Fasciclin-like arabinogalactan protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Fasciclin | PF02469 | 215 - 314 | 3.5e-06 | Fasciclin domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 689 |
| AatII | GACGTC | 2 cut(s) | 371, 855 |
| AccB1I | GGYRCC | 2 cut(s) | 323, 517 |
| AccI | GTMKAC | 2 cut(s) | 417, 465 |
| AccII | CGCG | 5 cut(s) | 321, 584, 629, 674, 704 |
| AclWI | GGATC | 2 cut(s) | 325, 993 |
| AcoI | YGGCCR | 4 cut(s) | 18, 560, 678, 879 |
| AcyI | GRCGYC | 4 cut(s) | 368, 518, 687, 852 |
| AfaI | GTAC | 2 cut(s) | 269, 861 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 142, 427, 468, 655, 910 |
| AgeI | ACCGGT | 1 cut(s) | 468 |
| AgsI | TTSAA | 1 cut(s) | 646 |
| AjiI | CACGTC | 2 cut(s) | 745, 765 |
| AjnI | CCWGG | 1 cut(s) | 693 |
| AluBI | AGCT | 3 cut(s) | 9, 160, 634 |
| AluI | AGCT | 3 cut(s) | 9, 160, 634 |
| Alw26I | GTCTC | 1 cut(s) | 947 |
| AlwI | GGATC | 2 cut(s) | 325, 993 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 340, 600 |
| AoxI | GGCC | 9 cut(s) | 18, 144, 175, 241, 495, 522, 560, 678, 879 |
| ApaI | GGGCCC | 1 cut(s) | 245 |
| ApeKI | GCWGC | 5 cut(s) | 600, 631, 757, 802, 1028 |
| AsiGI | ACCGGT | 1 cut(s) | 468 |
| AspLEI | GCGC | 8 cut(s) | 173, 520, 586, 631, 661, 757, 784, 1004 |
| AspS9I | GGNCC | 6 cut(s) | 145, 241, 242, 523, 591, 889 |
| AsuC2I | CCSGG | 1 cut(s) | 752 |
| AsuHPI | GGTGA | 6 cut(s) | 3, 43, 142, 352, 460, 970 |
| AvaII | GGWCC | 2 cut(s) | 591, 889 |
| BaeGI | GKGCMC | 1 cut(s) | 245 |
| BanI | GGYRCC | 2 cut(s) | 323, 517 |
| BanII | GRGCYC | 1 cut(s) | 245 |
| BbvCI | CCTCAGC | 1 cut(s) | 587 |
| BbvI | GCAGC | 5 cut(s) | 587, 643, 744, 789, 1015 |
| BccI | CCATC | 5 cut(s) | 212, 407, 838, 989, 1010 |
| BceAI | ACGGC | 5 cut(s) | 56, 446, 547, 672, 674 |
| BciT130I | CCWGG | 1 cut(s) | 695 |
| BclI | TGATCA | 1 cut(s) | 450 |
| BcnI | CCSGG | 1 cut(s) | 752 |
| BcoDI | GTCTC | 1 cut(s) | 947 |
| BfoI | RGCGCY | 6 cut(s) | 174, 521, 662, 758, 785, 1005 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 559 |
| BglII | AGATCT | 1 cut(s) | 772 |
| Bme1390I | CCNGG | 2 cut(s) | 695, 752 |
| Bme18I | GGWCC | 2 cut(s) | 591, 889 |
| BmgBI | CACGTC | 2 cut(s) | 745, 765 |
| BmgT120I | GGNCC | 6 cut(s) | 145, 241, 242, 523, 591, 889 |
| BmiI | GGNNCC | 5 cut(s) | 243, 325, 513, 519, 525 |
| BmrFI | CCNGG | 2 cut(s) | 695, 752 |
