MD17G1087900.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
7245837 .. 7249870
4034 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1087900.v1.1.491

Sequence Viewer

Length: 3105 bp
ATGGTGATCCAAAGCAAGATCAGGAAGTTAATCATCATTAGCTGGTCTGCTAATCACATGTTCTTCTGTATGTTCTTTCTCTACTCTTTCTTGTTATGCACTTGTTTTCTGTGTTGCATTGCTAAAGATACCATGACACTTGGCAGCTTGATTAGTGATGATCAAGGTGATACTATAGTTTCATCAGGAGAGAAATTCGAACTCGGGTTTTTTACTCCTAATGGAAGCTCTCAGAGTAGAAGATATGTTGGAATATGGTACCATGGATCGAATCCGAAAACCGTTGTGTGGGTTGCCAATAGGGACAAGCCGCTTTCAGATGCTCATGGTGCTTTTGGTATTGCAGAAGACGGAAACCTTAAGGTTTTGGATGCCGGCGGTAAAATGTACTGGTCTACAAGCCTTGAGAGATCATCTTCAGACAGGGCTGCAAAGCTCATGGACTCTGGGAATCTTGTTGTTGTGAGCAATGAAGATCAAGGGCGAATTCTTTGGCAGAGTTTCGAAAATCCAACCGACACATTTCTTCCTGGCATGAAAATGAATGAAAATTTAGTACTTACTTCATGGACAAGTAATGTTGATCCTGCAACTGGGAATTTCACATTTCAGCAGGATCGAGAGGGAACAAACCAATTTGTTATCTGGAAAAGATCGGTGAGGTACTGGAAAAGCGAAGTTTCTGGAAATTTCATTAGTTCAGATGAGATGTCTCCTGCAGTTCTTTACATGCTATCAAATTTCACCTCTACCCCGGTCCGTAATGACTTTTTGCCACATCTAACGTCATCTCTGTACAATGCAACGAGACTAGTTATGAGTTCTTCGGGCCAAATTCGGTATCTGTTGTGGGATCATGAGAAGGTTTGGTCTTTGATCTGGTCAGATCCTAGAGATGGTTGCAGCCTGTATAATACATGCGGTAATTTTGGGAGTTGCAATAGCCAAAATGGTTTGGTTTGCAGGTGCTTACCTGGTTTTAAGCCTACTTCGCCGGATAATTGGAACAATGGAGATTATTCAGCTGGTTGTGTCAGGAAATCAACAATTTGCGGCAACAATGCTGTGAGCGACGCGTTCTTGAGTTTAAAGATGATGAAGGTGGGAAACCCCGATTCGCAATTTAATGCCAAAAGTGAGATGGAATGCAAAATAGAGTGCCTTAACAACTGCCAGTGCCAAGCTTATTCATACGAGGAGGTTGACATTGCACGAAGGGGTGGGAGTAATGGTTCCACATGCTGGATTTGGTCAGAGGATGTTAGAAATCTTCAGGAGGAGTATGACAGCGGCCAGAACCTCCAGGTTCGTGTGGCAGTTTCAGATATAGAATCAACATCGAGGAATTGCGAAACTTGTGGTACAAACCTGATCCCGTACCCCCTGAGCACTGGACCAAAATGTGGTGATCTTACATACTATAGTTTCAAATGCAACACCGCCACGGGCCAGGTTAGCTTTGAGGCACCCAGTGGCACCTACAAAGTCACAAGCATCAATCCGGATACACAAAAATTTGTCATCCAAGCCAAAAATGCAGACAACTGCAGAAATCAAAATTTCCTACAGCTCAATCAATCGTCTCCCTTTCATGTGATCAACAAGTGCAATGCTGAATTGTCTGAATTCAGTTCTGATTTCTCATTTAAAGGAAGACATGAGGTTGAAATTTCTTGGGATCCGCCATTGGAACCACTTTGTTCTTCATCTACAGACTGCAGGGACTGGCCCCGGTCTACTTGTAACACTACCAAAGAGGGGACGAAAAGGTGCCTCTGCACCGCGGACTATAAATGGGATAGCTTGACTTTGAATTGTACTCAAGAAGTTGGTAACGGTAAGAAAACTGGCGAGCGACGAAAAAAGACCGTGGCTCTAATAGTTGTAGTAACTTTTGTAAGTGTAGCTGTTCTGGCTATTCTCTCAAGTACCTTCGTTTATGCTTACTTATGGAGAAGAAGATGGGTCAAGCGACAAGAAGGCAGGGAAATCGGTCAAAAGAATTCGGTGCTTCACTTTTATGACAGTGGGAGAAAAGTTAAAAGTTTTATCGAATCAGGCCGATTTAAAGATGATGATACAGAAGGCTTTGATGTACCATTTTTTGATTTGGAAAGTATACTGGTTGCTACAGATTACTTCTCCAATGCGAACAAACTTGGACAAGGCGGCTTTGGCCCTGTTTACAAGGGTAAGCTTCCTGGGGGACAAGAAATCGCGGTCAAGAGGCTGTCAAGCTGTTCGGGACAAGGCTTAGAGGAATTCAAGAATGAGGTTTTGTTGATTGCCAAACTCCAACATCGAAACCTGGTTCAACTTTTGGGCTATTGTGTCGAGGGAGAAGAAAAGATGTTAGTCTATGAATATATGGCTAACAAAAGCTTGGACTCATTCATATTTGATCGAAAACTATGTGTGTCATTAAACTGGGATATGCGCTTCAATATCATTTTGGGAATTGCCCGGGGTCTGCTTTATCTTCACCAAGATTCTAGGTTAAGGATTATTCATAGAGACCTGAAAACCAGCAACATTCTTCTGGGCGAGGAGATGAATCCCAAAATCTCTGACTTTGGTTTGGCTAGGATCTTCGGAGGCAACGAAACTTCAGCAAACACCAACAGAGTAGTTGGAACATATGGCTATATGTCTCCAGAGTATGCATTAGATGGGTTATTTTCAGTAAAATCCGATGTTTTCAGCTTCGGTGTAGTTGTAATTGAGGTCATCAGTGGGAAAAGGAACACCGGGTTTTTTCAGCAGGAAAAATCTTTGAGTCTTCTAGGCTATGCATGGCACTTGTGGAAAGAAGAGAAGGCATTGGATTTACTCGAGCAGACACTGCGTCAAAGCTGCAACCAGGACGAGTACTTAAAATGTGTCAACGTAGGGCTCTTATGTGTACAAGAAGACCCGGGTGATCGCCCAACCATGTCACAAGTAGTTTTCATGCTAGGCAGTGAAACTGCAACGATTCCAATCCCTAAACAACCCGCCTTTATTGTTAGGCGGTGCCCTTCTAGAAGTAGCCCGCCTTCTTCCTCAAGCAAACCAGAAACATTTTCTAACAATGAGTTAACCATCACTTTAGAAGATGGTCGGTAG

Protein Analysis

1035

Amino Acids

116.04

Weight (kDa)

6.27

Isoelectric Point (pI)

45.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 94 - 185 1.5e-30 D-mannose binding lectin
S_locus_glycop PF00954 229 - 330 9.6e-21 S-locus glycoprotein domain
PAN_2 PF08276 355 - 423 5.3e-12 PAN-like domain
GUB_WAK_bind PF13947 450 - 508 4.8e-06 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 715 - 982 2.7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 717 - 983 2.6e-49 Protein tyrosine and serine/threonine kinase
DUF3403 PF11883 987 - 1034 3.8e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 954
Acc36I ACCTGC 1 cut(s) 954
Acc65I GGTACC 1 cut(s) 258
AccB1I GGYRCC 5 cut(s) 258, 1465, 1475, 1770, 3012
AccB7I CCANNNNNTGG 2 cut(s) 1242, 1403
AccI GTMKAC 3 cut(s) 395, 1736, 2119
AccII CGCG 3 cut(s) 1076, 1784, 2219
AccIII TCCGGA 1 cut(s) 1501
AclWI GGATC 9 cut(s) 274, 578, 624, 861, 881, 1366, 1673, 1686, 2594
AcoI YGGCCR 1 cut(s) 1291
AcuI CTGAAG 3 cut(s) 402, 1256, 2592
AdeI CACNNNGTG 1 cut(s) 1472
AfiI CCNNNNNNNGG 6 cut(s) 288, 593, 896, 1242, 1403, 1758
