Rmu_sc0000955.1_g000025

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000955.1
OG0000412
Physical Location & Seq
Reverse (-)
102454 .. 109161
6708 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000955.1_g000025.1.cds

Sequence Viewer

Length: 3216 bp
atggatgtgcacaggaacgggaaaaagatgcagtgggtgtgcgttggcttgtttgcgcagcagggatgcttcggtggcagcaggctggaacgcagggctgcaggaaggggggcagcaggggctgctgtgcaaggttgcaagcacacgggttgcgatgtggtagggctagctcgggctaggtggcttcggcagattttggtttttgctttgtggctagagtcagatacactgacaccggccgatccagttactgatgacgaatcaggaactcttgtttcagcaggaggaaaatttgaattgggtttctttacccctactcctacaaggaaaagtaacttgggcgctgatagcaaatttgttggcatatggtaccatgaggtcagtccaaaaacagttgtatgggttgccaacagagaagatccactgcctgccaattccactgggcttctcacaatcgaagatggtaacctctgcgtgttggataaagttactggaaagtcttattggtccacaaacatcggaacatcttcgtcttctaacatgattgtgaaaataatggagtctgggaacctggtgttaatggattctgatcagatggcagcaaatattctgtgggagagctttcagaatcccactgatacattcattcctgggatgctaatggataaagacttccagttgacttcttggagggacgaagatgacccaagaccgggaaacttcacattcaaactcgatcagagtgagagacagtatatcataatgaagaagtcgtttccgtactggaaaagtggagagccaggtaatcatttcagctcagatgaaatgcgtcctgaaggagcttacttgctatcaaatttcagccccagaagtcggtcatctcgttataatgttcaaattcctttggattacaactatacacggttggtgataaattttactggagagttacggttttggacttggaacaagaagcagtggcttctctcgtggtcggagccaaaagatcagtgtagggagtttaacccttgtggaaattttggcagctgcaataataataattggcctttggtatgcaaatgtttgcccggtttcaagcccaaggacccatataattggaattctggagatttttcaggtggatgtgatagagagtcatcaatctcttacaacagcagcaggttcttgagcttaaagatgatgaaagttggagaggcagagtcaccgttcgatgtggccaatgaaacagagtgcaggaacgcgtgcctagataaaaccctgtgccaggcttactcgtatgatgttctagctgaagacacagctcgaaggggtactgctactacctcctcgtgctggacgtggttggaagatctaaataatcttgtagaagagtatggcggtggccacaatatctttgttcgagttgcctcgtctgatatagaatctactgtaagagactgcgagccttgtggcacaacgacaataccttatcccctgagcaccggactggactgtggagaccccatgtacttccgtttcaactgcaacacttcgacaggccaggttagctacatgggactgaaggacacctttcgagttataagcatcagaccaagtacgcaaaaatttgtactccaagggttgccagccgaaaaggtcgatcattgtgattctagaaacagagccaaaactctgcagcttaacccatcattcccatttaagataagtagttggtgcaatgctgaccttggaaactttagttctgaagtattctcttctcgagtccttaatgtagtagagttgggttgggagctaccgctagaaccagcctgcaatacatcagtagactgcaagggttggccaaattcaacctgcaatccagcaagaaatggaatgaaaagatgcctttgcaacaagagttttcaatggaatgcctttaacttcaattgtactcaagaaggtagtcctcatgagccatcaaactctccatcgcaatcgtccttaggagagcattcaatcagaaaagtttcattctatctgataattgtggcggtgcttataagcatgattttactggcatgcatcatttctatttatatatggagaagaaaaatgaccagaaaacaagatcaaataagtcgtgcacaatttgatagtgaaagacgagtcaaggagttgatagacacaagtgagttcaacgaagaagatgagaaaggtctagatgtacccttttttgatttgcaaagcatactcgaagctacagataatttctcagatgctaacaagctaggacaagggggatatgggcctgtttacaaggggaagttttttggaggtcaagaaattgcagtaaagaggctatcaaaggtttcaggacaagggttacaggaatttaggaatgaggtcgtgctgattgccaaacttcagcaccgaaatcttgttagactcagaggatattgcatgaaaggagaagaaaagattttactttatgagtacatgcccaacaaaagcttggattcctttatatttgatcatacacaagacgtatttctcaattgggagatgcggtttaacatcattttgggaatcgctcgaggacttctttatcttcatcaagattcgaggttgaggattattcatagagatttgaaaaccagcaacgtacttttggatgaggagatgaaccccaaaatatccgacttcggcttggccaggattgttggaggcaaagaaacagaggcaaacacaaatacagtagtaggaacctatggctacatgtctccggaatatgcattagatggaactttctcagtcaaatcagatgtctttagttttggtgtggttcttcttgagataatcagtggaaaaaagaatgcaggattttttcagtccaaacaaactttcagcctgcttggttatgcatgggaactctggacagtagacaaggtgttggatttaatggacaagaatttggaagaaagttgtaacagaagtgaatttataaagtgtgtaaatgttgggctcttatgcgttcaagaagatccggttgatcgccctacaatgtcacatgttataaccttgcttgacagtgaaactgcaatccctgcaactcctaaacaaccagcctttttcataaggagaggcaactctagcacagcttcctcttctactaagccagaaacaatttgtgaaataaatactctggaaggcagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

1071

Amino Acids

120.48

Weight (kDa)

5.84

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 888, 1601, 2060, 3002, 3074
Acc16I TGCGCA 1 cut(s) 57
Acc36I ACCTGC 2 cut(s) 1170, 1880
Acc65I GGTACC 1 cut(s) 369
AccB1I GGYRCC 1 cut(s) 369
AccI GTMKAC 2 cut(s) 1845, 2940
AccII CGCG 1 cut(s) 1262
AccIII TCCGGA 1 cut(s) 2782
AciI CCGC 4 cut(s) 1398, 1817, 2051, 2566
AclWI GGATC 3 cut(s) 236, 413, 3035
AcoI YGGCCR 5 cut(s) 237, 1236, 1402, 1859, 2709
AcuI CTGAAG 5 cut(s) 855, 1332, 1601, 1785, 2408
AfiI CCNNNNNNNGG 5 cut(s) 712, 713, 873, 1285, 1353
AflIII ACRYGT 3 cut(s) 1260, 2775, 3067
AjiI CACGTC 1 cut(s) 1359
AjnI CCWGG 6 cut(s) 570, 649, 799, 1284, 1560, 2711
AjuI GAANNNNNNNTTGG 6 cut(s) 320, 352, 487, 519, 2885, 2917
Alw21I GWGCWC 3 cut(s) 12, 1502, 2146
Alw26I GTCTC 4 cut(s) 742, 1449, 1512, 2784
Alw44I GTGCAC 2 cut(s) 8, 2142
AlwI GGATC 3 cut(s) 236, 413, 3035
AlwNI CAGNNNCTG 2 cut(s) 122, 251
Ama87I CYCGRG 3 cut(s) 171, 1779, 2592
Aor13HI TCCGGA 1 cut(s) 2782
AoxI GGCC 8 cut(s) 237, 1064, 1236, 1402, 1558, 1859, 2306, 2709
ApaLI GTGCAC 2 cut(s) 8, 2142
ArsI GACNNNNNNTTYG 2 cut(s) 2808, 2840
Asp700I GAANNNNTTC 2 cut(s) 526, 2026
Asp718I GGTACC 1 cut(s) 369
