Rmu_sc0005791.1_g000002

ADP binding

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005791.1
Physical Location & Seq
Reverse (-)
4988 .. 6199
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005791.1_g000002.1.cds

Sequence Viewer

Length: 1212 bp
atggcattggatgttgctgaattcctgtggaacaagttcttgatgtctctagcagagctagagtctgaatctaattcaggttctattaccatctctgtcttcaaatcatctataaaagatctcgcgtctgaattcaaagcaatcaaagatgttgtgaatgagagagatataatgccgaaaccttataccggctcagaaattattgatgtgctctacaatctcaacgatgcattggctgagtgccgagtcttcgcacatgagtgcatagaaataactgatatgtactcacgcttcaactttcgaagatttactttcatctcaaagataaagggtcggctggccaaaataaaacaggagcttgaggacttgccgcaacaacaaaatggcaatcctcgggaaaagaccgaattcactggatccggacctaaactttcagccaaagttttcggatttgacgagcaattaaaggagattaatgaaaagttgctacaagcaggggtttccagttctagcagtgctggtaaattgacggcaattggggtagttggcattgctggagtgggtaagaccaccctggttcagaaggttttggagagcgaggaagtgatgaagaagtttaatcatatactgtggctgcccttttcgggtatgagtgaaggagaacaacaatatagtaggtttagctttgaaacacgtatcttcgatggtaatggccgtaccatagaggagagggttgttggccttgataagctcctggaaaggctaagccgcctgctgttatcaggtaaatgctatttgattgtgttggatgatgtgtgtcatcggcacattaacattatggaacgcttatgcagcggactgcccaagcataatggtagtgctataattgtcactactagattgaaggaagtagctctaaagctggggaaacaacatgagttgacaatggttcatgttaagcctctggacggaaagatttgtgggagtatatttctggagcacctcttatcacgtgacgaagttaagacaacgattagggaaaacgtatcaggagaagagattgaggagcacttgttatcaaagatggaggaaatagtatcaagaggaaagtttgaggaaatcaagaatccgtgccacggtctaccgttggtagcgaagacaatcgcaaacacaattcctgtggagggagtcttgacttatttcttgtcttga

Protein Analysis

403

Amino Acids

45.23

Weight (kDa)

