Rroxscaffold_2G00095850

Diacylglycerol kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
17202797 .. 17208149
5353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00095850.1

Sequence Viewer

Length: 1065 bp
ATGCAATCCCACCGGTCGCATTGTGCTCTTTGCGTAATGGGTCAGCCACCGTGGATTTTTGCTGTTTTGGAAGAGAAGTCTGATACGAAGAAAAAAGTAAAGGCACATGACCCTGAGAGGGTGCTAAAGGATGTTTATGGCACTTTAGAAAAGCTTAAGCGTAAAGGATATGGTTTTGCTGATGAACTTCAAAAGACGATGACGGTTATAATTGTTGGTGGTGATTCTGTGGCTAACTGGATTTTGGGAGTTATCTGTGATCTAAAATTGCCGGAGTTACCCTCCATTGCTCCAATTCCGCTGCAAACCATTTCTCCTATTCGTGGTAGCATCTCAAGTTCCTTTGGATGGATTGAGGAATATGGTCTAGTGTCTGTATTTGTACTTTTGTCACTGTACTTAGAAAGAAACTGGAGAGGAGTAGCTGCACTTAGGAGCATTTCTCCTGATGATCCAGTGAAATTGTCCCTGCTAGATGATAATCTCAAATTGCTTGGAGGGTTTTGGAACTACTTCAGCTTGGAAGTTGATGCTCTCCGACAATATGGAAATCACTGCTTTCATTCTACTGGAAGGACCTTATCATCAGTTGCAAATATAAAGGTTATGAAACAACTTGGTCAGTGGGATAAACTTGATATTACTAGCGGCATCAGGTCAATCCTTTGTTTTAACTCGTCTAGACCGCAAATTATGAAGAAAGATCGGAAAGAGGTACGGGGAATTCGTTTCGAGTTTATTGATGGTGAAGAAGAGGTTGTCAACATGACAATTGATGGAACACCATGGGAGAATATCCCACTGGATGGTACTGGTATCACTGTAATTGAAATCACTCATCACTGTCAAGTCAACATTCTCGCCAATCCATATTGTGATTGCCCACCAAAAAGAATCCAGGATCAGGTGGTGATGAATGATGCTTTTGAAAATGATGATGAGAACAATGCTAAAGATTACTCTGAACGACATAAGAAGTTTGGTGCAGCAAGCACTTTCAAATTTGCCTGTTCTGATGAAGGACAAGAAACCTATGGTGAAGCAAGCACTTCCAACGTCCTCTAA

Protein Analysis

354

Amino Acids

39.75

Weight (kDa)

