Rh2DG575600

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000412
Physical Location & Seq
Reverse (-)
80581694 .. 80597892
16199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG575600.1

Sequence Viewer

Length: 1761 bp
ATGAAGTTTATCCGAAGAACAAAGATAACAAAAGCAAATGGTATTATTATATGCTTTGCAAATGGGATGCTATCTTCCATCTTCTTATCATATGCACTCTTCTTGTGCTTTTCTCACCCCTTCAGCTCTGCTAGAGATACAATAACCAAAGATAATCCAATTAAAGATGATGGATCAGAAGGTCTTGTTTCAGCTGGAGGAAAATTTGAACTGGGATTCTTTCCCCTACATGGAAGAGGAATCTCAGGCAGTTACAGAAGATATGTTGGCATATGGTATCACAAACTGATTCCAAGGACAGTTATATGGGTTGCCAACAGAGACGATCCACTGCTTGCCAATCACACTGGAGTTCTTGCAATCAAACAGGGTACCCTCCAAGTGTTGGATATAACTTCTAGAAAGTCTTTATGGTCGGCAGAGATCAAAGTAATACAGTCTTTCAATCGGACAGTGAAACTCAAGGATGATGGGAACTTGGTGTTAAGTGATACTGATGCACATTTGGCAGCAGTTATGTGGCAAAGCTTTGAAAATCCTACTGATACATTCATTCCTGGGATGATAATGGATAAAAACTTAAATCTGACTTCATGGAACGACAAAGATGACCCAAGAACCGGGAACTTTACCTTTAAAGTAGATGAAGACAACCAGTATATCATCAAGAATTCAGCTGCAGATTACTGGAGAAGTAGAGCACCAAATGGTAATTCTTTCAGCTCAGATGAAATGCCTGCTGCAGTTGCTTGGTTACTATCAAATTTCAGCGAGAGTCATTCATCACAAAGTTCCAGCCAAATTTTCAATGCTTCGGGGTCACACTCTTACAATGAGACAAAAATCCTGCCACGATCAGGGTACAATTATACAAGATTGGTAATAGATTTTACTGGAAAGCTGAACTTTCTTGTGTACACTCACAACTGGAGCTCGACATGGAGTGAGCCAAGTGATTATTGCAGTGTGTTTAACCGTTGTGGGGACTTCGGTGTCTGCAATAGTACTAATAAGCCAATCTGTCGATGTTTGCGAGGTTTCAAGCCCCAGCTTCGAAAGAACTGGAACTCTGGAGATTTTTCAGGTGGATGCTTAAGAGAGTCCACATTATGTGCTAACAGGAATGATACGTTCTTCAGTTTGAAGGTCAAGAAAGCGCCAAATCCAGACCCACAGACCTATGTTGCCAATGAAACAGATTGCAGGAACATATGCTTGAAAAAGTGCGAATGCCAGGCTTACTCATTAGCCAAAAACAGAAATCGGTACACTACCACGTGTTTAATATGGGCTTCGACGGTCCTAAGTAATCTTGAAGAGTCTTCTTCTGGCCAGAACCTCTATGCTCGCATTGCCGGGTCTGATTTAGAAGGAAATCATCAAGAGCCAACTAAACCGTCATTGGAAGATCATTCAAGAAGAAAAATTCCATTGTTTCTGATAGTTGTTGCAGTGCTTGTAAGCGTTTTTTTGGCATGCATCATTTCTATTTTTATATGGAGAAGAAACATGATCAAGAGACGAGACATTGGAACATCTTCGTCTTCTAACATGATTGTGAAGATAATGGAGTCTGGAAACCTGGTGTTAAGGGATACTGGTGAGTTGACAGCGGATCCTTTGTGGCAGATCTTTCAAAATCCAACTGATACATTCATTCCTGGGATGTTAATGGATAGTAACTTGGGGTTGACTTCATGGAGCGACGAAGATGACCCAAGAACTGGGAACTTCACCTTCAAACTAGATCAACAAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

586

Amino Acids

65.95

Weight (kDa)

8.6

Isoelectric Point (pI)

30.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 100 - 195 1.8e-22 D-mannose binding lectin
S_locus_glycop PF00954 270 - 350 4.1e-17 S-locus glycoprotein domain
PAN_2 PF08276 371 - 434 9.2e-12 PAN-like domain
