Rh2CG535900

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000412
Physical Location & Seq
Reverse (-)
71262621 .. 71267818
5198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG535900.1

Sequence Viewer

Length: 3078 bp
ATGGTATCTAACATCTTCCTCTTGTATGTAGTACTATTGCTTTGCTGTTATGATTACCTATTTTGTTCTGCAAGAGATACACTGACACATGCCGATCCAGTTATTGATGAGGAATCAGGAACTCTTGTTTCAGCAGGAGAAAAATTTGAATTGGGTTTCTTTACCCCTACTCCTATAGGGAAAAGTAACTCGGGCGCTGATAGCAGATATGTTGGCATATGGTATTATAAGGTCACTCCAAGAACAGTTGTATGGGTTGCCAACAGAGATAAACCTCTGCCTGCCAATTCCACTGGAGTTCTCACAATCGAAGGTGGTAACCTCCTCGTGTTGGATAATGTTACTGGAGAGCGTTATTGGTCCACAGACATTGGAACATCTTCGTCTTCTAACATGATTGTGAAGATAATGGAGTCTGGAAACCTGGTGTTAATGGATTATGATCAGATGGCAGCGAATATTCTGTGGCAGAGCTTTCAAAACCCAACTGATACATTCATTCCTGGGATGCTAATGGATAAAAATCTTCAGTTGACTTCTTGGAGAGACAAAGATGACCCGAGACCGGGGAACTTCAACTTCAAACTCGATCAGAGTAAGAACCAGTATATCGTAATGAACAAGTCGCTTCCTTACTGGAAAAGTGGAGAGCCAGATAATCGTTTCAGCCCATATGAAGTGCCTCCTAAAGTAACTGGCTTGCTATCATATTTCAGCAACAGCAGCAGCACTGATACAAGTCGACCATCTATTAATTTTACAATTGTGCGACCTTTGGATTACAATTATGCACGGTTGGTGATAGATTTTACTGGAGAGTTACAGTTTTCCACTTGGAATGAAAACAAGAAGGAGTGGTTTCCTTCATGGTCGGAGCCAAAAGATAATTGTAGTAAGTTCAACCTTTGTGGAAGTTTTGGCAGCTGCAATAATAATAATCGGCCTTGGCTATGCAAATGTTTGCCTGGTTTCAAGCCCAGGTCCCCAGATAATTGGAATTCTGAAGATTTTTCAGGTGGATGTGATAGAGAGTCATCAATCTCTGACAACAACAGCACGTTCTTGAGCTTAAAGATGATGAAAGTTGGAGAGGCAGAGTCACCGTTCGATGTGGGCAGCGAAACAGAATGCAGGAAGGAGTGCCTAAAGAACCCCCAGTGCCAGGCTTACTCGTATGCCGTTCTAGCTGAAGACAGAGCTCAAAGGGGTACTAATACTACTACCAGCACTTCCTCGAAGTGCTGGACATGGTTGGAAGATTTAAAGAATCTTGTAGAAGAGTATGACAGTGGCCACAATATCTCTGTTCGAGTTGCCTCGTCTGATATAGAATCTACTGTAAGAGGCTGCCAGCCTTGTGGCACAACGATGATACCTTATCCCCTGAGCACCGGTCGGGACTGTGGTGATCCCATGTACTTCCGTTTCATCTGCAACACTTTGACAGGCCAGGTTAGCTTCGTGGGACTGAATGACACCTTTCGAGTTATAAGCATCGAACCAAGTATGCAAAAATTTGTACTCAAATGGTTGCCAGCCAAAAAGGTCGATGAGTGTGATTCTAGATACAGAGCCAAAACCCTGGAGCTCAATGCATCGTTCCCATTTAAGATAAGTAGTTGGTGGTGCGATGCTGACCTTGGAGACTATTATGTAGTAGAGTTGGGTTGGAAACTACCGCCGGAACCAGCCTGCAATACATCAGCAGACTGCAAGGGTTGGCCAAATTCAACCTGCAAGCCAGCAAGAGATGGAATGAAAAGATGCCTTTGCAACAAAAGTTTCCAATGGAATGTCACTTACTTCAATTGTACTCAAGAAGGTAGTCTTCATGAGCCATCAAACTCTCCATCGTCATCGTTCTTAGGAGAGCATTCAAGCAGAAAAGTTACATTCTATCTGATAATTGTGGCGGTGCTTATAAGCATGATTTTACTGGCATGCGTCATTTCTATTTATATATGGAGAAGAAAAATGACCAGAAAACAAGATCAAATAAGTCGTGCACAGTTTGATAGTGAAAGACGAGTCAAGGAGTTGATAGACACAAGTGAGTTCAACGAAGAAGATGAGAAAGGTATAGATGTACCCTTTTTTGATTTGCAAAGCATACTGGAAGCCACAGATAATTTCTCAGATGCTAACAAGCTAGGACAAGGGGGTTATGGGCCTGTTTACAAGGGGAAGTTCTTTGGAGGTCAAGAAATTGCAGTAAAGAGGCTATCAAAAGTTTCAGGACAAGGGTTACAGGAATTTAGGAATGAGGTCGTGTTGATTGCCAAACTTCAGCACCGAAATCTTGTTAGACTCAGAGGATATTGCATGAAAGGAGAAGAAAAGATTTTACTTTATGAGTACATGCCCAACAAAAGCTTAGATTCCTTTATATTTGATCATACACAAAACGTATTTCTCAATTGGGAGATGCGGTTTAACATCATTTTGGGAATAGCTCGAGGACTTCTCTATCTTCATCAAGATTCCAGGTTGAGGATTATTCATAGAGATTTGAAAACCAGCAACGTACTTTTGGATGAGGAGATGAACCCCAAAATATCTGACTTCGGCTTGGCCAGGATTGTTGGAGGCAAAGAAACCGAGGCAAACACAAACACAGTAGTAGGAACCTATGGCTACATGTCTCCGGAATATGCACTAGATGGAACTTTTTCAGTCAAATCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTTGAGATAATCAGTGGAAAAAAGAATGCAGGATTCTTTCAGTCCAAACAAACTTTCAGCCTCCTTGGTTATGCATGGGAACTCTGGACAGGAGACAAGGTGTTGGATTTAATGGACAAGAATTTGGAAGAAAGTTTCAACAGAAGTGAATTTGTAAGGTGTGTAAATGTTGGGCTCTTATGCGTACAAGAAGATCCGGTTGATCGCCCTACAATGTCAAATGTTATTACCTTGCTTGACAGTGAAACTGCAATCCCTGCAACTCCTAAACAACCAGCCTTTTTCATAAGGAGAGGCAACTCTAGCACAGCTTCCTCTTCTACTAAGCCAGAGACAGTTTCTGAAATAACTGCTCTGGAAGGCAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

1025

Amino Acids

115.8

Weight (kDa)

5.46

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 82 - 177 2.1e-25 D-mannose binding lectin
S_locus_glycop PF00954 236 - 327 3.2e-20 S-locus glycoprotein domain
PAN_2 PF08276 349 - 423 1.9e-07 PAN-like domain
Pkinase PF00069 712 - 922 5.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 715 - 980 7.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 228, 1490, 1922
Acc36I ACCTGC 1 cut(s) 1742
AccI GTMKAC 1 cut(s) 742
AccIII TCCGGA 1 cut(s) 2644
AciI CCGC 3 cut(s) 1679, 1913, 2428
AclWI GGATC 3 cut(s) 89, 1403, 2897
AcoI YGGCCR 3 cut(s) 1291, 1721, 2571
AcsI RAATTY 7 cut(s) 143, 997, 1514, 1726, 2252, 2830, 2858
AcuI CTGAAG 4 cut(s) 512, 1023, 1209, 2270
AfaI GTAC 9 cut(s) 33, 1210, 1418, 1521, 1813, 2088, 2357, 2526, 2895
AfiI CCNNNNNNNGG 5 cut(s) 331, 565, 566, 1162, 2490
AflIII ACRYGT 1 cut(s) 2637
AgeI ACCGGT 1 cut(s) 1391
AjnI CCWGG 9 cut(s) 423, 502, 964, 977, 1161, 1449, 1581, 2483, 2573
