PAN-like domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 732 |
| AccB1I | GGYRCC | 1 cut(s) | 856 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 343 |
| AccI | GTMKAC | 1 cut(s) | 1256 |
| AciI | CCGC | 4 cut(s) | 579, 835, 891, 926 |
| AclI | AACGTT | 1 cut(s) | 1098 |
| AclWI | GGATC | 1 cut(s) | 596 |
| AcoI | YGGCCR | 1 cut(s) | 448 |
| AcsI | RAATTY | 5 cut(s) | 661, 688, 744, 841, 979 |
| AcuI | CTGAAG | 2 cut(s) | 222, 1340 |
| AcyI | GRCGYC | 1 cut(s) | 857 |
| AfaI | GTAC | 1 cut(s) | 365 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 343, 578, 834, 1153 |
| AhlI | ACTAGT | 1 cut(s) | 299 |
| AjiI | CACGTC | 1 cut(s) | 816 |
| AjnI | CCWGG | 4 cut(s) | 514, 739, 946, 1269 |
| AluBI | AGCT | 6 cut(s) | 486, 537, 906, 1056, 1143, 1324 |
| AluI | AGCT | 6 cut(s) | 486, 537, 906, 1056, 1143, 1324 |
| Alw26I | GTCTC | 2 cut(s) | 981, 1005 |
| AlwI | GGATC | 1 cut(s) | 596 |
| AoxI | GGCC | 4 cut(s) | 448, 923, 1155, 1267 |
| ApeKI | GCWGC | 5 cut(s) | 350, 903, 906, 928, 1143 |
| ApoI | RAATTY | 5 cut(s) | 661, 688, 744, 841, 979 |
| AseI | ATTAAT | 2 cut(s) | 786, 822 |
| AspLEI | GCGC | 1 cut(s) | 859 |
| AspS9I | GGNCC | 3 cut(s) | 616, 1267, 1273 |
| AsuC2I | CCSGG | 2 cut(s) | 427, 572 |
| AsuHPI | GGTGA | 3 cut(s) | 189, 227, 793 |
| AvaII | GGWCC | 2 cut(s) | 616, 1273 |
| BalI | TGGCCA | 1 cut(s) | 450 |
| BanI | GGYRCC | 1 cut(s) | 856 |
| BbvI | GCAGC | 5 cut(s) | 337, 893, 915, 915, 1130 |
| BccI | CCATC | 4 cut(s) | 84, 320, 514, 1256 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 46, 80 |
| BciT130I | CCWGG | 4 cut(s) | 516, 741, 948, 1271 |
| BclI | TGATCA | 1 cut(s) | 625 |
| BcnI | CCSGG | 2 cut(s) | 427, 572 |
| BcoDI | GTCTC | 2 cut(s) | 981, 1005 |
| BcuI | ACTAGT | 1 cut(s) | 299 |
| BfaI | CTAG | 1 cut(s) | 300 |
| BfmI | CTRYAG | 2 cut(s) | 639, 968 |
| BfoI | RGCGCY | 1 cut(s) | 860 |
| BglII | AGATCT | 1 cut(s) | 1231 |
| BisI | GCNGC | 7 cut(s) | 351, 892, 904, 907, 926, 929, 1144 |
| BlsI | GCNGC | 7 cut(s) | 352, 893, 905, 908, 927, 930, 1145 |
| Bme1390I | CCNGG | 6 cut(s) | 427, 516, 572, 741, 948, 1271 |
| Bme18I | GGWCC | 2 cut(s) | 616, 1273 |
| BmgBI | CACGTC | 1 cut(s) | 816 |
| BmgT120I | GGNCC | 3 cut(s) | 616, 1267, 1273 |
| BmiI | GGNNCC | 3 cut(s) | 431, 858, 1268 |
| BmrFI | CCNGG | 6 cut(s) | 427, 516, 572, 741, 948, 1271 |
| BmrI | ACTGGG | 1 cut(s) | 955 |
| BmsI | GCATC | 3 cut(s) | 337, 992, 1189 |
| BmuI | ACTGGG | 1 cut(s) | 955 |
| BpmI | CTGGAG | 3 cut(s) | 816, 1005, 1197 |
| BpuEI | CTTGAG | 1 cut(s) | 1072 |
| BpuMI | CCSGG | 2 cut(s) | 427, 572 |
| BsaAI | YACGTR | 1 cut(s) | 40 |
| BsaHI | GRCGYC | 1 cut(s) | 857 |