| BmsI | GCATC | 2 cut(s) | 565, 933 |
| BpmI | CTGGAG | 3 cut(s) | 140, 151, 248 |
| Bpu10I | CCTNAGC | 2 cut(s) | 587, 899 |
| BpuMI | CCSGG | 1 cut(s) | 752 |
| Bsa29I | ATCGAT | 1 cut(s) | 402 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1071 |
| BsaHI | GRCGYC | 4 cut(s) | 368, 518, 687, 852 |
| BsaJI | CCNNGG | 4 cut(s) | 15, 141, 319, 384 |
| BsaWI | WCCGGW | 3 cut(s) | 468, 735, 874 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 104, 134, 237, 260, 267, 290 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 142, 427, 468, 655, 910 |
| Bse118I | RCCGGY | 3 cut(s) | 173, 468, 520 |
| Bse1I | ACTGG | 2 cut(s) | 235, 265 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1071 |
| BseBI | CCWGG | 1 cut(s) | 695 |
| BseCI | ATCGAT | 1 cut(s) | 402 |
| BseDI | CCNNGG | 4 cut(s) | 15, 141, 319, 384 |
| BseJI | GATNNNNATC | 1 cut(s) | 1071 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 142, 427, 468, 655, 910 |
| BseMII | CTCAG | 2 cut(s) | 578, 890 |
| BseNI | ACTGG | 2 cut(s) | 235, 265 |
| BseRI | GAGGAG | 9 cut(s) | 23, 38, 49, 52, 55, 89, 251, 305, 986 |
| BseSI | GKGCMC | 1 cut(s) | 245 |
| BseX3I | CGGCCG | 2 cut(s) | 560, 678 |
| BseXI | GCAGC | 5 cut(s) | 587, 643, 744, 789, 1015 |
| Bsh1236I | CGCG | 5 cut(s) | 321, 584, 629, 674, 704 |
| Bsh1285I | CGRYCG | 5 cut(s) | 469, 563, 576, 681, 740 |
| BshFI | GGCC | 9 cut(s) | 20, 146, 177, 243, 497, 524, 562, 680, 881 |
| BshNI | GGYRCC | 2 cut(s) | 323, 517 |
| BshTI | ACCGGT | 1 cut(s) | 468 |
| BshVI | ATCGAT | 1 cut(s) | 402 |
| BsiEI | CGRYCG | 5 cut(s) | 469, 563, 576, 681, 740 |
| BsiSI | CCGG | 9 cut(s) | 129, 174, 218, 469, 515, 521, 736, 752, 875 |
| BslFI | GGGAC | 3 cut(s) | 734, 808, 839 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 142, 427, 468, 655, 910 |
| BsmAI | GTCTC | 1 cut(s) | 947 |
| BsmBI | CGTCTC | 1 cut(s) | 947 |
| BsmFI | GGGAC | 3 cut(s) | 734, 808, 839 |
| BsnI | GGCC | 9 cut(s) | 20, 146, 177, 243, 497, 524, 562, 680, 881 |
| Bsp120I | GGGCCC | 1 cut(s) | 241 |
| Bsp1286I | GDGCHC | 1 cut(s) | 245 |
| Bsp143I | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| Bsp19I | CCATGG | 2 cut(s) | 15, 141 |
| BspANI | GGCC | 9 cut(s) | 20, 146, 177, 243, 497, 524, 562, 680, 881 |
| BspCNI | CTCAG | 2 cut(s) | 579, 891 |
| BspDI | ATCGAT | 1 cut(s) | 402 |
| BspFNI | CGCG | 5 cut(s) | 321, 584, 629, 674, 704 |