AflII CTTAAG 1 cut(s) 359
AflIII ACRYGT 2 cut(s) 57, 1074
AgsI TTSAA 6 cut(s) 1429, 1667, 1813, 2266, 2315, 2443
AhdI GACNNNNNGTC 1 cut(s) 2844
AhlI ACTAGT 1 cut(s) 811
AjnI CCWGG 7 cut(s) 529, 973, 1302, 1449, 2200, 2307, 2859
AloI GAACNNNNNNTCC 2 cut(s) 1216, 1248
Alw21I GWGCWC 1 cut(s) 1391
Alw26I GTCTC 5 cut(s) 717, 802, 1587, 2508, 2655
AlwI GGATC 9 cut(s) 274, 578, 624, 861, 881, 1366, 1673, 1686, 2594
AlwNI CAGNNNCTG 2 cut(s) 1725, 2842
Ama87I CYCGRG 4 cut(s) 203, 2463, 2831, 2914
Aor13HI TCCGGA 1 cut(s) 1501
AoxI GGCC 6 cut(s) 829, 1291, 1447, 1727, 2059, 2176
ApeKI GCWGC 4 cut(s) 144, 428, 903, 2853
Asp718I GGTACC 1 cut(s) 258
AspLEI GCGC 1 cut(s) 2439
AspS9I GGNCC 6 cut(s) 757, 829, 1394, 1447, 1728, 2177
AsuC2I CCSGG 7 cut(s) 755, 1732, 2464, 2465, 2749, 2915, 2916
AsuHPI GGTGA 7 cut(s) 16, 179, 670, 736, 1418, 2474, 2930
AsuII TTCGAA 2 cut(s) 198, 504
AvaI CYCGRG 4 cut(s) 203, 2463, 2831, 2914
AvaII GGWCC 2 cut(s) 757, 1394
BaeGI GKGCMC 1 cut(s) 3017
BaeI ACNNNNGTAYC 2 cut(s) 162, 195
BamHI GGATCC 1 cut(s) 1678
BanI GGYRCC 5 cut(s) 258, 1465, 1475, 1770, 3012
BanII GRGCYC 1 cut(s) 2895
BarI GAAGNNNNNNTAC 2 cut(s) 3019, 3051
BbsI GAAGAC 4 cut(s) 354, 1660, 2771, 2916
Bbv12I GWGCWC 1 cut(s) 1391
BbvI GCAGC 4 cut(s) 156, 415, 915, 2840
BccI CCATC 6 cut(s) 890, 1135, 1956, 2663, 3089, 3089
BcgI CGANNNNNNTGC 2 cut(s) 1972, 2006
BciT130I CCWGG 7 cut(s) 531, 975, 1304, 1451, 2202, 2309, 2861
BciVI GTATCC 1 cut(s) 1498
BclI TGATCA 2 cut(s) 160, 1596
BcnI CCSGG 7 cut(s) 755, 1732, 2464, 2465, 2749, 2915, 2916
BcoDI GTCTC 5 cut(s) 717, 802, 1587, 2508, 2655
BcuI ACTAGT 1 cut(s) 811
BfaI CTAG 7 cut(s) 812, 891, 2493, 2583, 2783, 2954, 3021
BfmI CTRYAG 8 cut(s) 174, 717, 1420, 1546, 1565, 1710, 1717, 2130
BfrI CTTAAG 1 cut(s) 359
BfuAI ACCTGC 1 cut(s) 954
BfuI GTATCC 1 cut(s) 1498
BisI GCNGC 8 cut(s) 145, 311, 429, 904, 1054, 1291, 2170, 2854
BlsI GCNGC 8 cut(s) 146, 312, 430, 905, 1055, 1292, 2171, 2855
BmcAI AGTACT 2 cut(s) 558, 2870
Bme18I GGWCC 2 cut(s) 757, 1394
BmeRI GACNNNNNGTC 1 cut(s) 2844
BmeT110I CYCGRG 4 cut(s) 203, 2463, 2831, 2914
BmgT120I GGNCC 6 cut(s) 757, 829, 1394, 1447, 1728, 2177
