Rmu_sc0002351.1_g000011

Diacylglycerol kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002351.1
OG0000202
Physical Location & Seq
Reverse (-)
29114 .. 31498
2385 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002351.1_g000011.1.cds

Sequence Viewer

Length: 870 bp
ctgctgcgtcggggactcggggcgttgcagcaggggctgggctgtgctgctccggcgcggtgtacggcagatcgatctagaacggcagccgggcgctggtgggcagctgcagacgcgggtggctggaggctgaagactgcagcagtgggggctggaggctgtagcgcggcctggagggctgggatcgagtggaggcgctgctgtttgactgcgagattcttcctaatttcatcgattcacaaagttgtggttactgttgcaaggccaggaatggcgttggatgttgctgaattcctgtggaacaagttcttgaagtctctagcagagatggagtctgaattagcaggtactattaccatccctttcttcgactcgataaaagatctcatgaaatgcttcaacgaaatcaaaggtgttatgaatgagatagatatcatgccggaaccatatacctactctaaaactattgatgtgctctacaagctcaacgatgcattggcggagtgccgagtgttcacacttgagtgcaaggaacttaataagaatgtgttaagcttctatgttccaagaattagatttgttggaaggatgaagactaaggtgaaggatataggggggcttctgaagccggatctgaaaatgggggcgccgcaagaagaaactggcaaatctccggagataatcgaacctaaagttttgtcaaaagtttttggatttgataaggaagccaagaagattgagaacccgctggtggggggtgctagttctagcagtacaagatttacggcaattggggtagtgggaattgctggtgcgggtaagacaacccttttttttttgagaagaaaattcctttatttagataagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DAGK_acc DAGK_cat NB-ARC

Protein Analysis

289

Amino Acids

31.79

Weight (kDa)

