Rw2G045700

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000412
Physical Location & Seq
Reverse (-)
72790979 .. 72795264
4286 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G045700.1

Sequence Viewer

Length: 3078 bp
ATGGTAAATAGCATGGTATCTTACATCTTCTTGTATATAGTACTATTGCTTTGCTGTTATGATTACCTATTTTGTTCTGCAAGAGATACACTGACACCGGCCGATCCAGTTACTGATGACGAATCAGGAACTCTTGTTTCAGCAGGAGGAAAATTTGAATTGGGTTTCTTTACCCCTACTCCTACAAGGAAAAGTAACTTGGGCGCTGATAGCAAATTTGTTGGCATATGGTACCATGAGGTCAGTCCAAAAACAGTTGTATGGGTTGCCAACAGAGAAGATCCACTGCCTGCCAATTCCACTGGGCTTCTCACAATCGAAGATGGTAACCTCTGCGTGTTGGATAAAGTTACTGGAAAGTCTTATTGGTCCACAAACATCGGAACATCTTCGTCTTCTAACATGATTGTGAAAATAATGGAGTCTGGGAACCTGGTGTTAATGGATTCTGATCAGATGGCAGCAAATATTCTGTGGGAGAGCTTTCAGAATCCCACTGATACATTCATTCCTGGGATGCTAATGGATAAAGACTTCCAGTTGACTTCTTGGAGGGACGAAGATGACCCAAGACCGGGAAACTTCACCTTCAAACTCGATCAGAGTGAGAGACAGTATATCATAATGAAGAAGTCGTTTCCGTACTGGAAAAGTGGAGAGCCAGGTAATCATTTCAGCTCAGATGAAATGCGTCCTGAAGGAGCTTACTTGCTATCAAATTTCAGCCCCAGAAGTCGGTTATCTCGTTATAATGTTCAAATTCCTTTGGATTACAATTATACACGGTTGGTGATAAATTTTACTGGAGAGTTACGGTTTTGGACTTGGAACAAGAAGCAGTGGCTTCTCTCGTGGTCGGAGCCAAAAGATCAGTGTAGGGAGTTTAACCCTTGTGGAAATTTTGGCAGCTGCAATAATAATAATTGGCCTTTGGTATGCAAATGTTTGCCCGGTTTCAAGCCCAAGGACCCATATAATTGGAATTCTGGAGATTTTTCAGGTGGATGTGATAGAGAGTCATCAATCTCTTACAACAACAGCAGGTTCTTGAGCTTAAAGATGATGAAAGTTGGAGAGGCAGAGTCACCGTTCGATGTGGCCAATGAAACAGAGTGCAGGAACGCGTGCCTAGATAAAACCCTGTGCCAGGCTTACTCGTATGGCGTTCTAGCTAAAGACACAGCTCAAAGGGGTACTGCTACTACCTCCTCGTGCTGGATGTGGTTGGAAGATCTAAATAATCTTGTAGAAGAGTATGGCGGTGGCCACAATATCTTTGTTCGAGTTGCCTCGTCTGATATAGAATCTACTGTAAGAGACTGCGAGCCTTGTGGCACAACGACAATACCTTATCCCCTGAGCACCCGACTGGACTGTGGAGACCCCATGTACTTCCGTTTCAACTGCAACACTTCGACAGGCCAGGTTAGCTACATGGGACTGAAGGACACCTTTCGAGTTATAAGCATCAGACCAAGTACGCAAAAATTTGTACTCCAAGGGTTGCCAGCCGAAAAGGTCGATCATTGTGATTCTAGAAACAGAGCCAAAACTCTGCAGCTTAACCCATCATTCCCATTTAAGATAAGTAGTTGGTGCAATGCTGACCTTGGAAACTTTAGATCTGAAGTATTCTCTTCTCGAGTCCTTAATGTAGTAGAGTTGGGTTGGGAGCTACCGCTAGAACCAGCCTGCAATACATCAGTAGACTGCAAGGGTTGGCCAAATTCAACCTGCAATCCAGCAAGAGATGGAATGAAAAGATGCCTTTGCAACAAGAGTTTTCAATGGAATGCCTTTAACTTCAATTGTACTCAAGAAGGTAGTCCTCATGAGCCATCAAACTCTCCATCGCAATCGTCCTTAGGAGAGCATTCAATCAGAAAAGTTTCATTCTATCTGATAATTGTGGCGGTGCTTATAAGCATGATTTTACTGGCATGCATCATTTCTATTTATATATGGAGAAGAAAAATGACCAGAAAACAAGATCAAATAAGTCGTGCACAATTTGATAGTGAAAGACGAGTCAAGGAGTTGATAGACACAAGTGAGTTCAACGAAGAAGATGAGAAAGGTCTAGATGTACCCTTTTTTGATTTGCAAAGCATACTCGAAGCTACAGATAATTTCTCAGATGCTAACAAGCTAGGACAAGGGGGATATGGGCCTGTTTACAAGGGGAAGTTTTTTGGAGGTCAAGAAATTGCAGTAAAGAGGCTATCAAAGGTTTCAGGACAAGGGTTACAGGAATTTAGGAATGAGGTCGTGCTGATTGCCAAACTTCAGCACCGAAATCTTGTTAGACTCAGAGGATATTGCATGAAAGGAGAAGAAAAGATTTTACTTTATGAGTACATGCCCAACAAAAGCTTGGATTCCTTTATATTTGATCATACACAAGACGTATTTCTCAATTGGGAGATGCGGTTTAACATCATTTTGGGAATCGCTCGAGGACTTCTTTATCTTCATCAAGATTCGAGGTTGAGGATTATTCATAGAGATTTGAAAACCAGCAACGTACTTTTGGATGAGGAGATGAACCCCAAAATATCCGACTTCGGCTTGGCCAGGATTGTTGGAGGCAAAGAAACAGAGGCAAACACAAATACAGTAGTAGGAACCTATGGCTACATGTCTCCGGAATATGCATTAGATGGAACTTTCTCAGTCAAATCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTTGAGATAATCAGTGGAAAAAAGAATGCAGGATTTTTTCAGTCCAAACAAACTTTCAGCCTGCTTGGTTATGCATGGGAACTCTGGACAGAAGACAAGGTGTTGGATTTAATGGACAAGAATTTGGAAGAAAGTTGTAACAGAAGTGAATTTATAAAGTGTGTAAATGTTGGGCTCTTATGCGTTCAAGAAGATCCGGTTGATCGCCCTACAATGTCACATGTTATAACCTTGCTTGACAGTGAAACTGCAATCCCTGCAACTCCTAAACAACCAGCCTTTTTCATAAGGAGAGGCAACTCTAGCACAGCTTCCTCTTCTACTAAGCCAGAAACAATTTGTGAAATAAATACTCTGGAAGGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

1025

Amino Acids

115.96

Weight (kDa)

5.47

Isoelectric Point (pI)

45.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 85 - 180 1.5e-25 D-mannose binding lectin
S_locus_glycop PF00954 216 - 322 2.3e-17 S-locus glycoprotein domain
PAN_2 PF08276 345 - 414 4.8e-08 PAN-like domain
Pkinase PF00069 712 - 978 2.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 715 - 980 1.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 750, 1463, 1922, 2864, 2936
Acc36I ACCTGC 2 cut(s) 1032, 1742
Acc65I GGTACC 1 cut(s) 231
AccB1I GGYRCC 1 cut(s) 231
AccI GTMKAC 1 cut(s) 1707
AccII CGCG 1 cut(s) 1124
AccIII TCCGGA 1 cut(s) 2644
AciI CCGC 4 cut(s) 1260, 1679, 1913, 2428
AclWI GGATC 3 cut(s) 98, 275, 2897
AcoI YGGCCR 5 cut(s) 99, 1098, 1264, 1721, 2571
AcuI CTGAAG 4 cut(s) 717, 1463, 1647, 2270
AfiI CCNNNNNNNGG 5 cut(s) 574, 575, 735, 1147, 1215
AflIII ACRYGT 3 cut(s) 1122, 2637, 2929
AjnI CCWGG 6 cut(s) 432, 511, 661, 1146, 1422, 2573
