pycom02g23070

serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
21206153 .. 21207305
1153 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g23070.2

Sequence Viewer

Length: 1065 bp
ATGATGTTTCTCAGAGGGAGGTTAACAACATCAAATTACGTCATTGCACGGTTTGCGAATCGCATGCTGTTTTCCATCTTCGTTTCGTATGCAGTAGCAGTCTTGTTGTGCTCATCTCACCCATTTTACTGTGCTAGAGATACAATAACACACGACACTCCAATTACCGACGATGTTGAATCAGAAACTCTTGTTTCATCTGGAGGAAGATTTGAACTCGGATTCTTTAGCCCTTCACCTCAAGGGACTCAGAGATATGTTGGCATATGGTATCACCAACTGAGTCCGAGGACAGTGGTATGGATTGCCAACAGAGAAAACCCAGTCCTCAACTCCACGCGTACCGGATTTCTTGCACTCCAAGATGGTAACCTCCATGTGTTGGATACTGCTGGAAAAAGTTACTGGTCAACGGAGGTTGAAACATCCAATTCTTTAACCAGTACTGGGGATGATAAGTTGGCAGTGAATTTTTTGTGGCAGAGCTTTCAAAGTCCAACCGATACATTCATTCCTGGGATGGAAATTGATAAAAGCTTGGAGTTGACTTCGTGGAGAGGCGAAGATGACCCAGCAAGCGGGAAATTCATCTTCAAACAAGATCAAGTTGGAGAGAACCAGTATGTCATCTCAAAATCAAAATCGATTCTGTACTTGACAAGCGGAGAACGGGCAAGTGATACATTTTTCAGCTCCGATCAAATTCTTCCTGCTGTTATTTACTTACTATCAAATTTTAGCAAGAAATATGTTGTTAGAAATTCCCCCAAGATTTTCAGTTCTCCGAGTCCAAACTCCACTTATAGAAACATAGGAATTCCTCCACGATCAGAATACAATTATACAAGGTTGGTGATTAGTATTACTGGAGAGATACAGTTTCTGACGTGGATTGATTCCACAAAGCAGTGCAATTTGTATTGGTCGGCGCCAAGAGATAACTGCGGTGTGTTTAATGCTTGCGGCAACTTTGGTAGCTGCAATGATAATAATATTCCGTTTCTGCGCAAATGTTTGCCTGGTTTCAAACCCCAGTATCTACAACAAATGCTACAAACACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

355

Amino Acids

39.96

Weight (kDa)

6.89

Isoelectric Point (pI)

