pycom09g02360

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1787441 .. 1788854
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g02360.1

Sequence Viewer

Length: 984 bp
ATGCAAACTATACTAGACGCTACAGATAATTTCTCAAATGCAAACAAGCTTGGACAAGGGGGATACGGGCCTGTTTACAAGGGAATGTTTATTGGAGGCCAAGAAATCGCGGTGAAAAGGCTATCAAGGGTTTCAGGACAAGGCTTGCAGGAATTTAGGAATGAGGTGGTGCTGATTGCCAAACTTCAACACCGAAACCTTGTTAGACTTAAGGGATATTGCATGAAAGGAGAAGAAAAGATCTTACTCTATGAGTACATGCCTAACAAAAGTTTAGACTTCTTTATATTCGATCATACAAAAAGCATGTTTCTCAACTGGGAGATGCGTTTTAGCATCATTTTGGGAATCGCTCGAGGGCTTCTTTATCTTCATCAAGATTCCAGATTGAGGATCATTCATAGAGATTTGAAAACCAGCAATATTCTCCTAGATGAGGAGATGAACCCCAAAATATCTGACTTCGGTTTGGCGAGGATTGTTGGAGGCAAGGAAACTCAGGCAAACACAAACACTGTTGTTGGAACTTATGGTTACATGGCTCCGGAGTATGCATTGGACGGAACTTTCTCAGTGAAATCAGATGTCTTTAGCTTTGGCGTGGTTCTTCTTGAGATAATCAGCGGAAAAAAGAATACAGGCTTTTACCAATCCGAACAAACTTTCAGCCTCATAAATTATGCATGGAGCCTCTTGACAGAAAACAAGGTGCTGGATTTAATGGACAAGACTTTGGACGAAAGTTGCAACAAAAACCAGTTTATCCAGTGTGTCAACGTCGGCCTCTTATGCGTACAAGAAGATCCAAACGATCGGCCCGCCATGTCAAACGTTATCACCCTGCTTGACAGTGATACTGCAACCTCTCCATCTCCTAAACAACCAGGGTTTCTCACAAGGAGAGGCAAATCCAGCACAGCTTCTTCTTCTAGTAAGCCAGAAACTATATCTGAAATAACCACCAGTACAGTAGAAGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

328

Amino Acids

36.57

Weight (kDa)