AjuI GAANNNNNNNTTGG 6 cut(s) 182, 214, 349, 381, 2747, 2779
Alw21I GWGCWC 2 cut(s) 1364, 2008
Alw26I GTCTC 4 cut(s) 604, 1311, 1374, 2646
Alw44I GTGCAC 1 cut(s) 2004
AlwI GGATC 3 cut(s) 98, 275, 2897
AlwNI CAGNNNCTG 1 cut(s) 113
Ama87I CYCGRG 2 cut(s) 1641, 2454
Aor13HI TCCGGA 1 cut(s) 2644
AoxI GGCC 8 cut(s) 99, 926, 1098, 1264, 1420, 1721, 2168, 2571
ApaLI GTGCAC 1 cut(s) 2004
ApeKI GCWGC 4 cut(s) 461, 906, 909, 1558
ArsI GACNNNNNNTTYG 2 cut(s) 2670, 2702
Asp700I GAANNNNTTC 2 cut(s) 388, 1888
Asp718I GGTACC 1 cut(s) 231
AspLEI GCGC 1 cut(s) 206
AspS9I GGNCC 3 cut(s) 369, 967, 2168
AsuC2I CCSGG 2 cut(s) 576, 951
AsuHPI GGTGA 3 cut(s) 577, 802, 1077
AvaI CYCGRG 2 cut(s) 1641, 2454
AvaII GGWCC 2 cut(s) 369, 967
AxyI CCTNAGG 1 cut(s) 1864
BaeGI GKGCMC 1 cut(s) 2008
BalI TGGCCA 4 cut(s) 1100, 1266, 1723, 2573
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 1 cut(s) 2886
BauI CACGAG 2 cut(s) 850, 1210
BbsI GAAGAC 2 cut(s) 387, 2808
Bbv12I GWGCWC 2 cut(s) 1364, 2008
BbvI GCAGC 4 cut(s) 473, 896, 918, 1570
BccI CCATC 7 cut(s) 317, 451, 1576, 1745, 1846, 1858, 2654
BciT130I CCWGG 6 cut(s) 434, 513, 663, 1148, 1424, 2575
BclI TGATCA 2 cut(s) 451, 2392
BcnI CCSGG 2 cut(s) 576, 951
BcoDI GTCTC 4 cut(s) 604, 1311, 1374, 2646
BfaI CTAG 7 cut(s) 1130, 1169, 1536, 1682, 2081, 2150, 3012
BfmI CTRYAG 2 cut(s) 1556, 2121
BfoI RGCGCY 1 cut(s) 207
BfuAI ACCTGC 2 cut(s) 1032, 1742
BglII AGATCT 2 cut(s) 1231, 1622
BisI GCNGC 4 cut(s) 462, 907, 910, 1559
BlsI GCNGC 4 cut(s) 463, 908, 911, 1560
BmcAI AGTACT 1 cut(s) 42
Bme1390I CCNGG 8 cut(s) 434, 513, 576, 663, 951, 1148, 1424, 2575
Bme18I GGWCC 2 cut(s) 369, 967
BmeT110I CYCGRG 2 cut(s) 1641, 2454
BmgT120I GGNCC 3 cut(s) 369, 967, 2168
BmiI GGNNCC 5 cut(s) 233, 431, 861, 969, 2626
BmrFI CCNGG 8 cut(s) 434, 513, 576, 663, 951, 1148, 1424, 2575
BmrI ACTGGG 1 cut(s) 312
BmsI GCATC 6 cut(s) 507, 1476, 1754, 1953, 2128, 2415
BmuI ACTGGG 1 cut(s) 312
BpiI GAAGAC 2 cut(s) 387, 2808
BpmI CTGGAG 2 cut(s) 825, 1008
Bpu10I CCTNAGC 1 cut(s) 1358
BpuEI CTTGAG 3 cut(s) 1069, 1800, 2732
BpuMI CCSGG 2 cut(s) 576, 951
BsaBI GATNNNNATC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 1374