AjuI GAANNNNNNNTTGG 2 cut(s) 2747, 2779
Alw21I GWGCWC 4 cut(s) 1201, 1391, 1590, 2008
Alw26I GTCTC 6 cut(s) 540, 556, 1638, 2646, 2796, 3035
Alw44I GTGCAC 1 cut(s) 2004
AlwI GGATC 3 cut(s) 89, 1403, 2897
AlwNI CAGNNNCTG 1 cut(s) 3050
Ama87I CYCGRG 3 cut(s) 190, 559, 2454
Aor13HI TCCGGA 1 cut(s) 2644
AoxI GGCC 6 cut(s) 941, 1291, 1447, 1721, 2168, 2571
ApaLI GTGCAC 1 cut(s) 2004
ApeKI GCWGC 7 cut(s) 452, 723, 726, 921, 924, 1116, 1347
ApoI RAATTY 7 cut(s) 143, 997, 1514, 1726, 2252, 2830, 2858
ArsI GACNNNNNNTTYG 2 cut(s) 2670, 2702
AseI ATTAAT 1 cut(s) 753
AsiGI ACCGGT 1 cut(s) 1391
Asp700I GAANNNNTTC 2 cut(s) 379, 2668
AspLEI GCGC 1 cut(s) 197
AspS9I GGNCC 3 cut(s) 360, 981, 2168
AsuC2I CCSGG 1 cut(s) 567
AsuHPI GGTGA 3 cut(s) 811, 1092, 1418
AvaI CYCGRG 3 cut(s) 190, 559, 2454
AvaII GGWCC 2 cut(s) 360, 981
BaeGI GKGCMC 1 cut(s) 2008
BalI TGGCCA 3 cut(s) 1293, 1723, 2573
BanII GRGCYC 3 cut(s) 1201, 1590, 2886
BauI CACGAG 1 cut(s) 326
BbsI GAAGAC 3 cut(s) 378, 1197, 1820
Bbv12I GWGCWC 4 cut(s) 1201, 1391, 1590, 2008
BbvI GCAGC 7 cut(s) 464, 735, 738, 911, 933, 1128, 1334
BccI CCATC 6 cut(s) 442, 754, 1745, 1846, 1858, 2654
BceAI ACGGC 1 cut(s) 1163
BciT130I CCWGG 9 cut(s) 425, 504, 966, 979, 1163, 1451, 1583, 2485, 2575
BclI TGATCA 2 cut(s) 442, 2392
BcnI CCSGG 1 cut(s) 567
BcoDI GTCTC 6 cut(s) 540, 556, 1638, 2646, 2796, 3035
BfaI CTAG 5 cut(s) 1184, 1563, 2150, 2657, 3012
BfmI CTRYAG 1 cut(s) 174
BfoI RGCGCY 1 cut(s) 198
BfuAI ACCTGC 1 cut(s) 1742
BisI GCNGC 7 cut(s) 453, 724, 727, 922, 925, 1117, 1348
BlsI GCNGC 7 cut(s) 454, 725, 728, 923, 926, 1118, 1349
BmcAI AGTACT 1 cut(s) 33
Bme18I GGWCC 2 cut(s) 360, 981
BmeT110I CYCGRG 3 cut(s) 190, 559, 2454
BmgT120I GGNCC 3 cut(s) 360, 981, 2168
BmiI GGNNCC 4 cut(s) 876, 983, 1686, 2626
BmrI ACTGGG 1 cut(s) 1150
BmsI GCATC 7 cut(s) 498, 1503, 1604, 1621, 1754, 2128, 2415
BmuI ACTGGG 1 cut(s) 1150
BpiI GAAGAC 3 cut(s) 378, 1197, 1820
BplI GAGNNNNNCTC 2 cut(s) 2448, 2480
BpmI CTGGAG 4 cut(s) 315, 366, 834, 1604
Bpu10I CCTNAGC 1 cut(s) 1385
BpuEI CTTGAG 3 cut(s) 1084, 1800, 2732
BpuMI CCSGG 1 cut(s) 567
BsaBI GATNNNNATC 2 cut(s) 441, 522