5.69

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000202)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28130
fragaria_vesca FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230 FvH4_6g29230
malus_domestica MD17G1216600.v1.1
prunus_persica Prupe.3G175700_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175800_v2.0.a1 Prupe.3G175900_v2.0.a1 Prupe.3G176000_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.3G176200_v2.0.a1 Prupe.8G030500_v2.0.a1 Prupe.8G030500_v2.0.a1
pyrus_communis pycom17g22110
rosa_chinensis RchiOBHm_Chr1g0372981 RchiOBHm_Chr2g0112801 RchiOBHm_Chr2g0151871 RchiOBHm_Chr2g0151881 RchiOBHm_Chr2g0151891 RchiOBHm_Chr2g0151901 RchiOBHm_Chr2g0151911 RchiOBHm_Chr2g0151921 RchiOBHm_Chr2g0152191 RchiOBHm_Chr2g0152201 RchiOBHm_Chr2g0152211 RchiOBHm_Chr7g0229501 RchiOBHm_Chr7g0229661 RchiOBHm_Chr7g0229861 RchiOBHm_Chr7g0229991 RchiOBHm_Chr7g0230141
rosa_laevigata RLG00000018011 RLG00000018012 RLG00000020585 RLG00000020586 RLG00000020587 RLG00000020616
rosa_multiflora Rmu_co8278997.1_g000001 Rmu_sc0000693.1_g000084 Rmu_sc0000851.1_g000003 Rmu_sc0000851.1_g000022 Rmu_sc0001552.1_g000055 Rmu_sc0001621.1_g000002 Rmu_sc0001708.1_g000015 Rmu_sc0001708.1_g000016 Rmu_sc0001836.1_g000045 Rmu_sc0002351.1_g000009 Rmu_sc0002351.1_g000011 Rmu_sc0002351.1_g000063 Rmu_sc0002666.1_g000014 Rmu_sc0003043.1_g000011 Rmu_sc0004929.1_g000004 Rmu_sc0005294.1_g000007 Rmu_sc0005294.1_g000016 Rmu_sc0005791.1_g000002 Rmu_sc0021251.1_g000001 Rmu_sc0023925.1_g000004 Rmu_sc0034442.1_g000001
rosa_roxburghii Rroxscaffold_2G00095850 Rroxscaffold_2G00096120 Rroxscaffold_2G00131130 Rroxscaffold_2G00132310 Rroxscaffold_3G00230340
rosa_rugosa Rorug02G0174300 Rorug02G0174400 Rorug02G0182700 Rorug02G0429300 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429400 Rorug02G0429500 Rorug02G0431300 Rorug02G0431300 Rorug07G0258400 Rorug07G0258400 Rorug07G0258600 Rorug07G0259000 Rorug07G0259400
rosa_samantha Rh1BG314200 Rh1CG329100 Rh1DG131500 Rh1DG345900 Rh2AG227100 Rh2AG490100 Rh2AG490300 Rh2AG492700 Rh2AG493200 Rh2BG238900 Rh2BG251200 Rh2BG502800 Rh2BG505300 Rh2CG476400 Rh2CG476600 Rh2CG479100 Rh2CG597400 Rh2DG234700 Rh2DG244900 Rh2DG257400 Rh2DG514000 Rh2DG516500 Rh4DG198400 Rh5BG245300 Rh5BG245400 Rh5BG245500 Rh7AG408200 Rh7CG427400 Rh7CG427500 Rh7DG404000 Rh7DG404700 Rh7DG405300
rosa_wichuraiana Rw0G020250 Rw0G020260 Rw2G017530 Rw2G018370 Rw2G018410 Rw2G018560 Rw2G040190 Rw2G040310 Rw2G040490 Rw7G033910 Rw7G034050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 209