B_lectin PF01453 511 - 561 6e-09 D-mannose binding lectin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 992
Acc65I GGTACC 1 cut(s) 371
AccB1I GGYRCC 1 cut(s) 371
AccB7I CCANNNNNTGG 2 cut(s) 385, 1724
AciI CCGC 1 cut(s) 1613
AclWI GGATC 4 cut(s) 181, 320, 1610, 1623
AcoI YGGCCR 1 cut(s) 1330
AcsI RAATTY 5 cut(s) 203, 670, 763, 801, 1425
AcuI CTGAAG 2 cut(s) 106, 1120
AcvI CACGTG 1 cut(s) 1278
AfaI GTAC 5 cut(s) 373, 863, 917, 1006, 1268
AfiI CCNNNNNNNGG 6 cut(s) 230, 385, 620, 857, 982, 1724
AflII CTTAAG 1 cut(s) 1093
AflIII ACRYGT 1 cut(s) 1277
AjnI CCWGG 4 cut(s) 556, 1233, 1581, 1660
AjuI GAANNNNNNNTTGG 2 cut(s) 697, 729
AluBI AGCT 8 cut(s) 126, 194, 528, 677, 723, 901, 933, 1051
AluI AGCT 8 cut(s) 126, 194, 528, 677, 723, 901, 933, 1051
Alw21I GWGCWC 2 cut(s) 703, 935
Alw26I GTCTC 4 cut(s) 315, 830, 1513, 1518
AlwI GGATC 4 cut(s) 181, 320, 1610, 1623
AoxI GGCC 1 cut(s) 1330
ApeKI GCWGC 3 cut(s) 509, 677, 740
ApoI RAATTY 5 cut(s) 203, 670, 763, 801, 1425
Asp700I GAANNNNTTC 1 cut(s) 1537
Asp718I GGTACC 1 cut(s) 371
AspLEI GCGC 1 cut(s) 1159
AspS9I GGNCC 1 cut(s) 1300
AsuC2I CCSGG 2 cut(s) 622, 1357
AsuHPI GGTGA 3 cut(s) 107, 1613, 1726
AsuII TTCGAA 1 cut(s) 1054
AvaII GGWCC 1 cut(s) 1300
BalI TGGCCA 1 cut(s) 1332
BamHI GGATCC 1 cut(s) 1615
BanI GGYRCC 1 cut(s) 371
BanII GRGCYC 1 cut(s) 935
BbrPI CACGTG 1 cut(s) 1278
BbsI GAAGAC 3 cut(s) 654, 1314, 1536
Bbv12I GWGCWC 2 cut(s) 703, 935
BbvI GCAGC 3 cut(s) 521, 664, 727
BccI CCATC 3 cut(s) 86, 164, 464
BciT130I CCWGG 4 cut(s) 558, 1235, 1583, 1662
BciVI GTATCC 1 cut(s) 1588
BclI TGATCA 1 cut(s) 1512
BcnI CCSGG 2 cut(s) 622, 1357
BcoDI GTCTC 4 cut(s) 315, 830, 1513, 1518
BfaI CTAG 3 cut(s) 132, 399, 1745
BfmI CTRYAG 2 cut(s) 678, 741
BfoI RGCGCY 1 cut(s) 1160
BfrI CTTAAG 1 cut(s) 1093
BfuI GTATCC 1 cut(s) 1588
BglII AGATCT 1 cut(s) 1629
BisI GCNGC 3 cut(s) 510, 678, 741
BlsI GCNGC 3 cut(s) 511, 679, 742
BmcAI AGTACT 1 cut(s) 1006
Bme1390I CCNGG 6 cut(s) 558, 622, 1235, 1357, 1583, 1662
Bme18I GGWCC 1 cut(s) 1300
BmgT120I GGNCC 1 cut(s) 1300
BmiI GGNNCC 2 cut(s) 373, 1617
BmrFI CCNGG 6 cut(s) 558, 622, 1235, 1357, 1583, 1662
BmrI ACTGGG 2 cut(s) 221, 1734
BmsI GCATC 4 cut(s) 57, 487, 1079, 1488
BmuI ACTGGG 2 cut(s) 221, 1734
BpiI GAAGAC 3 cut(s) 654, 1314, 1536
BpmI CTGGAG 5 cut(s) 216, 369, 709, 949, 1092
Bpu14I TTCGAA 1 cut(s) 1054
BpuEI CTTGAG 1 cut(s) 446
BpuMI CCSGG 2 cut(s) 622, 1357
BsaAI YACGTR 1 cut(s) 1278
BsaJI CCNNGG 3 cut(s) 293, 557, 1661