BsaJI CCNNGG 4 cut(s) 512, 963, 1498, 1609
BsaWI WCCGGW 2 cut(s) 2644, 2905
BsaXI ACNNNNNCTCC 4 cut(s) 163, 193, 2414, 2444
Bsc4I CCNNNNNNNGG 5 cut(s) 574, 575, 735, 1147, 1215
Bse118I RCCGGY 1 cut(s) 97
Bse1I ACTGG 8 cut(s) 107, 307, 358, 538, 650, 808, 1374, 1941
Bse21I CCTNAGG 1 cut(s) 1864
Bse3DI GCAATG 1 cut(s) 1606
Bse8I GATNNNNATC 1 cut(s) 450
BseAI TCCGGA 1 cut(s) 2644
BseBI CCWGG 6 cut(s) 434, 513, 663, 1148, 1424, 2575
BseDI CCNNGG 4 cut(s) 512, 963, 1498, 1609
BseGI GGATG 4 cut(s) 522, 1010, 1224, 2539
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 5 cut(s) 574, 575, 735, 1147, 1215
BseMI GCAATG 1 cut(s) 1606
BseMII CTCAG 5 cut(s) 693, 1349, 2148, 2323, 2685
BseNI ACTGG 8 cut(s) 107, 307, 358, 538, 650, 808, 1374, 1941
BseRI GAGGAG 2 cut(s) 1198, 2552
BseSI GKGCMC 1 cut(s) 2008
BseX3I CGGCCG 1 cut(s) 99
BseXI GCAGC 4 cut(s) 473, 896, 918, 1570
BsgI GTGCAG 1 cut(s) 1135
Bsh1236I CGCG 1 cut(s) 1124
Bsh1285I CGRYCG 1 cut(s) 102
BshFI GGCC 8 cut(s) 101, 928, 1100, 1266, 1422, 1723, 2170, 2573
BshNI GGYRCC 1 cut(s) 231
BsiEI CGRYCG 1 cut(s) 102
BsiHKAI GWGCWC 2 cut(s) 1364, 2008
BsiHKCI CYCGRG 2 cut(s) 1641, 2454
BsiSI CCGG 5 cut(s) 98, 575, 951, 2645, 2906
BslFI GGGAC 2 cut(s) 569, 1452
BslI CCNNNNNNNGG 5 cut(s) 574, 575, 735, 1147, 1215
BsmAI GTCTC 4 cut(s) 604, 1311, 1374, 2646
BsmFI GGGAC 2 cut(s) 569, 1452
BsmI GAATGC 3 cut(s) 1798, 1873, 2740
BsnI GGCC 8 cut(s) 101, 928, 1100, 1266, 1422, 1723, 2170, 2573
Bso31I GGTCTC 1 cut(s) 1374
BsoBI CYCGRG 2 cut(s) 1641, 2454
Bsp1286I GDGCHC 3 cut(s) 1364, 2008, 2886
Bsp13I TCCGGA 1 cut(s) 2644
BspACI CCGC 4 cut(s) 1260, 1679, 1913, 2428
BspANI GGCC 8 cut(s) 101, 928, 1100, 1266, 1422, 1723, 2170, 2573
BspCNI CTCAG 5 cut(s) 692, 1350, 2147, 2322, 2684
BspEI TCCGGA 1 cut(s) 2644
BspFNI CGCG 1 cut(s) 1124
BspHI TCATGA 1 cut(s) 1831
BspLI GGNNCC 5 cut(s) 233, 431, 861, 969, 2626
BspMAI CTGCAG 1 cut(s) 1560
BspMI ACCTGC 2 cut(s) 1032, 1742
BspPI GGATC 3 cut(s) 98, 275, 2897
BspT107I GGYRCC 1 cut(s) 231
BspTNI GGTCTC 1 cut(s) 1374
BsrDI GCAATG 1 cut(s) 1606
BsrFI RCCGGY 1 cut(s) 97
BsrI ACTGG 8 cut(s) 107, 307, 358, 538, 650, 808, 1374, 1941
BssAI RCCGGY 1 cut(s) 97