AspLEI GCGC 2 cut(s) 58, 344
AspS9I GGNCC 3 cut(s) 507, 1105, 2306
AsuC2I CCSGG 2 cut(s) 714, 1089
AsuHPI GGTGA 2 cut(s) 940, 1215
AsuNHI GCTAGC 1 cut(s) 166
AvaI CYCGRG 3 cut(s) 171, 1779, 2592
AvaII GGWCC 2 cut(s) 507, 1105
AxyI CCTNAGG 1 cut(s) 2002
BaeGI GKGCMC 2 cut(s) 12, 2146
BalI TGGCCA 4 cut(s) 1238, 1404, 1861, 2711
BanI GGYRCC 1 cut(s) 369
BanII GRGCYC 1 cut(s) 3024
BauI CACGAG 2 cut(s) 988, 1348
BbsI GAAGAC 2 cut(s) 525, 1320
Bbv12I GWGCWC 3 cut(s) 12, 1502, 2146
BccI CCATC 6 cut(s) 455, 589, 1714, 1984, 1996, 2792
BciT130I CCWGG 6 cut(s) 572, 651, 801, 1286, 1562, 2713
BclI TGATCA 2 cut(s) 589, 2530
BcnI CCSGG 2 cut(s) 714, 1089
BcoDI GTCTC 4 cut(s) 742, 1449, 1512, 2784
BfmI CTRYAG 3 cut(s) 99, 1694, 2259
BfoI RGCGCY 1 cut(s) 345
BfuAI ACCTGC 2 cut(s) 1170, 1880
BglII AGATCT 1 cut(s) 1369
Bme1390I CCNGG 8 cut(s) 572, 651, 714, 801, 1089, 1286, 1562, 2713
Bme18I GGWCC 2 cut(s) 507, 1105
BmeT110I CYCGRG 3 cut(s) 171, 1779, 2592
BmgBI CACGTC 1 cut(s) 1359
BmgT120I GGNCC 3 cut(s) 507, 1105, 2306
BmiI GGNNCC 5 cut(s) 371, 569, 999, 1107, 2764
BmrFI CCNGG 8 cut(s) 572, 651, 714, 801, 1089, 1286, 1562, 2713
BmrI ACTGGG 1 cut(s) 450
BmsI GCATC 8 cut(s) 18, 56, 645, 1614, 1892, 2091, 2266, 2553
BmtI GCTAGC 1 cut(s) 170
BmuI ACTGGG 1 cut(s) 450
BpiI GAAGAC 2 cut(s) 525, 1320
BpmI CTGGAG 2 cut(s) 963, 1146
Bpu10I CCTNAGC 1 cut(s) 1496
BpuEI CTTGAG 3 cut(s) 1207, 1938, 2870
BpuMI CCSGG 2 cut(s) 714, 1089
BsaBI GATNNNNATC 1 cut(s) 588
BsaI GGTCTC 1 cut(s) 1512
BsaJI CCNNGG 4 cut(s) 650, 1101, 1636, 1747
BsaWI WCCGGW 3 cut(s) 1502, 2782, 3043
BsaXI ACNNNNNCTCC 4 cut(s) 301, 331, 2552, 2582
Bsc4I CCNNNNNNNGG 5 cut(s) 712, 713, 873, 1285, 1353
Bse118I RCCGGY 1 cut(s) 235
Bse1I ACTGG 8 cut(s) 245, 445, 496, 676, 788, 946, 1512, 2079
Bse21I CCTNAGG 1 cut(s) 2002
Bse3DI GCAATG 1 cut(s) 1744
Bse8I GATNNNNATC 1 cut(s) 588
BseAI TCCGGA 1 cut(s) 2782
BseBI CCWGG 6 cut(s) 572, 651, 801, 1286, 1562, 2713
BseDI CCNNGG 4 cut(s) 650, 1101, 1636, 1747
BseGI GGATG 5 cut(s) 10, 71, 660, 1148, 2677
BseJI GATNNNNATC 1 cut(s) 588
BseLI CCNNNNNNNGG 5 cut(s) 712, 713, 873, 1285, 1353
BseMI GCAATG 1 cut(s) 1744
BseMII CTCAG 5 cut(s) 831, 1487, 2286, 2461, 2823
BseNI ACTGG 8 cut(s) 245, 445, 496, 676, 788, 946, 1512, 2079
BseRI GAGGAG 2 cut(s) 1336, 2690
BseSI GKGCMC 2 cut(s) 12, 2146
BseX3I CGGCCG 1 cut(s) 237
BsgI GTGCAG 1 cut(s) 1273