| BspLI | GGNNCC | 5 cut(s) | 243, 325, 513, 519, 525 |
| BspPI | GGATC | 2 cut(s) | 325, 993 |
| BspT107I | GGYRCC | 2 cut(s) | 323, 517 |
| BsrFI | RCCGGY | 3 cut(s) | 173, 468, 520 |
| BsrI | ACTGG | 2 cut(s) | 235, 265 |
| BssAI | RCCGGY | 3 cut(s) | 173, 468, 520 |
| BssECI | CCNNGG | 4 cut(s) | 15, 141, 319, 384 |
| BssMI | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| BssNI | GRCGYC | 4 cut(s) | 368, 518, 687, 852 |
| BssT1I | CCWWGG | 2 cut(s) | 15, 141 |
| Bst2UI | CCWGG | 1 cut(s) | 695 |
| Bst4CI | ACNGT | 3 cut(s) | 364, 667, 958 |
| BstACI | GRCGYC | 4 cut(s) | 368, 518, 687, 852 |
| BstC8I | GCNNGC | 6 cut(s) | 162, 175, 499, 522, 935, 966 |
| BstDEI | CTNAG | 2 cut(s) | 587, 899 |
| BstDSI | CCRYGG | 3 cut(s) | 15, 141, 319 |
| BstFNI | CGCG | 5 cut(s) | 321, 584, 629, 674, 704 |
| BstH2I | RGCGCY | 6 cut(s) | 174, 521, 662, 758, 785, 1005 |
| BstHHI | GCGC | 8 cut(s) | 173, 520, 586, 631, 661, 757, 784, 1004 |
| BstKTI | GATC | 9 cut(s) | 333, 453, 531, 609, 775, 831, 886, 988, 1050 |
| BstMAI | GTCTC | 1 cut(s) | 947 |
| BstMBI | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| BstMCI | CGRYCG | 5 cut(s) | 469, 563, 576, 681, 740 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 113, 170, 559, 648, 686, 766, 930, 974, 1037 |
| BstNI | CCWGG | 1 cut(s) | 695 |
| BstSCI | CCNGG | 2 cut(s) | 693, 750 |
| BstSLI | GKGCMC | 1 cut(s) | 245 |
| BstUI | CGCG | 5 cut(s) | 321, 584, 629, 674, 704 |
| BstV1I | GCAGC | 5 cut(s) | 587, 643, 744, 789, 1015 |
| BstX2I | RGATCY | 2 cut(s) | 330, 772 |
| BstYI | RGATCY | 2 cut(s) | 330, 772 |
| BstZI | CGGCCG | 2 cut(s) | 560, 678 |
| Bsu15I | ATCGAT | 1 cut(s) | 402 |
| BsuRI | GGCC | 9 cut(s) | 20, 146, 177, 243, 497, 524, 562, 680, 881 |
| BsuTUI | ATCGAT | 1 cut(s) | 402 |
| BtgI | CCRYGG | 3 cut(s) | 15, 141, 319 |
| BtrI | CACGTC | 2 cut(s) | 745, 765 |
| BtsIMutI | CAGTG | 2 cut(s) | 838, 1075 |
| Cac8I | GCNNGC | 6 cut(s) | 162, 175, 499, 522, 935, 966 |
| CaiI | CAGNNNCTG | 2 cut(s) | 340, 600 |
| CfoI | GCGC | 8 cut(s) | 173, 520, 586, 631, 661, 757, 784, 1004 |
| Cfr10I | RCCGGY | 3 cut(s) | 173, 468, 520 |
| Cfr13I | GGNCC | 6 cut(s) | 145, 241, 242, 523, 591, 889 |
| Cfr42I | CCGCGG | 1 cut(s) | 322 |
| ClaI | ATCGAT | 1 cut(s) | 402 |
| CseI | GACGC | 5 cut(s) | 590, 635, 695, 808, 970 |
| Csp6I | GTAC | 2 cut(s) | 268, 860 |