9.54

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 335
AccB1I GGYRCC 1 cut(s) 646
AccII CGCG 3 cut(s) 58, 116, 167
AccIII TCCGGA 1 cut(s) 673
AciI CCGC 7 cut(s) 58, 116, 167, 500, 650, 746, 815
AclWI GGATC 2 cut(s) 191, 639
AcsI RAATTY 2 cut(s) 290, 848
AcuI CTGAAG 2 cut(s) 152, 644
AcyI GRCGYC 1 cut(s) 647
AfaI GTAC 3 cut(s) 64, 349, 775
AfiI CCNNNNNNNGG 3 cut(s) 96, 751, 752
AgsI TTSAA 2 cut(s) 313, 400
AjnI CCWGG 2 cut(s) 170, 265
AleI CACNNNNGTG 1 cut(s) 523
AluBI AGCT 3 cut(s) 107, 484, 555
AluI AGCT 3 cut(s) 107, 484, 555
Alw21I GWGCWC 1 cut(s) 477
Alw26I GTCTC 1 cut(s) 321
AlwI GGATC 2 cut(s) 191, 639
AlwNI CAGNNNCTG 1 cut(s) 37
Ama87I CYCGRG 1 cut(s) 17
Aor13HI TCCGGA 1 cut(s) 673
AoxI GGCC 2 cut(s) 168, 263
ApeKI GCWGC 8 cut(s) 4, 28, 47, 86, 104, 107, 140, 198
ApoI RAATTY 2 cut(s) 290, 848
Asp700I GAANNNNTTC 2 cut(s) 305, 395
AspLEI GCGC 5 cut(s) 58, 96, 167, 198, 649
AsuC2I CCSGG 1 cut(s) 91
AsuHPI GGTGA 1 cut(s) 613
AvaI CYCGRG 1 cut(s) 17
BanI GGYRCC 1 cut(s) 646
BbsI GAAGAC 2 cut(s) 140, 599
Bbv12I GWGCWC 1 cut(s) 477
BbvI GCAGC 7 cut(s) 34, 40, 94, 98, 116, 152, 185
BccI CCATC 2 cut(s) 322, 365
BceAI ACGGC 3 cut(s) 81, 99, 801
BciT130I CCWGG 2 cut(s) 172, 267
BcnI CCSGG 1 cut(s) 91
BcoDI GTCTC 1 cut(s) 321
BfaI CTAG 4 cut(s) 78, 320, 762, 768
BfmI CTRYAG 3 cut(s) 108, 138, 160
BfoI RGCGCY 3 cut(s) 97, 199, 650
BfuAI ACCTGC 1 cut(s) 335
BglI GCCNNNNNGGC 1 cut(s) 176
BglII AGATCT 1 cut(s) 382
Bme1390I CCNGG 3 cut(s) 91, 172, 267
BmeT110I CYCGRG 1 cut(s) 17
BmiI GGNNCC 2 cut(s) 444, 648
BmrFI CCNGG 3 cut(s) 91, 172, 267
BmsI GCATC 1 cut(s) 481
BpiI GAAGAC 2 cut(s) 140, 599
BpmI CTGGAG 3 cut(s) 145, 174, 193
BpuEI CTTGAG 1 cut(s) 542
BpuMI CCSGG 1 cut(s) 91
Bsa29I ATCGAT 2 cut(s) 73, 233
BsaBI GATNNNNATC 1 cut(s) 431
BsaHI GRCGYC 1 cut(s) 647
BsaWI WCCGGW 1 cut(s) 673
Bsc4I CCNNNNNNNGG 3 cut(s) 96, 751, 752
Bse1I ACTGG 1 cut(s) 667
Bse8I GATNNNNATC 1 cut(s) 431
BseAI TCCGGA 1 cut(s) 673
BseBI CCWGG 2 cut(s) 172, 267
BseCI ATCGAT 2 cut(s) 73, 233
BseGI GGATG 3 cut(s) 286, 357, 594
BseJI GATNNNNATC 1 cut(s) 431
BseLI CCNNNNNNNGG 3 cut(s) 96, 751, 752
BseNI ACTGG 1 cut(s) 667
BseXI GCAGC 7 cut(s) 34, 40, 94, 98, 116, 152, 185
BseYI CCCAGC 2 cut(s) 37, 179
Bsh1236I CGCG 3 cut(s) 58, 116, 167
BshFI GGCC 2 cut(s) 170, 265
BshNI GGYRCC 1 cut(s) 646
BshVI ATCGAT 2 cut(s) 73, 233
BsiHKAI GWGCWC 1 cut(s) 477
BsiHKCI CYCGRG 1 cut(s) 17
BsiSI CCGG 5 cut(s) 53, 90, 440, 629, 674
BslFI GGGAC 1 cut(s) 27
BslI CCNNNNNNNGG 3 cut(s) 96, 751, 752
BsmAI GTCTC 1 cut(s) 321
BsmFI GGGAC 1 cut(s) 27
BsnI GGCC 2 cut(s) 170, 265
BsoBI CYCGRG 1 cut(s) 17
Bsp1286I GDGCHC 1 cut(s) 477
Bsp13I TCCGGA 1 cut(s) 673
Bsp143I GATC 5 cut(s) 70, 74, 183, 382, 631
BspACI CCGC 7 cut(s) 58, 116, 167, 500, 650, 746, 815
BspANI GGCC 2 cut(s) 170, 265
BspDI ATCGAT 2 cut(s) 73, 233
BspEI TCCGGA 1 cut(s) 673
BspFNI CGCG 3 cut(s) 58, 116, 167
BspHI TCATGA 1 cut(s) 387
BspLI GGNNCC 2 cut(s) 444, 648
BspMAI CTGCAG 2 cut(s) 112, 142
BspMI ACCTGC 1 cut(s) 335
BspPI GGATC 2 cut(s) 191, 639
