Rroxscaffold_5G00381850

fasciclin-like arabinogalactan protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000614
Physical Location & Seq
Reverse (-)
61682763 .. 61688848
6086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00381850.1

Sequence Viewer

Length: 1266 bp
ATGGGTCCAATTATTGAAGAGTTTAGTCGCCGTCGCTTACCGTCTTCGCTCCGGCCGACGCCGCCTTCGCCAACTCCGGCCACCCCACTCTCAACCTCCTCCGCTACCACCTCCTCCCCATCGCTTTCCCCTCTCCGATCACTCAAGTCCCTCCCGTTCGGCGCCAAGATCGCCACTCTGCTCGACGGCCAGTCTCTCACCGTCACCACTCTTCCTGCCGACCGCCTCGTCTCGCTCAACAACGTCACCGTCACGGCGGCCCCAATTTTCGACGACGGGTCGTTGATCGTCTTCGGAACCAGCGGATTCTTCGACCGGTATTTCCGGATCTCGGGTCCGATTGGGAGCTACAGCCCCAAGAATCTTGGTTGCTTGGCGCCGCGAAACCCTAACAGAGCGATGGAGGTCGAAACGGCTGCGTATTACCCGTTCAGTGAAGCGAGCAAGGTGCTGAGATCGAAAGGCTGCTCTGTCATGGCTTCGTTTCTTGAAATGCAATTCCATGGGTTTCTCAAGTACCAGATCATGTTGACCGTCTTGGCTCCCGTTGACCAAGTCATGGTGAAGCGGATCGGAAATCTGAGCGAGTACTCGTCGATCTTGCGCCGCCACGTGGTCCCTTGCCGGCTTTCTTGGACCGATTTGAAGAGTCTTGAGGATGGGACTGTGTTGAGGACTAATTTGCAAGGGTTTATGATCAACGTGACTCGATACGACAGCGTTTTTGTGCTCAATGGTGTCCCGGTGATTATGCCGGAGCTGTATCACAACGGCTGGCTTGTGGTTCACGGAATCAGTGAGGTTCTTGAACTTCCAGTGAGCCTAACTCAGAGCCCAATTCCGAGTCAAACGGAGCCAGTGGTGGATACGGTGGATCCGGTGGCTTCTTCACCTCCCCTCTCCGGCACTTCATCGCAGCTCCGTGCTTGTTGCAATGCTGCTAGACTAGCATTTGAATTGCCACCTCAACCAGCAGCAAAAGTAGTAGCAGCATTTGCGGCGCCATTGCCAGGAAAGTCGGCCAAATTCATCATGGCACAGATTGATGTTACCACCGCCCAATTGAGCAATATTGCTCCAGTTAAGAGCTGGCATGGTTTTGGGATCAATCCCAACTGGAGTAATCGCCTTCATACCCTGCACATTCCAATTTGGGTGCTGCATATGCATAATGCCTCGCAGTCATCTCATCCAACAGTTGGGAGTGTTCAATTTACTTTTCCTCCACCTTGGCAGTTACCCAATGAACAAGTTAGACAACACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Fasciclin

Protein Analysis

421

Amino Acids

45.86

Weight (kDa)

9.22

Isoelectric Point (pI)

59.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fasciclin PF02469 175 - 269 8.6e-08 Fasciclin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000614)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G40940
fragaria_vesca FvH4_2g32760 FvH4_4g32150 FvH4_4g32590 FvH4_6g20740 FvH4_6g53540 FvH4_7g12190
malus_domestica MD09G1010600.v1.1 MD13G1026900.v1.1 MD13G1028200.v1.1 MD16G1030000.v1.1 MD16G1031100.v1.1