| CspAI | ACCGGT | 1 cut(s) | 468 |
| CviAII | CATG | 4 cut(s) | 16, 142, 610, 920 |
| CviQI | GTAC | 2 cut(s) | 268, 860 |
| DdeI | CTNAG | 2 cut(s) | 587, 899 |
| DinI | GGCGCC | 1 cut(s) | 519 |
| DpnI | GATC | 9 cut(s) | 332, 452, 530, 608, 774, 830, 885, 987, 1049 |
| DpnII | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 689 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 689 |
| EaeI | YGGCCR | 4 cut(s) | 18, 560, 678, 879 |
| EagI | CGGCCG | 2 cut(s) | 560, 678 |
| EciI | GGCGGA | 5 cut(s) | 58, 94, 204, 283, 537 |
| EclXI | CGGCCG | 2 cut(s) | 560, 678 |
| Eco130I | CCWWGG | 2 cut(s) | 15, 141 |
| Eco24I | GRGCYC | 1 cut(s) | 245 |
| Eco47I | GGWCC | 2 cut(s) | 591, 889 |
| Eco52I | CGGCCG | 2 cut(s) | 560, 678 |
| EcoO109I | RGGNCCY | 1 cut(s) | 889 |
| EcoRII | CCWGG | 1 cut(s) | 693 |
| EcoT14I | CCWWGG | 2 cut(s) | 15, 141 |
| EcoT38I | GRGCYC | 1 cut(s) | 245 |
| EgeI | GGCGCC | 1 cut(s) | 519 |
| EheI | GGCGCC | 1 cut(s) | 519 |
| ErhI | CCWWGG | 2 cut(s) | 15, 141 |
| Esp3I | CGTCTC | 1 cut(s) | 947 |
| FaeI | CATG | 4 cut(s) | 19, 145, 613, 923 |
| FaiI | YATR | 5 cut(s) | 17, 143, 611, 921, 1023 |
| FaqI | GGGAC | 3 cut(s) | 734, 808, 839 |
| FatI | CATG | 4 cut(s) | 15, 141, 609, 919 |
| FauI | CCCGC | 2 cut(s) | 202, 290 |
| FbaI | TGATCA | 1 cut(s) | 450 |
| FblI | GTMKAC | 2 cut(s) | 417, 465 |
| FriOI | GRGCYC | 1 cut(s) | 245 |
| GlaI | GCGC | 8 cut(s) | 172, 519, 585, 630, 660, 756, 783, 1003 |
| GsuI | CTGGAG | 3 cut(s) | 140, 151, 248 |
| HaeII | RGCGCY | 6 cut(s) | 174, 521, 662, 758, 785, 1005 |
| HaeIII | GGCC | 9 cut(s) | 20, 146, 177, 243, 497, 524, 562, 680, 881 |
| HapII | CCGG | 9 cut(s) | 129, 174, 218, 469, 515, 521, 736, 752, 875 |
| HgaI | GACGC | 5 cut(s) | 590, 635, 695, 808, 970 |
| HhaI | GCGC | 8 cut(s) | 173, 520, 586, 631, 661, 757, 784, 1004 |
| Hin1I | GRCGYC | 4 cut(s) | 368, 518, 687, 852 |
| Hin1II | CATG | 4 cut(s) | 19, 145, 613, 923 |
| Hin6I | GCGC | 8 cut(s) | 171, 518, 584, 629, 659, 755, 782, 1002 |
| HinP1I | GCGC | 8 cut(s) | 171, 518, 584, 629, 659, 755, 782, 1002 |
| HincII | GTYRAC | 2 cut(s) | 418, 466 |
| HindII | GTYRAC | 2 cut(s) | 418, 466 |
| HinfI | GANTC | 3 cut(s) | 43, 337, 349 |
| HpaII | CCGG | 9 cut(s) | 129, 174, 218, 469, 515, 521, 736, 752, 875 |
| HphI | GGTGA | 6 cut(s) | 3, 43, 142, 352, 460, 970 |
| Hpy166II | GTNNAC | 3 cut(s) | 418, 466, 825 |