BsaI GGTCTC 1 cut(s) 556
BsaJI CCNNGG 8 cut(s) 503, 566, 944, 977, 1581, 1639, 2598, 2773
BsaWI WCCGGW 3 cut(s) 1391, 2644, 2905
BsaXI ACNNNNNCTCC 6 cut(s) 154, 184, 2414, 2444, 2793, 2823
Bsc4I CCNNNNNNNGG 5 cut(s) 331, 565, 566, 1162, 2490
Bse118I RCCGGY 1 cut(s) 1391
Bse8I GATNNNNATC 2 cut(s) 441, 522
BseAI TCCGGA 1 cut(s) 2644
BseBI CCWGG 9 cut(s) 425, 504, 966, 979, 1163, 1451, 1583, 2485, 2575
BseDI CCNNGG 8 cut(s) 503, 566, 944, 977, 1581, 1639, 2598, 2773
BseGI GGATG 3 cut(s) 513, 1025, 2539
BseJI GATNNNNATC 2 cut(s) 441, 522
BseLI CCNNNNNNNGG 5 cut(s) 331, 565, 566, 1162, 2490
BseMII CTCAG 3 cut(s) 1376, 2148, 2323
BseRI GAGGAG 2 cut(s) 314, 2552
BseSI GKGCMC 1 cut(s) 2008
BseXI GCAGC 7 cut(s) 464, 735, 738, 911, 933, 1128, 1334
Bsh1285I CGRYCG 1 cut(s) 1396
BshFI GGCC 6 cut(s) 943, 1293, 1449, 1723, 2170, 2573
BshTI ACCGGT 1 cut(s) 1391
BsiEI CGRYCG 1 cut(s) 1396
BsiHKAI GWGCWC 4 cut(s) 1201, 1391, 1590, 2008
BsiHKCI CYCGRG 3 cut(s) 190, 559, 2454
BsiSI CCGG 5 cut(s) 566, 1392, 1682, 2645, 2906
BslFI GGGAC 3 cut(s) 967, 1412, 1479
BslI CCNNNNNNNGG 5 cut(s) 331, 565, 566, 1162, 2490
BsmAI GTCTC 6 cut(s) 540, 556, 1638, 2646, 2796, 3035
BsmFI GGGAC 3 cut(s) 967, 1412, 1479
BsmI GAATGC 3 cut(s) 1133, 1873, 2740
BsnI GGCC 6 cut(s) 943, 1293, 1449, 1723, 2170, 2573
Bso31I GGTCTC 1 cut(s) 556
BsoBI CYCGRG 3 cut(s) 190, 559, 2454
Bsp1286I GDGCHC 5 cut(s) 1201, 1391, 1590, 2008, 2886
Bsp13I TCCGGA 1 cut(s) 2644
Bsp143I GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
BspACI CCGC 3 cut(s) 1679, 1913, 2428
BspANI GGCC 6 cut(s) 943, 1293, 1449, 1723, 2170, 2573
BspCNI CTCAG 3 cut(s) 1377, 2147, 2322
BspEI TCCGGA 1 cut(s) 2644
BspHI TCATGA 1 cut(s) 1831
BspLI GGNNCC 4 cut(s) 876, 983, 1686, 2626
BspMI ACCTGC 1 cut(s) 1742
BspPI GGATC 3 cut(s) 89, 1403, 2897
BspTNI GGTCTC 1 cut(s) 556
BsrFI RCCGGY 1 cut(s) 1391
BssAI RCCGGY 1 cut(s) 1391
BssECI CCNNGG 8 cut(s) 503, 566, 944, 977, 1581, 1639, 2598, 2773
BssMI GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 3 cut(s) 944, 1639, 2773
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 9 cut(s) 425, 504, 966, 979, 1163, 1451, 1583, 2485, 2575
Bst6I CTCTTC 2 cut(s) 1272, 3031