BssECI CCNNGG 4 cut(s) 512, 963, 1498, 1609
BssSI CACGAG 2 cut(s) 850, 1210
BssT1I CCWWGG 3 cut(s) 963, 1498, 1609
Bst2BI CACGAG 2 cut(s) 850, 1210
Bst2UI CCWGG 6 cut(s) 434, 513, 663, 1148, 1424, 2575
Bst4CI ACNGT 9 cut(s) 256, 615, 786, 816, 1089, 1312, 1376, 2617, 2951
Bst6I CTCTTC 3 cut(s) 1245, 1642, 3031
BstAPI GCANNNNNTGC 1 cut(s) 2966
BstC8I GCNNGC 7 cut(s) 291, 1126, 1325, 1509, 1693, 1942, 2771
BstDEI CTNAG 7 cut(s) 679, 1358, 1864, 2134, 2309, 2671, 3033
BstEII GGTNACC 1 cut(s) 326
BstENI CCTNNNNNAGG 1 cut(s) 1145
BstF5I GGATG 4 cut(s) 522, 1010, 1224, 2539
BstFNI CGCG 1 cut(s) 1124
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 1 cut(s) 206
BstMAI GTCTC 4 cut(s) 604, 1311, 1374, 2646
BstMCI CGRYCG 1 cut(s) 102
BstMWI GCNNNNNNNGC 4 cut(s) 210, 1428, 2966, 3012
BstNI CCWGG 6 cut(s) 434, 513, 663, 1148, 1424, 2575
BstNSI RCATGY 4 cut(s) 1944, 2362, 2641, 2933
BstPI GGTNACC 1 cut(s) 326
BstSCI CCNGG 8 cut(s) 432, 511, 574, 661, 949, 1146, 1422, 2573
BstSFI CTRYAG 2 cut(s) 1556, 2121
BstSLI GKGCMC 1 cut(s) 2008
BstUI CGCG 1 cut(s) 1124
BstV1I GCAGC 4 cut(s) 473, 896, 918, 1570
BstV2I GAAGAC 2 cut(s) 387, 2808
BstX2I RGATCY 4 cut(s) 280, 1231, 1622, 2902
BstXI CCANNNNNNTGG 1 cut(s) 978
BstYI RGATCY 4 cut(s) 280, 1231, 1622, 2902
BstZI CGGCCG 1 cut(s) 99
Bsu36I CCTNAGG 1 cut(s) 1864
BsuRI GGCC 8 cut(s) 101, 928, 1100, 1266, 1422, 1723, 2170, 2573
BtgZI GCGATG 1 cut(s) 1836
BtsCI GGATG 4 cut(s) 522, 1010, 1224, 2539
BtsI GCAGTG 2 cut(s) 284, 845
BtsIMutI CAGTG 8 cut(s) 89, 284, 300, 495, 845, 878, 2728, 2956
BveI ACCTGC 2 cut(s) 1032, 1742
Cac8I GCNNGC 7 cut(s) 291, 1126, 1325, 1509, 1693, 1942, 2771
CaiI CAGNNNCTG 1 cut(s) 113
CciI TCATGA 1 cut(s) 1831
CfoI GCGC 1 cut(s) 206
Cfr10I RCCGGY 1 cut(s) 97
Cfr13I GGNCC 3 cut(s) 369, 967, 2168
CseI GACGC 1 cut(s) 680
CsiI ACCWGGT 1 cut(s) 432
DdeI CTNAG 7 cut(s) 679, 1358, 1864, 2134, 2309, 2671, 3033
EaeI YGGCCR 5 cut(s) 99, 1098, 1264, 1721, 2571
EagI CGGCCG 1 cut(s) 99
Eam1104I CTCTTC 3 cut(s) 1245, 1642, 3031
EarI CTCTTC 3 cut(s) 1245, 1642, 3031
EclXI CGGCCG 1 cut(s) 99
Eco130I CCWWGG 3 cut(s) 963, 1498, 1609
Eco24I GRGCYC 1 cut(s) 2886
Eco31I GGTCTC 1 cut(s) 1374