6.26

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1141
AccII CGCG 1 cut(s) 125
AccIII TCCGGA 1 cut(s) 419
AciI CCGC 3 cut(s) 371, 769, 855
AclWI GGATC 2 cut(s) 411, 424
AcoI YGGCCR 2 cut(s) 339, 712
AcsI RAATTY 3 cut(s) 20, 131, 407
AcvI CACGTG 1 cut(s) 1013
AfaI GTAC 2 cut(s) 284, 718
AfiI CCNNNNNNNGG 5 cut(s) 188, 644, 968, 1136, 1184
AflIII ACRYGT 1 cut(s) 692
AgsI TTSAA 5 cut(s) 103, 136, 295, 689, 904
AjnI CCWGG 2 cut(s) 573, 753
AleI CACNNNNGTG 1 cut(s) 259
AluBI AGCT 6 cut(s) 58, 358, 684, 751, 914, 922
AluI AGCT 6 cut(s) 58, 358, 684, 751, 914, 922
Alw21I GWGCWC 3 cut(s) 213, 1002, 1071
Alw26I GTCTC 1 cut(s) 51
AlwI GGATC 2 cut(s) 411, 424
Ama87I CYCGRG 1 cut(s) 393
Aor13HI TCCGGA 1 cut(s) 419
AoxI GGCC 3 cut(s) 339, 712, 739
ApeKI GCWGC 2 cut(s) 634, 852
ApoI RAATTY 3 cut(s) 20, 131, 407
AseI ATTAAT 1 cut(s) 474
Asp700I GAANNNNTTC 1 cut(s) 35
AspS9I GGNCC 1 cut(s) 422
AsuII TTCGAA 1 cut(s) 301
AvaI CYCGRG 1 cut(s) 393
AvaII GGWCC 1 cut(s) 422
BalI TGGCCA 1 cut(s) 341
BamHI GGATCC 1 cut(s) 416
BarI GAAGNNNNNNTAC 2 cut(s) 275, 307
BbrPI CACGTG 1 cut(s) 1013
BbsI GAAGAC 3 cut(s) 91, 241, 1163
Bbv12I GWGCWC 3 cut(s) 213, 1002, 1071
BbvI GCAGC 2 cut(s) 621, 864
BccI CCATC 3 cut(s) 98, 698, 1078
BceAI ACGGC 2 cut(s) 546, 699
BciT130I CCWGG 2 cut(s) 575, 755
BcoDI GTCTC 1 cut(s) 51
BfaI CTAG 4 cut(s) 50, 59, 510, 897
BglII AGATCT 1 cut(s) 118
BisI GCNGC 4 cut(s) 371, 635, 769, 853
BlpI GCTNAGC 1 cut(s) 764
BlsI GCNGC 4 cut(s) 372, 636, 770, 854
Bme1390I CCNGG 2 cut(s) 575, 755
Bme18I GGWCC 1 cut(s) 422
BmeT110I CYCGRG 1 cut(s) 393
BmgT120I GGNCC 1 cut(s) 422
BmiI GGNNCC 1 cut(s) 418
BmrFI CCNGG 2 cut(s) 575, 755
BmsI GCATC 1 cut(s) 217
BpiI GAAGAC 3 cut(s) 91, 241, 1163
BpmI CTGGAG 2 cut(s) 576, 1016
Bpu1102I GCTNAGC 1 cut(s) 764
Bpu14I TTCGAA 1 cut(s) 301
BpuEI CTTGAG 1 cut(s) 380
BsaAI YACGTR 2 cut(s) 695, 1013
BsaJI CCNNGG 3 cut(s) 392, 573, 1135
BsaWI WCCGGW 1 cut(s) 419
BsaXI ACNNNNNCTCC 2 cut(s) 1058, 1088
Bsc4I CCNNNNNNNGG 5 cut(s) 188, 644, 968, 1136, 1184
Bse118I RCCGGY 1 cut(s) 188
Bse1I ACTGG 2 cut(s) 418, 504
Bse3DI GCAATG 1 cut(s) 549
BseAI TCCGGA 1 cut(s) 419
BseBI CCWGG 2 cut(s) 575, 755
BseDI CCNNGG 3 cut(s) 392, 573, 1135
BseGI GGATG 2 cut(s) 16, 814
BseLI CCNNNNNNNGG 5 cut(s) 188, 644, 968, 1136, 1184
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 2 cut(s) 207, 228
BseNI ACTGG 2 cut(s) 418, 504
BseRI GAGGAG 2 cut(s) 740, 1079
BseXI GCAGC 2 cut(s) 621, 864
BseYI CCCAGC 1 cut(s) 922
Bsh1236I CGCG 1 cut(s) 125
BshFI GGCC 3 cut(s) 341, 714, 741
BsiHKAI GWGCWC 3 cut(s) 213, 1002, 1071
BsiHKCI CYCGRG 1 cut(s) 393
BsiSI CCGG 2 cut(s) 189, 420
BslI CCNNNNNNNGG 5 cut(s) 188, 644, 968, 1136, 1184
BsmAI GTCTC 1 cut(s) 51
BsnI GGCC 3 cut(s) 341, 714, 741
BsoBI CYCGRG 1 cut(s) 393
Bsp119I TTCGAA 1 cut(s) 301
Bsp1286I GDGCHC 3 cut(s) 213, 1002, 1071
Bsp13I TCCGGA 1 cut(s) 419
Bsp143I GATC 2 cut(s) 118, 416
Bsp1720I GCTNAGC 1 cut(s) 764
BspACI CCGC 3 cut(s) 371, 769, 855
BspANI GGCC 3 cut(s) 341, 714, 741