BstAPI GCANNNNNTGC 1 cut(s) 2966
BstC8I GCNNGC 8 cut(s) 282, 701, 1352, 1536, 1693, 1739, 1743, 1942
BstDEI CTNAG 6 cut(s) 1385, 1864, 2134, 2309, 2374, 3033
BstEII GGTNACC 1 cut(s) 317
BstF5I GGATG 3 cut(s) 513, 1025, 2539
BstH2I RGCGCY 1 cut(s) 198
BstHHI GCGC 1 cut(s) 197
BstKTI GATC 8 cut(s) 97, 445, 592, 1411, 1993, 2395, 2905, 2914
BstMAI GTCTC 6 cut(s) 540, 556, 1638, 2646, 2796, 3035
BstMBI GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
BstMCI CGRYCG 1 cut(s) 1396
BstMWI GCNNNNNNNGC 6 cut(s) 201, 723, 1184, 1455, 2966, 3012
BstNI CCWGG 9 cut(s) 425, 504, 966, 979, 1163, 1451, 1583, 2485, 2575
BstNSI RCATGY 4 cut(s) 92, 1944, 2362, 2641
BstPI GGTNACC 1 cut(s) 317
BstSFI CTRYAG 1 cut(s) 174
BstSLI GKGCMC 1 cut(s) 2008
BstV1I GCAGC 7 cut(s) 464, 735, 738, 911, 933, 1128, 1334
BstV2I GAAGAC 3 cut(s) 378, 1197, 1820
BstX2I RGATCY 1 cut(s) 2902
BstXI CCANNNNNNTGG 3 cut(s) 993, 1358, 1582
BstYI RGATCY 1 cut(s) 2902
BsuRI GGCC 6 cut(s) 943, 1293, 1449, 1723, 2170, 2573
BtgZI GCGATG 1 cut(s) 1644
BtsCI GGATG 3 cut(s) 513, 1025, 2539
BtsIMutI CAGTG 7 cut(s) 80, 291, 729, 1163, 1294, 2728, 2956
BveI ACCTGC 1 cut(s) 1742
Cac8I GCNNGC 8 cut(s) 282, 701, 1352, 1536, 1693, 1739, 1743, 1942
CaiI CAGNNNCTG 1 cut(s) 3050
CciI TCATGA 1 cut(s) 1831
CfoI GCGC 1 cut(s) 197
Cfr10I RCCGGY 1 cut(s) 1391
Cfr13I GGNCC 3 cut(s) 360, 981, 2168
CseI GACGC 1 cut(s) 1933
CsiI ACCWGGT 1 cut(s) 423
Csp6I GTAC 9 cut(s) 32, 1209, 1417, 1520, 1812, 2087, 2356, 2525, 2894
CspAI ACCGGT 1 cut(s) 1391
CspCI CAANNNNNGTGG 4 cut(s) 352, 387, 889, 924
CviQI GTAC 9 cut(s) 32, 1209, 1417, 1520, 1812, 2087, 2356, 2525, 2894
DdeI CTNAG 6 cut(s) 1385, 1864, 2134, 2309, 2374, 3033
DpnI GATC 8 cut(s) 96, 444, 591, 1410, 1992, 2394, 2904, 2913
DpnII GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
DraI TTTAAA 1 cut(s) 1263
EaeI YGGCCR 3 cut(s) 1291, 1721, 2571
Eam1104I CTCTTC 2 cut(s) 1272, 3031
EarI CTCTTC 2 cut(s) 1272, 3031
Ecl136II GAGCTC 2 cut(s) 1199, 1588
Eco130I CCWWGG 3 cut(s) 944, 1639, 2773
Eco24I GRGCYC 3 cut(s) 1201, 1590, 2886
Eco31I GGTCTC 1 cut(s) 556
Eco47I GGWCC 2 cut(s) 360, 981
Eco53kI GAGCTC 2 cut(s) 1199, 1588