Bsh1236I CGCG 1 cut(s) 1262
Bsh1285I CGRYCG 1 cut(s) 240
BshFI GGCC 8 cut(s) 239, 1066, 1238, 1404, 1560, 1861, 2308, 2711
BshNI GGYRCC 1 cut(s) 369
BsiEI CGRYCG 1 cut(s) 240
BsiHKAI GWGCWC 3 cut(s) 12, 1502, 2146
BsiHKCI CYCGRG 3 cut(s) 171, 1779, 2592
BsiSI CCGG 6 cut(s) 236, 713, 1089, 1503, 2783, 3044
BslFI GGGAC 2 cut(s) 707, 1590
BslI CCNNNNNNNGG 5 cut(s) 712, 713, 873, 1285, 1353
BsmAI GTCTC 4 cut(s) 742, 1449, 1512, 2784
BsmFI GGGAC 2 cut(s) 707, 1590
BsmI GAATGC 3 cut(s) 1936, 2011, 2878
BsnI GGCC 8 cut(s) 239, 1066, 1238, 1404, 1560, 1861, 2308, 2711
Bso31I GGTCTC 1 cut(s) 1512
BsoBI CYCGRG 3 cut(s) 171, 1779, 2592
Bsp1286I GDGCHC 4 cut(s) 12, 1502, 2146, 3024
Bsp13I TCCGGA 1 cut(s) 2782
BspACI CCGC 4 cut(s) 1398, 1817, 2051, 2566
BspANI GGCC 8 cut(s) 239, 1066, 1238, 1404, 1560, 1861, 2308, 2711
BspCNI CTCAG 5 cut(s) 830, 1488, 2285, 2460, 2822
BspEI TCCGGA 1 cut(s) 2782
BspFNI CGCG 1 cut(s) 1262
BspHI TCATGA 1 cut(s) 1969
BspLI GGNNCC 5 cut(s) 371, 569, 999, 1107, 2764
BspMAI CTGCAG 2 cut(s) 103, 1698
BspMI ACCTGC 2 cut(s) 1170, 1880
BspOI GCTAGC 1 cut(s) 170
BspPI GGATC 3 cut(s) 236, 413, 3035
BspT107I GGYRCC 1 cut(s) 369
BspTNI GGTCTC 1 cut(s) 1512
BsrDI GCAATG 1 cut(s) 1744
BsrFI RCCGGY 1 cut(s) 235
BsrI ACTGG 8 cut(s) 245, 445, 496, 676, 788, 946, 1512, 2079
BssAI RCCGGY 1 cut(s) 235
BssECI CCNNGG 4 cut(s) 650, 1101, 1636, 1747
BssSI CACGAG 2 cut(s) 988, 1348
BssT1I CCWWGG 3 cut(s) 1101, 1636, 1747
Bst2BI CACGAG 2 cut(s) 988, 1348
Bst2UI CCWGG 6 cut(s) 572, 651, 801, 1286, 1562, 2713
Bst6I CTCTTC 3 cut(s) 1383, 1780, 3169
BstAPI GCANNNNNTGC 2 cut(s) 122, 3104
BstDEI CTNAG 7 cut(s) 817, 1496, 2002, 2272, 2447, 2809, 3171
BstEII GGTNACC 1 cut(s) 464
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstF5I GGATG 5 cut(s) 10, 71, 660, 1148, 2677
BstFNI CGCG 1 cut(s) 1262
BstH2I RGCGCY 1 cut(s) 345
BstHHI GCGC 2 cut(s) 58, 344
BstMAI GTCTC 4 cut(s) 742, 1449, 1512, 2784
BstMCI CGRYCG 1 cut(s) 240
BstMWI GCNNNNNNNGC 7 cut(s) 75, 119, 122, 348, 1566, 3104, 3150
BstNI CCWGG 6 cut(s) 572, 651, 801, 1286, 1562, 2713
BstNSI RCATGY 4 cut(s) 2082, 2500, 2779, 3071
BstPI GGTNACC 1 cut(s) 464
BstSCI CCNGG 8 cut(s) 570, 649, 712, 799, 1087, 1284, 1560, 2711
BstSFI CTRYAG 3 cut(s) 99, 1694, 2259
BstSLI GKGCMC 2 cut(s) 12, 2146
BstUI CGCG 1 cut(s) 1262
BstV2I GAAGAC 2 cut(s) 525, 1320