BspCNI CTCAG 2 cut(s) 206, 229
BspEI TCCGGA 1 cut(s) 419
BspFNI CGCG 1 cut(s) 125
BspLI GGNNCC 1 cut(s) 418
BspPI GGATC 2 cut(s) 411, 424
BspT104I TTCGAA 1 cut(s) 301
BsrDI GCAATG 1 cut(s) 549
BsrFI RCCGGY 1 cut(s) 188
BsrI ACTGG 2 cut(s) 418, 504
BssAI RCCGGY 1 cut(s) 188
BssECI CCNNGG 3 cut(s) 392, 573, 1135
BssMI GATC 2 cut(s) 118, 416
Bst2UI CCWGG 2 cut(s) 575, 755
Bst4CI ACNGT 3 cut(s) 630, 1139, 1146
Bst6I CTCTTC 1 cut(s) 1050
BstBAI YACGTR 2 cut(s) 695, 1013
BstBI TTCGAA 1 cut(s) 301
BstC8I GCNNGC 2 cut(s) 339, 773
BstDEI CTNAG 3 cut(s) 193, 237, 764
BstDSI CCRYGG 1 cut(s) 1135
BstF5I GGATG 2 cut(s) 16, 814
BstFNI CGCG 1 cut(s) 125
BstKTI GATC 2 cut(s) 121, 419
BstMAI GTCTC 1 cut(s) 51
BstMBI GATC 2 cut(s) 118, 416
BstMWI GCNNNNNNNGC 1 cut(s) 852
BstNI CCWGG 2 cut(s) 575, 755
BstSCI CCNGG 2 cut(s) 573, 753
BstUI CGCG 1 cut(s) 125
BstV1I GCAGC 2 cut(s) 621, 864
BstV2I GAAGAC 3 cut(s) 91, 241, 1163
BstX2I RGATCY 2 cut(s) 118, 416
BstYI RGATCY 2 cut(s) 118, 416
BsuRI GGCC 3 cut(s) 341, 714, 741
BtgI CCRYGG 1 cut(s) 1135
BtsCI GGATG 2 cut(s) 16, 814
BtsI GCAGTG 1 cut(s) 520
BtsIMutI CAGTG 2 cut(s) 411, 520
Cac8I GCNNGC 2 cut(s) 339, 773
Cfr10I RCCGGY 1 cut(s) 188
Cfr13I GGNCC 1 cut(s) 422
CseI GACGC 1 cut(s) 114
Csp6I GTAC 2 cut(s) 283, 717
CspCI CAANNNNNGTGG 2 cut(s) 1161, 1196
CviAII CATG 3 cut(s) 257, 935, 953
CviQI GTAC 2 cut(s) 283, 717
DdeI CTNAG 3 cut(s) 193, 237, 764
DpnI GATC 2 cut(s) 120, 418
DpnII GATC 2 cut(s) 118, 416
EaeI YGGCCR 2 cut(s) 339, 712
Eam1104I CTCTTC 1 cut(s) 1050
EarI CTCTTC 1 cut(s) 1050
Eco47I GGWCC 1 cut(s) 422
Eco72I CACGTG 1 cut(s) 1013
Eco88I CYCGRG 1 cut(s) 393
EcoRI GAATTC 3 cut(s) 20, 131, 407
EcoRII CCWGG 2 cut(s) 573, 753
EcoT22I ATGCAT 1 cut(s) 232
FaeI CATG 3 cut(s) 260, 938, 956
FalI AAGNNNNNCTT 2 cut(s) 295, 327
FatI CATG 3 cut(s) 256, 934, 952
FblI GTMKAC 1 cut(s) 1141
Fnu4HI GCNGC 4 cut(s) 371, 635, 769, 853
FokI GGATG 2 cut(s) 23, 821
Fsp4HI GCNGC 4 cut(s) 371, 635, 769, 853
FspBI CTAG 4 cut(s) 50, 59, 510, 897
GluI GCNGC 4 cut(s) 371, 635, 769, 853
GsaI CCCAGC 1 cut(s) 926
GsuI CTGGAG 2 cut(s) 576, 1016
HaeIII GGCC 3 cut(s) 341, 714, 741
HapII CCGG 2 cut(s) 189, 420
HgaI GACGC 1 cut(s) 114
Hin1II CATG 3 cut(s) 260, 938, 956
HincII GTYRAC 1 cut(s) 942
HindII GTYRAC 1 cut(s) 942
HinfI GANTC 5 cut(s) 62, 68, 246, 1126, 1188
HpaII CCGG 2 cut(s) 189, 420
Hpy166II GTNNAC 2 cut(s) 942, 1142
Hpy188I TCNGA 5 cut(s) 67, 130, 196, 449, 582
Hpy8I GTNNAC 2 cut(s) 942, 1142
HpyAV CCTTC 3 cut(s) 577, 650, 898
HpyCH4III ACNGT 3 cut(s) 630, 1139, 1146
HpyCH4IV ACGT 3 cut(s) 694, 1012, 1044
HpyCH4V TGCA 3 cut(s) 230, 264, 852
HpyF10VI GCNNNNNNNGC 1 cut(s) 852
HpyF3I CTNAG 3 cut(s) 193, 237, 764
HpySE526I ACGT 3 cut(s) 694, 1012, 1044
Hsp92II CATG 3 cut(s) 260, 938, 956
Kpn2I TCCGGA 1 cut(s) 419
Kzo9I GATC 2 cut(s) 118, 416
LmnI GCTCC 4 cut(s) 355, 756, 997, 1066
Lsp1109I GCAGC 2 cut(s) 621, 864
LweI GCATC 1 cut(s) 217
MaeI CTAG 4 cut(s) 50, 59, 510, 897