Bsc4I CCNNNNNNNGG 6 cut(s) 230, 385, 620, 857, 982, 1724
Bse1I ACTGG 9 cut(s) 216, 352, 655, 692, 898, 932, 1067, 1603, 1729
Bse3DI GCAATG 1 cut(s) 1350
BseBI CCWGG 4 cut(s) 558, 1235, 1583, 1662
BseDI CCNNGG 3 cut(s) 293, 557, 1661
BseGI GGATG 5 cut(s) 72, 472, 567, 1094, 1671
BseLI CCNNNNNNNGG 6 cut(s) 230, 385, 620, 857, 982, 1724
BseMI GCAATG 1 cut(s) 1350
BseMII CTCAG 2 cut(s) 258, 738
BseNI ACTGG 9 cut(s) 216, 352, 655, 692, 898, 932, 1067, 1603, 1729
BseXI GCAGC 3 cut(s) 521, 664, 727
BseYI CCCAGC 1 cut(s) 1047
BshFI GGCC 1 cut(s) 1332
BshNI GGYRCC 1 cut(s) 371
BsiHKAI GWGCWC 2 cut(s) 703, 935
BsiSI CCGG 2 cut(s) 621, 1356
BslFI GGGAC 1 cut(s) 998
BslI CCNNNNNNNGG 6 cut(s) 230, 385, 620, 857, 982, 1724
BsmAI GTCTC 4 cut(s) 315, 830, 1513, 1518
BsmBI CGTCTC 2 cut(s) 315, 1513
BsmFI GGGAC 1 cut(s) 998
BsmI GAATGC 1 cut(s) 1235
BsnI GGCC 1 cut(s) 1332
Bsp119I TTCGAA 1 cut(s) 1054
Bsp1286I GDGCHC 2 cut(s) 703, 935
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
BspACI CCGC 1 cut(s) 1613
BspANI GGCC 1 cut(s) 1332
BspCNI CTCAG 2 cut(s) 257, 737
BspLI GGNNCC 2 cut(s) 373, 1617
BspMAI CTGCAG 2 cut(s) 682, 745
BspPI GGATC 4 cut(s) 181, 320, 1610, 1623
BspT104I TTCGAA 1 cut(s) 1054
BspT107I GGYRCC 1 cut(s) 371
BspTI CTTAAG 1 cut(s) 1093
BsrDI GCAATG 1 cut(s) 1350
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 9 cut(s) 216, 352, 655, 692, 898, 932, 1067, 1603, 1729
BssECI CCNNGG 3 cut(s) 293, 557, 1661
BssMI GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
BssT1I CCWWGG 1 cut(s) 293
Bst2UI CCWGG 4 cut(s) 558, 1235, 1583, 1662
Bst4CI ACNGT 6 cut(s) 301, 438, 454, 977, 1300, 1398
Bst6I CTCTTC 3 cut(s) 104, 229, 1311
BstAFI CTTAAG 1 cut(s) 1093
BstAUI TGTACA 1 cut(s) 915
BstBAI YACGTR 1 cut(s) 1278
BstBI TTCGAA 1 cut(s) 1054
BstC8I GCNNGC 4 cut(s) 336, 738, 1348, 1477
BstDEI CTNAG 3 cut(s) 244, 724, 1304
BstF5I GGATG 5 cut(s) 72, 472, 567, 1094, 1671
BstH2I RGCGCY 1 cut(s) 1160
BstHHI GCGC 1 cut(s) 1159
BstKTI GATC 9 cut(s) 176, 328, 426, 857, 1411, 1515, 1618, 1632, 1750
BstMAI GTCTC 4 cut(s) 315, 830, 1513, 1518
BstMBI GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
BstMWI GCNNNNNNNGC 3 cut(s) 506, 746, 1352
BstNI CCWGG 4 cut(s) 558, 1235, 1583, 1662
BstNSI RCATGY 1 cut(s) 1479
BstSCI CCNGG 6 cut(s) 556, 620, 1233, 1355, 1581, 1660
BstSFI CTRYAG 2 cut(s) 678, 741
BstV1I GCAGC 3 cut(s) 521, 664, 727
