Rh2CG476600

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
64186245 .. 64220236
33992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG476600.1

Sequence Viewer

Length: 1188 bp
ATGCACTTCAGGTCCTTTGTCACAACGAAAGCAGAAGGTTTCGGTGAAGAAAAACGTTTTAGCATGTCAAATTGGGAAATAGTGCAGAAGATTGAGAATGAAATTCTGGATCAAATAGGTGGTCTACCATCAATTGCTAAGGCACTCGCAGAACTAATAGTTGAAAAACGGATTATTGAGACTGATGATAAGGGGTCTGCCCTGAAGGAGATGTTGATACCTCATGAATTTCTTATTCATCGTTCATACATATTTGTTCCAGTCAATGAAAGGAACATAAAATGGATTGCTGATAAAACTGACATACCAAAATGCCCAGTCTTCGTGTTTGTTGATTTAAAAATGGAATTCTTTGCAGTAAGACTTCTCGAAGAATTTCGCTATCAGCTTAATCAAGATCAGGTTGTTGCTGTTCTAGACCAGAGTTTCATTAATAGGCAAAAGATAAAGACAGAGGAACCAGAAAAGGCGCTAAAAGAGTTTTATGGTATTCTCGAAAATCTTAAGTGCAAAGGACATAAATTTGCTGTTGAAATTCAAAAGAAGATGACAATTATGAATAGCATGCCCTGTTTAAATGCTGAATATTGTGTCGCTTATGTTGTATTAAGTTTAAACTGGACCTTAAGCATCGCACTTGCAAAAGTAGAGGTTTTGAAACATCATGGTGATCAGTGGGAGGTGCTTAGCATTCCTAGTAGCGTCAGATCAATTGTTTGTCTTAACTTGCCTAGTTTTCTTGGTGGGCTAACTCCTTGGACAACAGCAGATATAAAGAAAGATCAAACAAGAGGCCTGTCCTCATCTTTCATAGATGATGGATATCTTGAAATTATTGGTTCAAAAGATGATTTACTTTCCCAGAAGAAAAGGTGGATTCGCCTTGATCAGGTACAAGAAATGCGCTTCAAGTTTATTGAGGATTCAGATGCGGTTGTAAACATGACAATCGATGGGGTACAGTTGAAAAGAACTTCACTTGATGGTTTACTCGAGATTGAAATCTCTTACCAGTGTCAAGTTAATGTTCTTGTTAAACAAGACTACTCAGCCAAAAATACCCATGCCTCATCGCAGCCCTGTGGTTCAGAAACTGATGATGATAATGATAGAGAGTATTCTCAAAGCTATAAGAAATTTGGGGCAGCAAGCAGCTTTAAAATGCCGGAGGATGACATTAGTTGCTGA

Protein Analysis

395

Amino Acids

45.22

Weight (kDa)

5.39

Isoelectric Point (pI)