BmiI GGNNCC 9 cut(s) 260, 1234, 1467, 1477, 1680, 1692, 1730, 1772, 3014
BmrI ACTGGG 3 cut(s) 603, 1464, 2437
BmsI GCATC 3 cut(s) 310, 361, 1503
BmuI ACTGGG 3 cut(s) 603, 1464, 2437
BpiI GAAGAC 4 cut(s) 354, 1660, 2771, 2916
BpmI CTGGAG 2 cut(s) 1286, 2637
Bpu10I CCTNAGC 1 cut(s) 1385
Bpu14I TTCGAA 2 cut(s) 198, 504
BpuEI CTTGAG 5 cut(s) 425, 1102, 1806, 1909, 3028
BpuMI CCSGG 7 cut(s) 755, 1732, 2464, 2465, 2749, 2915, 2916
BsaBI GATNNNNATC 1 cut(s) 2978
BsaI GGTCTC 1 cut(s) 2508
BsaWI WCCGGW 1 cut(s) 1501
BsaXI ACNNNNNCTCC 2 cut(s) 1216, 1246
Bsc4I CCNNNNNNNGG 6 cut(s) 288, 593, 896, 1242, 1403, 1758
Bse118I RCCGGY 1 cut(s) 374
Bse3DI GCAATG 4 cut(s) 117, 475, 1206, 1615
Bse8I GATNNNNATC 1 cut(s) 2978
BseAI TCCGGA 1 cut(s) 1501
BseBI CCWGG 7 cut(s) 531, 975, 1304, 1451, 2202, 2309, 2861
BseGI GGATG 3 cut(s) 376, 1264, 1521
BseJI GATNNNNATC 1 cut(s) 2978
BseLI CCNNNNNNNGG 6 cut(s) 288, 593, 896, 1242, 1403, 1758
BseMI GCAATG 4 cut(s) 117, 475, 1206, 1615
BseMII CTCAG 2 cut(s) 245, 1376
BseRI GAGGAG 3 cut(s) 1211, 1292, 2561
BseSI GKGCMC 1 cut(s) 3017
BseXI GCAGC 4 cut(s) 156, 415, 915, 2840
BsgI GTGCAG 1 cut(s) 1762
Bsh1236I CGCG 3 cut(s) 1076, 1784, 2219
BshFI GGCC 6 cut(s) 831, 1293, 1449, 1729, 2061, 2178
BshNI GGYRCC 5 cut(s) 258, 1465, 1475, 1770, 3012
BsiHKAI GWGCWC 1 cut(s) 1391
BsiHKCI CYCGRG 4 cut(s) 203, 2463, 2831, 2914
BsiSI CCGG 8 cut(s) 375, 755, 995, 1502, 1732, 2464, 2748, 2915
BslFI GGGAC 5 cut(s) 317, 1736, 1774, 2220, 2259
BslI CCNNNNNNNGG 6 cut(s) 288, 593, 896, 1242, 1403, 1758
BsmAI GTCTC 5 cut(s) 717, 802, 1587, 2508, 2655
BsmBI CGTCTC 1 cut(s) 1587
BsmFI GGGAC 5 cut(s) 317, 1736, 1774, 2220, 2259
BsmI GAATGC 1 cut(s) 1151
BsnI GGCC 6 cut(s) 831, 1293, 1449, 1729, 2061, 2178
Bso31I GGTCTC 1 cut(s) 2508
BsoBI CYCGRG 4 cut(s) 203, 2463, 2831, 2914
Bsp119I TTCGAA 2 cut(s) 198, 504
Bsp1286I GDGCHC 3 cut(s) 1391, 2895, 3017
Bsp13I TCCGGA 1 cut(s) 1501
Bsp1407I TGTACA 2 cut(s) 795, 2902
Bsp19I CCATGG 1 cut(s) 262
BspANI GGCC 6 cut(s) 831, 1293, 1449, 1729, 2061, 2178
BspCNI CTCAG 2 cut(s) 244, 1377
BspEI TCCGGA 1 cut(s) 1501
BspFNI CGCG 3 cut(s) 1076, 1784, 2219
BspHI TCATGA 1 cut(s) 856
BspLI GGNNCC 9 cut(s) 260, 1234, 1467, 1477, 1680, 1692, 1730, 1772, 3014
BspMAI CTGCAG 3 cut(s) 721, 1550, 1721
BspMI ACCTGC 1 cut(s) 954
BspPI GGATC 9 cut(s) 274, 578, 624, 861, 881, 1366, 1673, 1686, 2594
BspT104I TTCGAA 2 cut(s) 198, 504
BspT107I GGYRCC 5 cut(s) 258, 1465, 1475, 1770, 3012
BspTI CTTAAG 1 cut(s) 359
BspTNI GGTCTC 1 cut(s) 2508
BsrDI GCAATG 4 cut(s) 117, 475, 1206, 1615
BsrFI RCCGGY 1 cut(s) 374
BsrGI TGTACA 2 cut(s) 795, 2902
BssAI RCCGGY 1 cut(s) 374
BssNAI GTATAC 1 cut(s) 2120
BssT1I CCWWGG 1 cut(s) 262
Bst1107I GTATAC 1 cut(s) 2120
Bst2UI CCWGG 7 cut(s) 531, 975, 1304, 1451, 2202, 2309, 2861
Bst4CI ACNGT 4 cut(s) 283, 1838, 1870, 2027
Bst6I CTCTTC 1 cut(s) 2805
BstAFI CTTAAG 1 cut(s) 359
BstAPI GCANNNNNTGC 1 cut(s) 2842
BstAUI TGTACA 2 cut(s) 795, 2902
BstBI TTCGAA 2 cut(s) 198, 504
BstC8I GCNNGC 3 cut(s) 376, 1853, 3032
BstDEI CTNAG 3 cut(s) 231, 1385, 2254
BstDSI CCRYGG 4 cut(s) 262, 1443, 1782, 1869
BstF5I GGATG 3 cut(s) 376, 1264, 1521
BstFNI CGCG 3 cut(s) 1076, 1784, 2219
BstHHI GCGC 1 cut(s) 2439
BstMAI GTCTC 5 cut(s) 717, 802, 1587, 2508, 2655
BstMWI GCNNNNNNNGC 7 cut(s) 329, 991, 1455, 1535, 1913, 2175, 2842
BstNI CCWGG 7 cut(s) 531, 975, 1304, 1451, 2202, 2309, 2861
BstNSI RCATGY 4 cut(s) 61, 733, 921, 1242
BstSFI CTRYAG 8 cut(s) 174, 717, 1420, 1546, 1565, 1710, 1717, 2130
BstSLI GKGCMC 1 cut(s) 3017
BstUI CGCG 3 cut(s) 1076, 1784, 2219
BstV1I GCAGC 4 cut(s) 156, 415, 915, 2840
BstV2I GAAGAC 4 cut(s) 354, 1660, 2771, 2916
BstX2I RGATCY 3 cut(s) 886, 1678, 2586
BstYI RGATCY 3 cut(s) 886, 1678, 2586
BstZ17I GTATAC 1 cut(s) 2120
BsuI GTATCC 1 cut(s) 1498
BsuRI GGCC 6 cut(s) 831, 1293, 1449, 1729, 2061, 2178
BtgI CCRYGG 4 cut(s) 262, 1443, 1782, 1869
BtsCI GGATG 3 cut(s) 376, 1264, 1521
BtsI GCAGTG 2 cut(s) 2840, 2965
BtsIMutI CAGTG 7 cut(s) 1181, 1389, 1477, 2032, 2737, 2840, 2965
BveI ACCTGC 1 cut(s) 954
Cac8I GCNNGC 3 cut(s) 376, 1853, 3032
CaiI CAGNNNCTG 2 cut(s) 1725, 2842
CciI TCATGA 1 cut(s) 856
CfoI GCGC 1 cut(s) 2439
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 6 cut(s) 757, 829, 1394, 1447, 1728, 2177
Cfr42I CCGCGG 1 cut(s) 1785
Cfr9I CCCGGG 2 cut(s) 2463, 2914
CpoI CGGWCCG 1 cut(s) 757
CseI GACGC 2 cut(s) 1082, 2834
CsiI ACCWGGT 2 cut(s) 973, 2307
CspI CGGWCCG 1 cut(s) 757