BstV2I GAAGAC 3 cut(s) 654, 1314, 1536
BstX2I RGATCY 2 cut(s) 1615, 1629
BstYI RGATCY 2 cut(s) 1615, 1629
BsuI GTATCC 1 cut(s) 1588
BsuRI GGCC 1 cut(s) 1332
BtsCI GGATG 5 cut(s) 72, 472, 567, 1094, 1671
BtsI GCAGTG 3 cut(s) 329, 970, 1458
BtsIMutI CAGTG 5 cut(s) 329, 345, 459, 970, 1458
Cac8I GCNNGC 4 cut(s) 336, 738, 1348, 1477
CfoI GCGC 1 cut(s) 1159
Cfr13I GGNCC 1 cut(s) 1300
CsiI ACCWGGT 1 cut(s) 1581
Csp6I GTAC 5 cut(s) 372, 862, 916, 1005, 1267
CviAII CATG 7 cut(s) 230, 594, 939, 1476, 1510, 1552, 1698
CviQI GTAC 5 cut(s) 372, 862, 916, 1005, 1267
DdeI CTNAG 3 cut(s) 244, 724, 1304
DpnI GATC 9 cut(s) 175, 327, 425, 856, 1410, 1514, 1617, 1631, 1749
DpnII GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
DraI TTTAAA 1 cut(s) 637
DrdI GACNNNNNNGTC 1 cut(s) 992
DseDI GACNNNNNNGTC 1 cut(s) 992
EaeI YGGCCR 1 cut(s) 1330
Eam1104I CTCTTC 3 cut(s) 104, 229, 1311
EarI CTCTTC 3 cut(s) 104, 229, 1311
Ecl136II GAGCTC 1 cut(s) 933
Eco130I CCWWGG 1 cut(s) 293
Eco24I GRGCYC 1 cut(s) 935
Eco47I GGWCC 1 cut(s) 1300
Eco53kI GAGCTC 1 cut(s) 933
Eco57I CTGAAG 2 cut(s) 106, 1120
Eco72I CACGTG 1 cut(s) 1278
EcoICRI GAGCTC 1 cut(s) 933
EcoRI GAATTC 1 cut(s) 670
EcoRII CCWGG 4 cut(s) 556, 1233, 1581, 1660
EcoT14I CCWWGG 1 cut(s) 293
EcoT22I ATGCAT 1 cut(s) 1481
EcoT38I GRGCYC 1 cut(s) 935
ErhI CCWWGG 1 cut(s) 293
Esp3I CGTCTC 2 cut(s) 315, 1513
FaeI CATG 7 cut(s) 233, 597, 942, 1479, 1513, 1555, 1701
FalI AAGNNNNNCTT 2 cut(s) 890, 922
FaqI GGGAC 1 cut(s) 998
FatI CATG 7 cut(s) 229, 593, 938, 1475, 1509, 1551, 1697
FauNDI CATATG 3 cut(s) 91, 272, 1211
FbaI TGATCA 1 cut(s) 1512
Fnu4HI GCNGC 3 cut(s) 510, 678, 741
FokI GGATG 5 cut(s) 79, 479, 574, 1101, 1678
FriOI GRGCYC 1 cut(s) 935
Fsp4HI GCNGC 3 cut(s) 510, 678, 741
FspBI CTAG 3 cut(s) 132, 399, 1745
GlaI GCGC 1 cut(s) 1158
GluI GCNGC 3 cut(s) 510, 678, 741
GsaI CCCAGC 1 cut(s) 1051
GsuI CTGGAG 5 cut(s) 216, 369, 709, 949, 1092
HaeII RGCGCY 1 cut(s) 1160
HaeIII GGCC 1 cut(s) 1332
HapII CCGG 2 cut(s) 621, 1356
HhaI GCGC 1 cut(s) 1159
Hin1II CATG 7 cut(s) 233, 597, 942, 1479, 1513, 1555, 1701
Hin6I GCGC 1 cut(s) 1157
HinP1I GCGC 1 cut(s) 1157
HincII GTYRAC 2 cut(s) 1608, 1692
HindII GTYRAC 2 cut(s) 1608, 1692
HindIII AAGCTT 1 cut(s) 526
HinfI GANTC 7 cut(s) 216, 240, 289, 775, 1100, 1319, 1571
HpaII CCGG 2 cut(s) 621, 1356
HphI GGTGA 3 cut(s) 107, 1613, 1726
Hpy166II GTNNAC 6 cut(s) 916, 918, 1104, 1269, 1608, 1692