prunus_persica Prupe.1G322000_v2.0.a1 Prupe.3G306500_v2.0.a1
pyrus_communis pycom01g06180 pycom04g10020 pycom111g00880 pycom13g02560 pycom13g02660 pycom16g02710
rosa_chinensis RchiOBHm_Chr2g0175581 RchiOBHm_Chr4g0440841
rosa_laevigata RLG00000006133 RLG00000006134 RLG00000006144 RLG00000008208 RLG00000019874 RLG00000022341 RLG00000032925 RLG00000036410
rosa_multiflora Rmu_co8113152.1_g000001 Rmu_sc0000424.1_g000015 Rmu_sc0000424.1_g000029 Rmu_sc0000424.1_g000030 Rmu_sc0000424.1_g000031 Rmu_sc0000998.1_g000023 Rmu_sc0005054.1_g000012 Rmu_sc0009386.1_g000004 Rmu_sc0013970.1_g000002 Rmu_sc0027146.1_g000001 Rmu_ssc0000175.1_g000015 Rmu_ssc0000386.1_g000026
rosa_roxburghii Rroxscaffold_2G00077200 Rroxscaffold_5G00381670 Rroxscaffold_5G00381840 Rroxscaffold_5G00381850
rosa_rugosa Rorug03G0261000 Rorug04G0120500 Rorug04G0328900 Rorug04G0329900 Rorug04G0330000 Rorug05G0525900
rosa_samantha Rh1AG187300 Rh1BG153500 Rh1CG172800 Rh2BG270100 Rh2BG676400 Rh2CG639600 Rh2DG690400 Rh3BG272200 Rh4AG380600 Rh4AG381600 Rh4AG381700 Rh4BG393200 Rh4BG395000 Rh4BG395100 Rh4CG053800 Rh4CG194900 Rh4CG408000 Rh4CG409900 Rh4CG410000 Rh5BG280900 Rh7AG473300 Rh7BG247300 Rh7CG108400
rosa_wichuraiana Rw2G054570 Rw4G032740 Rw4G032880 Rw4G032890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 227
AccB1I GGYRCC 3 cut(s) 161, 376, 1000
AccB7I CCANNNNNTGG 2 cut(s) 559, 1199
AccII CGCG 1 cut(s) 382
AccIII TCCGGA 1 cut(s) 324
AclWI GGATC 5 cut(s) 335, 578, 869, 882, 1112
AcoI YGGCCR 4 cut(s) 53, 78, 187, 1020
AcsI RAATTY 1 cut(s) 1025
AcvI CACGTG 1 cut(s) 613
AcyI GRCGYC 4 cut(s) 59, 162, 377, 1001
AfaI GTAC 2 cut(s) 518, 590
AfiI CCNNNNNNNGG 6 cut(s) 331, 559, 613, 902, 1010, 1199
AgeI ACCGGT 1 cut(s) 315
AgsI TTSAA 6 cut(s) 17, 491, 646, 809, 956, 1211
AhdI GACNNNNNGTC 2 cut(s) 190, 277
AjnI CCWGG 1 cut(s) 1009
AluBI AGCT 4 cut(s) 348, 760, 919, 1089
AluI AGCT 4 cut(s) 348, 760, 919, 1089
Alw21I GWGCWC 1 cut(s) 732
Alw26I GTCTC 2 cut(s) 198, 235
AlwI GGATC 5 cut(s) 335, 578, 869, 882, 1112
Ama87I CYCGRG 1 cut(s) 331
Aor13HI TCCGGA 1 cut(s) 324