BspT107I GGYRCC 1 cut(s) 646
BsrI ACTGG 1 cut(s) 667
BssMI GATC 5 cut(s) 70, 74, 183, 382, 631
BssNI GRCGYC 1 cut(s) 647
Bst2UI CCWGG 2 cut(s) 172, 267
Bst4CI ACNGT 1 cut(s) 256
BstACI GRCGYC 1 cut(s) 647
BstDEI CTNAG 1 cut(s) 597
BstF5I GGATG 3 cut(s) 286, 357, 594
BstFNI CGCG 3 cut(s) 58, 116, 167
BstH2I RGCGCY 3 cut(s) 97, 199, 650
BstHHI GCGC 5 cut(s) 58, 96, 167, 198, 649
BstKTI GATC 5 cut(s) 73, 77, 186, 385, 634
BstMAI GTCTC 1 cut(s) 321
BstMBI GATC 5 cut(s) 70, 74, 183, 382, 631
BstMWI GCNNNNNNNGC 7 cut(s) 34, 53, 113, 149, 176, 481, 625
BstNI CCWGG 2 cut(s) 172, 267
BstSCI CCNGG 3 cut(s) 89, 170, 265
BstSFI CTRYAG 3 cut(s) 108, 138, 160
BstUI CGCG 3 cut(s) 58, 116, 167
BstV1I GCAGC 7 cut(s) 34, 40, 94, 98, 116, 152, 185
BstV2I GAAGAC 2 cut(s) 140, 599
BstX2I RGATCY 2 cut(s) 382, 631
BstYI RGATCY 2 cut(s) 382, 631
Bsu15I ATCGAT 2 cut(s) 73, 233
BsuRI GGCC 2 cut(s) 170, 265
BsuTUI ATCGAT 2 cut(s) 73, 233
BtsCI GGATG 3 cut(s) 286, 357, 594
BtsI GCAGTG 1 cut(s) 150
BtsIMutI CAGTG 1 cut(s) 150
BveI ACCTGC 1 cut(s) 335
CaiI CAGNNNCTG 1 cut(s) 37
CciI TCATGA 1 cut(s) 387
CfoI GCGC 5 cut(s) 58, 96, 167, 198, 649
ClaI ATCGAT 2 cut(s) 73, 233
CseI GACGC 1 cut(s) 122
Csp6I GTAC 3 cut(s) 63, 348, 774
CviAII CATG 2 cut(s) 388, 436
CviQI GTAC 3 cut(s) 63, 348, 774
DdeI CTNAG 1 cut(s) 597
DinI GGCGCC 1 cut(s) 648
DpnI GATC 5 cut(s) 72, 76, 185, 384, 633
DpnII GATC 5 cut(s) 70, 74, 183, 382, 631
EciI GGCGGA 1 cut(s) 515
Eco32I GATATC 1 cut(s) 433
Eco57I CTGAAG 2 cut(s) 152, 644
Eco88I CYCGRG 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 290
EcoRII CCWGG 2 cut(s) 170, 265
EcoRV GATATC 1 cut(s) 433
EcoT22I ATGCAT 1 cut(s) 496
EgeI GGCGCC 1 cut(s) 648
EheI GGCGCC 1 cut(s) 648
FaeI CATG 2 cut(s) 391, 439
FaiI YATR 7 cut(s) 389, 419, 437, 448, 450, 561, 611
FaqI GGGAC 1 cut(s) 27
FatI CATG 2 cut(s) 387, 435
FauI CCCGC 3 cut(s) 109, 753, 808
FokI GGATG 3 cut(s) 293, 344, 601
FspBI CTAG 4 cut(s) 78, 320, 762, 768
GlaI GCGC 5 cut(s) 57, 95, 166, 197, 648
GsaI CCCAGC 2 cut(s) 41, 183
GsuI CTGGAG 3 cut(s) 145, 174, 193
HaeII RGCGCY 3 cut(s) 97, 199, 650
HaeIII GGCC 2 cut(s) 170, 265
HapII CCGG 5 cut(s) 53, 90, 440, 629, 674
HgaI GACGC 1 cut(s) 122
HhaI GCGC 5 cut(s) 58, 96, 167, 198, 649
Hin1I GRCGYC 1 cut(s) 647
Hin1II CATG 2 cut(s) 391, 439
Hin6I GCGC 5 cut(s) 56, 94, 165, 196, 647
HinP1I GCGC 5 cut(s) 56, 94, 165, 196, 647
HindIII AAGCTT 1 cut(s) 553
HinfI GANTC 5 cut(s) 15, 216, 235, 332, 371
HpaII CCGG 5 cut(s) 53, 90, 440, 629, 674
HphI GGTGA 1 cut(s) 613
Hpy166II GTNNAC 2 cut(s) 63, 516
Hpy188I TCNGA 3 cut(s) 337, 624, 636
Hpy188III TCNNGA 4 cut(s) 78, 310, 388, 674
Hpy8I GTNNAC 2 cut(s) 63, 516
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 2 cut(s) 579, 598
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4V TGCA 6 cut(s) 28, 110, 140, 260, 494, 528
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 53, 113, 149, 176, 481, 625
HpyF3I CTNAG 1 cut(s) 597
Hsp92I GRCGYC 1 cut(s) 647
Hsp92II CATG 2 cut(s) 391, 439
HspAI GCGC 5 cut(s) 56, 94, 165, 196, 647