| BsaJI | CCNNGG | 3 cut(s) | 248, 515, 739 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 343, 578, 834, 1153 |
| Bse1I | ACTGG | 5 cut(s) | 371, 605, 799, 961, 1147 |
| BseBI | CCWGG | 4 cut(s) | 516, 741, 948, 1271 |
| BseDI | CCNNGG | 3 cut(s) | 248, 515, 739 |
| BseGI | GGATG | 5 cut(s) | 352, 386, 525, 1007, 1204 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 343, 578, 834, 1153 |
| BseMII | CTCAG | 1 cut(s) | 233 |
| BseNI | ACTGG | 5 cut(s) | 371, 605, 799, 961, 1147 |
| BseXI | GCAGC | 5 cut(s) | 337, 893, 915, 915, 1130 |
| BshFI | GGCC | 4 cut(s) | 450, 925, 1157, 1269 |
| BshNI | GGYRCC | 1 cut(s) | 856 |
| BsiSI | CCGG | 2 cut(s) | 426, 572 |
| BslFI | GGGAC | 1 cut(s) | 220 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 343, 578, 834, 1153 |
| BsmAI | GTCTC | 2 cut(s) | 981, 1005 |
| BsmFI | GGGAC | 1 cut(s) | 220 |
| BsmI | GAATGC | 1 cut(s) | 1124 |
| BsnI | GGCC | 4 cut(s) | 450, 925, 1157, 1269 |
| Bsp143I | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| BspACI | CCGC | 4 cut(s) | 579, 835, 891, 926 |
| BspANI | GGCC | 4 cut(s) | 450, 925, 1157, 1269 |
| BspCNI | CTCAG | 1 cut(s) | 234 |
| BspLI | GGNNCC | 3 cut(s) | 431, 858, 1268 |
| BspMAI | CTGCAG | 1 cut(s) | 643 |
| BspPI | GGATC | 1 cut(s) | 596 |
| BspT107I | GGYRCC | 1 cut(s) | 856 |
| BsrI | ACTGG | 5 cut(s) | 371, 605, 799, 961, 1147 |
| BssECI | CCNNGG | 3 cut(s) | 248, 515, 739 |
| BssMI | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| BssNAI | GTATAC | 1 cut(s) | 1257 |
| BssNI | GRCGYC | 1 cut(s) | 857 |
| Bst1107I | GTATAC | 1 cut(s) | 1257 |
| Bst2UI | CCWGG | 4 cut(s) | 516, 741, 948, 1271 |
| Bst4CI | ACNGT | 5 cut(s) | 106, 134, 256, 409, 807 |
| Bst6I | CTCTTC | 2 cut(s) | 730, 1245 |
| BstACI | GRCGYC | 1 cut(s) | 857 |
| BstBAI | YACGTR | 1 cut(s) | 40 |
| BstC8I | GCNNGC | 3 cut(s) | 65, 581, 889 |
| BstDEI | CTNAG | 3 cut(s) | 13, 242, 440 |
| BstEII | GGTNACC | 1 cut(s) | 329 |
| BstF5I | GGATG | 5 cut(s) | 352, 386, 525, 1007, 1204 |
| BstH2I | RGCGCY | 1 cut(s) | 860 |
| BstHHI | GCGC | 1 cut(s) | 859 |
| BstKTI | GATC | 4 cut(s) | 604, 628, 758, 1234 |
| BstMAI | GTCTC | 2 cut(s) | 981, 1005 |
| BstMBI | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 53, 900, 1140, 1149 |
| BstNI | CCWGG | 4 cut(s) | 516, 741, 948, 1271 |
| BstNSI | RCATGY | 1 cut(s) | 67 |
| BstPI | GGTNACC | 1 cut(s) | 329 |
| BstSCI | CCNGG | 6 cut(s) | 425, 514, 570, 739, 946, 1269 |
| BstSFI | CTRYAG | 2 cut(s) | 639, 968 |
| BstV1I | GCAGC | 5 cut(s) | 337, 893, 915, 915, 1130 |
| BstX2I | RGATCY | 2 cut(s) | 601, 1231 |
| BstYI | RGATCY | 2 cut(s) | 601, 1231 |
| BstZ17I | GTATAC | 1 cut(s) | 1257 |
| BsuRI | GGCC | 4 cut(s) | 450, 925, 1157, 1269 |