39.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1007
AccB1I GGYRCC 1 cut(s) 928
AccB7I CCANNNNNTGG 1 cut(s) 382
AccII CGCG 1 cut(s) 340
AciI CCGC 4 cut(s) 579, 663, 945, 963
AcsI RAATTY 6 cut(s) 469, 584, 702, 733, 760, 816
AcyI GRCGYC 1 cut(s) 929
AfaI GTAC 3 cut(s) 343, 445, 653
AfiI CCNNNNNNNGG 3 cut(s) 382, 447, 578
AflIII ACRYGT 1 cut(s) 338
AgsI TTSAA 6 cut(s) 179, 215, 422, 491, 595, 1027
AjiI CACGTC 1 cut(s) 888
AjnI CCWGG 2 cut(s) 514, 1018
AluBI AGCT 4 cut(s) 486, 537, 693, 978
AluI AGCT 4 cut(s) 486, 537, 693, 978
Alw21I GWGCWC 1 cut(s) 113
AlwNI CAGNNNCTG 1 cut(s) 883
ApeKI GCWGC 1 cut(s) 978
ApoI RAATTY 6 cut(s) 469, 584, 702, 733, 760, 816
AspLEI GCGC 2 cut(s) 931, 1008
AsuHPI GGTGA 4 cut(s) 110, 228, 266, 865
BaeI ACNNNNGTAYC 2 cut(s) 1019, 1052
BanI GGYRCC 1 cut(s) 928
Bbv12I GWGCWC 1 cut(s) 113
BbvI GCAGC 1 cut(s) 965
BccI CCATC 3 cut(s) 83, 359, 514
BcgI CGANNNNNNTGC 2 cut(s) 46, 80
BciT130I CCWGG 2 cut(s) 516, 1020
BciVI GTATCC 1 cut(s) 379
BfaI CTAG 1 cut(s) 135
BfmI CTRYAG 1 cut(s) 1061
BfoI RGCGCY 1 cut(s) 932
BfuI GTATCC 1 cut(s) 379
BisI GCNGC 2 cut(s) 964, 979
BlsI GCNGC 2 cut(s) 965, 980
BmcAI AGTACT 1 cut(s) 445
Bme1390I CCNGG 2 cut(s) 516, 1020
BmgBI CACGTC 1 cut(s) 888
BmiI GGNNCC 1 cut(s) 930
BmrFI CCNGG 2 cut(s) 516, 1020
BmrI ACTGGG 3 cut(s) 317, 456, 1027
BmuI ACTGGG 3 cut(s) 317, 456, 1027
BpmI CTGGAG 2 cut(s) 222, 888
BpuEI CTTGAG 1 cut(s) 225
Bsa29I ATCGAT 1 cut(s) 644
BsaHI GRCGYC 1 cut(s) 929
BsaJI CCNNGG 2 cut(s) 287, 515
BsaWI WCCGGW 1 cut(s) 344
Bsc4I CCNNNNNNNGG 3 cut(s) 382, 447, 578
Bse1I ACTGG 7 cut(s) 323, 410, 441, 451, 619, 871, 1033
Bse3DI GCAATG 2 cut(s) 42, 988
BseBI CCWGG 2 cut(s) 516, 1020
BseCI ATCGAT 1 cut(s) 644
BseDI CCNNGG 2 cut(s) 287, 515
BseGI GGATG 3 cut(s) 425, 457, 525
BseLI CCNNNNNNNGG 3 cut(s) 382, 447, 578
BseMI GCAATG 2 cut(s) 42, 988
BseMII CTCAG 3 cut(s) 25, 263, 272
BseNI ACTGG 7 cut(s) 323, 410, 441, 451, 619, 871, 1033
BseXI GCAGC 1 cut(s) 965
BseYI CCCAGC 1 cut(s) 571
Bsh1236I CGCG 1 cut(s) 340
BshNI GGYRCC 1 cut(s) 928
BshVI ATCGAT 1 cut(s) 644
BsiHKAI GWGCWC 1 cut(s) 113
BsiSI CCGG 1 cut(s) 345
BslFI GGGAC 1 cut(s) 259
BslI CCNNNNNNNGG 3 cut(s) 382, 447, 578
BsmFI GGGAC 1 cut(s) 259
Bsp1286I GDGCHC 1 cut(s) 113
Bsp143I GATC 3 cut(s) 601, 697, 827
BspACI CCGC 4 cut(s) 579, 663, 945, 963
BspCNI CTCAG 3 cut(s) 24, 262, 273
BspDI ATCGAT 1 cut(s) 644
BspFNI CGCG 1 cut(s) 340
BspLI GGNNCC 1 cut(s) 930
BspT107I GGYRCC 1 cut(s) 928
BsrDI GCAATG 2 cut(s) 42, 988
BsrI ACTGG 7 cut(s) 323, 410, 441, 451, 619, 871, 1033
BssECI CCNNGG 2 cut(s) 287, 515
BssMI GATC 3 cut(s) 601, 697, 827