AccB7I CCANNNNNTGG 1 cut(s) 806
AciI CCGC 3 cut(s) 299, 648, 686
AclWI GGATC 2 cut(s) 446, 909
AcsI RAATTY 2 cut(s) 723, 1001
AcuI CTGAAG 1 cut(s) 499
AfaI GTAC 4 cut(s) 384, 398, 717, 811
AfiI CCNNNNNNNGG 5 cut(s) 118, 323, 348, 806, 904
AflII CTTAAG 1 cut(s) 155
AgeI ACCGGT 1 cut(s) 12
AgsI TTSAA 4 cut(s) 191, 830, 929, 1000
AjnI CCWGG 1 cut(s) 897
AluBI AGCT 3 cut(s) 154, 425, 519
AluI AGCT 3 cut(s) 154, 425, 519
Alw21I GWGCWC 1 cut(s) 28
AlwI GGATC 2 cut(s) 446, 909
ApeKI GCWGC 3 cut(s) 301, 425, 986
ApoI RAATTY 2 cut(s) 723, 1001
AsiGI ACCGGT 1 cut(s) 12
Asp700I GAANNNNTTC 1 cut(s) 512
AspS9I GGNCC 1 cut(s) 576
AsuHPI GGTGA 4 cut(s) 233, 758, 922, 1049
AvaII GGWCC 1 cut(s) 576
Bbv12I GWGCWC 1 cut(s) 28
BbvI GCAGC 3 cut(s) 288, 412, 998
BccI CCATC 4 cut(s) 342, 737, 770, 800
BciT130I CCWGG 1 cut(s) 899
BfaI CTAG 4 cut(s) 368, 473, 645, 681
BfrI CTTAAG 1 cut(s) 155
BisI GCNGC 4 cut(s) 302, 426, 649, 987
BlsI GCNGC 4 cut(s) 303, 427, 650, 988
Bme1390I CCNGG 1 cut(s) 899
Bme18I GGWCC 1 cut(s) 576
BmgT120I GGNCC 1 cut(s) 576
BmrFI CCNGG 1 cut(s) 899
BmsI GCATC 4 cut(s) 339, 520, 660, 910
BplI GAGNNNNNCTC 4 cut(s) 266, 298, 427, 459
BpmI CTGGAG 1 cut(s) 433
BpuEI CTTGAG 1 cut(s) 319
BsaBI GATNNNNATC 1 cut(s) 480
BsaJI CCNNGG 2 cut(s) 50, 785
BsaWI WCCGGW 1 cut(s) 12
BsaXI ACNNNNNCTCC 2 cut(s) 298, 328
Bsc4I CCNNNNNNNGG 5 cut(s) 118, 323, 348, 806, 904
Bse118I RCCGGY 1 cut(s) 12
Bse1I ACTGG 6 cut(s) 242, 416, 455, 574, 807, 817
Bse3DI GCAATG 1 cut(s) 285
Bse8I GATNNNNATC 1 cut(s) 480
BseBI CCWGG 1 cut(s) 899
BseDI CCNNGG 2 cut(s) 50, 785
BseGI GGATG 3 cut(s) 136, 353, 811
BseJI GATNNNNATC 1 cut(s) 480
BseLI CCNNNNNNNGG 5 cut(s) 118, 323, 348, 806, 904
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 1 cut(s) 105
BseNI ACTGG 6 cut(s) 242, 416, 455, 574, 807, 817
BseRI GAGGAG 1 cut(s) 432
BseXI GCAGC 3 cut(s) 288, 412, 998
BsgI GTGCAG 2 cut(s) 411, 1005
Bsh1285I CGRYCG 1 cut(s) 17
BshTI ACCGGT 1 cut(s) 12
BsiEI CGRYCG 1 cut(s) 17
BsiHKAI GWGCWC 1 cut(s) 28
BsiSI CCGG 2 cut(s) 13, 272
BslFI GGGAC 1 cut(s) 451
BslI CCNNNNNNNGG 5 cut(s) 118, 323, 348, 806, 904
BsmFI GGGAC 1 cut(s) 451
Bsp1286I GDGCHC 1 cut(s) 28
Bsp143I GATC 4 cut(s) 259, 451, 703, 901
Bsp19I CCATGG 1 cut(s) 785
BspACI CCGC 3 cut(s) 299, 648, 686
BspCNI CTCAG 1 cut(s) 106
BspPI GGATC 2 cut(s) 446, 909
BspTI CTTAAG 1 cut(s) 155
BsrDI GCAATG 1 cut(s) 285
BsrFI RCCGGY 1 cut(s) 12
BsrI ACTGG 6 cut(s) 242, 416, 455, 574, 807, 817