Hpy188I TCNGA 7 cut(s) 14, 178, 450, 588, 727, 1363, 1440
Hpy8I GTNNAC 6 cut(s) 916, 918, 1104, 1269, 1608, 1692
Hpy99I CGWCG 2 cut(s) 1300, 1709
HpyAV CCTTC 5 cut(s) 130, 173, 1138, 1364, 1747
HpyCH4III ACNGT 6 cut(s) 301, 438, 454, 977, 1300, 1398
HpyCH4IV ACGT 2 cut(s) 1130, 1277
HpyF10VI GCNNNNNNNGC 3 cut(s) 506, 746, 1352
HpyF3I CTNAG 3 cut(s) 244, 724, 1304
HpySE526I ACGT 2 cut(s) 1130, 1277
Hsp92II CATG 7 cut(s) 233, 597, 942, 1479, 1513, 1555, 1701
HspAI GCGC 1 cut(s) 1157
KpnI GGTACC 1 cut(s) 375
Ksp22I TGATCA 1 cut(s) 1512
Kzo9I GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
LmnI GCTCC 2 cut(s) 930, 1701
Lsp1109I GCAGC 3 cut(s) 521, 664, 727
LweI GCATC 4 cut(s) 57, 487, 1079, 1488
MabI ACCWGGT 1 cut(s) 1581
MaeI CTAG 3 cut(s) 132, 399, 1745
MaeII ACGT 2 cut(s) 1130, 1277
MaeIII GTNAC 4 cut(s) 251, 753, 819, 1679
MalI GATC 9 cut(s) 175, 327, 425, 856, 1410, 1514, 1617, 1631, 1749
MboI GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
MflI RGATCY 2 cut(s) 1615, 1629
MhlI GDGCHC 2 cut(s) 703, 935
MlsI TGGCCA 1 cut(s) 1332
MluCI AATT 8 cut(s) 159, 203, 670, 712, 763, 801, 865, 1425
MluNI TGGCCA 1 cut(s) 1332
MlyI GAGTC 4 cut(s) 784, 1109, 1328, 1580
MmeI TCCRAC 2 cut(s) 366, 1667
MnlI CCTC 5 cut(s) 191, 230, 386, 1028, 1349
Mox20I TGGCCA 1 cut(s) 1332
Mph1103I ATGCAT 1 cut(s) 1481
MroXI GAANNNNTTC 1 cut(s) 1537
MscI TGGCCA 1 cut(s) 1332
MseI TTAA 9 cut(s) 162, 485, 581, 636, 972, 1094, 1283, 1589, 1670
MslI CAYNNNNRTG 1 cut(s) 1556
Msp20I TGGCCA 1 cut(s) 1332
MspA1I CMGCKG 3 cut(s) 194, 677, 1613
MspCI CTTAAG 1 cut(s) 1093
MspI CCGG 2 cut(s) 621, 1356
MspR9I CCNGG 6 cut(s) 558, 622, 1235, 1357, 1583, 1662
Mva1269I GAATGC 1 cut(s) 1235
MvaI CCWGG 4 cut(s) 558, 1235, 1583, 1662
MwoI GCNNNNNNNGC 3 cut(s) 506, 746, 1352
NciI CCSGG 2 cut(s) 622, 1357
NdeI CATATG 3 cut(s) 91, 272, 1211
NdeII GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
NlaIII CATG 7 cut(s) 233, 597, 942, 1479, 1513, 1555, 1701
NlaIV GGNNCC 2 cut(s) 373, 1617
NmuCI GTSAC 1 cut(s) 819
NsiI ATGCAT 1 cut(s) 1481
NspI RCATGY 1 cut(s) 1479
NspV TTCGAA 1 cut(s) 1054
PaeI GCATGC 1 cut(s) 1479
PcsI WCGNNNNNNNCGW 1 cut(s) 1030
PctI GAATGC 1 cut(s) 1235
PdmI GAANNNNTTC 1 cut(s) 1537
PfeI GAWTC 3 cut(s) 216, 240, 289
PflMI CCANNNNNTGG 2 cut(s) 385, 1724
PkrI GCNGC 3 cut(s) 511, 679, 742
PleI GAGTC 4 cut(s) 783, 1108, 1327, 1579
PmaCI CACGTG 1 cut(s) 1278