BstX2I RGATCY 3 cut(s) 418, 1369, 3040
BstXI CCANNNNNNTGG 1 cut(s) 1116
BstYI RGATCY 3 cut(s) 418, 1369, 3040
BstZI CGGCCG 1 cut(s) 237
Bsu36I CCTNAGG 1 cut(s) 2002
BsuRI GGCC 8 cut(s) 239, 1066, 1238, 1404, 1560, 1861, 2308, 2711
BtgZI GCGATG 2 cut(s) 168, 1974
BtrI CACGTC 1 cut(s) 1359
BtsCI GGATG 5 cut(s) 10, 71, 660, 1148, 2677
BtsI GCAGTG 3 cut(s) 38, 422, 983
BtsIMutI CAGTG 9 cut(s) 38, 227, 422, 438, 633, 983, 1016, 2866, 3094
BveI ACCTGC 2 cut(s) 1170, 1880
CaiI CAGNNNCTG 2 cut(s) 122, 251
CciI TCATGA 1 cut(s) 1969
CfoI GCGC 2 cut(s) 58, 344
Cfr10I RCCGGY 1 cut(s) 235
Cfr13I GGNCC 3 cut(s) 507, 1105, 2306
CseI GACGC 1 cut(s) 818
CsiI ACCWGGT 1 cut(s) 570
DdeI CTNAG 7 cut(s) 817, 1496, 2002, 2272, 2447, 2809, 3171
EaeI YGGCCR 5 cut(s) 237, 1236, 1402, 1859, 2709
EagI CGGCCG 1 cut(s) 237
Eam1104I CTCTTC 3 cut(s) 1383, 1780, 3169
EarI CTCTTC 3 cut(s) 1383, 1780, 3169
EclXI CGGCCG 1 cut(s) 237
Eco130I CCWWGG 3 cut(s) 1101, 1636, 1747
Eco24I GRGCYC 1 cut(s) 3024
Eco31I GGTCTC 1 cut(s) 1512
Eco47I GGWCC 2 cut(s) 507, 1105
Eco52I CGGCCG 1 cut(s) 237
Eco57I CTGAAG 5 cut(s) 855, 1332, 1601, 1785, 2408
Eco81I CCTNAGG 1 cut(s) 2002
Eco88I CYCGRG 3 cut(s) 171, 1779, 2592
Eco91I GGTNACC 1 cut(s) 464
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 1 cut(s) 1105
EcoO65I GGTNACC 1 cut(s) 464
EcoRI GAATTC 1 cut(s) 1120
EcoRII CCWGG 6 cut(s) 570, 649, 799, 1284, 1560, 2711
EcoT14I CCWWGG 3 cut(s) 1101, 1636, 1747
EcoT22I ATGCAT 3 cut(s) 2084, 2794, 2923
EcoT38I GRGCYC 1 cut(s) 3024
ErhI CCWWGG 3 cut(s) 1101, 1636, 1747
FalI AAGNNNNNCTT 2 cut(s) 1574, 1606
FaqI GGGAC 2 cut(s) 707, 1590
FauNDI CATATG 1 cut(s) 365
FbaI TGATCA 2 cut(s) 589, 2530
FblI GTMKAC 2 cut(s) 1845, 2940
FokI GGATG 5 cut(s) 17, 78, 667, 1155, 2684
FriOI GRGCYC 1 cut(s) 3024
FspI TGCGCA 1 cut(s) 57
GlaI GCGC 2 cut(s) 57, 343
GsuI CTGGAG 2 cut(s) 963, 1146
HaeII RGCGCY 1 cut(s) 345
HaeIII GGCC 8 cut(s) 239, 1066, 1238, 1404, 1560, 1861, 2308, 2711
HapII CCGG 6 cut(s) 236, 713, 1089, 1503, 2783, 3044
HgaI GACGC 1 cut(s) 818
HhaI GCGC 2 cut(s) 58, 344
Hin6I GCGC 2 cut(s) 56, 342
HinP1I GCGC 2 cut(s) 56, 342
HincII GTYRAC 1 cut(s) 681
HindII GTYRAC 1 cut(s) 681
HindIII AAGCTT 1 cut(s) 2509
HpaII CCGG 6 cut(s) 236, 713, 1089, 1503, 2783, 3044
HphI GGTGA 2 cut(s) 940, 1215
Hpy166II GTNNAC 7 cut(s) 10, 510, 681, 1846, 2144, 2314, 2941
Hpy8I GTNNAC 7 cut(s) 10, 510, 681, 1846, 2144, 2314, 2941
