Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000412

Physical Location & Seq

Genomic Coordinates Reverse (-)

73397009 .. 73405607

Gene Structure 8599 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021251

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGATGCACAAGAGACAATATGTGGGCATGATGACACCTTTTTGAGTTTGAAGATGATGAAAGTGGGTAACCCAGACACAGAGATTGTTGTTTACGATGAAATAGAATGCAAGAACAAGTGCCTCAACAGCTGCCAGTGCCAGGCATACTCATATGCCACACCTGAAAGCATAGCTCAAAGGGATCTTCGTAAAACTTCCTTGTGTAGGGTATGGCTTAAGGACTTAAATAATCTTGTAGAAGAGTATGACAATAGTCATGACATTGCTGCTCGAGTTGCCTTCTCTGATATAGAGACTGCAACTTGTGGCACAACTACAATTCCTTATCCTCTGAGCACTGGATCAGATTGTGGCGACACCATGTACTTAAGTTTCGCGTGCAATGCCTCCATTAATGAATTTAGCTTCCTGGGACCAGATGGCACCTCCTTTAGATGTAGCTCTGACCTGATGAGGAATTTTATTTCCAGCATAAATTCATCCAGCGGTCCTTCAGTAATAGAGATGGGTTGGGAGCCACCATCCGAAGCAAGCGCCACTACCTTAGAAGACTGCAGGGATTGGCCATATTCGACTTGCAATCCAAAAAAATGCCTTTGCAATACAAATTTTCAATGGGACGGCATTGACTTAAATTGTACTCAAGAAGGAAATCTACAAGAGCTATCAAGTAAGAGTTCAAGGAAAAAATTGTTATTGTCTCTGGTTGTCGTGGCAGTCATAAGTGGGATTTTTCTGGCATGCATCATTGGTTTTTGTATATGGAGAAGAAAGATTACTAAGAGACGAGTAAGTCGTCCGCAGCTCGATAGTGAAAGACGAGTCAAGGAGCTCATAGACACGAGTGACTACAATGAAGAAGATGACAAAGGCATAGATGTACCTTTTTTTGATTTGCAAAGCATTCTAGACGCTACAGATAATTTCTCAATTGGAAACAAGCTTGGACAGGGGGGGGGGGGGGGGGGGTATGGGCCTGTTTACAAGGCAGGAGGTCAAGAAATTGCTGTAAAGAGGCTGTCAAGAGTTTCAGGACAAGTCTTGCAGGAATTTAAGAATGAGGTGGTGCCAAACGCCAAACTTCAACATCGTAATCTTGTTAGACTCAGAGGATATTGCATGAAAGGAGAAGAAAAGATTTTACTTTATGAGTACATGCGCAACAAAAGCTTAGATTCCTTTATATTTGATCATACACAAAGCGTGTTTCTCAATTGGGAGATGCGGTTTAACATCATTTTAGGAATTGCTCGAGGACTTCTTTATCTTCATCAGGATTCCAGGTTGAGGATCATTCATAGAGATTTGAAAAACAGCAACTTTCTTTTGGATGAGGAGATGAACCCCAAAATATCTGACTTCGGCTTGGCCAGGATTGTTGGAGGCAAAGAAACAGAGGCAAACACAAATACAGTACGTACCAGGAACCTAGTAAGTACATACTTCGATGTGAATGGTTCTAGCTACATGTCTCCAGAATATGCATTAGAGGGAACCTTCGCTGTCAAATCAGATGTCTATAGTTTTGGTGTGGTTCTTCTTGAGATAATAAGTGGAATAAAGAATGCAGGATTTTTATCAGCATGGGAACTCTGGACAGAAGACAAGGTATTGGATTTAATGGACAAGAATTTGGAAGGAAGTTGTGACAGAAGTGAATTTATAAAGTGTGTAAATGTTGGGCTCTTACGCGTACAAGAAGATCCGGTTGATCTCCCTACAATGTCAAATGTTATTACCCTGCTTGACAGTGAAACTGCAATCCCTGCAACTCCTATACAAGCAGCCTTTTTCATGAGAGGCAACTCTAGCACAGCTGCTTCTTCTTCTAAGCCAGAAACAAATTCTGAAATAACTACACTGGAAGGTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin GUB_WAK_bind PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

