Rh2DG575100

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000412
Physical Location & Seq
Reverse (-)
80533043 .. 80537325
4283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG575100.1

Sequence Viewer

Length: 2202 bp
ATGGTAAATAGCATGGTATCTTACATCTTCTTGTATATAGTACTATTGCTTTGCTGTTATGATTACCTATTTTGTTCTGCAAGAGATACGCTGACACCAGCCGATCCAGTTACTGATGACGAATCAGGAACTCTTGTTTCAGCAGGAGGAAAATTTGAATTGGGTTTCTTTACCCCTACTCCTACAAGGAAAAGTAACTTGGGCGCTGATAGCAAATTTGTTGGCATATGGTACCATGAGGTCACTCCAAAAACAGTTGTATGGGTTGCCAACAGAGAAGATCCACTGCCTGCCAATTCCACTGGGCTTCTCACAATCGAAGATGGTAACCTCTGCGTGTTGGATAATGTTACTGGAAAGTCTTATTGGTCCACAAACATCGGAACATCTTCGTCTTCTAACATGATTGTGAAAATAATGGAGTCTGGGAACCTGGTGTTAATGGATTCTGATCAGATGGCAGCAAATATTCTGTGGCAGAGCTTTCAGAAGCCCACTGATACATTCATTCCTGGGATGCTAATGGATAAAGACTTCCAGTTGACTTCTTGGAGGGACGAAGATGACCCAAGACCGGGAAACTTCACCTTCAAACTCGATCAGAGTGAGAGACAGTATATCATAATGAAGAAGTCGCTTCCGTACTGGAAAAGTGGAGAGCCAGGTAATCATTTCAGCTCAGATGAAATGCGTCCTGAAGGAGCTTACTTGCTATCAAATTTCAGCCCCAGAAGTCGATCATCTCGTTATAATGTTCAAATTGTGATACCTTTGGATTACAATTATACACGGTTGGTGATAAATTTTACTGGAGAGTTACGGTTTTGGACTTGGAATGAAAACAAGAAGCAGTGGCTTCTTTCGTGGTCGGAGCCAAAAGATCAGTGTAGCGAGTTTAACCCTTGTGGAAGTTTTGGCAGCTGCAATAATAATAATTGGCCTTTGGTATGCAAATGTTTGCCCGGTTTCAAGCCCAAGTACCCAAATAATTGGAATTCTGGAGATTTTTCAGGTGGATGTGATAGAGAGTCATCAATCTCTTACAACAACAGCAGGTTCTTGAGCTTAAAGATGATGAAAGTTGGAGAGGCAGAGTCACCGTTCGATGTGGCCAATGAAACAGAGTGCAGGAACGAGTGCCTAGAGAAAACCCTGTGCCAGGCTTACTCGTATGGCGTTCTAGCTGAAGACAGAGCTCAAAGGGGTCCTGCTACTACCAGCACTTCCTCGTGCTGGACGTGGTTGGAAGATCTAAATAATCTTGTAGAAGAGTATGGCGGTGGCCACAATATCTTTGTTCGAGTTGCCTCGTCTGATATAGAATCTACTGTAAGAGACTGCGAGCCTTGTGGCACAACGACAATACCTTATCCCCTGAGCACCGGACTGGACTGTGGAGACCCCATGTACTTCCGTTTCAACTGCAACACTTCGACAGGCCAGGTTAGCTACATGGGACTGAAGGACACTTTTCGAGTTATAAGCATCAGACCAAGTACGCAAAAATTTGTACTCCAAGGGTTGCCAGCCAAAAAGGTCGATCATTGTGATTCTAGAAACAGAGACAAAACTCTGCAGCTTAACCCATCATTCCCATTTAAGATAAGTAGTTGGTGCAATGCTGACCTTGGAAACTTTAGTTCTGAAGTATTCTCTTCTCGAGTCCTTAATGTAGTGGAGTTGGGTTGGGAGCTACCGCCGGAACCAGCCTGCAATACATCAGTAGACTGCAAGGGTTGGCCAAATTCAACCTGCAATCCAGCAAGAGATGGAATGAAAAGATGCCTTTGCAACAAGAGTTTTCAATGGAATGCCTTTAACTTCAATTGTACTCAAGAAGGTAGTCTTCATGAGCCATCAAACTCTCCATCGCCATCGTTCTTACGAGAGCATTTAAGCAGAAAAGCATGGGAACTCTGGACAGGAGACAAGGTGTTGGATTTAATGGACAAGAATTTGGAAGAAAGTTGCAACAGAAGTGAATTTGTAAGGTGTGTAAATGTTGGGCTCTTATGCGTACAAGAAGATCCGGTTGATCGCCCTACAATGTCAAATGTTATTACCTTGCTTGACAGTGAAACTGCAATCCCTGCAACTCCTAAACAACCATCCTTTTTCATAAGGAGAGGCAACTCTAGCACAGCTTCCTCTTCTACTAAGCCAGAGACAGTTTCTGAAATAACTGCTCTGGAAGGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

733

Amino Acids

82.4

Weight (kDa)

5.1

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 180 3.1e-26 D-mannose binding lectin
S_locus_glycop PF00954 216 - 326 2.1e-20 S-locus glycoprotein domain
PAN_2 PF08276 349 - 420 2.9e-07 PAN-like domain
GUB_WAK_bind PF13947 447 - 504 8.1e-06 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 750, 1481
Acc36I ACCTGC 2 cut(s) 1044, 1760
Acc65I GGTACC 1 cut(s) 231
AccB1I GGYRCC 1 cut(s) 231
AccI GTMKAC 1 cut(s) 1725
AciI CCGC 2 cut(s) 1278, 1697
AclWI GGATC 3 cut(s) 98, 275, 2021
AcoI YGGCCR 3 cut(s) 1110, 1282, 1739
AcsI RAATTY 9 cut(s) 152, 215, 718, 802, 994, 1505, 1744, 1954, 1982
AcuI CTGAAG 4 cut(s) 717, 1206, 1481, 1665
AfaI GTAC 9 cut(s) 42, 233, 644, 980, 1409, 1498, 1512, 1831, 2019
AfiI CCNNNNNNNGG 4 cut(s) 574, 575, 1159, 1233
AgsI TTSAA 8 cut(s) 158, 592, 758, 970, 1420, 1749, 1805, 1825
AjiI CACGTC 1 cut(s) 1239
AjnI CCWGG 5 cut(s) 432, 511, 661, 1158, 1440
AjuI GAANNNNNNNTTGG 4 cut(s) 182, 214, 349, 381
Alw21I GWGCWC 2 cut(s) 1198, 1382
Alw26I GTCTC 6 cut(s) 604, 1329, 1392, 1557, 1920, 2159
AlwI GGATC 3 cut(s) 98, 275, 2021
AlwNI CAGNNNCTG 2 cut(s) 113, 2174
Ama87I CYCGRG 1 cut(s) 1659
AoxI GGCC 5 cut(s) 938, 1110, 1282, 1438, 1739
ApeKI GCWGC 4 cut(s) 461, 918, 921, 1576
ApoI RAATTY 9 cut(s) 152, 215, 718, 802, 994, 1505, 1744, 1954, 1982
Asp700I GAANNNNTTC 1 cut(s) 388
Asp718I GGTACC 1 cut(s) 231
AspLEI GCGC 1 cut(s) 206
AspS9I GGNCC 2 cut(s) 369, 1205
AsuC2I CCSGG 2 cut(s) 576, 963
AsuHPI GGTGA 3 cut(s) 577, 808, 1089
AvaI CYCGRG 1 cut(s) 1659
AvaII GGWCC 2 cut(s) 369, 1205
BalI TGGCCA 3 cut(s) 1112, 1284, 1741
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 2 cut(s) 1198, 2010
BauI CACGAG 1 cut(s) 1228
BbsI GAAGAC 3 cut(s) 387, 1194, 1838
Bbv12I GWGCWC 2 cut(s) 1198, 1382
BbvI GCAGC 4 cut(s) 473, 908, 930, 1588