| BtrI | CACGTC | 1 cut(s) | 816 |
| BtsCI | GGATG | 5 cut(s) | 352, 386, 525, 1007, 1204 |
| BtsI | GCAGTG | 3 cut(s) | 451, 471, 980 |
| BtsIMutI | CAGTG | 5 cut(s) | 261, 451, 471, 980, 1154 |
| Cac8I | GCNNGC | 3 cut(s) | 65, 581, 889 |
| CfoI | GCGC | 1 cut(s) | 859 |
| Cfr13I | GGNCC | 3 cut(s) | 616, 1267, 1273 |
| CseI | GACGC | 2 cut(s) | 409, 421 |
| Csp6I | GTAC | 1 cut(s) | 364 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 21, 56 |
| CviAII | CATG | 5 cut(s) | 64, 338, 418, 452, 552 |
| CviQI | GTAC | 1 cut(s) | 364 |
| DdeI | CTNAG | 3 cut(s) | 13, 242, 440 |
| DinI | GGCGCC | 1 cut(s) | 858 |
| DpnI | GATC | 4 cut(s) | 603, 627, 757, 1233 |
| DpnII | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| EaeI | YGGCCR | 1 cut(s) | 448 |
| Eam1104I | CTCTTC | 2 cut(s) | 730, 1245 |
| EarI | CTCTTC | 2 cut(s) | 730, 1245 |
| Eco147I | AGGCCT | 1 cut(s) | 1157 |
| Eco47I | GGWCC | 2 cut(s) | 616, 1273 |
| Eco57I | CTGAAG | 2 cut(s) | 222, 1340 |
| Eco91I | GGTNACC | 1 cut(s) | 329 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1273 |
| EcoO65I | GGTNACC | 1 cut(s) | 329 |
| EcoRI | GAATTC | 2 cut(s) | 744, 979 |
| EcoRII | CCWGG | 4 cut(s) | 514, 739, 946, 1269 |
| EgeI | GGCGCC | 1 cut(s) | 858 |
| EheI | GGCGCC | 1 cut(s) | 858 |
| FaeI | CATG | 5 cut(s) | 67, 341, 421, 455, 555 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1186, 1218 |
| FaqI | GGGAC | 1 cut(s) | 220 |
| FatI | CATG | 5 cut(s) | 63, 337, 417, 451, 551 |
| FauI | CCCGC | 1 cut(s) | 572 |
| FauNDI | CATATG | 3 cut(s) | 112, 227, 1165 |
| FbaI | TGATCA | 1 cut(s) | 625 |
| FblI | GTMKAC | 1 cut(s) | 1256 |
| Fnu4HI | GCNGC | 7 cut(s) | 351, 892, 904, 907, 926, 929, 1144 |
| FokI | GGATG | 5 cut(s) | 359, 373, 532, 1014, 1211 |
| Fsp4HI | GCNGC | 7 cut(s) | 351, 892, 904, 907, 926, 929, 1144 |
| FspBI | CTAG | 1 cut(s) | 300 |
| GlaI | GCGC | 1 cut(s) | 858 |
| GluI | GCNGC | 7 cut(s) | 351, 892, 904, 907, 926, 929, 1144 |
| GsuI | CTGGAG | 3 cut(s) | 816, 1005, 1197 |
| HaeII | RGCGCY | 1 cut(s) | 860 |
| HaeIII | GGCC | 4 cut(s) | 450, 925, 1157, 1269 |
| HapII | CCGG | 2 cut(s) | 426, 572 |
| HgaI | GACGC | 2 cut(s) | 409, 421 |
| HhaI | GCGC | 1 cut(s) | 859 |
| Hin1I | GRCGYC | 1 cut(s) | 857 |
| Hin1II | CATG | 5 cut(s) | 67, 341, 421, 455, 555 |
| Hin6I | GCGC | 1 cut(s) | 857 |
| HinP1I | GCGC | 1 cut(s) | 857 |
| HincII | GTYRAC | 4 cut(s) | 24, 289, 372, 546 |
| HindII | GTYRAC | 4 cut(s) | 24, 289, 372, 546 |
| HindIII | AAGCTT | 2 cut(s) | 535, 1322 |
| HpaI | GTTAAC | 1 cut(s) | 24 |
| HpaII | CCGG | 2 cut(s) | 426, 572 |
| HphI | GGTGA | 3 cut(s) | 189, 227, 793 |
| Hpy166II | GTNNAC | 5 cut(s) | 24, 289, 372, 546, 1257 |