626

Amino Acids

69.76

Weight (kDa)

5.0

Isoelectric Point (pI)

46.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PAN_2	PF08276	8 - 78	1.1e-11	PAN-like domain
Pkinase	PF00069	311 - 520	2.5e-34	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	313 - 522	6.1e-35	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca	FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica	MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica	Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis	pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis	RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata	RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora	Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii	Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa	Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha	Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana	Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1667
AasI	GACNNNNNNGTC	1 cut(s)	795
Acc16I	TGCGCA	1 cut(s)	1163
AccB1I	GGYRCC	2 cut(s)	425, 1069
AccII	CGCG	2 cut(s)	380, 1695
AciI	CCGC	3 cut(s)	489, 803, 1228
AclWI	GGATC	4 cut(s)	192, 352, 1301, 1700
AcoI	YGGCCR	2 cut(s)	566, 1371
AcsI	RAATTY	8 cut(s)	401, 460, 478, 610, 1052, 1633, 1661, 1846
AcuI	CTGAAG	1 cut(s)	480
AfaI	GTAC	8 cut(s)	368, 643, 885, 1157, 1419, 1423, 1441, 1698
AfiI	CCNNNNNNNGG	3 cut(s)	142, 207, 1290
AflII	CTTAAG	2 cut(s)	218, 370
AflIII	ACRYGT	2 cut(s)	1470, 1693
AgsI	TTSAA	5 cut(s)	52, 617, 684, 1088, 1312
AjnI	CCWGG	5 cut(s)	141, 411, 1283, 1373, 1424
Alw21I	GWGCWC	2 cut(s)	341, 837
Alw26I	GTCTC	5 cut(s)	8, 290, 708, 781, 1479
AlwI	GGATC	4 cut(s)	192, 352, 1301, 1700
Ama87I	CYCGRG	2 cut(s)	273, 1254
AoxI	GGCC	3 cut(s)	566, 977, 1371
ApeKI	GCWGC	5 cut(s)	132, 269, 805, 1787, 1820
ApoI	RAATTY	8 cut(s)	401, 460, 478, 610, 1052, 1633, 1661, 1846
ArsI	GACNNNNNNTTYG	2 cut(s)	1503, 1535
AseI	ATTAAT	1 cut(s)	396
AspLEI	GCGC	2 cut(s)	539, 1164
AspS9I	GGNCC	3 cut(s)	416, 491, 977
AvaI	CYCGRG	2 cut(s)	273, 1254
AvaII	GGWCC	2 cut(s)	416, 491
BalI	TGGCCA	2 cut(s)	568, 1373