BccI CCATC 8 cut(s) 317, 451, 1594, 1763, 1864, 1876, 1882, 2116
BciT130I CCWGG 5 cut(s) 434, 513, 663, 1160, 1442
BclI TGATCA 1 cut(s) 451
BcnI CCSGG 2 cut(s) 576, 963
BcoDI GTCTC 6 cut(s) 604, 1329, 1392, 1557, 1920, 2159
BfaI CTAG 4 cut(s) 1142, 1181, 1554, 2136
BfmI CTRYAG 1 cut(s) 1574
BfoI RGCGCY 1 cut(s) 207
BfuAI ACCTGC 2 cut(s) 1044, 1760
BglII AGATCT 1 cut(s) 1249
BisI GCNGC 4 cut(s) 462, 919, 922, 1577
BlsI GCNGC 4 cut(s) 463, 920, 923, 1578
BmcAI AGTACT 1 cut(s) 42
Bme1390I CCNGG 7 cut(s) 434, 513, 576, 663, 963, 1160, 1442
Bme18I GGWCC 2 cut(s) 369, 1205
BmeT110I CYCGRG 1 cut(s) 1659
BmgBI CACGTC 1 cut(s) 1239
BmgT120I GGNCC 2 cut(s) 369, 1205
BmiI GGNNCC 5 cut(s) 233, 431, 873, 1206, 1704
BmrFI CCNGG 7 cut(s) 434, 513, 576, 663, 963, 1160, 1442
BmrI ACTGGG 1 cut(s) 312
BmsI GCATC 3 cut(s) 507, 1494, 1772
BmuI ACTGGG 1 cut(s) 312
BpiI GAAGAC 3 cut(s) 387, 1194, 1838
BpmI CTGGAG 2 cut(s) 831, 1020
Bpu10I CCTNAGC 1 cut(s) 1376
BpuEI CTTGAG 2 cut(s) 1081, 1818
BpuMI CCSGG 2 cut(s) 576, 963
BsaBI GATNNNNATC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 1392
BsaJI CCNNGG 3 cut(s) 512, 1516, 1627
BsaWI WCCGGW 2 cut(s) 1382, 2029
BsaXI ACNNNNNCTCC 4 cut(s) 163, 193, 1917, 1947
Bsc4I CCNNNNNNNGG 4 cut(s) 574, 575, 1159, 1233
Bse1I ACTGG 7 cut(s) 107, 307, 358, 538, 650, 814, 1392
Bse3DI GCAATG 1 cut(s) 1624
Bse8I GATNNNNATC 1 cut(s) 450
BseBI CCWGG 5 cut(s) 434, 513, 663, 1160, 1442
BseDI CCNNGG 3 cut(s) 512, 1516, 1627
BseGI GGATG 3 cut(s) 522, 1022, 2108
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 4 cut(s) 574, 575, 1159, 1233
BseMI GCAATG 1 cut(s) 1624
BseMII CTCAG 2 cut(s) 693, 1367
BseNI ACTGG 7 cut(s) 107, 307, 358, 538, 650, 814, 1392
BseXI GCAGC 4 cut(s) 473, 908, 930, 1588
BsgI GTGCAG 1 cut(s) 1147
BshFI GGCC 5 cut(s) 940, 1112, 1284, 1440, 1741
BshNI GGYRCC 1 cut(s) 231
BsiHKAI GWGCWC 2 cut(s) 1198, 1382
BsiHKCI CYCGRG 1 cut(s) 1659
BsiSI CCGG 5 cut(s) 575, 963, 1383, 1700, 2030
BslFI GGGAC 2 cut(s) 569, 1470
BslI CCNNNNNNNGG 4 cut(s) 574, 575, 1159, 1233
BsmAI GTCTC 6 cut(s) 604, 1329, 1392, 1557, 1920, 2159
BsmFI GGGAC 2 cut(s) 569, 1470
BsmI GAATGC 1 cut(s) 1816
BsnI GGCC 5 cut(s) 940, 1112, 1284, 1440, 1741