BssNI GRCGYC 1 cut(s) 929
Bst2UI CCWGG 2 cut(s) 516, 1020
Bst4CI ACNGT 4 cut(s) 51, 131, 295, 879
BstACI GRCGYC 1 cut(s) 929
BstAPI GCANNNNNTGC 1 cut(s) 53
BstC8I GCNNGC 3 cut(s) 65, 577, 961
BstDEI CTNAG 3 cut(s) 11, 249, 281
BstEII GGTNACC 1 cut(s) 368
BstF5I GGATG 3 cut(s) 425, 457, 525
BstFNI CGCG 1 cut(s) 340
BstH2I RGCGCY 1 cut(s) 932
BstHHI GCGC 2 cut(s) 931, 1008
BstKTI GATC 3 cut(s) 604, 700, 830
BstMBI GATC 3 cut(s) 601, 697, 827
BstMWI GCNNNNNNNGC 1 cut(s) 53
BstNI CCWGG 2 cut(s) 516, 1020
BstNSI RCATGY 1 cut(s) 67
BstPI GGTNACC 1 cut(s) 368
BstSCI CCNGG 2 cut(s) 514, 1018
BstSFI CTRYAG 1 cut(s) 1061
BstUI CGCG 1 cut(s) 340
BstV1I GCAGC 1 cut(s) 965
Bsu15I ATCGAT 1 cut(s) 644
BsuI GTATCC 1 cut(s) 379
BsuTUI ATCGAT 1 cut(s) 644
BtrI CACGTC 1 cut(s) 888
BtsCI GGATG 3 cut(s) 425, 457, 525
BtsI GCAGTG 2 cut(s) 471, 914
BtsIMutI CAGTG 3 cut(s) 300, 471, 914
Cac8I GCNNGC 3 cut(s) 65, 577, 961
CaiI CAGNNNCTG 1 cut(s) 883
CfoI GCGC 2 cut(s) 931, 1008
ClaI ATCGAT 1 cut(s) 644
Csp6I GTAC 3 cut(s) 342, 444, 652
CviAII CATG 2 cut(s) 64, 377
CviJI RGCY 5 cut(s) 231, 486, 537, 693, 978
CviKI_1 RGCY 5 cut(s) 231, 486, 537, 693, 978
CviQI GTAC 3 cut(s) 342, 444, 652
DdeI CTNAG 3 cut(s) 11, 249, 281
DinI GGCGCC 1 cut(s) 930
DpnI GATC 3 cut(s) 603, 699, 829
DpnII GATC 3 cut(s) 601, 697, 827
Eco91I GGTNACC 1 cut(s) 368
EcoO65I GGTNACC 1 cut(s) 368
EcoRI GAATTC 1 cut(s) 816
EcoRII CCWGG 2 cut(s) 514, 1018
EgeI GGCGCC 1 cut(s) 930
EheI GGCGCC 1 cut(s) 930
FaeI CATG 2 cut(s) 67, 380
FaqI GGGAC 1 cut(s) 259
FatI CATG 2 cut(s) 63, 376
FauI CCCGC 1 cut(s) 572
FauNDI CATATG 1 cut(s) 266
Fnu4HI GCNGC 2 cut(s) 964, 979
FokI GGATG 3 cut(s) 412, 464, 532
Fsp4HI GCNGC 2 cut(s) 964, 979
FspBI CTAG 1 cut(s) 135
FspI TGCGCA 1 cut(s) 1007
GlaI GCGC 2 cut(s) 930, 1007
GluI GCNGC 2 cut(s) 964, 979
GsaI CCCAGC 1 cut(s) 575
GsuI CTGGAG 2 cut(s) 222, 888
HaeII RGCGCY 1 cut(s) 932
HapII CCGG 1 cut(s) 345
HhaI GCGC 2 cut(s) 931, 1008
Hin1I GRCGYC 1 cut(s) 929
Hin1II CATG 2 cut(s) 67, 380
Hin6I GCGC 2 cut(s) 929, 1006
HinP1I GCGC 2 cut(s) 929, 1006
HincII GTYRAC 3 cut(s) 24, 411, 546
HindII GTYRAC 3 cut(s) 24, 411, 546
HindIII AAGCTT 1 cut(s) 535
HinfI GANTC 8 cut(s) 58, 179, 222, 247, 283, 646, 787, 896
HpaI GTTAAC 1 cut(s) 24
HpaII CCGG 1 cut(s) 345
HphI GGTGA 4 cut(s) 110, 228, 266, 865
Hpy166II GTNNAC 3 cut(s) 24, 411, 546
Hpy188I TCNGA 9 cut(s) 14, 184, 221, 252, 288, 697, 786, 832, 885
Hpy188III TCNNGA 1 cut(s) 201
Hpy8I GTNNAC 3 cut(s) 24, 411, 546
Hpy99I CGWCG 1 cut(s) 173
HpyAV CCTTC 1 cut(s) 243
HpyCH4III ACNGT 4 cut(s) 51, 131, 295, 879
HpyCH4IV ACGT 2 cut(s) 39, 887