| Hpy188I | TCNGA | 8 cut(s) | 145, 182, 249, 391, 714, 760, 1300, 1320 |
| Hpy188III | TCNNGA | 6 cut(s) | 611, 984, 1051, 1176, 1244, 1328 |
| Hpy8I | GTNNAC | 5 cut(s) | 24, 289, 372, 546, 1257 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyAV | CCTTC | 4 cut(s) | 197, 204, 1057, 1188 |
| HpyCH4III | ACNGT | 5 cut(s) | 106, 134, 256, 409, 807 |
| HpyCH4IV | ACGT | 3 cut(s) | 39, 815, 1098 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 53, 900, 1140, 1149 |
| HpyF3I | CTNAG | 3 cut(s) | 13, 242, 440 |
| HpySE526I | ACGT | 3 cut(s) | 39, 815, 1098 |
| Hsp92I | GRCGYC | 1 cut(s) | 857 |
| Hsp92II | CATG | 5 cut(s) | 67, 341, 421, 455, 555 |
| HspAI | GCGC | 1 cut(s) | 857 |
| KasI | GGCGCC | 1 cut(s) | 856 |
| Ksp22I | TGATCA | 1 cut(s) | 625 |
| KspAI | GTTAAC | 1 cut(s) | 24 |
| Kzo9I | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| Lsp1109I | GCAGC | 5 cut(s) | 337, 893, 915, 915, 1130 |
| LweI | GCATC | 3 cut(s) | 337, 992, 1189 |
| MaeI | CTAG | 1 cut(s) | 300 |
| MaeII | ACGT | 3 cut(s) | 39, 815, 1098 |
| MaeIII | GTNAC | 4 cut(s) | 106, 329, 409, 643 |
| MalI | GATC | 4 cut(s) | 603, 627, 757, 1233 |
| MboI | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| MflI | RGATCY | 2 cut(s) | 601, 1231 |
| MlsI | TGGCCA | 1 cut(s) | 450 |
| MluNI | TGGCCA | 1 cut(s) | 450 |
| Mly113I | GGCGCC | 1 cut(s) | 857 |
| MlyI | GAGTC | 5 cut(s) | 202, 253, 401, 724, 1007 |
| MmeI | TCCRAC | 3 cut(s) | 324, 521, 664 |
| Mox20I | TGGCCA | 1 cut(s) | 450 |
| MscI | TGGCCA | 1 cut(s) | 450 |
| MseI | TTAA | 5 cut(s) | 23, 786, 822, 882, 1136 |
| Msp20I | TGGCCA | 1 cut(s) | 450 |
| MspA1I | CMGCKG | 2 cut(s) | 906, 928 |
| MspI | CCGG | 2 cut(s) | 426, 572 |
| MspR9I | CCNGG | 6 cut(s) | 427, 516, 572, 741, 948, 1271 |
| Mva1269I | GAATGC | 1 cut(s) | 1124 |
| MvaI | CCWGG | 4 cut(s) | 516, 741, 948, 1271 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 53, 900, 1140, 1149 |
| NarI | GGCGCC | 1 cut(s) | 857 |
| NciI | CCSGG | 2 cut(s) | 427, 572 |
| NdeI | CATATG | 3 cut(s) | 112, 227, 1165 |
| NdeII | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| NlaIII | CATG | 5 cut(s) | 67, 341, 421, 455, 555 |
| NlaIV | GGNNCC | 3 cut(s) | 431, 858, 1268 |
| NmuCI | GTSAC | 1 cut(s) | 409 |
| NspI | RCATGY | 1 cut(s) | 67 |
| PaeI | GCATGC | 1 cut(s) | 67 |
| PceI | AGGCCT | 1 cut(s) | 1157 |
| PctI | GAATGC | 1 cut(s) | 1124 |
| PfeI | GAWTC | 6 cut(s) | 58, 140, 183, 422, 585, 1085 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 343 |
| PfoI | TCCNGGA | 1 cut(s) | 425 |
| PkrI | GCNGC | 7 cut(s) | 352, 893, 905, 908, 927, 930, 1145 |
| PleI | GAGTC | 5 cut(s) | 202, 252, 400, 723, 1007 |