| Hpy188I | TCNGA | 3 cut(s) | 385, 493, 718 |
| Hpy188III | TCNNGA | 8 cut(s) | 334, 346, 434, 594, 826, 841, 887, 989 |
| Hpy8I | GTNNAC | 3 cut(s) | 418, 466, 825 |
| HpyAV | CCTTC | 3 cut(s) | 99, 238, 812 |
| HpyCH4III | ACNGT | 3 cut(s) | 364, 667, 958 |
| HpyCH4IV | ACGT | 6 cut(s) | 368, 744, 764, 809, 852, 870 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 113, 170, 559, 648, 686, 766, 930, 974, 1037 |
| HpyF3I | CTNAG | 2 cut(s) | 587, 899 |
| HpySE526I | ACGT | 6 cut(s) | 368, 744, 764, 809, 852, 870 |
| Hsp92I | GRCGYC | 4 cut(s) | 368, 518, 687, 852 |
| Hsp92II | CATG | 4 cut(s) | 19, 145, 613, 923 |
| HspAI | GCGC | 8 cut(s) | 171, 518, 584, 629, 659, 755, 782, 1002 |
| KasI | GGCGCC | 1 cut(s) | 517 |
| KroI | GCCGGC | 2 cut(s) | 173, 520 |
| KroNI | GCCGGC | 2 cut(s) | 175, 522 |
| Ksp22I | TGATCA | 1 cut(s) | 450 |
| KspI | CCGCGG | 1 cut(s) | 322 |
| Kzo9I | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| LmnI | GCTCC | 3 cut(s) | 217, 348, 517 |
| Lsp1109I | GCAGC | 5 cut(s) | 587, 643, 744, 789, 1015 |
| LweI | GCATC | 2 cut(s) | 565, 933 |
| MaeII | ACGT | 6 cut(s) | 368, 744, 764, 809, 852, 870 |
| MaeIII | GTNAC | 2 cut(s) | 364, 958 |
| MalI | GATC | 9 cut(s) | 332, 452, 530, 608, 774, 830, 885, 987, 1049 |
| MboI | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| MboII | GAAGA | 3 cut(s) | 199, 223, 1004 |
| MflI | RGATCY | 2 cut(s) | 330, 772 |
| MhlI | GDGCHC | 1 cut(s) | 245 |
| Mly113I | GGCGCC | 1 cut(s) | 518 |
| MlyI | GAGTC | 1 cut(s) | 331 |
| MmeI | TCCRAC | 2 cut(s) | 147, 741 |
| MroNI | GCCGGC | 2 cut(s) | 173, 520 |
| MseI | TTAA | 1 cut(s) | 477 |
| MspA1I | CMGCKG | 1 cut(s) | 321 |
| MspI | CCGG | 9 cut(s) | 129, 174, 218, 469, 515, 521, 736, 752, 875 |
| MspR9I | CCNGG | 2 cut(s) | 695, 752 |
| MvaI | CCWGG | 1 cut(s) | 695 |
| MvnI | CGCG | 5 cut(s) | 321, 584, 629, 674, 704 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 113, 170, 559, 648, 686, 766, 930, 974, 1037 |
| NaeI | GCCGGC | 2 cut(s) | 175, 522 |
| NarI | GGCGCC | 1 cut(s) | 518 |
| NciI | CCSGG | 1 cut(s) | 752 |
| NcoI | CCATGG | 2 cut(s) | 15, 141 |
| NdeII | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| NgoMIV | GCCGGC | 2 cut(s) | 173, 520 |
| NlaIII | CATG | 4 cut(s) | 19, 145, 613, 923 |
| NlaIV | GGNNCC | 5 cut(s) | 243, 325, 513, 519, 525 |
| NmeAIII | GCCGAG | 1 cut(s) | 704 |