BanI	GGYRCC	2 cut(s)	425, 1069
BanII	GRGCYC	2 cut(s)	837, 1689
BarI	GAAGNNNNNNTAC	4 cut(s)	642, 674, 763, 795
BauI	CACGAG	1 cut(s)	844
BbsI	GAAGAC	2 cut(s)	558, 1611
Bbv12I	GWGCWC	2 cut(s)	341, 837
BbvI	GCAGC	5 cut(s)	119, 256, 817, 1799, 1807
BccI	CCATC	3 cut(s)	416, 502, 532
BceAI	ACGGC	1 cut(s)	640
BciT130I	CCWGG	5 cut(s)	143, 413, 1285, 1375, 1426
BclI	TGATCA	1 cut(s)	1192
BcoDI	GTCTC	5 cut(s)	8, 290, 708, 781, 1479
BfaI	CTAG	4 cut(s)	911, 1433, 1464, 1812
BfmI	CTRYAG	3 cut(s)	556, 918, 1522
BfoI	RGCGCY	1 cut(s)	540
BfrI	CTTAAG	2 cut(s)	218, 370
BisI	GCNGC	5 cut(s)	133, 270, 806, 1788, 1821
BlsI	GCNGC	5 cut(s)	134, 271, 807, 1789, 1822
Bme1390I	CCNGG	5 cut(s)	143, 413, 1285, 1375, 1426
Bme18I	GGWCC	2 cut(s)	416, 491
BmeT110I	CYCGRG	2 cut(s)	273, 1254
BmgT120I	GGNCC	3 cut(s)	416, 491, 977
BmiI	GGNNCC	6 cut(s)	417, 427, 519, 1071, 1430, 1498
BmrFI	CCNGG	5 cut(s)	143, 413, 1285, 1375, 1426
BmsI	GCATC	2 cut(s)	756, 1215
BoxI	GACNNNNGTC	1 cut(s)	255
BpiI	GAAGAC	2 cut(s)	558, 1611
BpmI	CTGGAG	1 cut(s)	1461
BpuEI	CTTGAG	2 cut(s)	630, 1565
BsaAI	YACGTR	1 cut(s)	1421
BsaBI	GATNNNNATC	1 cut(s)	1579
BsaJI	CCNNGG	1 cut(s)	412
BsaWI	WCCGGW	1 cut(s)	1708
BsaXI	ACNNNNNCTCC	2 cut(s)	1214, 1244
Bsc4I	CCNNNNNNNGG	3 cut(s)	142, 207, 1290
Bse1I	ACTGG	3 cut(s)	136, 346, 1869
Bse3DI	GCAATG	2 cut(s)	264, 391
Bse8I	GATNNNNATC	1 cut(s)	1579
BseBI	CCWGG	5 cut(s)	143, 413, 1285, 1375, 1426
BseDI	CCNNGG	1 cut(s)	412
BseGI	GGATG	4 cut(s)	10, 482, 524, 1339
BseJI	GATNNNNATC	1 cut(s)	1579
BseLI	CCNNNNNNNGG	3 cut(s)	142, 207, 1290
BseMI	GCAATG	2 cut(s)	264, 391
BseMII	CTCAG	2 cut(s)	326, 1123
BseNI	ACTGG	3 cut(s)	136, 346, 1869
BseRI	GAGGAG	1 cut(s)	1352
BseXI	GCAGC	5 cut(s)	119, 256, 817, 1799, 1807
Bsh1236I	CGCG	2 cut(s)	380, 1695
BshFI	GGCC	3 cut(s)	568, 979, 1373
BshNI	GGYRCC	2 cut(s)	425, 1069
BsiHKAI	GWGCWC	2 cut(s)	341, 837
BsiHKCI	CYCGRG	2 cut(s)	273, 1254
BsiSI	CCGG	1 cut(s)	1709
BslFI	GGGAC	2 cut(s)	429, 635
BslI	CCNNNNNNNGG	3 cut(s)	142, 207, 1290
BsmAI	GTCTC	5 cut(s)	8, 290, 708, 781, 1479
BsmBI	CGTCTC	1 cut(s)	781
BsmFI	GGGAC	2 cut(s)	429, 635
BsmI	GAATGC	3 cut(s)	113, 906, 1573
BsnI	GGCC	3 cut(s)	568, 979, 1373
BsoBI	CYCGRG	2 cut(s)	273, 1254