HpyAV CCTTC 6 cut(s) 99, 830, 1320, 1576, 1952, 3200
HpyCH4IV ACGT 3 cut(s) 1358, 2544, 2661
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 119, 122, 348, 1566, 3104, 3150
HpyF3I CTNAG 7 cut(s) 817, 1496, 2002, 2272, 2447, 2809, 3171
HpySE526I ACGT 3 cut(s) 1358, 2544, 2661
HspAI GCGC 2 cut(s) 56, 342
Kpn2I TCCGGA 1 cut(s) 2782
KpnI GGTACC 1 cut(s) 373
Ksp22I TGATCA 2 cut(s) 589, 2530
LmnI GCTCC 3 cut(s) 839, 997, 1810
LweI GCATC 8 cut(s) 18, 56, 645, 1614, 1892, 2091, 2266, 2553
MabI ACCWGGT 1 cut(s) 570
MaeII ACGT 3 cut(s) 1358, 2544, 2661
MaeIII GTNAC 9 cut(s) 247, 332, 464, 487, 948, 1221, 2382, 2984, 3063
MfeI CAATTG 2 cut(s) 1945, 2554
MflI RGATCY 3 cut(s) 418, 1369, 3040
MhlI GDGCHC 4 cut(s) 12, 1502, 2146, 3024
MlsI TGGCCA 4 cut(s) 1238, 1404, 1861, 2711
MluI ACGCGT 1 cut(s) 1260
MluNI TGGCCA 4 cut(s) 1238, 1404, 1861, 2711
MlyI GAGTC 7 cut(s) 227, 569, 1163, 1229, 1791, 2175, 2439
MmeI TCCRAC 7 cut(s) 459, 975, 1189, 1344, 2701, 2721, 2931
Mox20I TGGCCA 4 cut(s) 1238, 1404, 1861, 2711
Mph1103I ATGCAT 3 cut(s) 2084, 2794, 2923
MroI TCCGGA 1 cut(s) 2782
MroXI GAANNNNTTC 2 cut(s) 526, 2026
MscI TGGCCA 4 cut(s) 1238, 1404, 1861, 2711
MseI TTAA 9 cut(s) 578, 1023, 1193, 1701, 1719, 1788, 1938, 2571, 2957
MslI CAYNNNNRTG 1 cut(s) 545
Msp20I TGGCCA 4 cut(s) 1238, 1404, 1861, 2711
MspA1I CMGCKG 1 cut(s) 1047
MspI CCGG 6 cut(s) 236, 713, 1089, 1503, 2783, 3044
MspR9I CCNGG 8 cut(s) 572, 651, 714, 801, 1089, 1286, 1562, 2713
MunI CAATTG 2 cut(s) 1945, 2554
Mva1269I GAATGC 3 cut(s) 1936, 2011, 2878
MvaI CCWGG 6 cut(s) 572, 651, 801, 1286, 1562, 2713
MvnI CGCG 1 cut(s) 1262
MwoI GCNNNNNNNGC 7 cut(s) 75, 119, 122, 348, 1566, 3104, 3150
NciI CCSGG 2 cut(s) 714, 1089
NdeI CATATG 1 cut(s) 365
NheI GCTAGC 1 cut(s) 166
NlaIV GGNNCC 5 cut(s) 371, 569, 999, 1107, 2764
NmuCI GTSAC 2 cut(s) 1221, 3063
NsbI TGCGCA 1 cut(s) 57
NsiI ATGCAT 3 cut(s) 2084, 2794, 2923
NspI RCATGY 4 cut(s) 2082, 2500, 2779, 3071
PaeI GCATGC 1 cut(s) 2082
PaeR7I CTCGAG 2 cut(s) 1779, 2592
PagI TCATGA 1 cut(s) 1969
PciI ACATGT 2 cut(s) 2775, 3067
PcsI WCGNNNNNNNCGW 2 cut(s) 880, 1355
PctI GAATGC 3 cut(s) 1936, 2011, 2878
PdmI GAANNNNTTC 2 cut(s) 526, 2026
PfeI GAWTC 8 cut(s) 260, 584, 628, 1442, 1670, 2516, 2586, 2618
PleI GAGTC 7 cut(s) 226, 568, 1162, 1228, 1790, 2174, 2439
PpsI GAGTC 7 cut(s) 226, 568, 1162, 1228, 1790, 2174, 2439