KasI GGCGCC 1 cut(s) 646
Kpn2I TCCGGA 1 cut(s) 673
Kzo9I GATC 5 cut(s) 70, 74, 183, 382, 631
LmnI GCTCC 1 cut(s) 55
Lsp1109I GCAGC 7 cut(s) 34, 40, 94, 98, 116, 152, 185
LweI GCATC 1 cut(s) 481
MaeI CTAG 4 cut(s) 78, 320, 762, 768
MaeIII GTNAC 1 cut(s) 250
MalI GATC 5 cut(s) 72, 76, 185, 384, 633
MboI GATC 5 cut(s) 70, 74, 183, 382, 631
MboII GAAGA 7 cut(s) 145, 211, 358, 604, 668, 745, 855
MfeI CAATTG 1 cut(s) 789
MflI RGATCY 2 cut(s) 382, 631
MhlI GDGCHC 1 cut(s) 477
MluCI AATT 7 cut(s) 225, 290, 338, 570, 789, 804, 848
Mly113I GGCGCC 1 cut(s) 647
MlyI GAGTC 3 cut(s) 9, 341, 365
MmeI TCCRAC 2 cut(s) 258, 562
MnlI CCTC 4 cut(s) 120, 149, 168, 186
Mph1103I ATGCAT 1 cut(s) 496
MroI TCCGGA 1 cut(s) 673
MroXI GAANNNNTTC 2 cut(s) 305, 395
MseI TTAA 2 cut(s) 537, 551
MslI CAYNNNNRTG 1 cut(s) 523
MspA1I CMGCKG 2 cut(s) 107, 748
MspI CCGG 5 cut(s) 53, 90, 440, 629, 674
MspR9I CCNGG 3 cut(s) 91, 172, 267
MunI CAATTG 1 cut(s) 789
MvaI CCWGG 2 cut(s) 172, 267
MvnI CGCG 3 cut(s) 58, 116, 167
MwoI GCNNNNNNNGC 7 cut(s) 34, 53, 113, 149, 176, 481, 625
NarI GGCGCC 1 cut(s) 647
NciI CCSGG 1 cut(s) 91
NdeII GATC 5 cut(s) 70, 74, 183, 382, 631
NlaIII CATG 2 cut(s) 391, 439
NlaIV GGNNCC 2 cut(s) 444, 648
NmeAIII GCCGAG 1 cut(s) 533
NsiI ATGCAT 1 cut(s) 496
OliI CACNNNNGTG 1 cut(s) 523
PagI TCATGA 1 cut(s) 387
PdmI GAANNNNTTC 2 cut(s) 305, 395
PfeI GAWTC 2 cut(s) 216, 235
PleI GAGTC 3 cut(s) 9, 340, 365
PluTI GGCGCC 1 cut(s) 650
PpsI GAGTC 3 cut(s) 9, 340, 365
Psp6I CCWGG 2 cut(s) 170, 265
PspFI CCCAGC 2 cut(s) 37, 179
PspGI CCWGG 2 cut(s) 170, 265
PspN4I GGNNCC 2 cut(s) 444, 648
PstI CTGCAG 2 cut(s) 112, 142
PstNI CAGNNNCTG 1 cut(s) 37
PsuI RGATCY 2 cut(s) 382, 631
PvuII CAGCTG 1 cut(s) 107
RsaI GTAC 3 cut(s) 64, 349, 775
RsaNI GTAC 3 cut(s) 63, 348, 774
RseI CAYNNNNRTG 1 cut(s) 523
SaqAI TTAA 2 cut(s) 537, 551
Sau3AI GATC 5 cut(s) 70, 74, 183, 382, 631
SchI GAGTC 3 cut(s) 9, 341, 365
ScrFI CCNGG 3 cut(s) 91, 172, 267
SduI GDGCHC 1 cut(s) 477
SetI ASST 8 cut(s) 109, 349, 415, 455, 486, 557, 603, 691
SfaNI GCATC 1 cut(s) 481
SfcI CTRYAG 3 cut(s) 108, 138, 160
SfoI GGCGCC 1 cut(s) 648
SmiMI CAYNNNNRTG 1 cut(s) 523
SmlI CTYRAG 1 cut(s) 521
SmoI CTYRAG 1 cut(s) 521
Sse9I AATT 7 cut(s) 225, 290, 338, 570, 789, 804, 848
SsiI CCGC 7 cut(s) 58, 116, 167, 500, 650, 746, 815
SspDI GGCGCC 1 cut(s) 646
SspMI CTAG 4 cut(s) 78, 320, 762, 768
StyD4I CCNGG 3 cut(s) 89, 170, 265
TaaI ACNGT 1 cut(s) 256
TaqI TCGA 6 cut(s) 73, 186, 233, 369, 374, 684
TasI AATT 7 cut(s) 225, 290, 338, 570, 789, 804, 848
TatI WGTACW 1 cut(s) 773
TauI GCSGC 2 cut(s) 170, 652
TfiI GAWTC 2 cut(s) 216, 235
Tru1I TTAA 2 cut(s) 537, 551
Tru9I TTAA 2 cut(s) 537, 551
TscAI CASTG 1 cut(s) 150
TseI GCWGC 8 cut(s) 4, 28, 47, 86, 104, 107, 140, 198
TspDTI ATGAA 4 cut(s) 219, 404, 434, 605
TspRI CASTG 1 cut(s) 150
XapI RAATTY 2 cut(s) 290, 848
XbaI TCTAGA 1 cut(s) 77
XmnI GAANNNNTTC 2 cut(s) 305, 395
XspI CTAG 4 cut(s) 78, 320, 762, 768
Zsp2I ATGCAT 1 cut(s) 496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.