| NmuCI | GTSAC | 2 cut(s) | 364, 958 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 678, 806 |
| PdiI | GCCGGC | 2 cut(s) | 175, 522 |
| PfeI | GAWTC | 2 cut(s) | 43, 349 |
| PflFI | GACNNNGTC | 1 cut(s) | 689 |
| PfoI | TCCNGGA | 1 cut(s) | 693 |
| PinAI | ACCGGT | 1 cut(s) | 468 |
| PleI | GAGTC | 1 cut(s) | 331 |
| PluTI | GGCGCC | 1 cut(s) | 521 |
| PpsI | GAGTC | 1 cut(s) | 331 |
| PpuMI | RGGWCCY | 1 cut(s) | 889 |
| Psp5II | RGGWCCY | 1 cut(s) | 889 |
| Psp6I | CCWGG | 1 cut(s) | 693 |
| PspGI | CCWGG | 1 cut(s) | 693 |
| PspN4I | GGNNCC | 5 cut(s) | 243, 325, 513, 519, 525 |
| PspOMI | GGGCCC | 1 cut(s) | 241 |
| PspPI | GGNCC | 6 cut(s) | 145, 241, 242, 523, 591, 889 |
| PspPPI | RGGWCCY | 1 cut(s) | 889 |
| PstNI | CAGNNNCTG | 2 cut(s) | 340, 600 |
| PsuI | RGATCY | 2 cut(s) | 330, 772 |
| PsyI | GACNNNGTC | 1 cut(s) | 689 |
| RsaI | GTAC | 2 cut(s) | 269, 861 |
| RsaNI | GTAC | 2 cut(s) | 268, 860 |
| SacII | CCGCGG | 1 cut(s) | 322 |
| SalI | GTCGAC | 2 cut(s) | 416, 464 |
| SaqAI | TTAA | 1 cut(s) | 477 |
| Sau3AI | GATC | 9 cut(s) | 330, 450, 528, 606, 772, 828, 883, 985, 1047 |
| Sau96I | GGNCC | 6 cut(s) | 145, 241, 242, 523, 591, 889 |
| SchI | GAGTC | 1 cut(s) | 331 |
| ScrFI | CCNGG | 2 cut(s) | 695, 752 |
| SduI | GDGCHC | 1 cut(s) | 245 |
| SfaNI | GCATC | 2 cut(s) | 565, 933 |
| SfoI | GGCGCC | 1 cut(s) | 519 |
| Sfr303I | CCGCGG | 1 cut(s) | 322 |
| SgrBI | CCGCGG | 1 cut(s) | 322 |
| SinI | GGWCC | 2 cut(s) | 591, 889 |
| SspDI | GGCGCC | 1 cut(s) | 517 |
| StyD4I | CCNGG | 2 cut(s) | 693, 750 |
| StyI | CCWWGG | 2 cut(s) | 15, 141 |
| TaaI | ACNGT | 3 cut(s) | 364, 667, 958 |
| TaiI | ACGT | 6 cut(s) | 371, 747, 767, 812, 855, 873 |
| TaqI | TCGA | 9 cut(s) | 180, 186, 402, 417, 465, 605, 624, 786, 813 |
| TaqII | GACCGA | 1 cut(s) | 562 |
| TfiI | GAWTC | 2 cut(s) | 43, 349 |
| Tru1I | TTAA | 1 cut(s) | 477 |
| Tru9I | TTAA | 1 cut(s) | 477 |
| TscAI | CASTG | 1 cut(s) | 838 |
| TseFI | GTSAC | 2 cut(s) | 364, 958 |
| TseI | GCWGC | 5 cut(s) | 600, 631, 757, 802, 1028 |
| Tsp45I | GTSAC | 2 cut(s) | 364, 958 |
| TspDTI | ATGAA | 2 cut(s) | 17, 908 |
| TspGWI | ACGGA | 3 cut(s) | 16, 532, 965 |
| TspRI | CASTG | 1 cut(s) | 838 |
| Tth111I | GACNNNGTC | 1 cut(s) | 689 |
| VpaK11BI | GGWCC | 2 cut(s) | 591, 889 |
| XmiI | GTMKAC | 2 cut(s) | 417, 465 |
| ZraI | GACGTC | 2 cut(s) | 369, 853 |