Eco47I GGWCC 2 cut(s) 369, 967
Eco52I CGGCCG 1 cut(s) 99
Eco57I CTGAAG 4 cut(s) 717, 1463, 1647, 2270
Eco81I CCTNAGG 1 cut(s) 1864
Eco88I CYCGRG 2 cut(s) 1641, 2454
Eco91I GGTNACC 1 cut(s) 326
EcoNI CCTNNNNNAGG 1 cut(s) 1145
EcoO109I RGGNCCY 1 cut(s) 967
EcoO65I GGTNACC 1 cut(s) 326
EcoRI GAATTC 1 cut(s) 982
EcoRII CCWGG 6 cut(s) 432, 511, 661, 1146, 1422, 2573
EcoT14I CCWWGG 3 cut(s) 963, 1498, 1609
EcoT22I ATGCAT 3 cut(s) 1946, 2656, 2785
EcoT38I GRGCYC 1 cut(s) 2886
ErhI CCWWGG 3 cut(s) 963, 1498, 1609
FalI AAGNNNNNCTT 2 cut(s) 1436, 1468
FaqI GGGAC 2 cut(s) 569, 1452
FauNDI CATATG 1 cut(s) 227
FbaI TGATCA 2 cut(s) 451, 2392
FblI GTMKAC 1 cut(s) 1707
Fnu4HI GCNGC 4 cut(s) 462, 907, 910, 1559
FokI GGATG 4 cut(s) 529, 1017, 1231, 2546
FriOI GRGCYC 1 cut(s) 2886
Fsp4HI GCNGC 4 cut(s) 462, 907, 910, 1559
FspBI CTAG 7 cut(s) 1130, 1169, 1536, 1682, 2081, 2150, 3012
GlaI GCGC 1 cut(s) 205
GluI GCNGC 4 cut(s) 462, 907, 910, 1559
GsuI CTGGAG 2 cut(s) 825, 1008
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 8 cut(s) 101, 928, 1100, 1266, 1422, 1723, 2170, 2573
HapII CCGG 5 cut(s) 98, 575, 951, 2645, 2906
HgaI GACGC 1 cut(s) 680
HhaI GCGC 1 cut(s) 206
Hin6I GCGC 1 cut(s) 204
HinP1I GCGC 1 cut(s) 204
HincII GTYRAC 1 cut(s) 543
HindII GTYRAC 1 cut(s) 543
HindIII AAGCTT 1 cut(s) 2371
HpaII CCGG 5 cut(s) 98, 575, 951, 2645, 2906
HphI GGTGA 3 cut(s) 577, 802, 1077
Hpy166II GTNNAC 5 cut(s) 372, 543, 1708, 2006, 2176
Hpy8I GTNNAC 5 cut(s) 372, 543, 1708, 2006, 2176
HpyAV CCTTC 5 cut(s) 598, 692, 1438, 1814, 3062
HpyCH4III ACNGT 9 cut(s) 256, 615, 786, 816, 1089, 1312, 1376, 2617, 2951
HpyCH4IV ACGT 2 cut(s) 2406, 2523
HpyF10VI GCNNNNNNNGC 4 cut(s) 210, 1428, 2966, 3012
HpyF3I CTNAG 7 cut(s) 679, 1358, 1864, 2134, 2309, 2671, 3033
HpySE526I ACGT 2 cut(s) 2406, 2523
HspAI GCGC 1 cut(s) 204
Kpn2I TCCGGA 1 cut(s) 2644
KpnI GGTACC 1 cut(s) 235
Ksp22I TGATCA 2 cut(s) 451, 2392
LmnI GCTCC 3 cut(s) 701, 859, 1672
Lsp1109I GCAGC 4 cut(s) 473, 896, 918, 1570
LweI GCATC 6 cut(s) 507, 1476, 1754, 1953, 2128, 2415
MabI ACCWGGT 1 cut(s) 432
MaeI CTAG 7 cut(s) 1130, 1169, 1536, 1682, 2081, 2150, 3012
MaeII ACGT 2 cut(s) 2406, 2523