AoxI GGCC 5 cut(s) 53, 78, 187, 258, 1020
ApeKI GCWGC 7 cut(s) 416, 465, 916, 938, 974, 989, 1159
ApoI RAATTY 1 cut(s) 1025
ArsI GACNNNNNNTTYG 4 cut(s) 49, 81, 707, 739
AsiGI ACCGGT 1 cut(s) 315
AspLEI GCGC 4 cut(s) 164, 379, 606, 1003
AspS9I GGNCC 5 cut(s) 5, 259, 335, 616, 636
AsuC2I CCSGG 1 cut(s) 743
AsuHPI GGTGA 6 cut(s) 190, 196, 238, 574, 757, 882
AvaI CYCGRG 1 cut(s) 331
AvaII GGWCC 4 cut(s) 5, 335, 616, 636
BamHI GGATCC 1 cut(s) 874
BanI GGYRCC 3 cut(s) 161, 376, 1000
BanII GRGCYC 1 cut(s) 836
BbrPI CACGTG 1 cut(s) 613
BbsI GAAGAC 2 cut(s) 36, 283
Bbv12I GWGCWC 1 cut(s) 732
BbvI GCAGC 7 cut(s) 403, 452, 925, 928, 986, 1001, 1146
BccI CCATC 3 cut(s) 127, 394, 653
BceAI ACGGC 5 cut(s) 15, 202, 270, 429, 787
BcgI CGANNNNNNTGC 4 cut(s) 398, 430, 432, 464
BciT130I CCWGG 1 cut(s) 1011
BciVI GTATCC 1 cut(s) 859
BclI TGATCA 1 cut(s) 696
BcnI CCSGG 1 cut(s) 743
BcoDI GTCTC 2 cut(s) 198, 235
BfaI CTAG 2 cut(s) 942, 947
BfmI CTRYAG 1 cut(s) 349
BfoI RGCGCY 3 cut(s) 165, 380, 1004
BfuI GTATCC 1 cut(s) 859
BmcAI AGTACT 1 cut(s) 590
Bme1390I CCNGG 2 cut(s) 743, 1011
Bme18I GGWCC 4 cut(s) 5, 335, 616, 636
BmeRI GACNNNNNGTC 2 cut(s) 190, 277
BmeT110I CYCGRG 1 cut(s) 331
BmgT120I GGNCC 5 cut(s) 5, 259, 335, 616, 636
BmrFI CCNGG 2 cut(s) 743, 1011
BpiI GAAGAC 2 cut(s) 36, 283
BplI GAGNNNNNCTC 2 cut(s) 811, 843
BpmI CTGGAG 2 cut(s) 1062, 1138
BpuEI CTTGAG 3 cut(s) 128, 497, 674
BpuMI CCSGG 1 cut(s) 743
BsaAI YACGTR 1 cut(s) 613
BsaHI GRCGYC 4 cut(s) 59, 162, 377, 1001
BsaJI CCNNGG 2 cut(s) 502, 1229
BsaWI WCCGGW 3 cut(s) 315, 324, 877
BsaXI ACNNNNNCTCC 2 cut(s) 1207, 1237
Bsc4I CCNNNNNNNGG 6 cut(s) 331, 559, 613, 902, 1010, 1199
Bse118I RCCGGY 2 cut(s) 315, 624
Bse1I ACTGG 5 cut(s) 190, 815, 857, 1079, 1121
Bse3DI GCAATG 2 cut(s) 940, 1004
BseAI TCCGGA 1 cut(s) 324
BseBI CCWGG 1 cut(s) 1011
BseDI CCNNGG 2 cut(s) 502, 1229
BseGI GGATG 2 cut(s) 664, 1189
BseLI CCNNNNNNNGG 6 cut(s) 331, 559, 613, 902, 1010, 1199
BseMI GCAATG 2 cut(s) 940, 1004
BseMII CTCAG 3 cut(s) 443, 572, 842
BseNI ACTGG 5 cut(s) 190, 815, 857, 1079, 1121
BseRI GAGGAG 2 cut(s) 88, 103
BseX3I CGGCCG 1 cut(s) 53