Bsp1286I	GDGCHC	3 cut(s)	341, 837, 1689
Bsp143I	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
BspACI	CCGC	3 cut(s)	489, 803, 1228
BspANI	GGCC	3 cut(s)	568, 979, 1373
BspCNI	CTCAG	2 cut(s)	327, 1122
BspFNI	CGCG	2 cut(s)	380, 1695
BspHI	TCATGA	2 cut(s)	259, 1797
BspLI	GGNNCC	6 cut(s)	417, 427, 519, 1071, 1430, 1498
BspMAI	CTGCAG	1 cut(s)	560
BspPI	GGATC	4 cut(s)	192, 352, 1301, 1700
BspT107I	GGYRCC	2 cut(s)	425, 1069
BspTI	CTTAAG	2 cut(s)	218, 370
BsrDI	GCAATG	2 cut(s)	264, 391
BsrI	ACTGG	3 cut(s)	136, 346, 1869
BssECI	CCNNGG	1 cut(s)	412
BssMI	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
BssSI	CACGAG	1 cut(s)	844
Bst2BI	CACGAG	1 cut(s)	844
Bst2UI	CCWGG	5 cut(s)	143, 413, 1285, 1375, 1426
Bst4CI	ACNGT	2 cut(s)	1417, 1754
Bst6I	CTCTTC	1 cut(s)	237
BstAFI	CTTAAG	2 cut(s)	218, 370
BstAPI	GCANNNNNTGC	1 cut(s)	1769
BstBAI	YACGTR	1 cut(s)	1421
BstC8I	GCNNGC	3 cut(s)	382, 535, 745
BstDEI	CTNAG	6 cut(s)	335, 547, 783, 1109, 1174, 1833
BstEII	GGTNACC	1 cut(s)	68
BstENI	CCTNNNNNAGG	1 cut(s)	205
BstF5I	GGATG	4 cut(s)	10, 482, 524, 1339
BstFNI	CGCG	2 cut(s)	380, 1695
BstH2I	RGCGCY	1 cut(s)	540
BstHHI	GCGC	2 cut(s)	539, 1164
BstKTI	GATC	6 cut(s)	187, 347, 1195, 1296, 1708, 1717
BstMAI	GTCTC	5 cut(s)	8, 290, 708, 781, 1479
BstMBI	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 138, 278, 386, 1170, 1769, 1812
BstNI	CCWGG	5 cut(s)	143, 413, 1285, 1375, 1426
BstNSI	RCATGY	3 cut(s)	747, 1162, 1474
BstPAI	GACNNNNGTC	1 cut(s)	255
BstPI	GGTNACC	1 cut(s)	68
BstSCI	CCNGG	5 cut(s)	141, 411, 1283, 1373, 1424
BstSFI	CTRYAG	3 cut(s)	556, 918, 1522
BstSNI	TACGTA	1 cut(s)	1421
BstUI	CGCG	2 cut(s)	380, 1695
BstV1I	GCAGC	5 cut(s)	119, 256, 817, 1799, 1807
BstV2I	GAAGAC	2 cut(s)	558, 1611
BstX2I	RGATCY	2 cut(s)	184, 1705
BstYI	RGATCY	2 cut(s)	184, 1705
BsuRI	GGCC	3 cut(s)	568, 979, 1373
BtsCI	GGATG	4 cut(s)	10, 482, 524, 1339
BtsIMutI	CAGTG	4 cut(s)	143, 339, 1759, 1862
Cac8I	GCNNGC	3 cut(s)	382, 535, 745
CciI	TCATGA	2 cut(s)	259, 1797
CfoI	GCGC	2 cut(s)	539, 1164
Cfr13I	GGNCC	3 cut(s)	416, 491, 977
CseI	GACGC	1 cut(s)	923
Csp6I	GTAC	8 cut(s)	367, 642, 884, 1156, 1418, 1422, 1440, 1697
CviAII	CATG	9 cut(s)	29, 260, 364, 744, 1123, 1159, 1471, 1587, 1798