PmlI CACGTG 1 cut(s) 1278
PpsI GAGTC 4 cut(s) 783, 1108, 1327, 1579
Ppu21I YACGTR 1 cut(s) 1278
Psp124BI GAGCTC 1 cut(s) 935
Psp6I CCWGG 4 cut(s) 556, 1233, 1581, 1660
PspCI CACGTG 1 cut(s) 1278
PspFI CCCAGC 1 cut(s) 1047
PspGI CCWGG 4 cut(s) 556, 1233, 1581, 1660
PspN4I GGNNCC 2 cut(s) 373, 1617
PspPI GGNCC 1 cut(s) 1300
PstI CTGCAG 2 cut(s) 682, 745
PsuI RGATCY 2 cut(s) 1615, 1629
PvuII CAGCTG 2 cut(s) 194, 677
RsaI GTAC 5 cut(s) 373, 863, 917, 1006, 1268
RsaNI GTAC 5 cut(s) 372, 862, 916, 1005, 1267
RseI CAYNNNNRTG 1 cut(s) 1556
SacI GAGCTC 1 cut(s) 935
SaqAI TTAA 9 cut(s) 162, 485, 581, 636, 972, 1094, 1283, 1589, 1670
SatI GCNGC 3 cut(s) 510, 678, 741
Sau3AI GATC 9 cut(s) 173, 325, 423, 854, 1408, 1512, 1615, 1629, 1747
Sau96I GGNCC 1 cut(s) 1300
ScaI AGTACT 1 cut(s) 1006
SchI GAGTC 4 cut(s) 784, 1109, 1328, 1580
ScrFI CCNGG 6 cut(s) 558, 622, 1235, 1357, 1583, 1662
SduI GDGCHC 2 cut(s) 703, 935
SexAI ACCWGGT 1 cut(s) 1581
SfaNI GCATC 4 cut(s) 57, 487, 1079, 1488
SfcI CTRYAG 2 cut(s) 678, 741
SfuI TTCGAA 1 cut(s) 1054
SinI GGWCC 1 cut(s) 1300
SmiMI CAYNNNNRTG 1 cut(s) 1556
SmlI CTYRAG 2 cut(s) 461, 1093
SmoI CTYRAG 2 cut(s) 461, 1093
SphI GCATGC 1 cut(s) 1479
Sse9I AATT 8 cut(s) 159, 203, 670, 712, 763, 801, 865, 1425
SsiI CCGC 1 cut(s) 1613
SspMI CTAG 3 cut(s) 132, 399, 1745
SstI GAGCTC 1 cut(s) 935
StyD4I CCNGG 6 cut(s) 556, 620, 1233, 1355, 1581, 1660
StyI CCWWGG 1 cut(s) 293
TaaI ACNGT 6 cut(s) 301, 438, 454, 977, 1300, 1398
TaiI ACGT 2 cut(s) 1133, 1280
TaqI TCGA 4 cut(s) 935, 1024, 1054, 1295
TasI AATT 8 cut(s) 159, 203, 670, 712, 763, 801, 865, 1425
TatI WGTACW 2 cut(s) 915, 1004
TfiI GAWTC 3 cut(s) 216, 240, 289
Tru1I TTAA 9 cut(s) 162, 485, 581, 636, 972, 1094, 1283, 1589, 1670
Tru9I TTAA 9 cut(s) 162, 485, 581, 636, 972, 1094, 1283, 1589, 1670
TscAI CASTG 5 cut(s) 336, 352, 459, 970, 1458
TseFI GTSAC 1 cut(s) 819
TseI GCWGC 3 cut(s) 509, 677, 740
Tsp45I GTSAC 1 cut(s) 819
TspDTI ATGAA 9 cut(s) 17, 541, 582, 660, 744, 771, 1206, 1645, 1686
TspRI CASTG 5 cut(s) 336, 352, 459, 970, 1458
Van91I CCANNNNNTGG 2 cut(s) 385, 1724
Vha464I CTTAAG 1 cut(s) 1093
VpaK11BI GGWCC 1 cut(s) 1300
XapI RAATTY 5 cut(s) 203, 670, 763, 801, 1425
XbaI TCTAGA 1 cut(s) 398
XceI RCATGY 1 cut(s) 1479
XmnI GAANNNNTTC 1 cut(s) 1537
XspI CTAG 3 cut(s) 132, 399, 1745
ZrmI AGTACT 1 cut(s) 1006
Zsp2I ATGCAT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.