BseXI GCAGC 7 cut(s) 403, 452, 925, 928, 986, 1001, 1146
BsgI GTGCAG 1 cut(s) 1124
Bsh1236I CGCG 1 cut(s) 382
Bsh1285I CGRYCG 3 cut(s) 56, 223, 316
BshFI GGCC 5 cut(s) 55, 80, 189, 260, 1022
BshNI GGYRCC 3 cut(s) 161, 376, 1000
BshTI ACCGGT 1 cut(s) 315
BsiEI CGRYCG 3 cut(s) 56, 223, 316
BsiHKAI GWGCWC 1 cut(s) 732
BsiHKCI CYCGRG 1 cut(s) 331
BsiSI CCGG 9 cut(s) 52, 77, 316, 325, 625, 743, 755, 878, 903
BslFI GGGAC 4 cut(s) 133, 602, 676, 725
BslI CCNNNNNNNGG 6 cut(s) 331, 559, 613, 902, 1010, 1199
BsmAI GTCTC 2 cut(s) 198, 235
BsmBI CGTCTC 1 cut(s) 235
BsmFI GGGAC 4 cut(s) 133, 602, 676, 725
BsnI GGCC 5 cut(s) 55, 80, 189, 260, 1022
BsoBI CYCGRG 1 cut(s) 331
Bsp1286I GDGCHC 2 cut(s) 732, 836
Bsp13I TCCGGA 1 cut(s) 324
Bsp19I CCATGG 1 cut(s) 502
BspANI GGCC 5 cut(s) 55, 80, 189, 260, 1022
BspCNI CTCAG 3 cut(s) 444, 573, 841
BspEI TCCGGA 1 cut(s) 324
BspFNI CGCG 1 cut(s) 382
BspPI GGATC 5 cut(s) 335, 578, 869, 882, 1112
BspT107I GGYRCC 3 cut(s) 161, 376, 1000
BsrDI GCAATG 2 cut(s) 940, 1004
BsrFI RCCGGY 2 cut(s) 315, 624
BsrI ACTGG 5 cut(s) 190, 815, 857, 1079, 1121
BssAI RCCGGY 2 cut(s) 315, 624
BssECI CCNNGG 2 cut(s) 502, 1229
BssNI GRCGYC 4 cut(s) 59, 162, 377, 1001
BssT1I CCWWGG 2 cut(s) 502, 1229
Bst2UI CCWGG 1 cut(s) 1011
Bst4CI ACNGT 7 cut(s) 42, 202, 250, 535, 667, 871, 1198
Bst6I CTCTTC 3 cut(s) 12, 216, 641
BstACI GRCGYC 4 cut(s) 59, 162, 377, 1001
BstAPI GCANNNNNTGC 1 cut(s) 995
BstBAI YACGTR 1 cut(s) 613
BstC8I GCNNGC 4 cut(s) 442, 626, 776, 1091
BstDEI CTNAG 3 cut(s) 452, 581, 828
BstDSI CCRYGG 1 cut(s) 502
BstF5I GGATG 2 cut(s) 664, 1189
BstFNI CGCG 1 cut(s) 382
BstH2I RGCGCY 3 cut(s) 165, 380, 1004
BstHHI GCGC 4 cut(s) 164, 379, 606, 1003
BstMAI GTCTC 2 cut(s) 198, 235
BstMCI CGRYCG 3 cut(s) 56, 223, 316
BstMWI GCNNNNNNNGC 7 cut(s) 61, 67, 170, 947, 995, 998, 1165
BstNI CCWGG 1 cut(s) 1011
BstSCI CCNGG 2 cut(s) 741, 1009
BstSFI CTRYAG 1 cut(s) 349
BstUI CGCG 1 cut(s) 382
BstV1I GCAGC 7 cut(s) 403, 452, 925, 928, 986, 1001, 1146
BstV2I GAAGAC 2 cut(s) 36, 283
BstX2I RGATCY 2 cut(s) 327, 874
BstYI RGATCY 2 cut(s) 327, 874
BstZI CGGCCG 1 cut(s) 53