6.91

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 12 - 278 1.6e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 14 - 280 2.2e-49 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 284 - 327 1.6e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 110
AccIII TCCGGA 1 cut(s) 544
AciI CCGC 3 cut(s) 110, 624, 819
AclI AACGTT 1 cut(s) 831
AclWI GGATC 2 cut(s) 401, 797
AcsI RAATTY 1 cut(s) 152
AfaI GTAC 3 cut(s) 257, 795, 967
AfiI CCNNNNNNNGG 2 cut(s) 390, 436
AflII CTTAAG 1 cut(s) 209
AgsI TTSAA 2 cut(s) 188, 412
AjnI CCWGG 1 cut(s) 883
AluBI AGCT 3 cut(s) 49, 594, 920
AluI AGCT 3 cut(s) 49, 594, 920
AlwI GGATC 2 cut(s) 401, 797
Ama87I CYCGRG 1 cut(s) 354
Aor13HI TCCGGA 1 cut(s) 544
AoxI GGCC 4 cut(s) 68, 97, 781, 815
ApoI RAATTY 1 cut(s) 152
AspS9I GGNCC 2 cut(s) 68, 816
AsuHPI GGTGA 2 cut(s) 124, 829
AvaI CYCGRG 1 cut(s) 354
BccI CCATC 1 cut(s) 877
BciT130I CCWGG 1 cut(s) 885
BciVI GTATCC 1 cut(s) 56
BfaI CTAG 3 cut(s) 14, 431, 930
BfmI CTRYAG 1 cut(s) 21
BfrI CTTAAG 1 cut(s) 209
BfuI GTATCC 1 cut(s) 56
BglII AGATCT 1 cut(s) 240
Bme1390I CCNGG 1 cut(s) 885
BmeT110I CYCGRG 1 cut(s) 354
BmgT120I GGNCC 2 cut(s) 68, 816
BmiI GGNNCC 2 cut(s) 543, 689
BmrFI CCNGG 1 cut(s) 885
BmrI ACTGGG 1 cut(s) 328
BmsI GCATC 2 cut(s) 315, 345
BmuI ACTGGG 1 cut(s) 328
BpuEI CTTGAG 1 cut(s) 632
BsaJI CCNNGG 1 cut(s) 884
BsaWI WCCGGW 1 cut(s) 544
Bsc4I CCNNNNNNNGG 2 cut(s) 390, 436
Bse1I ACTGG 4 cut(s) 323, 757, 766, 963
BseAI TCCGGA 1 cut(s) 544
BseBI CCWGG 1 cut(s) 885
BseDI CCNNGG 1 cut(s) 884
BseLI CCNNNNNNNGG 2 cut(s) 390, 436
BseMII CTCAG 2 cut(s) 512, 585
BseNI ACTGG 4 cut(s) 323, 757, 766, 963
BseRI GAGGAG 1 cut(s) 452
Bsh1236I CGCG 1 cut(s) 110
Bsh1285I CGRYCG 1 cut(s) 814
BshFI GGCC 4 cut(s) 70, 99, 783, 817
BsiEI CGRYCG 1 cut(s) 814
BsiHKCI CYCGRG 1 cut(s) 354
BsiSI CCGG 1 cut(s) 545
BslI CCNNNNNNNGG 2 cut(s) 390, 436
BsnI GGCC 4 cut(s) 70, 99, 783, 817
BsoBI CYCGRG 1 cut(s) 354
Bsp13I TCCGGA 1 cut(s) 544
Bsp143I GATC 5 cut(s) 240, 292, 393, 802, 811
BspACI CCGC 3 cut(s) 110, 624, 819
BspANI GGCC 4 cut(s) 70, 99, 783, 817
BspCNI CTCAG 2 cut(s) 511, 584
BspEI TCCGGA 1 cut(s) 544
BspFNI CGCG 1 cut(s) 110
BspLI GGNNCC 2 cut(s) 543, 689
BspPI GGATC 2 cut(s) 401, 797
BspTI CTTAAG 1 cut(s) 209
BsrI ACTGG 4 cut(s) 323, 757, 766, 963
BssECI CCNNGG 1 cut(s) 884
BssMI GATC 5 cut(s) 240, 292, 393, 802, 811
Bst2UI CCWGG 1 cut(s) 885
Bst4CI ACNGT 3 cut(s) 517, 851, 970
BstAFI CTTAAG 1 cut(s) 209
BstC8I GCNNGC 2 cut(s) 146, 819
BstDEI CTNAG 2 cut(s) 498, 571
BstENI CCTNNNNNAGG 1 cut(s) 434
BstFNI CGCG 1 cut(s) 110
BstKTI GATC 5 cut(s) 243, 295, 396, 805, 814
BstMBI GATC 5 cut(s) 240, 292, 393, 802, 811
BstMCI CGRYCG 1 cut(s) 814
BstMWI GCNNNNNNNGC 2 cut(s) 789, 912
BstNI CCWGG 1 cut(s) 885
BstNSI RCATGY 2 cut(s) 262, 310
BstSCI CCNGG 1 cut(s) 883
BstSFI CTRYAG 1 cut(s) 21
BstUI CGCG 1 cut(s) 110
BstX2I RGATCY 2 cut(s) 240, 802
BstYI RGATCY 2 cut(s) 240, 802
BsuI GTATCC 1 cut(s) 56
BsuRI GGCC 4 cut(s) 70, 99, 783, 817
BtsIMutI CAGTG 4 cut(s) 513, 579, 773, 856
Cac8I GCNNGC 2 cut(s) 146, 819
Cfr13I GGNCC 2 cut(s) 68, 816
CseI GACGC 1 cut(s) 26
Csp6I GTAC 3 cut(s) 256, 794, 966
CviAII CATG 6 cut(s) 223, 259, 307, 538, 684, 823
CviQI GTAC 3 cut(s) 256, 794, 966
DdeI CTNAG 2 cut(s) 498, 571
DpnI GATC 5 cut(s) 242, 294, 395, 804, 813
DpnII GATC 5 cut(s) 240, 292, 393, 802, 811
Eco88I CYCGRG 1 cut(s) 354
EcoNI CCTNNNNNAGG 1 cut(s) 434