MaeIII GTNAC 9 cut(s) 109, 194, 326, 349, 810, 1083, 2244, 2846, 2925
MfeI CAATTG 2 cut(s) 1807, 2416
MflI RGATCY 4 cut(s) 280, 1231, 1622, 2902
MhlI GDGCHC 3 cut(s) 1364, 2008, 2886
MlsI TGGCCA 4 cut(s) 1100, 1266, 1723, 2573
MluI ACGCGT 1 cut(s) 1122
MluNI TGGCCA 4 cut(s) 1100, 1266, 1723, 2573
MlyI GAGTC 6 cut(s) 431, 1025, 1091, 1653, 2037, 2301
MmeI TCCRAC 7 cut(s) 321, 837, 1051, 1206, 2563, 2583, 2793
Mox20I TGGCCA 4 cut(s) 1100, 1266, 1723, 2573
Mph1103I ATGCAT 3 cut(s) 1946, 2656, 2785
MroI TCCGGA 1 cut(s) 2644
MroXI GAANNNNTTC 2 cut(s) 388, 1888
MscI TGGCCA 4 cut(s) 1100, 1266, 1723, 2573
MseI TTAA 9 cut(s) 440, 885, 1055, 1563, 1581, 1650, 1800, 2433, 2819
MslI CAYNNNNRTG 1 cut(s) 407
Msp20I TGGCCA 4 cut(s) 1100, 1266, 1723, 2573
MspA1I CMGCKG 1 cut(s) 909
MspI CCGG 5 cut(s) 98, 575, 951, 2645, 2906
MspR9I CCNGG 8 cut(s) 434, 513, 576, 663, 951, 1148, 1424, 2575
MunI CAATTG 2 cut(s) 1807, 2416
Mva1269I GAATGC 3 cut(s) 1798, 1873, 2740
MvaI CCWGG 6 cut(s) 434, 513, 663, 1148, 1424, 2575
MvnI CGCG 1 cut(s) 1124
MwoI GCNNNNNNNGC 4 cut(s) 210, 1428, 2966, 3012
NciI CCSGG 2 cut(s) 576, 951
NdeI CATATG 1 cut(s) 227
NlaIV GGNNCC 5 cut(s) 233, 431, 861, 969, 2626
NmuCI GTSAC 2 cut(s) 1083, 2925
NsiI ATGCAT 3 cut(s) 1946, 2656, 2785
NspI RCATGY 4 cut(s) 1944, 2362, 2641, 2933
PaeI GCATGC 1 cut(s) 1944
PaeR7I CTCGAG 2 cut(s) 1641, 2454
PagI TCATGA 1 cut(s) 1831
PciI ACATGT 2 cut(s) 2637, 2929
PcsI WCGNNNNNNNCGW 1 cut(s) 742
PctI GAATGC 3 cut(s) 1798, 1873, 2740
PdmI GAANNNNTTC 2 cut(s) 388, 1888
PfeI GAWTC 8 cut(s) 122, 446, 490, 1304, 1532, 2378, 2448, 2480
PkrI GCNGC 4 cut(s) 463, 908, 911, 1560
PleI GAGTC 6 cut(s) 430, 1024, 1090, 1652, 2036, 2301
PpsI GAGTC 6 cut(s) 430, 1024, 1090, 1652, 2036, 2301
PpuMI RGGWCCY 1 cut(s) 967
PscI ACATGT 2 cut(s) 2637, 2929
PsiI TTATAA 5 cut(s) 750, 1463, 1922, 2864, 2936
Psp5II RGGWCCY 1 cut(s) 967
Psp6I CCWGG 6 cut(s) 432, 511, 661, 1146, 1422, 2573
PspEI GGTNACC 1 cut(s) 326
PspGI CCWGG 6 cut(s) 432, 511, 661, 1146, 1422, 2573
PspN4I GGNNCC 5 cut(s) 233, 431, 861, 969, 2626
PspPI GGNCC 3 cut(s) 369, 967, 2168
PspPPI RGGWCCY 1 cut(s) 967
PspXI VCTCGAGB 1 cut(s) 2454