BsuI GTATCC 1 cut(s) 859
BsuRI GGCC 5 cut(s) 55, 80, 189, 260, 1022
BtgI CCRYGG 1 cut(s) 502
BtgZI GCGATG 3 cut(s) 105, 413, 897
BtsCI GGATG 2 cut(s) 664, 1189
BtsIMutI CAGTG 4 cut(s) 439, 802, 822, 864
Cac8I GCNNGC 4 cut(s) 442, 626, 776, 1091
CfoI GCGC 4 cut(s) 164, 379, 606, 1003
Cfr10I RCCGGY 2 cut(s) 315, 624
Cfr13I GGNCC 5 cut(s) 5, 259, 335, 616, 636
CseI GACGC 1 cut(s) 67
Csp6I GTAC 2 cut(s) 517, 589
CspAI ACCGGT 1 cut(s) 315
CviAII CATG 6 cut(s) 475, 503, 526, 559, 1033, 1094
CviQI GTAC 2 cut(s) 517, 589
DdeI CTNAG 3 cut(s) 452, 581, 828
DinI GGCGCC 3 cut(s) 163, 378, 1002
DrdI GACNNNNNNGTC 1 cut(s) 227
DriI GACNNNNNGTC 2 cut(s) 190, 277
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 4 cut(s) 53, 78, 187, 1020
EagI CGGCCG 1 cut(s) 53
Eam1104I CTCTTC 3 cut(s) 12, 216, 641
Eam1105I GACNNNNNGTC 2 cut(s) 190, 277
EarI CTCTTC 3 cut(s) 12, 216, 641
EclXI CGGCCG 1 cut(s) 53
Eco130I CCWWGG 2 cut(s) 502, 1229
Eco24I GRGCYC 1 cut(s) 836
Eco47I GGWCC 4 cut(s) 5, 335, 616, 636
Eco52I CGGCCG 1 cut(s) 53
Eco72I CACGTG 1 cut(s) 613
Eco88I CYCGRG 1 cut(s) 331
EcoRII CCWGG 1 cut(s) 1009
EcoT14I CCWWGG 2 cut(s) 502, 1229
EcoT22I ATGCAT 1 cut(s) 1170
EcoT38I GRGCYC 1 cut(s) 836
EgeI GGCGCC 3 cut(s) 163, 378, 1002
EheI GGCGCC 3 cut(s) 163, 378, 1002
ErhI CCWWGG 2 cut(s) 502, 1229
Esp3I CGTCTC 1 cut(s) 235
FaeI CATG 6 cut(s) 478, 506, 529, 562, 1036, 1097
FaqI GGGAC 4 cut(s) 133, 602, 676, 725
FatI CATG 6 cut(s) 474, 502, 525, 558, 1032, 1093
FauNDI CATATG 1 cut(s) 1164
FbaI TGATCA 1 cut(s) 696
FokI GGATG 2 cut(s) 671, 1176
FriOI GRGCYC 1 cut(s) 836
FspBI CTAG 2 cut(s) 942, 947
GlaI GCGC 4 cut(s) 163, 378, 605, 1002
GsuI CTGGAG 2 cut(s) 1062, 1138
HaeII RGCGCY 3 cut(s) 165, 380, 1004
HaeIII GGCC 5 cut(s) 55, 80, 189, 260, 1022
HapII CCGG 9 cut(s) 52, 77, 316, 325, 625, 743, 755, 878, 903
HgaI GACGC 1 cut(s) 67
HhaI GCGC 4 cut(s) 164, 379, 606, 1003
Hin1I GRCGYC 4 cut(s) 59, 162, 377, 1001
Hin1II CATG 6 cut(s) 478, 506, 529, 562, 1036, 1097
Hin6I GCGC 4 cut(s) 162, 377, 604, 1001
HinP1I GCGC 4 cut(s) 162, 377, 604, 1001
HincII GTYRAC 2 cut(s) 531, 550