Bso31I GGTCTC 1 cut(s) 1392
BsoBI CYCGRG 1 cut(s) 1659
Bsp1286I GDGCHC 3 cut(s) 1198, 1382, 2010
BspACI CCGC 2 cut(s) 1278, 1697
BspANI GGCC 5 cut(s) 940, 1112, 1284, 1440, 1741
BspCNI CTCAG 2 cut(s) 692, 1368
BspHI TCATGA 1 cut(s) 1849
BspLI GGNNCC 5 cut(s) 233, 431, 873, 1206, 1704
BspMAI CTGCAG 1 cut(s) 1578
BspMI ACCTGC 2 cut(s) 1044, 1760
BspPI GGATC 3 cut(s) 98, 275, 2021
BspT107I GGYRCC 1 cut(s) 231
BspTNI GGTCTC 1 cut(s) 1392
BsrDI GCAATG 1 cut(s) 1624
BsrI ACTGG 7 cut(s) 107, 307, 358, 538, 650, 814, 1392
BssECI CCNNGG 3 cut(s) 512, 1516, 1627
BssSI CACGAG 1 cut(s) 1228
BssT1I CCWWGG 2 cut(s) 1516, 1627
Bst2BI CACGAG 1 cut(s) 1228
Bst2UI CCWGG 5 cut(s) 434, 513, 663, 1160, 1442
Bst4CI ACNGT 9 cut(s) 256, 615, 792, 822, 1101, 1330, 1394, 2075, 2170
Bst6I CTCTTC 3 cut(s) 1263, 1660, 2155
BstAPI GCANNNNNTGC 1 cut(s) 2090
BstC8I GCNNGC 4 cut(s) 291, 1343, 1527, 1711
BstDEI CTNAG 3 cut(s) 679, 1376, 2157
BstEII GGTNACC 1 cut(s) 326
BstENI CCTNNNNNAGG 1 cut(s) 1157
BstF5I GGATG 3 cut(s) 522, 1022, 2108
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 1 cut(s) 206
BstMAI GTCTC 6 cut(s) 604, 1329, 1392, 1557, 1920, 2159
BstMWI GCNNNNNNNGC 4 cut(s) 210, 1446, 2090, 2136
BstNI CCWGG 5 cut(s) 434, 513, 663, 1160, 1442
BstPI GGTNACC 1 cut(s) 326
BstSCI CCNGG 7 cut(s) 432, 511, 574, 661, 961, 1158, 1440
BstSFI CTRYAG 1 cut(s) 1574
BstV1I GCAGC 4 cut(s) 473, 908, 930, 1588
BstV2I GAAGAC 3 cut(s) 387, 1194, 1838
BstX2I RGATCY 3 cut(s) 280, 1249, 2026
BstXI CCANNNNNNTGG 1 cut(s) 990
BstYI RGATCY 3 cut(s) 280, 1249, 2026
BsuRI GGCC 5 cut(s) 940, 1112, 1284, 1440, 1741
BtgZI GCGATG 1 cut(s) 1854
BtrI CACGTC 1 cut(s) 1239
BtsCI GGATG 3 cut(s) 522, 1022, 2108
BtsI GCAGTG 2 cut(s) 284, 857
BtsIMutI CAGTG 6 cut(s) 284, 300, 495, 857, 890, 2080
BveI ACCTGC 2 cut(s) 1044, 1760
Cac8I GCNNGC 4 cut(s) 291, 1343, 1527, 1711
CaiI CAGNNNCTG 2 cut(s) 113, 2174
CciI TCATGA 1 cut(s) 1849
CfoI GCGC 1 cut(s) 206
Cfr13I GGNCC 2 cut(s) 369, 1205
CseI GACGC 1 cut(s) 680
CsiI ACCWGGT 1 cut(s) 432
Csp6I GTAC 9 cut(s) 41, 232, 643, 979, 1408, 1497, 1511, 1830, 2018
CviAII CATG 7 cut(s) 13, 236, 403, 1405, 1453, 1850, 1908