DdeI CTNAG 3 cut(s) 231, 1385, 2254
DraI TTTAAA 3 cut(s) 1089, 1648, 2068
DraIII CACNNNGTG 1 cut(s) 1472
DriI GACNNNNNGTC 1 cut(s) 2844
EaeI YGGCCR 1 cut(s) 1291
Eam1104I CTCTTC 1 cut(s) 2805
Eam1105I GACNNNNNGTC 1 cut(s) 2844
EarI CTCTTC 1 cut(s) 2805
EciI GGCGGA 1 cut(s) 1671
Eco130I CCWWGG 1 cut(s) 262
Eco24I GRGCYC 1 cut(s) 2895
Eco31I GGTCTC 1 cut(s) 2508
Eco47I GGWCC 2 cut(s) 757, 1394
Eco57I CTGAAG 3 cut(s) 402, 1256, 2592
Eco88I CYCGRG 4 cut(s) 203, 2463, 2831, 2914
EcoRI GAATTC 4 cut(s) 486, 1625, 2002, 2261
EcoRII CCWGG 7 cut(s) 529, 973, 1302, 1449, 2200, 2307, 2859
EcoT14I CCWWGG 1 cut(s) 262
EcoT22I ATGCAT 2 cut(s) 2665, 2794
EcoT38I GRGCYC 1 cut(s) 2895
ErhI CCWWGG 1 cut(s) 262
Esp3I CGTCTC 1 cut(s) 1587
FaqI GGGAC 5 cut(s) 317, 1736, 1774, 2220, 2259
FauI CCCGC 2 cut(s) 3001, 3039
FauNDI CATATG 1 cut(s) 2638
FbaI TGATCA 2 cut(s) 160, 1596
FblI GTMKAC 3 cut(s) 395, 1736, 2119
Fnu4HI GCNGC 8 cut(s) 145, 311, 429, 904, 1054, 1291, 2170, 2854
FokI GGATG 3 cut(s) 383, 1271, 1508
FriOI GRGCYC 1 cut(s) 2895
Fsp4HI GCNGC 8 cut(s) 145, 311, 429, 904, 1054, 1291, 2170, 2854
FspBI CTAG 7 cut(s) 812, 891, 2493, 2583, 2783, 2954, 3021
GlaI GCGC 1 cut(s) 2438
GluI GCNGC 8 cut(s) 145, 311, 429, 904, 1054, 1291, 2170, 2854
GsuI CTGGAG 2 cut(s) 1286, 2637
HaeIII GGCC 6 cut(s) 831, 1293, 1449, 1729, 2061, 2178
HapII CCGG 8 cut(s) 375, 755, 995, 1502, 1732, 2464, 2748, 2915
HgaI GACGC 2 cut(s) 1082, 2834
HhaI GCGC 1 cut(s) 2439
Hin6I GCGC 1 cut(s) 2437
HinP1I GCGC 1 cut(s) 2437
HincII GTYRAC 3 cut(s) 1204, 2884, 3078
HindII GTYRAC 3 cut(s) 1204, 2884, 3078
HindIII AAGCTT 3 cut(s) 1182, 2195, 2380
HpaI GTTAAC 1 cut(s) 3078
HpaII CCGG 8 cut(s) 375, 755, 995, 1502, 1732, 2464, 2748, 2915
HphI GGTGA 7 cut(s) 16, 179, 670, 736, 1418, 2474, 2930
Hpy166II GTNNAC 8 cut(s) 396, 1204, 1737, 2120, 2185, 2884, 2903, 3078
Hpy8I GTNNAC 8 cut(s) 396, 1204, 1737, 2120, 2185, 2884, 2903, 3078
Hpy99I CGWCG 2 cut(s) 1076, 1860
HpyAV CCTTC 9 cut(s) 856, 1093, 1209, 1942, 1973, 2078, 2809, 3027, 3045
HpyCH4III ACNGT 4 cut(s) 283, 1838, 1870, 2027
HpyCH4IV ACGT 2 cut(s) 785, 2886
HpyF10VI GCNNNNNNNGC 7 cut(s) 329, 991, 1455, 1535, 1913, 2175, 2842
HpyF3I CTNAG 3 cut(s) 231, 1385, 2254