HindII GTYRAC 2 cut(s) 531, 550
HinfI GANTC 6 cut(s) 306, 361, 649, 706, 792, 844
HpaII CCGG 9 cut(s) 52, 77, 316, 325, 625, 743, 755, 878, 903
HphI GGTGA 6 cut(s) 190, 196, 238, 574, 757, 882
Hpy166II GTNNAC 3 cut(s) 531, 550, 787
Hpy188I TCNGA 7 cut(s) 137, 296, 339, 575, 582, 831, 843
Hpy188III TCNNGA 4 cut(s) 325, 488, 653, 806
Hpy8I GTNNAC 3 cut(s) 531, 550, 787
Hpy99I CGWCG 6 cut(s) 36, 61, 188, 275, 278, 598
HpyAV CCTTC 2 cut(s) 75, 1139
HpyCH4III ACNGT 7 cut(s) 42, 202, 250, 535, 667, 871, 1198
HpyCH4IV ACGT 3 cut(s) 243, 612, 702
HpyCH4V TGCA 6 cut(s) 496, 685, 933, 1141, 1162, 1168
HpyF10VI GCNNNNNNNGC 7 cut(s) 61, 67, 170, 947, 995, 998, 1165
HpyF3I CTNAG 3 cut(s) 452, 581, 828
HpySE526I ACGT 3 cut(s) 243, 612, 702
Hsp92I GRCGYC 4 cut(s) 59, 162, 377, 1001
Hsp92II CATG 6 cut(s) 478, 506, 529, 562, 1036, 1097
HspAI GCGC 4 cut(s) 162, 377, 604, 1001
KasI GGCGCC 3 cut(s) 161, 376, 1000
Kpn2I TCCGGA 1 cut(s) 324
KroI GCCGGC 1 cut(s) 624
KroNI GCCGGC 1 cut(s) 626
Ksp22I TGATCA 1 cut(s) 696
LmnI GCTCC 7 cut(s) 54, 345, 547, 757, 853, 924, 1081
Lsp1109I GCAGC 7 cut(s) 403, 452, 925, 928, 986, 1001, 1146
MaeI CTAG 2 cut(s) 942, 947
MaeII ACGT 3 cut(s) 243, 612, 702
MaeIII GTNAC 6 cut(s) 202, 244, 250, 703, 1048, 1236
MboII GAAGA 7 cut(s) 29, 36, 203, 283, 301, 658, 879
MfeI CAATTG 1 cut(s) 1061
MflI RGATCY 2 cut(s) 327, 874
MhlI GDGCHC 2 cut(s) 732, 836
Mly113I GGCGCC 3 cut(s) 162, 377, 1001
MlyI GAGTC 3 cut(s) 658, 700, 853
MmeI TCCRAC 1 cut(s) 1217
Mph1103I ATGCAT 1 cut(s) 1170
MroI TCCGGA 1 cut(s) 324
MroNI GCCGGC 1 cut(s) 624
MseI TTAA 1 cut(s) 1083
MspA1I CMGCKG 1 cut(s) 303
MspI CCGG 9 cut(s) 52, 77, 316, 325, 625, 743, 755, 878, 903
MspR9I CCNGG 2 cut(s) 743, 1011
MunI CAATTG 1 cut(s) 1061
MvaI CCWGG 1 cut(s) 1011
MvnI CGCG 1 cut(s) 382
MwoI GCNNNNNNNGC 7 cut(s) 61, 67, 170, 947, 995, 998, 1165
NaeI GCCGGC 1 cut(s) 626
NarI GGCGCC 3 cut(s) 162, 377, 1001
NciI CCSGG 1 cut(s) 743
NcoI CCATGG 1 cut(s) 502
NdeI CATATG 1 cut(s) 1164
NgoMIV GCCGGC 1 cut(s) 624
NlaIII CATG 6 cut(s) 478, 506, 529, 562, 1036, 1097
NmuCI GTSAC 4 cut(s) 202, 244, 250, 703