CviQI GTAC 9 cut(s) 41, 232, 643, 979, 1408, 1497, 1511, 1830, 2018
DdeI CTNAG 3 cut(s) 679, 1376, 2157
EaeI YGGCCR 3 cut(s) 1110, 1282, 1739
Eam1104I CTCTTC 3 cut(s) 1263, 1660, 2155
EarI CTCTTC 3 cut(s) 1263, 1660, 2155
Ecl136II GAGCTC 1 cut(s) 1196
Eco130I CCWWGG 2 cut(s) 1516, 1627
Eco24I GRGCYC 2 cut(s) 1198, 2010
Eco31I GGTCTC 1 cut(s) 1392
Eco47I GGWCC 2 cut(s) 369, 1205
Eco53kI GAGCTC 1 cut(s) 1196
Eco57I CTGAAG 4 cut(s) 717, 1206, 1481, 1665
Eco88I CYCGRG 1 cut(s) 1659
Eco91I GGTNACC 1 cut(s) 326
EcoICRI GAGCTC 1 cut(s) 1196
EcoNI CCTNNNNNAGG 1 cut(s) 1157
EcoO109I RGGNCCY 1 cut(s) 1205
EcoO65I GGTNACC 1 cut(s) 326
EcoRI GAATTC 1 cut(s) 994
EcoRII CCWGG 5 cut(s) 432, 511, 661, 1158, 1440
EcoT14I CCWWGG 2 cut(s) 1516, 1627
EcoT38I GRGCYC 2 cut(s) 1198, 2010
ErhI CCWWGG 2 cut(s) 1516, 1627
FaeI CATG 7 cut(s) 16, 239, 406, 1408, 1456, 1853, 1911
FalI AAGNNNNNCTT 2 cut(s) 1830, 1862
FaqI GGGAC 2 cut(s) 569, 1470
FatI CATG 7 cut(s) 12, 235, 402, 1404, 1452, 1849, 1907
FauNDI CATATG 1 cut(s) 227
FbaI TGATCA 1 cut(s) 451
FblI GTMKAC 1 cut(s) 1725
Fnu4HI GCNGC 4 cut(s) 462, 919, 922, 1577
FokI GGATG 3 cut(s) 529, 1029, 2095
FriOI GRGCYC 2 cut(s) 1198, 2010
Fsp4HI GCNGC 4 cut(s) 462, 919, 922, 1577
FspBI CTAG 4 cut(s) 1142, 1181, 1554, 2136
GlaI GCGC 1 cut(s) 205
GluI GCNGC 4 cut(s) 462, 919, 922, 1577
GsuI CTGGAG 2 cut(s) 831, 1020
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 5 cut(s) 940, 1112, 1284, 1440, 1741
HapII CCGG 5 cut(s) 575, 963, 1383, 1700, 2030
HgaI GACGC 1 cut(s) 680
HhaI GCGC 1 cut(s) 206
Hin1II CATG 7 cut(s) 16, 239, 406, 1408, 1456, 1853, 1911
Hin6I GCGC 1 cut(s) 204
HinP1I GCGC 1 cut(s) 204
HincII GTYRAC 1 cut(s) 543
HindII GTYRAC 1 cut(s) 543
HinfI GANTC 8 cut(s) 122, 422, 446, 1028, 1094, 1322, 1550, 1662
HpaII CCGG 5 cut(s) 575, 963, 1383, 1700, 2030
HphI GGTGA 3 cut(s) 577, 808, 1089
Hpy166II GTNNAC 3 cut(s) 372, 543, 1726
Hpy8I GTNNAC 3 cut(s) 372, 543, 1726
HpyAV CCTTC 5 cut(s) 598, 692, 1456, 1832, 2186
HpyCH4III ACNGT 9 cut(s) 256, 615, 792, 822, 1101, 1330, 1394, 2075, 2170
HpyCH4IV ACGT 1 cut(s) 1238
HpyF10VI GCNNNNNNNGC 4 cut(s) 210, 1446, 2090, 2136
HpyF3I CTNAG 3 cut(s) 679, 1376, 2157