MaeII ACGT 3 cut(s) 694, 1012, 1044
MaeIII GTNAC 2 cut(s) 889, 1013
MalI GATC 2 cut(s) 120, 418
MboI GATC 2 cut(s) 118, 416
MboII GAAGA 7 cut(s) 91, 241, 315, 622, 691, 1067, 1168
MfeI CAATTG 1 cut(s) 534
MflI RGATCY 2 cut(s) 118, 416
MhlI GDGCHC 3 cut(s) 213, 1002, 1071
MlsI TGGCCA 1 cut(s) 341
MluNI TGGCCA 1 cut(s) 341
MlyI GAGTC 3 cut(s) 71, 255, 1197
MmeI TCCRAC 1 cut(s) 786
Mox20I TGGCCA 1 cut(s) 341
Mph1103I ATGCAT 1 cut(s) 232
MroI TCCGGA 1 cut(s) 419
MroXI GAANNNNTTC 1 cut(s) 35
MscI TGGCCA 1 cut(s) 341
MseI TTAA 6 cut(s) 464, 474, 618, 831, 957, 1023
MslI CAYNNNNRTG 1 cut(s) 259
Msp20I TGGCCA 1 cut(s) 341
MspA1I CMGCKG 1 cut(s) 855
MspI CCGG 2 cut(s) 189, 420
MspR9I CCNGG 2 cut(s) 575, 755
MunI CAATTG 1 cut(s) 534
MvaI CCWGG 2 cut(s) 575, 755
MvnI CGCG 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 852
NdeII GATC 2 cut(s) 118, 416
NlaIII CATG 3 cut(s) 260, 938, 956
NlaIV GGNNCC 1 cut(s) 418
NmeAIII GCCGAG 1 cut(s) 269
NmuCI GTSAC 2 cut(s) 889, 1013
NsiI ATGCAT 1 cut(s) 232
NspV TTCGAA 1 cut(s) 301
OliI CACNNNNGTG 1 cut(s) 259
PcsI WCGNNNNNNNCGW 1 cut(s) 453
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 2 cut(s) 68, 1126
PfoI TCCNGGA 1 cut(s) 753
PkrI GCNGC 4 cut(s) 372, 636, 770, 854
PleI GAGTC 3 cut(s) 70, 254, 1196
PmaCI CACGTG 1 cut(s) 1013
PmlI CACGTG 1 cut(s) 1013
PpsI GAGTC 3 cut(s) 70, 254, 1196
Ppu21I YACGTR 2 cut(s) 695, 1013
PshBI ATTAAT 1 cut(s) 474
Psp6I CCWGG 2 cut(s) 573, 753
PspCI CACGTG 1 cut(s) 1013
PspFI CCCAGC 1 cut(s) 922
PspGI CCWGG 2 cut(s) 573, 753
PspN4I GGNNCC 1 cut(s) 418
PspPI GGNCC 1 cut(s) 422
PsuI RGATCY 2 cut(s) 118, 416
RsaI GTAC 2 cut(s) 284, 718
RsaNI GTAC 2 cut(s) 283, 717
RseI CAYNNNNRTG 1 cut(s) 259
SaqAI TTAA 6 cut(s) 464, 474, 618, 831, 957, 1023
SatI GCNGC 4 cut(s) 371, 635, 769, 853
Sau3AI GATC 2 cut(s) 118, 416
Sau96I GGNCC 1 cut(s) 422
SchI GAGTC 3 cut(s) 71, 255, 1197
ScrFI CCNGG 2 cut(s) 575, 755
SduI GDGCHC 3 cut(s) 213, 1002, 1071
SfaNI GCATC 1 cut(s) 217
SfuI TTCGAA 1 cut(s) 301
SinI GGWCC 1 cut(s) 422
SmiMI CAYNNNNRTG 1 cut(s) 259
SmlI CTYRAG 1 cut(s) 359
SmoI CTYRAG 1 cut(s) 359
SsiI CCGC 3 cut(s) 371, 769, 855
SspMI CTAG 4 cut(s) 50, 59, 510, 897
StyD4I CCNGG 2 cut(s) 573, 753
TaaI ACNGT 3 cut(s) 630, 1139, 1146
TaiI ACGT 3 cut(s) 697, 1015, 1047
TaqI TCGA 2 cut(s) 301, 702
TaqII GACCGA 1 cut(s) 419
TatI WGTACW 1 cut(s) 282
TauI GCSGC 2 cut(s) 373, 771
TfiI GAWTC 2 cut(s) 68, 1126
Tru1I TTAA 6 cut(s) 464, 474, 618, 831, 957, 1023
Tru9I TTAA 6 cut(s) 464, 474, 618, 831, 957, 1023
TscAI CASTG 2 cut(s) 418, 520
TseFI GTSAC 2 cut(s) 889, 1013
TseI GCWGC 2 cut(s) 634, 852
Tsp45I GTSAC 2 cut(s) 889, 1013
TspDTI ATGAA 4 cut(s) 304, 492, 623, 941
TspGWI ACGGA 2 cut(s) 984, 1119
TspRI CASTG 2 cut(s) 418, 520
VpaK11BI GGWCC 1 cut(s) 422
VspI ATTAAT 1 cut(s) 474
XapI RAATTY 3 cut(s) 20, 131, 407
XmiI GTMKAC 1 cut(s) 1141
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 4 cut(s) 50, 59, 510, 897
Zsp2I ATGCAT 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.