Eco57I CTGAAG 4 cut(s) 512, 1023, 1209, 2270
Eco88I CYCGRG 3 cut(s) 190, 559, 2454
Eco91I GGTNACC 1 cut(s) 317
EcoICRI GAGCTC 2 cut(s) 1199, 1588
EcoO109I RGGNCCY 1 cut(s) 981
EcoO65I GGTNACC 1 cut(s) 317
EcoRI GAATTC 1 cut(s) 997
EcoRII CCWGG 9 cut(s) 423, 502, 964, 977, 1161, 1449, 1581, 2483, 2573
EcoT14I CCWWGG 3 cut(s) 944, 1639, 2773
EcoT22I ATGCAT 2 cut(s) 1597, 2785
EcoT38I GRGCYC 3 cut(s) 1201, 1590, 2886
ErhI CCWWGG 3 cut(s) 944, 1639, 2773
FalI AAGNNNNNCTT 2 cut(s) 1812, 1844
FaqI GGGAC 3 cut(s) 967, 1412, 1479
FauNDI CATATG 2 cut(s) 218, 673
FbaI TGATCA 2 cut(s) 442, 2392
FblI GTMKAC 1 cut(s) 742
Fnu4HI GCNGC 7 cut(s) 453, 724, 727, 922, 925, 1117, 1348
FokI GGATG 3 cut(s) 520, 1032, 2546
FriOI GRGCYC 3 cut(s) 1201, 1590, 2886
Fsp4HI GCNGC 7 cut(s) 453, 724, 727, 922, 925, 1117, 1348
FspBI CTAG 5 cut(s) 1184, 1563, 2150, 2657, 3012
GlaI GCGC 1 cut(s) 196
GluI GCNGC 7 cut(s) 453, 724, 727, 922, 925, 1117, 1348
GsuI CTGGAG 4 cut(s) 315, 366, 834, 1604
HaeII RGCGCY 1 cut(s) 198
HaeIII GGCC 6 cut(s) 943, 1293, 1449, 1723, 2170, 2573
HapII CCGG 5 cut(s) 566, 1392, 1682, 2645, 2906
HgaI GACGC 1 cut(s) 1933
HhaI GCGC 1 cut(s) 197
Hin6I GCGC 1 cut(s) 195
HinP1I GCGC 1 cut(s) 195
HincII GTYRAC 2 cut(s) 534, 743
HindII GTYRAC 2 cut(s) 534, 743
HindIII AAGCTT 1 cut(s) 2371
HpaII CCGG 5 cut(s) 566, 1392, 1682, 2645, 2906
HphI GGTGA 3 cut(s) 811, 1092, 1418
Hpy166II GTNNAC 5 cut(s) 363, 534, 743, 2006, 2176
Hpy8I GTNNAC 5 cut(s) 363, 534, 743, 2006, 2176
HpyAV CCTTC 6 cut(s) 305, 844, 873, 1129, 1814, 3062
HpyCH4IV ACGT 3 cut(s) 1058, 2406, 2523
HpyF10VI GCNNNNNNNGC 6 cut(s) 201, 723, 1184, 1455, 2966, 3012
HpyF3I CTNAG 6 cut(s) 1385, 1864, 2134, 2309, 2374, 3033
HpySE526I ACGT 3 cut(s) 1058, 2406, 2523
HspAI GCGC 1 cut(s) 195
Kpn2I TCCGGA 1 cut(s) 2644
Ksp22I TGATCA 2 cut(s) 442, 2392
Kzo9I GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
LmnI GCTCC 2 cut(s) 874, 1585
Lsp1109I GCAGC 7 cut(s) 464, 735, 738, 911, 933, 1128, 1334
LweI GCATC 7 cut(s) 498, 1503, 1604, 1621, 1754, 2128, 2415
MabI ACCWGGT 1 cut(s) 423
MaeI CTAG 5 cut(s) 1184, 1563, 2150, 2657, 3012
MaeII ACGT 3 cut(s) 1058, 2406, 2523
MalI GATC 8 cut(s) 96, 444, 591, 1410, 1992, 2394, 2904, 2913