CviQI	GTAC	8 cut(s)	367, 642, 884, 1156, 1418, 1422, 1440, 1697
DdeI	CTNAG	6 cut(s)	335, 547, 783, 1109, 1174, 1833
DpnI	GATC	6 cut(s)	186, 346, 1194, 1295, 1707, 1716
DpnII	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
DrdI	GACNNNNNNGTC	1 cut(s)	795
DseDI	GACNNNNNNGTC	1 cut(s)	795
EaeI	YGGCCR	2 cut(s)	566, 1371
Eam1104I	CTCTTC	1 cut(s)	237
EarI	CTCTTC	1 cut(s)	237
Ecl136II	GAGCTC	1 cut(s)	835
Eco105I	TACGTA	1 cut(s)	1421
Eco24I	GRGCYC	2 cut(s)	837, 1689
Eco47I	GGWCC	2 cut(s)	416, 491
Eco53kI	GAGCTC	1 cut(s)	835
Eco57I	CTGAAG	1 cut(s)	480
Eco88I	CYCGRG	2 cut(s)	273, 1254
Eco91I	GGTNACC	1 cut(s)	68
EcoICRI	GAGCTC	1 cut(s)	835
EcoNI	CCTNNNNNAGG	1 cut(s)	205
EcoO65I	GGTNACC	1 cut(s)	68
EcoRII	CCWGG	5 cut(s)	141, 411, 1283, 1373, 1424
EcoT22I	ATGCAT	2 cut(s)	749, 1489
EcoT38I	GRGCYC	2 cut(s)	837, 1689
Esp3I	CGTCTC	1 cut(s)	781
FaeI	CATG	9 cut(s)	32, 263, 367, 747, 1126, 1162, 1474, 1590, 1801
FaqI	GGGAC	2 cut(s)	429, 635
FatI	CATG	9 cut(s)	28, 259, 363, 743, 1122, 1158, 1470, 1586, 1797
FauNDI	CATATG	1 cut(s)	154
FbaI	TGATCA	1 cut(s)	1192
Fnu4HI	GCNGC	5 cut(s)	133, 270, 806, 1788, 1821
FokI	GGATG	4 cut(s)	17, 469, 511, 1346
FriOI	GRGCYC	2 cut(s)	837, 1689
Fsp4HI	GCNGC	5 cut(s)	133, 270, 806, 1788, 1821
FspBI	CTAG	4 cut(s)	911, 1433, 1464, 1812
FspI	TGCGCA	1 cut(s)	1163
GlaI	GCGC	2 cut(s)	538, 1163
GluI	GCNGC	5 cut(s)	133, 270, 806, 1788, 1821
GsuI	CTGGAG	1 cut(s)	1461
HaeII	RGCGCY	1 cut(s)	540
HaeIII	GGCC	3 cut(s)	568, 979, 1373
HapII	CCGG	1 cut(s)	1709
HgaI	GACGC	1 cut(s)	923
HhaI	GCGC	2 cut(s)	539, 1164
Hin1II	CATG	9 cut(s)	32, 263, 367, 747, 1126, 1162, 1474, 1590, 1801
Hin6I	GCGC	2 cut(s)	537, 1162
HinP1I	GCGC	2 cut(s)	537, 1162
HindIII	AAGCTT	2 cut(s)	944, 1171
HinfI	GANTC	4 cut(s)	825, 1107, 1178, 1280
HpaII	CCGG	1 cut(s)	1709
Hpy166II	GTNNAC	2 cut(s)	94, 985
Hpy188I	TCNGA	9 cut(s)	289, 336, 349, 448, 529, 1112, 1360, 1516, 1852
Hpy8I	GTNNAC	2 cut(s)	94, 985
HpyAV	CCTTC	6 cut(s)	292, 504, 644, 1510, 1634, 1862
HpyCH4III	ACNGT	2 cut(s)	1417, 1754
HpyCH4IV	ACGT	1 cut(s)	1420
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 138, 278, 386, 1170, 1769, 1812
HpyF3I	CTNAG	6 cut(s)	335, 547, 783, 1109, 1174, 1833