HpySE526I ACGT 2 cut(s) 785, 2886
HspAI GCGC 1 cut(s) 2437
Kpn2I TCCGGA 1 cut(s) 1501
KpnI GGTACC 1 cut(s) 262
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
Ksp22I TGATCA 2 cut(s) 160, 1596
KspAI GTTAAC 1 cut(s) 3078
KspI CCGCGG 1 cut(s) 1785
Lsp1109I GCAGC 4 cut(s) 156, 415, 915, 2840
LweI GCATC 3 cut(s) 310, 361, 1503
MabI ACCWGGT 2 cut(s) 973, 2307
MaeI CTAG 7 cut(s) 812, 891, 2493, 2583, 2783, 2954, 3021
MaeII ACGT 2 cut(s) 785, 2886
MaeIII GTNAC 5 cut(s) 1486, 1742, 1832, 1888, 2934
MflI RGATCY 3 cut(s) 886, 1678, 2586
MhlI GDGCHC 3 cut(s) 1391, 2895, 3017
MluI ACGCGT 1 cut(s) 1074
MlyI GAGTC 3 cut(s) 437, 2381, 2785
MmeI TCCRAC 4 cut(s) 229, 536, 2320, 2611
Mph1103I ATGCAT 2 cut(s) 2665, 2794
MroI TCCGGA 1 cut(s) 1501
MroNI GCCGGC 1 cut(s) 374
MslI CAYNNNNRTG 2 cut(s) 539, 2019
MspA1I CMGCKG 3 cut(s) 1025, 1290, 1784
MspCI CTTAAG 1 cut(s) 359
MspI CCGG 8 cut(s) 375, 755, 995, 1502, 1732, 2464, 2748, 2915
Mva1269I GAATGC 1 cut(s) 1151
MvaI CCWGG 7 cut(s) 531, 975, 1304, 1451, 2202, 2309, 2861
MvnI CGCG 3 cut(s) 1076, 1784, 2219
MwoI GCNNNNNNNGC 7 cut(s) 329, 991, 1455, 1535, 1913, 2175, 2842
NaeI GCCGGC 1 cut(s) 376
NciI CCSGG 7 cut(s) 755, 1732, 2464, 2465, 2749, 2915, 2916
NcoI CCATGG 1 cut(s) 262
NdeI CATATG 1 cut(s) 2638
NgoMIV GCCGGC 1 cut(s) 374
NlaIV GGNNCC 9 cut(s) 260, 1234, 1467, 1477, 1680, 1692, 1730, 1772, 3014
NmuCI GTSAC 2 cut(s) 1486, 2934
NsiI ATGCAT 2 cut(s) 2665, 2794
NspI RCATGY 4 cut(s) 61, 733, 921, 1242
NspV TTCGAA 2 cut(s) 198, 504
PaeR7I CTCGAG 1 cut(s) 2831
PagI TCATGA 1 cut(s) 856
PaqCI CACCTGC 1 cut(s) 954
PciI ACATGT 1 cut(s) 57
PcsI WCGNNNNNNNCGW 1 cut(s) 2598
PctI GAATGC 1 cut(s) 1151
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 8 cut(s) 271, 451, 1115, 1331, 2054, 2489, 2554, 2974
PflMI CCANNNNNTGG 2 cut(s) 1242, 1403
PkrI GCNGC 8 cut(s) 146, 312, 430, 905, 1055, 1292, 2171, 2855
PleI GAGTC 3 cut(s) 437, 2381, 2784
PpsI GAGTC 3 cut(s) 437, 2381, 2784
PscI ACATGT 1 cut(s) 57
Psp6I CCWGG 7 cut(s) 529, 973, 1302, 1449, 2200, 2307, 2859
PspGI CCWGG 7 cut(s) 529, 973, 1302, 1449, 2200, 2307, 2859
PspN4I GGNNCC 9 cut(s) 260, 1234, 1467, 1477, 1680, 1692, 1730, 1772, 3014