47.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAGK_acc PF00609 200 - 319 2.5e-09 Diacylglycerol kinase accessory domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 124
AciI CCGC 1 cut(s) 932
AclI AACGTT 1 cut(s) 55
AclWI GGATC 1 cut(s) 117
AcsI RAATTY 7 cut(s) 102, 227, 347, 374, 521, 534, 1136
AcuI CTGAAG 1 cut(s) 224
AfaI GTAC 2 cut(s) 894, 960
AfiI CCNNNNNNNGG 1 cut(s) 889
AflII CTTAAG 2 cut(s) 503, 625
AgsI TTSAA 9 cut(s) 164, 533, 539, 658, 830, 843, 910, 967, 1001
AluBI AGCT 3 cut(s) 388, 1128, 1155
AluI AGCT 3 cut(s) 388, 1128, 1155
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 1 cut(s) 117
AlwNI CAGNNNCTG 1 cut(s) 1094
Ama87I CYCGRG 1 cut(s) 992
AoxI GGCC 1 cut(s) 793
ApeKI GCWGC 3 cut(s) 1075, 1145, 1152
ApoI RAATTY 7 cut(s) 102, 227, 347, 374, 521, 534, 1136
ArsI GACNNNNNNTTYG 2 cut(s) 106, 138
AseI ATTAAT 1 cut(s) 432
Asp700I GAANNNNTTC 1 cut(s) 375
AspLEI GCGC 2 cut(s) 472, 906
AspS9I GGNCC 2 cut(s) 12, 621
AsuHPI GGTGA 2 cut(s) 56, 680
AvaI CYCGRG 1 cut(s) 992
AvaII GGWCC 2 cut(s) 12, 621
BbsI GAAGAC 1 cut(s) 313
BbvI GCAGC 3 cut(s) 1087, 1157, 1164
BccI CCATC 4 cut(s) 136, 812, 947, 977
BclI TGATCA 2 cut(s) 670, 886
BcoDI GTCTC 1 cut(s) 173
BfaI CTAG 3 cut(s) 416, 696, 732
BfoI RGCGCY 1 cut(s) 473
BfrI CTTAAG 2 cut(s) 503, 625
BisI GCNGC 3 cut(s) 1076, 1146, 1153
BlpI GCTNAGC 1 cut(s) 686
BlsI GCNGC 3 cut(s) 1077, 1147, 1154
Bme18I GGWCC 2 cut(s) 12, 621
BmeT110I CYCGRG 1 cut(s) 992
BmgT120I GGNCC 2 cut(s) 12, 621
BmiI GGNNCC 1 cut(s) 459
BmrI ACTGGG 1 cut(s) 311
BmsI GCATC 2 cut(s) 639, 919
BmuI ACTGGG 1 cut(s) 311
BpiI GAAGAC 1 cut(s) 313
Bpu10I CCTNAGC 1 cut(s) 138
Bpu1102I GCTNAGC 1 cut(s) 686
Bsa29I ATCGAT 1 cut(s) 951
BsaBI GATNNNNATC 2 cut(s) 822, 1001
BsaJI CCNNGG 1 cut(s) 755
Bsc4I CCNNNNNNNGG 1 cut(s) 889
Bse1I ACTGG 4 cut(s) 260, 317, 623, 1012
Bse8I GATNNNNATC 2 cut(s) 822, 1001
BseCI ATCGAT 1 cut(s) 951
BseDI CCNNGG 1 cut(s) 755
BseGI GGATG 1 cut(s) 1177
BseJI GATNNNNATC 2 cut(s) 822, 1001
BseLI CCNNNNNNNGG 1 cut(s) 889
BseMII CTCAG 1 cut(s) 1062
BseNI ACTGG 4 cut(s) 260, 317, 623, 1012
BseXI GCAGC 3 cut(s) 1087, 1157, 1164
BsgI GTGCAG 1 cut(s) 104
BshFI GGCC 1 cut(s) 795
BshVI ATCGAT 1 cut(s) 951
BsiHKCI CYCGRG 1 cut(s) 992
BsiSI CCGG 1 cut(s) 1166
BslI CCNNNNNNNGG 1 cut(s) 889
BsmAI GTCTC 1 cut(s) 173
BsmI GAATGC 1 cut(s) 690
BsnI GGCC 1 cut(s) 795
BsoBI CYCGRG 1 cut(s) 992
Bsp143I GATC 6 cut(s) 109, 397, 670, 707, 781, 886
Bsp1720I GCTNAGC 1 cut(s) 686
BspACI CCGC 1 cut(s) 932
BspANI GGCC 1 cut(s) 795
BspCNI CTCAG 1 cut(s) 1061
BspDI ATCGAT 1 cut(s) 951
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 1 cut(s) 459
BspPI GGATC 1 cut(s) 117
BspTI CTTAAG 2 cut(s) 503, 625
BsrI ACTGG 4 cut(s) 260, 317, 623, 1012
BssECI CCNNGG 1 cut(s) 755