HpySE526I	ACGT	1 cut(s)	1420
Hsp92II	CATG	9 cut(s)	32, 263, 367, 747, 1126, 1162, 1474, 1590, 1801
HspAI	GCGC	2 cut(s)	537, 1162
Ksp22I	TGATCA	1 cut(s)	1192
Kzo9I	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
LmnI	GCTCC	2 cut(s)	517, 832
Lsp1109I	GCAGC	5 cut(s)	119, 256, 817, 1799, 1807
LweI	GCATC	2 cut(s)	756, 1215
MaeI	CTAG	4 cut(s)	911, 1433, 1464, 1812
MaeII	ACGT	1 cut(s)	1420
MaeIII	GTNAC	3 cut(s)	68, 848, 1649
MalI	GATC	6 cut(s)	186, 346, 1194, 1295, 1707, 1716
MboI	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
MfeI	CAATTG	2 cut(s)	933, 1216
MflI	RGATCY	2 cut(s)	184, 1705
MhlI	GDGCHC	3 cut(s)	341, 837, 1689
MlsI	TGGCCA	2 cut(s)	568, 1373
MluI	ACGCGT	1 cut(s)	1693
MluNI	TGGCCA	2 cut(s)	568, 1373
MlyI	GAGTC	2 cut(s)	834, 1101
MmeI	TCCRAC	1 cut(s)	1363
Mox20I	TGGCCA	2 cut(s)	568, 1373
Mph1103I	ATGCAT	2 cut(s)	749, 1489
MscI	TGGCCA	2 cut(s)	568, 1373
MseI	TTAA	8 cut(s)	219, 227, 371, 396, 635, 1056, 1233, 1622
Msp20I	TGGCCA	2 cut(s)	568, 1373
MspA1I	CMGCKG	3 cut(s)	132, 489, 1820
MspCI	CTTAAG	2 cut(s)	218, 370
MspI	CCGG	1 cut(s)	1709
MspR9I	CCNGG	5 cut(s)	143, 413, 1285, 1375, 1426
MunI	CAATTG	2 cut(s)	933, 1216
Mva1269I	GAATGC	3 cut(s)	113, 906, 1573
MvaI	CCWGG	5 cut(s)	143, 413, 1285, 1375, 1426
MvnI	CGCG	2 cut(s)	380, 1695
MwoI	GCNNNNNNNGC	7 cut(s)	129, 138, 278, 386, 1170, 1769, 1812
NdeI	CATATG	1 cut(s)	154
NdeII	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
NlaIII	CATG	9 cut(s)	32, 263, 367, 747, 1126, 1162, 1474, 1590, 1801
NlaIV	GGNNCC	6 cut(s)	417, 427, 519, 1071, 1430, 1498
NmuCI	GTSAC	2 cut(s)	848, 1649
NsbI	TGCGCA	1 cut(s)	1163
NsiI	ATGCAT	2 cut(s)	749, 1489
NspI	RCATGY	3 cut(s)	747, 1162, 1474
PaeI	GCATGC	1 cut(s)	747
PaeR7I	CTCGAG	2 cut(s)	273, 1254
PagI	TCATGA	2 cut(s)	259, 1797
PciI	ACATGT	1 cut(s)	1470
PcsI	WCGNNNNNNNCGW	1 cut(s)	796
PctI	GAATGC	3 cut(s)	113, 906, 1573
PfeI	GAWTC	2 cut(s)	1178, 1280
PkrI	GCNGC	5 cut(s)	134, 271, 807, 1789, 1822
PleI	GAGTC	2 cut(s)	833, 1101
PpsI	GAGTC	2 cut(s)	833, 1101
Ppu21I	YACGTR	1 cut(s)	1421
PscI	ACATGT	1 cut(s)	1470
PshAI	GACNNNNGTC	1 cut(s)	255
PshBI	ATTAAT	1 cut(s)	396
PsiI	TTATAA	1 cut(s)	1667
Psp124BI	GAGCTC	1 cut(s)	837