BssAI RCCGGY 1 cut(s) 12
BssECI CCNNGG 2 cut(s) 50, 785
BssMI GATC 4 cut(s) 259, 451, 703, 901
BssT1I CCWWGG 1 cut(s) 785
Bst2UI CCWGG 1 cut(s) 899
Bst4CI ACNGT 5 cut(s) 51, 205, 396, 823, 845
Bst6I CTCTTC 2 cut(s) 66, 747
BstAFI CTTAAG 1 cut(s) 155
BstC8I GCNNGC 2 cut(s) 991, 1045
BstDEI CTNAG 3 cut(s) 114, 400, 431
BstDSI CCRYGG 2 cut(s) 50, 785
BstF5I GGATG 3 cut(s) 136, 353, 811
BstKTI GATC 4 cut(s) 262, 454, 706, 904
BstMBI GATC 4 cut(s) 259, 451, 703, 901
BstMCI CGRYCG 1 cut(s) 17
BstNI CCWGG 1 cut(s) 899
BstSCI CCNGG 1 cut(s) 897
BstV1I GCAGC 3 cut(s) 288, 412, 998
BtgI CCRYGG 2 cut(s) 50, 785
BtsCI GGATG 3 cut(s) 136, 353, 811
BtsI GCAGTG 1 cut(s) 553
BtsIMutI CAGTG 7 cut(s) 392, 462, 553, 629, 800, 819, 841
Cac8I GCNNGC 2 cut(s) 991, 1045
Cfr10I RCCGGY 1 cut(s) 12
Cfr13I GGNCC 1 cut(s) 576
Csp6I GTAC 4 cut(s) 383, 397, 716, 810
CspAI ACCGGT 1 cut(s) 12
CviAII CATG 3 cut(s) 107, 766, 786
CviJI RGCY 5 cut(s) 46, 154, 233, 425, 519
CviKI_1 RGCY 5 cut(s) 46, 154, 233, 425, 519
CviQI GTAC 4 cut(s) 383, 397, 716, 810
DdeI CTNAG 3 cut(s) 114, 400, 431
DpnI GATC 4 cut(s) 261, 453, 705, 903
DpnII GATC 4 cut(s) 259, 451, 703, 901
Eam1104I CTCTTC 2 cut(s) 66, 747
EarI CTCTTC 2 cut(s) 66, 747
Eco130I CCWWGG 1 cut(s) 785
Eco47I GGWCC 1 cut(s) 576
Eco57I CTGAAG 1 cut(s) 499
EcoO109I RGGNCCY 1 cut(s) 576
EcoRI GAATTC 1 cut(s) 723
EcoRII CCWGG 1 cut(s) 897
EcoT14I CCWWGG 1 cut(s) 785
ErhI CCWWGG 1 cut(s) 785
FaeI CATG 3 cut(s) 110, 769, 789
FaqI GGGAC 1 cut(s) 451
FatI CATG 3 cut(s) 106, 765, 785
Fnu4HI GCNGC 4 cut(s) 302, 426, 649, 987
FokI GGATG 3 cut(s) 143, 360, 818
Fsp4HI GCNGC 4 cut(s) 302, 426, 649, 987
FspBI CTAG 4 cut(s) 368, 473, 645, 681
GluI GCNGC 4 cut(s) 302, 426, 649, 987
GsuI CTGGAG 1 cut(s) 433
HapII CCGG 2 cut(s) 13, 272
Hin1II CATG 3 cut(s) 110, 769, 789
HincII GTYRAC 2 cut(s) 763, 853
HindII GTYRAC 2 cut(s) 763, 853
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 2 cut(s) 224, 894
HpaII CCGG 2 cut(s) 13, 272
HphI GGTGA 4 cut(s) 233, 758, 922, 1049
Hpy166II GTNNAC 2 cut(s) 763, 853
Hpy188I TCNGA 5 cut(s) 82, 539, 708, 964, 1015
Hpy188III TCNNGA 2 cut(s) 446, 681
Hpy8I GTNNAC 2 cut(s) 763, 853
HpyAV CCTTC 2 cut(s) 567, 1013
HpyCH4III ACNGT 5 cut(s) 51, 205, 396, 823, 845
HpyCH4IV ACGT 1 cut(s) 1056
HpyCH4V TGCA 5 cut(s) 4, 304, 428, 593, 986
HpyF3I CTNAG 3 cut(s) 114, 400, 431
HpySE526I ACGT 1 cut(s) 1056
Hsp92II CATG 3 cut(s) 110, 769, 789
Kzo9I GATC 4 cut(s) 259, 451, 703, 901