BssMI GATC 6 cut(s) 109, 397, 670, 707, 781, 886
BssT1I CCWWGG 1 cut(s) 755
Bst4CI ACNGT 1 cut(s) 963
BstAFI CTTAAG 2 cut(s) 503, 625
BstC8I GCNNGC 2 cut(s) 566, 1150
BstDEI CTNAG 3 cut(s) 138, 686, 1048
BstENI CCTNNNNNAGG 1 cut(s) 887
BstF5I GGATG 1 cut(s) 1177
BstH2I RGCGCY 1 cut(s) 473
BstHHI GCGC 2 cut(s) 472, 906
BstKTI GATC 6 cut(s) 112, 400, 673, 710, 784, 889
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 6 cut(s) 109, 397, 670, 707, 781, 886
BstNSI RCATGY 2 cut(s) 67, 568
BstV1I GCAGC 3 cut(s) 1087, 1157, 1164
BstV2I GAAGAC 1 cut(s) 313
Bsu15I ATCGAT 1 cut(s) 951
BsuRI GGCC 1 cut(s) 795
BsuTUI ATCGAT 1 cut(s) 951
BtgZI GCGATG 2 cut(s) 616, 1056
BtsCI GGATG 1 cut(s) 1177
BtsIMutI CAGTG 2 cut(s) 680, 1019
Cac8I GCNNGC 2 cut(s) 566, 1150
CaiI CAGNNNCTG 1 cut(s) 1094
CciI TCATGA 1 cut(s) 223
CfoI GCGC 2 cut(s) 472, 906
Cfr13I GGNCC 2 cut(s) 12, 621
ClaI ATCGAT 1 cut(s) 951
CseI GACGC 1 cut(s) 691
Csp6I GTAC 2 cut(s) 893, 959
CviAII CATG 6 cut(s) 64, 224, 565, 665, 943, 1064
CviJI RGCY 7 cut(s) 388, 748, 795, 1052, 1078, 1128, 1155
CviKI_1 RGCY 7 cut(s) 388, 748, 795, 1052, 1078, 1128, 1155
CviQI GTAC 2 cut(s) 893, 959
DdeI CTNAG 3 cut(s) 138, 686, 1048
DpnI GATC 6 cut(s) 111, 399, 672, 709, 783, 888
DpnII GATC 6 cut(s) 109, 397, 670, 707, 781, 886
DraI TTTAAA 4 cut(s) 339, 576, 615, 1159
Eco130I CCWWGG 1 cut(s) 755
Eco147I AGGCCT 1 cut(s) 795
Eco32I GATATC 1 cut(s) 824
Eco47I GGWCC 2 cut(s) 12, 621
Eco57I CTGAAG 1 cut(s) 224
Eco88I CYCGRG 1 cut(s) 992
EcoNI CCTNNNNNAGG 1 cut(s) 887
EcoO109I RGGNCCY 1 cut(s) 12
EcoRI GAATTC 1 cut(s) 347
EcoRV GATATC 1 cut(s) 824
EcoT14I CCWWGG 1 cut(s) 755
ErhI CCWWGG 1 cut(s) 755
FaeI CATG 6 cut(s) 67, 227, 568, 668, 946, 1067
FatI CATG 6 cut(s) 63, 223, 564, 664, 942, 1063
FbaI TGATCA 2 cut(s) 670, 886
FblI GTMKAC 1 cut(s) 124
Fnu4HI GCNGC 3 cut(s) 1076, 1146, 1153
FokI GGATG 1 cut(s) 1184
Fsp4HI GCNGC 3 cut(s) 1076, 1146, 1153
FspBI CTAG 3 cut(s) 416, 696, 732
GlaI GCGC 2 cut(s) 471, 905
GluI GCNGC 3 cut(s) 1076, 1146, 1153
HaeII RGCGCY 1 cut(s) 473
HaeIII GGCC 1 cut(s) 795
HapII CCGG 1 cut(s) 1166
HgaI GACGC 1 cut(s) 691
HhaI GCGC 2 cut(s) 472, 906
Hin1II CATG 6 cut(s) 67, 227, 568, 668, 946, 1067
Hin6I GCGC 2 cut(s) 470, 904
HinP1I GCGC 2 cut(s) 470, 904
HinfI GANTC 2 cut(s) 877, 923
HpaII CCGG 1 cut(s) 1166
HphI GGTGA 2 cut(s) 56, 680
Hpy166II GTNNAC 3 cut(s) 125, 940, 989
Hpy188I TCNGA 3 cut(s) 707, 928, 1090
Hpy188III TCNNGA 8 cut(s) 107, 224, 368, 395, 416, 494, 827, 994
Hpy8I GTNNAC 3 cut(s) 125, 940, 989
HpyAV CCTTC 2 cut(s) 29, 199
HpyCH4III ACNGT 1 cut(s) 963
HpyCH4IV ACGT 1 cut(s) 55
HpyCH4V TGCA 5 cut(s) 4, 85, 356, 510, 641
HpyF3I CTNAG 3 cut(s) 138, 686, 1048
HpySE526I ACGT 1 cut(s) 55