PstI CTGCAG 1 cut(s) 1560
PstNI CAGNNNCTG 1 cut(s) 113
PsuI RGATCY 4 cut(s) 280, 1231, 1622, 2902
PvuII CAGCTG 1 cut(s) 909
RseI CAYNNNNRTG 1 cut(s) 407
SaqAI TTAA 9 cut(s) 440, 885, 1055, 1563, 1581, 1650, 1800, 2433, 2819
SatI GCNGC 4 cut(s) 462, 907, 910, 1559
Sau96I GGNCC 3 cut(s) 369, 967, 2168
ScaI AGTACT 1 cut(s) 42
SchI GAGTC 6 cut(s) 431, 1025, 1091, 1653, 2037, 2301
ScrFI CCNGG 8 cut(s) 434, 513, 576, 663, 951, 1148, 1424, 2575
SduI GDGCHC 3 cut(s) 1364, 2008, 2886
SexAI ACCWGGT 1 cut(s) 432
SfaNI GCATC 6 cut(s) 507, 1476, 1754, 1953, 2128, 2415
SfcI CTRYAG 2 cut(s) 1556, 2121
Sfr274I CTCGAG 2 cut(s) 1641, 2454
SinI GGWCC 2 cut(s) 369, 967
SlaI CTCGAG 2 cut(s) 1641, 2454
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 5 cut(s) 1048, 1641, 1815, 2454, 2711
SmoI CTYRAG 5 cut(s) 1048, 1641, 1815, 2454, 2711
SphI GCATGC 1 cut(s) 1944
SsiI CCGC 4 cut(s) 1260, 1679, 1913, 2428
SspI AATATT 1 cut(s) 469
SspMI CTAG 7 cut(s) 1130, 1169, 1536, 1682, 2081, 2150, 3012
StyD4I CCNGG 8 cut(s) 432, 511, 574, 661, 949, 1146, 1422, 2573
StyI CCWWGG 3 cut(s) 963, 1498, 1609
TaaI ACNGT 9 cut(s) 256, 615, 786, 816, 1089, 1312, 1376, 2617, 2951
TaiI ACGT 2 cut(s) 2409, 2526
TatI WGTACW 5 cut(s) 40, 1389, 1492, 1811, 2355
TfiI GAWTC 8 cut(s) 122, 446, 490, 1304, 1532, 2378, 2448, 2480
Tru1I TTAA 9 cut(s) 440, 885, 1055, 1563, 1581, 1650, 1800, 2433, 2819
Tru9I TTAA 9 cut(s) 440, 885, 1055, 1563, 1581, 1650, 1800, 2433, 2819
TscAI CASTG 8 cut(s) 96, 291, 307, 502, 845, 878, 2728, 2956
TseFI GTSAC 2 cut(s) 1083, 2925
TseI GCWGC 4 cut(s) 461, 906, 909, 1558
Tsp45I GTSAC 2 cut(s) 1083, 2925
TspGWI ACGGA 2 cut(s) 630, 1385
TspRI CASTG 8 cut(s) 96, 291, 307, 502, 845, 878, 2728, 2956
VneI GTGCAC 1 cut(s) 2004
VpaK11BI GGWCC 2 cut(s) 369, 967
XagI CCTNNNNNAGG 1 cut(s) 1145
XbaI TCTAGA 2 cut(s) 1535, 2080
XceI RCATGY 4 cut(s) 1944, 2362, 2641, 2933
XcmI CCANNNNNNNNNTGG 1 cut(s) 2371
XhoI CTCGAG 2 cut(s) 1641, 2454
XmiI GTMKAC 1 cut(s) 1707
XmnI GAANNNNTTC 2 cut(s) 388, 1888
XspI CTAG 7 cut(s) 1130, 1169, 1536, 1682, 2081, 2150, 3012
ZrmI AGTACT 1 cut(s) 42
Zsp2I ATGCAT 3 cut(s) 1946, 2656, 2785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.