MboI GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
MfeI CAATTG 3 cut(s) 762, 1807, 2416
MflI RGATCY 1 cut(s) 2902
MhlI GDGCHC 5 cut(s) 1201, 1391, 1590, 2008, 2886
MlsI TGGCCA 3 cut(s) 1293, 1723, 2573
MluNI TGGCCA 3 cut(s) 1293, 1723, 2573
MlyI GAGTC 5 cut(s) 422, 1040, 1106, 2037, 2301
MmeI TCCRAC 7 cut(s) 312, 852, 1066, 1233, 1649, 2563, 2793
Mox20I TGGCCA 3 cut(s) 1293, 1723, 2573
Mph1103I ATGCAT 2 cut(s) 1597, 2785
MroI TCCGGA 1 cut(s) 2644
MroXI GAANNNNTTC 2 cut(s) 379, 2668
MscI TGGCCA 3 cut(s) 1293, 1723, 2573
MseI TTAA 7 cut(s) 431, 753, 1070, 1262, 1608, 2433, 2819
MslI CAYNNNNRTG 2 cut(s) 398, 1367
Msp20I TGGCCA 3 cut(s) 1293, 1723, 2573
MspA1I CMGCKG 1 cut(s) 924
MspI CCGG 5 cut(s) 566, 1392, 1682, 2645, 2906
MunI CAATTG 3 cut(s) 762, 1807, 2416
Mva1269I GAATGC 3 cut(s) 1133, 1873, 2740
MvaI CCWGG 9 cut(s) 425, 504, 966, 979, 1163, 1451, 1583, 2485, 2575
MwoI GCNNNNNNNGC 6 cut(s) 201, 723, 1184, 1455, 2966, 3012
NciI CCSGG 1 cut(s) 567
NdeI CATATG 2 cut(s) 218, 673
NdeII GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
NlaIV GGNNCC 4 cut(s) 876, 983, 1686, 2626
NmuCI GTSAC 3 cut(s) 232, 1098, 1795
NsiI ATGCAT 2 cut(s) 1597, 2785
NspI RCATGY 4 cut(s) 92, 1944, 2362, 2641
PaeI GCATGC 1 cut(s) 1944
PaeR7I CTCGAG 1 cut(s) 2454
PagI TCATGA 1 cut(s) 1831
PciI ACATGT 1 cut(s) 2637
PctI GAATGC 3 cut(s) 1133, 1873, 2740
PdmI GAANNNNTTC 2 cut(s) 379, 2668
PfeI GAWTC 7 cut(s) 113, 1267, 1331, 1559, 2378, 2480, 2742
PinAI ACCGGT 1 cut(s) 1391
PkrI GCNGC 7 cut(s) 454, 725, 728, 923, 926, 1118, 1349
PleI GAGTC 5 cut(s) 421, 1039, 1105, 2036, 2301
PpsI GAGTC 5 cut(s) 421, 1039, 1105, 2036, 2301
PpuMI RGGWCCY 1 cut(s) 981
PscI ACATGT 1 cut(s) 2637
PshBI ATTAAT 1 cut(s) 753
PsiI TTATAA 3 cut(s) 228, 1490, 1922
Psp124BI GAGCTC 2 cut(s) 1201, 1590
Psp5II RGGWCCY 1 cut(s) 981
Psp6I CCWGG 9 cut(s) 423, 502, 964, 977, 1161, 1449, 1581, 2483, 2573
PspEI GGTNACC 1 cut(s) 317
PspGI CCWGG 9 cut(s) 423, 502, 964, 977, 1161, 1449, 1581, 2483, 2573
PspN4I GGNNCC 4 cut(s) 876, 983, 1686, 2626
PspPI GGNCC 3 cut(s) 360, 981, 2168
PspPPI RGGWCCY 1 cut(s) 981
PspXI VCTCGAGB 1 cut(s) 2454