HpyCH4V TGCA 5 cut(s) 47, 92, 356, 912, 981
HpyF10VI GCNNNNNNNGC 1 cut(s) 53
HpyF3I CTNAG 3 cut(s) 11, 249, 281
HpySE526I ACGT 2 cut(s) 39, 887
Hsp92I GRCGYC 1 cut(s) 929
Hsp92II CATG 2 cut(s) 67, 380
HspAI GCGC 2 cut(s) 929, 1006
KasI GGCGCC 1 cut(s) 928
KspAI GTTAAC 1 cut(s) 24
Kzo9I GATC 3 cut(s) 601, 697, 827
LmnI GCTCC 1 cut(s) 698
Lsp1109I GCAGC 1 cut(s) 965
MaeI CTAG 1 cut(s) 135
MaeII ACGT 2 cut(s) 39, 887
MaeIII GTNAC 2 cut(s) 368, 401
MalI GATC 3 cut(s) 603, 699, 829
MboI GATC 3 cut(s) 601, 697, 827
MboII GAAGA 5 cut(s) 70, 219, 575, 583, 698
MhlI GDGCHC 1 cut(s) 113
MluI ACGCGT 1 cut(s) 338
Mly113I GGCGCC 1 cut(s) 929
MlyI GAGTC 3 cut(s) 241, 292, 796
MmeI TCCRAC 3 cut(s) 363, 521, 589
MseI TTAA 3 cut(s) 23, 437, 954
MspI CCGG 1 cut(s) 345
MspR9I CCNGG 2 cut(s) 516, 1020
MvaI CCWGG 2 cut(s) 516, 1020
MvnI CGCG 1 cut(s) 340
MwoI GCNNNNNNNGC 1 cut(s) 53
NarI GGCGCC 1 cut(s) 929
NdeI CATATG 1 cut(s) 266
NdeII GATC 3 cut(s) 601, 697, 827
NlaIII CATG 2 cut(s) 67, 380
NlaIV GGNNCC 1 cut(s) 930
NsbI TGCGCA 1 cut(s) 1007
NspI RCATGY 1 cut(s) 67
PaeI GCATGC 1 cut(s) 67
PfeI GAWTC 5 cut(s) 58, 179, 222, 646, 896
PflMI CCANNNNNTGG 1 cut(s) 382
PkrI GCNGC 2 cut(s) 965, 980
PleI GAGTC 3 cut(s) 241, 291, 795
PluTI GGCGCC 1 cut(s) 932
PpsI GAGTC 3 cut(s) 241, 291, 795
Psp6I CCWGG 2 cut(s) 514, 1018
PspEI GGTNACC 1 cut(s) 368
PspFI CCCAGC 1 cut(s) 571
PspGI CCWGG 2 cut(s) 514, 1018
PspN4I GGNNCC 1 cut(s) 930
PstNI CAGNNNCTG 1 cut(s) 883
RsaI GTAC 3 cut(s) 343, 445, 653
RsaNI GTAC 3 cut(s) 342, 444, 652
SaqAI TTAA 3 cut(s) 23, 437, 954
SatI GCNGC 2 cut(s) 964, 979
Sau3AI GATC 3 cut(s) 601, 697, 827
ScaI AGTACT 1 cut(s) 445
SchI GAGTC 3 cut(s) 241, 292, 796
ScrFI CCNGG 2 cut(s) 516, 1020
SduI GDGCHC 1 cut(s) 113
SfcI CTRYAG 1 cut(s) 1061
SfoI GGCGCC 1 cut(s) 930
SmlI CTYRAG 1 cut(s) 240
SmoI CTYRAG 1 cut(s) 240
SphI GCATGC 1 cut(s) 67
SsiI CCGC 4 cut(s) 579, 663, 945, 963
SspDI GGCGCC 1 cut(s) 928
SspI AATATT 1 cut(s) 994
SspMI CTAG 1 cut(s) 135
StyD4I CCNGG 2 cut(s) 514, 1018
TaaI ACNGT 4 cut(s) 51, 131, 295, 879
TaiI ACGT 2 cut(s) 42, 890
TaqI TCGA 1 cut(s) 644
TatI WGTACW 2 cut(s) 443, 651
TauI GCSGC 1 cut(s) 966
TfiI GAWTC 5 cut(s) 58, 179, 222, 646, 896
Tru1I TTAA 3 cut(s) 23, 437, 954
Tru9I TTAA 3 cut(s) 23, 437, 954
TscAI CASTG 3 cut(s) 300, 471, 914
TseI GCWGC 1 cut(s) 978
TspDTI ATGAA 3 cut(s) 186, 499, 577
TspGWI ACGGA 2 cut(s) 428, 987
TspRI CASTG 3 cut(s) 300, 471, 914
Van91I CCANNNNNTGG 1 cut(s) 382
XapI RAATTY 6 cut(s) 469, 584, 702, 733, 760, 816
XceI RCATGY 1 cut(s) 67
XspI CTAG 1 cut(s) 135
ZrmI AGTACT 1 cut(s) 445
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.