| PluTI | GGCGCC | 1 cut(s) | 860 |
| PpsI | GAGTC | 5 cut(s) | 202, 252, 400, 723, 1007 |
| Ppu21I | YACGTR | 1 cut(s) | 40 |
| PpuMI | RGGWCCY | 1 cut(s) | 1273 |
| PshBI | ATTAAT | 2 cut(s) | 786, 822 |
| PsiI | TTATAA | 1 cut(s) | 732 |
| Psp1406I | AACGTT | 1 cut(s) | 1098 |
| Psp5II | RGGWCCY | 1 cut(s) | 1273 |
| Psp6I | CCWGG | 4 cut(s) | 514, 739, 946, 1269 |
| PspEI | GGTNACC | 1 cut(s) | 329 |
| PspGI | CCWGG | 4 cut(s) | 514, 739, 946, 1269 |
| PspN4I | GGNNCC | 3 cut(s) | 431, 858, 1268 |
| PspPI | GGNCC | 3 cut(s) | 616, 1267, 1273 |
| PspPPI | RGGWCCY | 1 cut(s) | 1273 |
| PstI | CTGCAG | 1 cut(s) | 643 |
| PsuI | RGATCY | 2 cut(s) | 601, 1231 |
| PvuII | CAGCTG | 1 cut(s) | 906 |
| RsaI | GTAC | 1 cut(s) | 365 |
| RsaNI | GTAC | 1 cut(s) | 364 |
| SaqAI | TTAA | 5 cut(s) | 23, 786, 822, 882, 1136 |
| SatI | GCNGC | 7 cut(s) | 351, 892, 904, 907, 926, 929, 1144 |
| Sau3AI | GATC | 4 cut(s) | 601, 625, 755, 1231 |
| Sau96I | GGNCC | 3 cut(s) | 616, 1267, 1273 |
| SchI | GAGTC | 5 cut(s) | 202, 253, 401, 724, 1007 |
| ScrFI | CCNGG | 6 cut(s) | 427, 516, 572, 741, 948, 1271 |
| SfaNI | GCATC | 3 cut(s) | 337, 992, 1189 |
| SfcI | CTRYAG | 2 cut(s) | 639, 968 |
| SfoI | GGCGCC | 1 cut(s) | 858 |
| SinI | GGWCC | 2 cut(s) | 616, 1273 |
| SmlI | CTYRAG | 1 cut(s) | 1051 |
| SmoI | CTYRAG | 1 cut(s) | 1051 |
| SpeI | ACTAGT | 1 cut(s) | 299 |
| SphI | GCATGC | 1 cut(s) | 67 |
| SseBI | AGGCCT | 1 cut(s) | 1157 |
| SsiI | CCGC | 4 cut(s) | 579, 835, 891, 926 |
| SspDI | GGCGCC | 1 cut(s) | 856 |
| SspI | AATATT | 2 cut(s) | 472, 790 |
| SspMI | CTAG | 1 cut(s) | 300 |
| StuI | AGGCCT | 1 cut(s) | 1157 |
| StyD4I | CCNGG | 6 cut(s) | 425, 514, 570, 739, 946, 1269 |
| TaaI | ACNGT | 5 cut(s) | 106, 134, 256, 409, 807 |
| TaiI | ACGT | 3 cut(s) | 42, 818, 1101 |
| TaqI | TCGA | 2 cut(s) | 610, 1192 |
| TauI | GCSGC | 2 cut(s) | 894, 928 |
| TfiI | GAWTC | 6 cut(s) | 58, 140, 183, 422, 585, 1085 |
| Tru1I | TTAA | 5 cut(s) | 23, 786, 822, 882, 1136 |
| Tru9I | TTAA | 5 cut(s) | 23, 786, 822, 882, 1136 |
| TscAI | CASTG | 5 cut(s) | 261, 451, 471, 980, 1154 |
| TseFI | GTSAC | 1 cut(s) | 409 |
| TseI | GCWGC | 5 cut(s) | 350, 903, 906, 928, 1143 |
| Tsp45I | GTSAC | 1 cut(s) | 409 |
| TspDTI | ATGAA | 7 cut(s) | 499, 540, 577, 882, 1082, 1152, 1194 |
| TspGWI | ACGGA | 1 cut(s) | 389 |
| TspRI | CASTG | 5 cut(s) | 261, 451, 471, 980, 1154 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 343 |
| VpaK11BI | GGWCC | 2 cut(s) | 616, 1273 |
| VspI | ATTAAT | 2 cut(s) | 786, 822 |
| XapI | RAATTY | 5 cut(s) | 661, 688, 744, 841, 979 |
| XceI | RCATGY | 1 cut(s) | 67 |
| XmiI | GTMKAC | 1 cut(s) | 1256 |
| XspI | CTAG | 1 cut(s) | 300 |