PspPI GGNCC 6 cut(s) 757, 829, 1394, 1447, 1728, 2177
PspXI VCTCGAGB 1 cut(s) 2831
PstI CTGCAG 3 cut(s) 721, 1550, 1721
PstNI CAGNNNCTG 2 cut(s) 1725, 2842
PsuI RGATCY 3 cut(s) 886, 1678, 2586
PvuII CAGCTG 1 cut(s) 1025
RseI CAYNNNNRTG 2 cut(s) 539, 2019
Rsr2I CGGWCCG 1 cut(s) 757
RsrII CGGWCCG 1 cut(s) 757
SacII CCGCGG 1 cut(s) 1785
SatI GCNGC 8 cut(s) 145, 311, 429, 904, 1054, 1291, 2170, 2854
Sau96I GGNCC 6 cut(s) 757, 829, 1394, 1447, 1728, 2177
ScaI AGTACT 2 cut(s) 558, 2870
SchI GAGTC 3 cut(s) 437, 2381, 2785
SduI GDGCHC 3 cut(s) 1391, 2895, 3017
SexAI ACCWGGT 2 cut(s) 973, 2307
SfaNI GCATC 3 cut(s) 310, 361, 1503
SfcI CTRYAG 8 cut(s) 174, 717, 1420, 1546, 1565, 1710, 1717, 2130
Sfr274I CTCGAG 1 cut(s) 2831
Sfr303I CCGCGG 1 cut(s) 1785
SfuI TTCGAA 2 cut(s) 198, 504
SgrBI CCGCGG 1 cut(s) 1785
SinI GGWCC 2 cut(s) 757, 1394
SlaI CTCGAG 1 cut(s) 2831
SmaI CCCGGG 2 cut(s) 2465, 2916
SmiMI CAYNNNNRTG 2 cut(s) 539, 2019
SmlI CTYRAG 7 cut(s) 359, 404, 1081, 1821, 1924, 2831, 3043
SmoI CTYRAG 7 cut(s) 359, 404, 1081, 1821, 1924, 2831, 3043
SpeI ACTAGT 1 cut(s) 811
SspMI CTAG 7 cut(s) 812, 891, 2493, 2583, 2783, 2954, 3021
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 4 cut(s) 283, 1838, 1870, 2027
TaiI ACGT 2 cut(s) 788, 2889
TaqII GACCGA 1 cut(s) 1982
TatI WGTACW 6 cut(s) 387, 556, 795, 1817, 2868, 2902
TauI GCSGC 4 cut(s) 313, 1056, 1293, 2172
TfiI GAWTC 8 cut(s) 271, 451, 1115, 1331, 2054, 2489, 2554, 2974
TscAI CASTG 7 cut(s) 1181, 1396, 1477, 2032, 2737, 2847, 2965
TseFI GTSAC 2 cut(s) 1486, 2934
TseI GCWGC 4 cut(s) 144, 428, 903, 2853
Tsp45I GTSAC 2 cut(s) 1486, 2934
TspGWI ACGGA 2 cut(s) 366, 749
TspMI CCCGGG 2 cut(s) 2463, 2914
TspRI CASTG 7 cut(s) 1181, 1396, 1477, 2032, 2737, 2847, 2965
Van91I CCANNNNNTGG 2 cut(s) 1242, 1403
Vha464I CTTAAG 1 cut(s) 359
VpaK11BI GGWCC 2 cut(s) 757, 1394
XbaI TCTAGA 1 cut(s) 3020
XceI RCATGY 4 cut(s) 61, 733, 921, 1242
XcmI CCANNNNNNNNNTGG 1 cut(s) 1138
XhoI CTCGAG 1 cut(s) 2831
XmaI CCCGGG 2 cut(s) 2463, 2914
XmiI GTMKAC 3 cut(s) 395, 1736, 2119
XspI CTAG 7 cut(s) 812, 891, 2493, 2583, 2783, 2954, 3021
ZrmI AGTACT 2 cut(s) 558, 2870
Zsp2I ATGCAT 2 cut(s) 2665, 2794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.