PstNI CAGNNNCTG 1 cut(s) 3050
PsuI RGATCY 1 cut(s) 2902
PvuII CAGCTG 1 cut(s) 924
RsaI GTAC 9 cut(s) 33, 1210, 1418, 1521, 1813, 2088, 2357, 2526, 2895
RsaNI GTAC 9 cut(s) 32, 1209, 1417, 1520, 1812, 2087, 2356, 2525, 2894
RseI CAYNNNNRTG 2 cut(s) 398, 1367
SacI GAGCTC 2 cut(s) 1201, 1590
SalI GTCGAC 1 cut(s) 741
SaqAI TTAA 7 cut(s) 431, 753, 1070, 1262, 1608, 2433, 2819
SatI GCNGC 7 cut(s) 453, 724, 727, 922, 925, 1117, 1348
Sau3AI GATC 8 cut(s) 94, 442, 589, 1408, 1990, 2392, 2902, 2911
Sau96I GGNCC 3 cut(s) 360, 981, 2168
ScaI AGTACT 1 cut(s) 33
SchI GAGTC 5 cut(s) 422, 1040, 1106, 2037, 2301
SduI GDGCHC 5 cut(s) 1201, 1391, 1590, 2008, 2886
SexAI ACCWGGT 1 cut(s) 423
SfaNI GCATC 7 cut(s) 498, 1503, 1604, 1621, 1754, 2128, 2415
SfcI CTRYAG 1 cut(s) 174
Sfr274I CTCGAG 1 cut(s) 2454
SinI GGWCC 2 cut(s) 360, 981
SlaI CTCGAG 1 cut(s) 2454
SmiMI CAYNNNNRTG 2 cut(s) 398, 1367
SmlI CTYRAG 4 cut(s) 1063, 1815, 2454, 2711
SmoI CTYRAG 4 cut(s) 1063, 1815, 2454, 2711
SphI GCATGC 1 cut(s) 1944
SsiI CCGC 3 cut(s) 1679, 1913, 2428
SspI AATATT 1 cut(s) 460
SspMI CTAG 5 cut(s) 1184, 1563, 2150, 2657, 3012
SstI GAGCTC 2 cut(s) 1201, 1590
StyI CCWWGG 3 cut(s) 944, 1639, 2773
TaiI ACGT 3 cut(s) 1061, 2409, 2526
TatI WGTACW 5 cut(s) 31, 1416, 1519, 1811, 2355
TfiI GAWTC 7 cut(s) 113, 1267, 1331, 1559, 2378, 2480, 2742
Tru1I TTAA 7 cut(s) 431, 753, 1070, 1262, 1608, 2433, 2819
Tru9I TTAA 7 cut(s) 431, 753, 1070, 1262, 1608, 2433, 2819
TscAI CASTG 7 cut(s) 87, 298, 736, 1163, 1294, 2728, 2956
TseFI GTSAC 3 cut(s) 232, 1098, 1795
TseI GCWGC 7 cut(s) 452, 723, 726, 921, 924, 1116, 1347
Tsp45I GTSAC 3 cut(s) 232, 1098, 1795
TspGWI ACGGA 1 cut(s) 1412
TspRI CASTG 7 cut(s) 87, 298, 736, 1163, 1294, 2728, 2956
VneI GTGCAC 1 cut(s) 2004
VpaK11BI GGWCC 2 cut(s) 360, 981
VspI ATTAAT 1 cut(s) 753
XapI RAATTY 7 cut(s) 143, 997, 1514, 1726, 2252, 2830, 2858
XbaI TCTAGA 1 cut(s) 1562
XceI RCATGY 4 cut(s) 92, 1944, 2362, 2641
XhoI CTCGAG 1 cut(s) 2454
XmiI GTMKAC 1 cut(s) 742
XmnI GAANNNNTTC 2 cut(s) 379, 2668
XspI CTAG 5 cut(s) 1184, 1563, 2150, 2657, 3012
ZrmI AGTACT 1 cut(s) 33
Zsp2I ATGCAT 2 cut(s) 1597, 2785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.