HpySE526I ACGT 1 cut(s) 1238
Hsp92II CATG 7 cut(s) 16, 239, 406, 1408, 1456, 1853, 1911
HspAI GCGC 1 cut(s) 204
KpnI GGTACC 1 cut(s) 235
Ksp22I TGATCA 1 cut(s) 451
LmnI GCTCC 3 cut(s) 701, 871, 1690
Lsp1109I GCAGC 4 cut(s) 473, 908, 930, 1588
LweI GCATC 3 cut(s) 507, 1494, 1772
MabI ACCWGGT 1 cut(s) 432
MaeI CTAG 4 cut(s) 1142, 1181, 1554, 2136
MaeII ACGT 1 cut(s) 1238
MaeIII GTNAC 7 cut(s) 109, 194, 241, 326, 349, 816, 1095
MfeI CAATTG 1 cut(s) 1825
MflI RGATCY 3 cut(s) 280, 1249, 2026
MhlI GDGCHC 3 cut(s) 1198, 1382, 2010
MlsI TGGCCA 3 cut(s) 1112, 1284, 1741
MluNI TGGCCA 3 cut(s) 1112, 1284, 1741
MlyI GAGTC 4 cut(s) 431, 1037, 1103, 1671
MmeI TCCRAC 5 cut(s) 321, 849, 1063, 1224, 1917
MnlI CCTC 9 cut(s) 140, 232, 341, 546, 1081, 1237, 1318, 2120, 2158
Mox20I TGGCCA 3 cut(s) 1112, 1284, 1741
MroXI GAANNNNTTC 1 cut(s) 388
MscI TGGCCA 3 cut(s) 1112, 1284, 1741
MseI TTAA 9 cut(s) 440, 897, 1067, 1581, 1599, 1668, 1818, 1895, 1943
MslI CAYNNNNRTG 1 cut(s) 407
Msp20I TGGCCA 3 cut(s) 1112, 1284, 1741
MspA1I CMGCKG 1 cut(s) 921
MspI CCGG 5 cut(s) 575, 963, 1383, 1700, 2030
MspR9I CCNGG 7 cut(s) 434, 513, 576, 663, 963, 1160, 1442
MunI CAATTG 1 cut(s) 1825
Mva1269I GAATGC 1 cut(s) 1816
MvaI CCWGG 5 cut(s) 434, 513, 663, 1160, 1442
MwoI GCNNNNNNNGC 4 cut(s) 210, 1446, 2090, 2136
NciI CCSGG 2 cut(s) 576, 963
NdeI CATATG 1 cut(s) 227
NlaIII CATG 7 cut(s) 16, 239, 406, 1408, 1456, 1853, 1911
NlaIV GGNNCC 5 cut(s) 233, 431, 873, 1206, 1704
NmuCI GTSAC 2 cut(s) 241, 1095
PaeR7I CTCGAG 1 cut(s) 1659
PagI TCATGA 1 cut(s) 1849
PcsI WCGNNNNNNNCGW 2 cut(s) 742, 1235
PctI GAATGC 1 cut(s) 1816
PdmI GAANNNNTTC 1 cut(s) 388
PfeI GAWTC 4 cut(s) 122, 446, 1322, 1550
PkrI GCNGC 4 cut(s) 463, 920, 923, 1578
PleI GAGTC 4 cut(s) 430, 1036, 1102, 1670
PpsI GAGTC 4 cut(s) 430, 1036, 1102, 1670
PpuMI RGGWCCY 1 cut(s) 1205
PsiI TTATAA 2 cut(s) 750, 1481
Psp124BI GAGCTC 1 cut(s) 1198
Psp5II RGGWCCY 1 cut(s) 1205
Psp6I CCWGG 5 cut(s) 432, 511, 661, 1158, 1440
PspEI GGTNACC 1 cut(s) 326
PspGI CCWGG 5 cut(s) 432, 511, 661, 1158, 1440
PspN4I GGNNCC 5 cut(s) 233, 431, 873, 1206, 1704
PspPI GGNCC 2 cut(s) 369, 1205
PspPPI RGGWCCY 1 cut(s) 1205
PstI CTGCAG 1 cut(s) 1578