LmnI GCTCC 2 cut(s) 295, 435
Lsp1109I GCAGC 3 cut(s) 288, 412, 998
LweI GCATC 4 cut(s) 339, 520, 660, 910
MaeI CTAG 4 cut(s) 368, 473, 645, 681
MaeII ACGT 1 cut(s) 1056
MaeIII GTNAC 2 cut(s) 276, 390
MalI GATC 4 cut(s) 261, 453, 705, 903
MboI GATC 4 cut(s) 259, 451, 703, 901
MboII GAAGA 5 cut(s) 83, 100, 709, 761, 764
MfeI CAATTG 1 cut(s) 771
MhlI GDGCHC 1 cut(s) 28
MmeI TCCRAC 1 cut(s) 562
MnlI CCTC 7 cut(s) 111, 292, 349, 410, 491, 706, 748
MroXI GAANNNNTTC 1 cut(s) 512
MseI TTAA 2 cut(s) 156, 672
MspA1I CMGCKG 1 cut(s) 301
MspCI CTTAAG 1 cut(s) 155
MspI CCGG 2 cut(s) 13, 272
MspR9I CCNGG 1 cut(s) 899
MunI CAATTG 1 cut(s) 771
MvaI CCWGG 1 cut(s) 899
NcoI CCATGG 1 cut(s) 785
NdeII GATC 4 cut(s) 259, 451, 703, 901
NlaIII CATG 3 cut(s) 110, 769, 789
NmuCI GTSAC 1 cut(s) 390
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PdmI GAANNNNTTC 1 cut(s) 512
PfeI GAWTC 2 cut(s) 224, 894
PflMI CCANNNNNTGG 1 cut(s) 806
PfoI TCCNGGA 1 cut(s) 897
PinAI ACCGGT 1 cut(s) 12
PkrI GCNGC 4 cut(s) 303, 427, 650, 988
PpuMI RGGWCCY 1 cut(s) 576
PsiI TTATAA 1 cut(s) 209
Psp5II RGGWCCY 1 cut(s) 576
Psp6I CCWGG 1 cut(s) 897
PspGI CCWGG 1 cut(s) 897
PspPI GGNCC 1 cut(s) 576
PspPPI RGGWCCY 1 cut(s) 576
RsaI GTAC 4 cut(s) 384, 398, 717, 811
RsaNI GTAC 4 cut(s) 383, 397, 716, 810
SaqAI TTAA 2 cut(s) 156, 672
SatI GCNGC 4 cut(s) 302, 426, 649, 987
Sau3AI GATC 4 cut(s) 259, 451, 703, 901
Sau96I GGNCC 1 cut(s) 576
ScrFI CCNGG 1 cut(s) 899
SduI GDGCHC 1 cut(s) 28
SfaNI GCATC 4 cut(s) 339, 520, 660, 910
SinI GGWCC 1 cut(s) 576
SmlI CTYRAG 2 cut(s) 155, 334
SmoI CTYRAG 2 cut(s) 155, 334
SsiI CCGC 3 cut(s) 299, 648, 686
SspMI CTAG 4 cut(s) 368, 473, 645, 681
StyD4I CCNGG 1 cut(s) 897
StyI CCWWGG 1 cut(s) 785
TaaI ACNGT 5 cut(s) 51, 205, 396, 823, 845
TaiI ACGT 1 cut(s) 1059
TaqI TCGA 1 cut(s) 732
TatI WGTACW 2 cut(s) 382, 396
TauI GCSGC 1 cut(s) 651
TfiI GAWTC 2 cut(s) 224, 894
Tru1I TTAA 2 cut(s) 156, 672
Tru9I TTAA 2 cut(s) 156, 672
TscAI CASTG 7 cut(s) 399, 462, 560, 629, 807, 826, 848
TseFI GTSAC 1 cut(s) 390
TseI GCWGC 3 cut(s) 301, 425, 986
Tsp45I GTSAC 1 cut(s) 390
TspDTI ATGAA 6 cut(s) 198, 551, 623, 710, 929, 1032
TspRI CASTG 7 cut(s) 399, 462, 560, 629, 807, 826, 848
Van91I CCANNNNNTGG 1 cut(s) 806
Vha464I CTTAAG 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 576
XapI RAATTY 2 cut(s) 723, 1001
XbaI TCTAGA 1 cut(s) 680
XmnI GAANNNNTTC 1 cut(s) 512
XspI CTAG 4 cut(s) 368, 473, 645, 681
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.