Psp6I	CCWGG	5 cut(s)	141, 411, 1283, 1373, 1424
PspEI	GGTNACC	1 cut(s)	68
PspGI	CCWGG	5 cut(s)	141, 411, 1283, 1373, 1424
PspN4I	GGNNCC	6 cut(s)	417, 427, 519, 1071, 1430, 1498
PspPI	GGNCC	3 cut(s)	416, 491, 977
PspXI	VCTCGAGB	2 cut(s)	273, 1254
PstI	CTGCAG	1 cut(s)	560
PsuI	RGATCY	2 cut(s)	184, 1705
PvuII	CAGCTG	2 cut(s)	132, 1820
RsaI	GTAC	8 cut(s)	368, 643, 885, 1157, 1419, 1423, 1441, 1698
RsaNI	GTAC	8 cut(s)	367, 642, 884, 1156, 1418, 1422, 1440, 1697
SacI	GAGCTC	1 cut(s)	837
SaqAI	TTAA	8 cut(s)	219, 227, 371, 396, 635, 1056, 1233, 1622
SatI	GCNGC	5 cut(s)	133, 270, 806, 1788, 1821
Sau3AI	GATC	6 cut(s)	184, 344, 1192, 1293, 1705, 1714
Sau96I	GGNCC	3 cut(s)	416, 491, 977
SchI	GAGTC	2 cut(s)	834, 1101
ScrFI	CCNGG	5 cut(s)	143, 413, 1285, 1375, 1426
SduI	GDGCHC	3 cut(s)	341, 837, 1689
SfaNI	GCATC	2 cut(s)	756, 1215
SfcI	CTRYAG	3 cut(s)	556, 918, 1522
Sfr274I	CTCGAG	2 cut(s)	273, 1254
SinI	GGWCC	2 cut(s)	416, 491
SlaI	CTCGAG	2 cut(s)	273, 1254
SmlI	CTYRAG	6 cut(s)	218, 273, 370, 645, 1254, 1544
SmoI	CTYRAG	6 cut(s)	218, 273, 370, 645, 1254, 1544
SnaBI	TACGTA	1 cut(s)	1421
SphI	GCATGC	1 cut(s)	747
SsiI	CCGC	3 cut(s)	489, 803, 1228
SspMI	CTAG	4 cut(s)	911, 1433, 1464, 1812
SstI	GAGCTC	1 cut(s)	837
StyD4I	CCNGG	5 cut(s)	141, 411, 1283, 1373, 1424
TaaI	ACNGT	2 cut(s)	1417, 1754
TaiI	ACGT	1 cut(s)	1423
TaqI	TCGA	5 cut(s)	274, 575, 810, 1255, 1449
TatI	WGTACW	4 cut(s)	366, 641, 1155, 1439
TfiI	GAWTC	2 cut(s)	1178, 1280
Tru1I	TTAA	8 cut(s)	219, 227, 371, 396, 635, 1056, 1233, 1622
Tru9I	TTAA	8 cut(s)	219, 227, 371, 396, 635, 1056, 1233, 1622
TscAI	CASTG	4 cut(s)	143, 346, 1759, 1869
TseFI	GTSAC	2 cut(s)	848, 1649
TseI	GCWGC	5 cut(s)	132, 269, 805, 1787, 1820
Tsp45I	GTSAC	2 cut(s)	848, 1649
TspRI	CASTG	4 cut(s)	143, 346, 1759, 1869
Vha464I	CTTAAG	2 cut(s)	218, 370
VpaK11BI	GGWCC	2 cut(s)	416, 491
VspI	ATTAAT	1 cut(s)	396
XagI	CCTNNNNNAGG	1 cut(s)	205
XapI	RAATTY	8 cut(s)	401, 460, 478, 610, 1052, 1633, 1661, 1846
XbaI	TCTAGA	1 cut(s)	910
XceI	RCATGY	3 cut(s)	747, 1162, 1474
XhoI	CTCGAG	2 cut(s)	273, 1254
XspI	CTAG	4 cut(s)	911, 1433, 1464, 1812
Zsp2I	ATGCAT	2 cut(s)	749, 1489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.