PstNI CAGNNNCTG 2 cut(s) 113, 2174
PsuI RGATCY 3 cut(s) 280, 1249, 2026
PvuII CAGCTG 1 cut(s) 921
RsaI GTAC 9 cut(s) 42, 233, 644, 980, 1409, 1498, 1512, 1831, 2019
RsaNI GTAC 9 cut(s) 41, 232, 643, 979, 1408, 1497, 1511, 1830, 2018
RseI CAYNNNNRTG 1 cut(s) 407
SacI GAGCTC 1 cut(s) 1198
SaqAI TTAA 9 cut(s) 440, 897, 1067, 1581, 1599, 1668, 1818, 1895, 1943
SatI GCNGC 4 cut(s) 462, 919, 922, 1577
Sau96I GGNCC 2 cut(s) 369, 1205
ScaI AGTACT 1 cut(s) 42
SchI GAGTC 4 cut(s) 431, 1037, 1103, 1671
ScrFI CCNGG 7 cut(s) 434, 513, 576, 663, 963, 1160, 1442
SduI GDGCHC 3 cut(s) 1198, 1382, 2010
SexAI ACCWGGT 1 cut(s) 432
SfaNI GCATC 3 cut(s) 507, 1494, 1772
SfcI CTRYAG 1 cut(s) 1574
Sfr274I CTCGAG 1 cut(s) 1659
SinI GGWCC 2 cut(s) 369, 1205
SlaI CTCGAG 1 cut(s) 1659
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 3 cut(s) 1060, 1659, 1833
SmoI CTYRAG 3 cut(s) 1060, 1659, 1833
SsiI CCGC 2 cut(s) 1278, 1697
SspI AATATT 1 cut(s) 469
SspMI CTAG 4 cut(s) 1142, 1181, 1554, 2136
SstI GAGCTC 1 cut(s) 1198
StyD4I CCNGG 7 cut(s) 432, 511, 574, 661, 961, 1158, 1440
StyI CCWWGG 2 cut(s) 1516, 1627
TaaI ACNGT 9 cut(s) 256, 615, 792, 822, 1101, 1330, 1394, 2075, 2170
TaiI ACGT 1 cut(s) 1241
TaqI TCGA 9 cut(s) 318, 597, 736, 1104, 1300, 1433, 1474, 1539, 1660
TatI WGTACW 4 cut(s) 40, 1407, 1510, 1829
TfiI GAWTC 4 cut(s) 122, 446, 1322, 1550
Tru1I TTAA 9 cut(s) 440, 897, 1067, 1581, 1599, 1668, 1818, 1895, 1943
Tru9I TTAA 9 cut(s) 440, 897, 1067, 1581, 1599, 1668, 1818, 1895, 1943
TscAI CASTG 6 cut(s) 291, 307, 502, 857, 890, 2080
TseFI GTSAC 2 cut(s) 241, 1095
TseI GCWGC 4 cut(s) 461, 918, 921, 1576
Tsp45I GTSAC 2 cut(s) 241, 1095
TspDTI ATGAA 9 cut(s) 496, 641, 699, 852, 1091, 1131, 1790, 1838, 2107
TspGWI ACGGA 2 cut(s) 630, 1403
TspRI CASTG 6 cut(s) 291, 307, 502, 857, 890, 2080
VpaK11BI GGWCC 2 cut(s) 369, 1205
XagI CCTNNNNNAGG 1 cut(s) 1157
XapI RAATTY 9 cut(s) 152, 215, 718, 802, 994, 1505, 1744, 1954, 1982
XbaI TCTAGA 1 cut(s) 1553
XhoI CTCGAG 1 cut(s) 1659
XmiI GTMKAC 1 cut(s) 1725
XmnI GAANNNNTTC 1 cut(s) 388
XspI CTAG 4 cut(s) 1142, 1181, 1554, 2136
ZrmI AGTACT 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.