut(s) 52
Tsp45I GTSAC 1 cut(s) 52
TspDTI ATGAA 3 cut(s) 95, 104, 219
TspGWI ACGGA 1 cut(s) 321
TspRI CASTG 2 cut(s) 245, 294
XapI RAATTY 1 cut(s) 348
XmiI GTMKAC 1 cut(s) 250
XmnI GAANNNNTTC 1 cut(s) 184
XspI CTAG 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.