NsiI ATGCAT 1 cut(s) 1170
PcsI WCGNNNNNNNCGW 1 cut(s) 53
PdiI GCCGGC 1 cut(s) 626
PfeI GAWTC 3 cut(s) 306, 361, 792
PflFI GACNNNGTC 1 cut(s) 554
PflMI CCANNNNNTGG 2 cut(s) 559, 1199
PinAI ACCGGT 1 cut(s) 315
PleI GAGTC 3 cut(s) 657, 700, 852
PluTI GGCGCC 3 cut(s) 165, 380, 1004
PmaCI CACGTG 1 cut(s) 613
PmlI CACGTG 1 cut(s) 613
PpsI GAGTC 3 cut(s) 657, 700, 852
Ppu21I YACGTR 1 cut(s) 613
Psp6I CCWGG 1 cut(s) 1009
PspCI CACGTG 1 cut(s) 613
PspGI CCWGG 1 cut(s) 1009
PspPI GGNCC 5 cut(s) 5, 259, 335, 616, 636
PsrI GAACNNNNNNTAC 2 cut(s) 413, 445
PsuI RGATCY 2 cut(s) 327, 874
PsyI GACNNNGTC 1 cut(s) 554
RsaI GTAC 2 cut(s) 518, 590
RsaNI GTAC 2 cut(s) 517, 589
SaqAI TTAA 1 cut(s) 1083
Sau96I GGNCC 5 cut(s) 5, 259, 335, 616, 636
ScaI AGTACT 1 cut(s) 590
SchI GAGTC 3 cut(s) 658, 700, 853
ScrFI CCNGG 2 cut(s) 743, 1011
SduI GDGCHC 2 cut(s) 732, 836
SfcI CTRYAG 1 cut(s) 349
SfoI GGCGCC 3 cut(s) 163, 378, 1002
SinI GGWCC 4 cut(s) 5, 335, 616, 636
SmlI CTYRAG 3 cut(s) 143, 512, 653
SmoI CTYRAG 3 cut(s) 143, 512, 653
SspDI GGCGCC 3 cut(s) 161, 376, 1000
SspI AATATT 1 cut(s) 1072
SspMI CTAG 2 cut(s) 942, 947
StyD4I CCNGG 2 cut(s) 741, 1009
StyI CCWWGG 2 cut(s) 502, 1229
TaaI ACNGT 7 cut(s) 42, 202, 250, 535, 667, 871, 1198
TaiI ACGT 3 cut(s) 246, 615, 705
TaqI TCGA 7 cut(s) 183, 270, 312, 408, 458, 596, 709
TaqII GACCGA 1 cut(s) 653
TatI WGTACW 1 cut(s) 588
TauI GCSGC 5 cut(s) 64, 260, 382, 609, 1001
TfiI GAWTC 3 cut(s) 306, 361, 792
Tru1I TTAA 1 cut(s) 1083
Tru9I TTAA 1 cut(s) 1083
TscAI CASTG 4 cut(s) 439, 802, 822, 864
TseFI GTSAC 4 cut(s) 202, 244, 250, 703
TseI GCWGC 7 cut(s) 416, 465, 916, 938, 974, 989, 1159
Tsp45I GTSAC 4 cut(s) 202, 244, 250, 703
TspDTI ATGAA 4 cut(s) 900, 1018, 1121, 1260
TspGWI ACGGA 3 cut(s) 804, 866, 911
TspRI CASTG 4 cut(s) 439, 802, 822, 864
Tth111I GACNNNGTC 1 cut(s) 554
Van91I CCANNNNNTGG 2 cut(s) 559, 1199
VpaK11BI GGWCC 4 cut(s) 5, 335, 616, 636
XapI RAATTY 1 cut(s) 1025
XcmI CCANNNNNNNNNTGG 2 cut(s) 1030, 1086
XspI CTAG 2 cut(s) 942, 947
ZrmI AGTACT 1 cut(s) 590
Zsp2I ATGCAT 1 cut(s) 1170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.