PpuMI RGGWCCY 1 cut(s) 1105
PscI ACATGT 2 cut(s) 2775, 3067
PsiI TTATAA 5 cut(s) 888, 1601, 2060, 3002, 3074
Psp5II RGGWCCY 1 cut(s) 1105
Psp6I CCWGG 6 cut(s) 570, 649, 799, 1284, 1560, 2711
PspEI GGTNACC 1 cut(s) 464
PspGI CCWGG 6 cut(s) 570, 649, 799, 1284, 1560, 2711
PspN4I GGNNCC 5 cut(s) 371, 569, 999, 1107, 2764
PspPI GGNCC 3 cut(s) 507, 1105, 2306
PspPPI RGGWCCY 1 cut(s) 1105
PspXI VCTCGAGB 1 cut(s) 2592
PstI CTGCAG 2 cut(s) 103, 1698
PstNI CAGNNNCTG 2 cut(s) 122, 251
PsuI RGATCY 3 cut(s) 418, 1369, 3040
PvuII CAGCTG 1 cut(s) 1047
RseI CAYNNNNRTG 1 cut(s) 545
SaqAI TTAA 9 cut(s) 578, 1023, 1193, 1701, 1719, 1788, 1938, 2571, 2957
Sau96I GGNCC 3 cut(s) 507, 1105, 2306
SchI GAGTC 7 cut(s) 227, 569, 1163, 1229, 1791, 2175, 2439
ScrFI CCNGG 8 cut(s) 572, 651, 714, 801, 1089, 1286, 1562, 2713
SduI GDGCHC 4 cut(s) 12, 1502, 2146, 3024
SexAI ACCWGGT 1 cut(s) 570
SfaNI GCATC 8 cut(s) 18, 56, 645, 1614, 1892, 2091, 2266, 2553
SfcI CTRYAG 3 cut(s) 99, 1694, 2259
Sfr274I CTCGAG 2 cut(s) 1779, 2592
SinI GGWCC 2 cut(s) 507, 1105
SlaI CTCGAG 2 cut(s) 1779, 2592
SmiMI CAYNNNNRTG 1 cut(s) 545
SmlI CTYRAG 5 cut(s) 1186, 1779, 1953, 2592, 2849
SmoI CTYRAG 5 cut(s) 1186, 1779, 1953, 2592, 2849
SphI GCATGC 1 cut(s) 2082
SsiI CCGC 4 cut(s) 1398, 1817, 2051, 2566
SspI AATATT 1 cut(s) 607
StyD4I CCNGG 8 cut(s) 570, 649, 712, 799, 1087, 1284, 1560, 2711
StyI CCWWGG 3 cut(s) 1101, 1636, 1747
TaiI ACGT 3 cut(s) 1361, 2547, 2664
TaqII GACCGA 1 cut(s) 864
TatI WGTACW 4 cut(s) 1527, 1630, 1949, 2493
TfiI GAWTC 8 cut(s) 260, 584, 628, 1442, 1670, 2516, 2586, 2618
Tru1I TTAA 9 cut(s) 578, 1023, 1193, 1701, 1719, 1788, 1938, 2571, 2957
Tru9I TTAA 9 cut(s) 578, 1023, 1193, 1701, 1719, 1788, 1938, 2571, 2957
TscAI CASTG 9 cut(s) 38, 234, 429, 445, 640, 983, 1016, 2866, 3094
TseFI GTSAC 2 cut(s) 1221, 3063
Tsp45I GTSAC 2 cut(s) 1221, 3063
TspGWI ACGGA 2 cut(s) 768, 1523
TspRI CASTG 9 cut(s) 38, 234, 429, 445, 640, 983, 1016, 2866, 3094
VneI GTGCAC 2 cut(s) 8, 2142
VpaK11BI GGWCC 2 cut(s) 507, 1105
XagI CCTNNNNNAGG 1 cut(s) 1283
XbaI TCTAGA 2 cut(s) 1673, 2218
XceI RCATGY 4 cut(s) 2082, 2500, 2779, 3071
XcmI CCANNNNNNNNNTGG 1 cut(s) 2509
XhoI CTCGAG 2 cut(s) 1779, 2592
XmiI GTMKAC 2 cut(s) 1845, 2940
XmnI GAANNNNTTC 2 cut(s) 526, 2026
Zsp2I ATGCAT 3 cut(s) 2084, 2794, 2923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.