Hsp92II CATG 6 cut(s) 67, 227, 568, 668, 946, 1067
HspAI GCGC 2 cut(s) 470, 904
Ksp22I TGATCA 2 cut(s) 670, 886
Kzo9I GATC 6 cut(s) 109, 397, 670, 707, 781, 886
Lsp1109I GCAGC 3 cut(s) 1087, 1157, 1164
LweI GCATC 2 cut(s) 639, 919
MaeI CTAG 3 cut(s) 416, 696, 732
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 1 cut(s) 19
MalI GATC 6 cut(s) 111, 399, 672, 709, 783, 888
MboI GATC 6 cut(s) 109, 397, 670, 707, 781, 886
MboII GAAGA 6 cut(s) 59, 100, 313, 383, 556, 877
MfeI CAATTG 2 cut(s) 132, 711
MnlI CCTC 9 cut(s) 231, 448, 643, 673, 785, 811, 913, 1078, 1162
MroXI GAANNNNTTC 1 cut(s) 375
MslI CAYNNNNRTG 1 cut(s) 666
MspCI CTTAAG 2 cut(s) 503, 625
MspI CCGG 1 cut(s) 1166
MssI GTTTAAAC 1 cut(s) 615
MunI CAATTG 2 cut(s) 132, 711
Mva1269I GAATGC 1 cut(s) 690
NdeII GATC 6 cut(s) 109, 397, 670, 707, 781, 886
NlaIII CATG 6 cut(s) 67, 227, 568, 668, 946, 1067
NlaIV GGNNCC 1 cut(s) 459
NmuCI GTSAC 1 cut(s) 19
NspI RCATGY 2 cut(s) 67, 568
PaeI GCATGC 1 cut(s) 568
PaeR7I CTCGAG 1 cut(s) 992
PagI TCATGA 1 cut(s) 223
PceI AGGCCT 1 cut(s) 795
PctI GAATGC 1 cut(s) 690
PdmI GAANNNNTTC 1 cut(s) 375
PfeI GAWTC 2 cut(s) 877, 923
PkrI GCNGC 3 cut(s) 1077, 1147, 1154
PmeI GTTTAAAC 1 cut(s) 615
PpuMI RGGWCCY 1 cut(s) 12
PshBI ATTAAT 1 cut(s) 432
Psp1406I AACGTT 1 cut(s) 55
Psp5II RGGWCCY 1 cut(s) 12
PspN4I GGNNCC 1 cut(s) 459
PspPI GGNCC 2 cut(s) 12, 621
PspPPI RGGWCCY 1 cut(s) 12
PstNI CAGNNNCTG 1 cut(s) 1094
RsaI GTAC 2 cut(s) 894, 960
RsaNI GTAC 2 cut(s) 893, 959
RseI CAYNNNNRTG 1 cut(s) 666
SatI GCNGC 3 cut(s) 1076, 1146, 1153
Sau3AI GATC 6 cut(s) 109, 397, 670, 707, 781, 886
Sau96I GGNCC 2 cut(s) 12, 621
SfaNI GCATC 2 cut(s) 639, 919
Sfr274I CTCGAG 1 cut(s) 992
SinI GGWCC 2 cut(s) 12, 621
SlaI CTCGAG 1 cut(s) 992
SmiMI CAYNNNNRTG 1 cut(s) 666
SmlI CTYRAG 3 cut(s) 503, 625, 992
SmoI CTYRAG 3 cut(s) 503, 625, 992
SphI GCATGC 1 cut(s) 568
SseBI AGGCCT 1 cut(s) 795
SsiI CCGC 1 cut(s) 932
SspI AATATT 1 cut(s) 587
SspMI CTAG 3 cut(s) 416, 696, 732
StuI AGGCCT 1 cut(s) 795
StyI CCWWGG 1 cut(s) 755
TaaI ACNGT 1 cut(s) 963
TaiI ACGT 1 cut(s) 58
TaqI TCGA 4 cut(s) 369, 495, 951, 993
TfiI GAWTC 2 cut(s) 877, 923
TscAI CASTG 2 cut(s) 680, 1019
TseFI GTSAC 1 cut(s) 19
TseI GCWGC 3 cut(s) 1075, 1145, 1152
Tsp45I GTSAC 1 cut(s) 19
TspDTI ATGAA 8 cut(s) 114, 227, 234, 240, 282, 418, 572, 799
TspGWI ACGGA 1 cut(s) 184
TspRI CASTG 2 cut(s) 680, 1019
Vha464I CTTAAG 2 cut(s) 503, 625
VpaK11BI GGWCC 2 cut(s) 12, 621
VspI ATTAAT 1 cut(s) 432
XagI CCTNNNNNAGG 1 cut(s) 887
XapI RAATTY 7 cut(s) 102, 227, 347, 374, 521, 534, 1136
XbaI TCTAGA 1 cut(s) 415
XceI RCATGY 2 cut(s) 67, 568
XhoI CTCGAG 1 cut(s) 992
XmiI GTMKAC 1 cut(s) 124
XmnI GAANNNNTTC 1 cut(s) 375
XspI CTAG 3 cut(s) 416, 696, 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.