EcoRII CCWGG 1 cut(s) 883
EcoT22I ATGCAT 2 cut(s) 556, 685
FaeI CATG 6 cut(s) 226, 262, 310, 541, 687, 826
FatI CATG 6 cut(s) 222, 258, 306, 537, 683, 822
FauI CCCGC 1 cut(s) 826
FspBI CTAG 3 cut(s) 14, 431, 930
HaeIII GGCC 4 cut(s) 70, 99, 783, 817
HapII CCGG 1 cut(s) 545
HgaI GACGC 1 cut(s) 26
Hin1II CATG 6 cut(s) 226, 262, 310, 541, 687, 826
HincII GTYRAC 1 cut(s) 775
HindII GTYRAC 1 cut(s) 775
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 2 cut(s) 348, 380
HpaII CCGG 1 cut(s) 545
HphI GGTGA 2 cut(s) 124, 829
Hpy166II GTNNAC 2 cut(s) 76, 775
Hpy188I TCNGA 4 cut(s) 460, 583, 655, 952
Hpy188III TCNNGA 6 cut(s) 135, 377, 384, 545, 611, 694
Hpy8I GTNNAC 2 cut(s) 76, 775
Hpy99I CGWCG 1 cut(s) 782
HpyAV CCTTC 1 cut(s) 968
HpyCH4III ACNGT 3 cut(s) 517, 851, 970
HpyCH4IV ACGT 2 cut(s) 777, 831
HpyCH4V TGCA 8 cut(s) 4, 41, 148, 222, 554, 683, 747, 860
HpyF10VI GCNNNNNNNGC 2 cut(s) 789, 912
HpyF3I CTNAG 2 cut(s) 498, 571
HpySE526I ACGT 2 cut(s) 777, 831
Hsp92II CATG 6 cut(s) 226, 262, 310, 541, 687, 826
Kpn2I TCCGGA 1 cut(s) 544
Kzo9I GATC 5 cut(s) 240, 292, 393, 802, 811
LmnI GCTCC 2 cut(s) 547, 687
LweI GCATC 2 cut(s) 315, 345
MaeI CTAG 3 cut(s) 14, 431, 930
MaeII ACGT 2 cut(s) 777, 831
MaeIII GTNAC 1 cut(s) 533
MalI GATC 5 cut(s) 242, 294, 395, 804, 813
MboI GATC 5 cut(s) 240, 292, 393, 802, 811
MboII GAAGA 6 cut(s) 245, 362, 599, 812, 915, 918
MflI RGATCY 2 cut(s) 240, 802
MluCI AATT 3 cut(s) 28, 152, 676
MmeI TCCRAC 2 cut(s) 463, 502
Mph1103I ATGCAT 2 cut(s) 556, 685
MroI TCCGGA 1 cut(s) 544
MseI TTAA 2 cut(s) 210, 719
MspA1I CMGCKG 1 cut(s) 624
MspCI CTTAAG 1 cut(s) 209
MspI CCGG 1 cut(s) 545
MspR9I CCNGG 1 cut(s) 885
MvaI CCWGG 1 cut(s) 885
MvnI CGCG 1 cut(s) 110
MwoI GCNNNNNNNGC 2 cut(s) 789, 912
NdeII GATC 5 cut(s) 240, 292, 393, 802, 811
NlaIII CATG 6 cut(s) 226, 262, 310, 541, 687, 826
NlaIV GGNNCC 2 cut(s) 543, 689
NsiI ATGCAT 2 cut(s) 556, 685
NspI RCATGY 2 cut(s) 262, 310
PaeR7I CTCGAG 1 cut(s) 354
PfeI GAWTC 2 cut(s) 348, 380
Ple19I CGATCG 1 cut(s) 814
Psp1406I AACGTT 1 cut(s) 831
Psp6I CCWGG 1 cut(s) 883
PspGI CCWGG 1 cut(s) 883
PspN4I GGNNCC 2 cut(s) 543, 689
PspPI GGNCC 2 cut(s) 68, 816
PspXI VCTCGAGB 1 cut(s) 354
PsuI RGATCY 2 cut(s) 240, 802
PvuI CGATCG 1 cut(s) 814
RsaI GTAC 3 cut(s) 257, 795, 967
RsaNI GTAC 3 cut(s) 256, 794, 966
SaqAI TTAA 2 cut(s) 210, 719
Sau3AI GATC 5 cut(s) 240, 292, 393, 802, 811
Sau96I GGNCC 2 cut(s) 68, 816
ScrFI CCNGG 1 cut(s) 885
SfaNI GCATC 2 cut(s) 315, 345
SfcI CTRYAG 1 cut(s) 21
Sfr274I CTCGAG 1 cut(s) 354
SlaI CTCGAG 1 cut(s) 354
SmlI CTYRAG 3 cut(s) 209, 354, 611
SmoI CTYRAG 3 cut(s) 209, 354, 611
Sse9I AATT 3 cut(s) 28, 152, 676
SsiI CCGC 3 cut(s) 110, 624, 819
SspI AATATT 1 cut(s) 424
SspMI CTAG 3 cut(s) 14, 431, 930
StyD4I CCNGG 1 cut(s) 883
TaaI ACNGT 3 cut(s) 517, 851, 970
TaiI ACGT 2 cut(s) 780, 834
TaqI TCGA 2 cut(s) 291, 355
TasI AATT 3 cut(s) 28, 152, 676
TatI WGTACW 2 cut(s) 255, 965
TfiI GAWTC 2 cut(s) 348, 380
Tru1I TTAA 2 cut(s) 210, 719
Tru9I TTAA 2 cut(s) 210, 719
TscAI CASTG 4 cut(s) 520, 579, 773, 856
TspDTI ATGAA 4 cut(s) 239, 362, 389, 458
TspGWI ACGGA 1 cut(s) 576
TspRI CASTG 4 cut(s) 520, 579, 773, 856
Vha464I CTTAAG 1 cut(s) 209
XagI CCTNNNNNAGG 1 cut(s) 434
XapI RAATTY 1 cut(s) 152
XceI RCATGY 2 cut(s) 262, 310
XhoI CTCGAG 1 cut(s) 354
XspI CTAG 3 cut(s) 14, 431, 930
Zsp2I ATGCAT 2 cut(s) 556, 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.