Rh2CG536200

PAN-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000412
Physical Location & Seq
Reverse (-)
71319075 .. 71346167
27093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG536200.1

Sequence Viewer

Length: 2427 bp
ATGCCTGGGCTACCTTGCCTCGCCTCGCCGTGCACCTTCATCATCGTCGTGATCCTCCTATCACCTTTCCGATCACAATCATCAAGCAGCGATCGGGACTTGAGAGGAAAGGAAGAGAGTCGGAGATCCAGTTCAAGCCTCCAGAAGAGGTTGGACTTGCCTTCGAAGCTGGAGACGAAGTCGTCGCTGTCGATCTGTGGGAGAAGCAAGGAATCTGTCGGCGGCAACAGTGATCTGCGGGAGACCGGAGTCGGTAGAGAAAGACAACAACCAAAAATAATCAATTGTAACCAGCTAATTAAGAAGAAACAATTCATCCGTACATGTTGGGAATTGTGTATTAAGATTGCAATTGTGCATGACATTGCAGAAGTGCATACAAGGAAATTTTGGAGGTTGCCATTGTTTCCATTTGTGTTGGGTGACTTGGGTCTAATCGAAGTTATTAAACTCTTGGGGATCCCAATTTTGTGGAAAATTACTTTAAGAGCTAAAAAATTCCAAAGAATGAAGCAAGGAAATGTACTATTGCTTTGCTATTATGATTACCAATTTTGTTCTGCAAGAGATACACTGACACAGGCCGATCGGGTTGTTGATGAGGAATCAGGAACTCTTGTTTCAGCAGGAGAAAATTTTGAATTGGGTTTCTTTGCCCCTACTCCTATAGTTAAAAGTAACTCGGGCGCTGATAGCAGATATGTTGGCATAAGGTATCATAAGGTTACTCCAAGAACAGTAGTATGGGTTGCCAACAGAGATAAACCTCTACCTGGCAATTCCACTGGAGTTCTCAAAATCGAAGATGGTAACCTCCACGTGTTGGATAATGTTACTGGAGTGTCTTATTGGTCCACAGACATTGGAACATCTTCGTCTTCTAACATGATTGTGAAGATAATGGAGTCTGGAAACCTGGTGTTAATGGATTCTGATCAGATGGCAGCGAATATTCTGTGGCAGAGCTTTCAAGACCCAACTGATACATTCATTCCTGGGATGCTAATGGATAAAAATTTTCAGTTGACTTCTTGGAGAGACAAAGATGACCCGAGACCGGGGAAATTCAACTTCAAACTCGATCAGAGTAAGAACCGGTATATCGTAATGCGCAATAAGTCGCTTCCTTACTGGAAAAGTGGAGACCCAGGTAATCGTTTCAGCCCATATGAAGTGCCTTCTGAAGTAGCTAGCTTGCTATCAAATTTCAGCAGCAGCAGCACTGATACAAGTAGACCATCTATTAATTTTACAATTGTGGATTACAATTATGCACGGTTGGTGATAGATTCTACTGGAGAGTTACAGTTTTCCACTTGGAATGAAGGCAAGACGCAGTGGCTTGTTTCATGGTGGCAGCCAAAAGATCAGTGCAGTGTGTTTAACCCTTGTGGAAACTTTGGAAGCTGTAATAATAATAGTTGGCCTTTGGTATGCAAATGTTTGCCCGGTTTCAAGCCCAAGTCCCCAAATAATTGGAATTCTGGAGATTTTTCAGGTGGATGTGATAGAAAGTCATCAATCTCTGACAACAACAGCACGTTCTTGAGCTTAAAGATGATGAAAGTTGGAGAGGCAGAGTTACCACCGTTCGATGTGGACAGCGAAACAGAATGCGGGAAGGAGTGCCTCGAGAACCCCCAGTGCCGGGCTTACTCGTATGCCGTTCTAGCTGAAGACAGAGCTCAAAGGAGCACTACTACTACCAACACTTCCTCGTGCTGGACATGGTTGGAAGATCTAAATAATCTTGTAGAAGAGTATGGCAGGGGCCACAATATCTCTGTTCGAGTTGCCTCGTCTGATATAGAATCTACTGTAAGAGACTGTGAGCCTTGTGGCACAACGATGATACCCTATCCCCTGAGCACCGGAGTGGACTGTGGTGACCCCATGTACTTCCGTTTCAACTGCAACACTTTGACAGGCCAGGTTAGCTTCATGAATGACACCTTTAGAGTTATAAGCATCGAACCAAGTATGCAAAAATTTGTACTCAAAGGGTTGCCAGTCAAAGAGTTCGGGATCGATAAGTGTGATCTTAGAAACAGAGTCAAAACTCCGCAGCTCAACAGATCGTTCCCATTTAAGATAAGTAGCCCATTTAAGATAAGTAGTCGGTGCGATGCTGACCTTGGAGACTCTAGTTCTGAAGTATTTTCTTCTGGAGTCCTTGATGTAGTAGTGTTGGGTTGGGAACCACCGCTGGAACCAGCATGCAATACATCAGCAGACTGCAAGGGTTGGCCAAATTCAACCTGCAATCCAGCAAGAGATGAAATGAAAAGATGCTTTGCAACGATAGTGTTCAATGGAATTCTTCTAACTTCAATTGTACTCAAGAAAGTAGTCTTCATGAGCCATCAAACCCTCCATCGCAATTGTCCTCAGGAGAGCATTCAAACAGAAAAGTTTCATTCTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

808

Amino Acids

90.65

Weight (kDa)

8.11

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 246 - 341 1.1e-25 D-mannose binding lectin
S_locus_glycop PF00954 378 - 489 7.5e-22 S-locus glycoprotein domain
PAN_2 PF08276 510 - 583 3.2e-07 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000412)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230 AT4G03230
fragaria_vesca FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44243 FvH4_6g44244 FvH4_6g44245 FvH4_6g44245 FvH4_6g44260
malus_domestica MD04G1084700.v1.1 MD09G1099700.v1.1 MD09G1099800.v1.1 MD09G1099900.v1.1 MD09G1100000.v1.1 MD09G1100100.v1.1 MD17G1087900.v1.1
prunus_persica Prupe.3G226000_v2.0.a1 Prupe.3G226200_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226300_v2.0.a1 Prupe.3G226600_v2.0.a1 Prupe.3G226700_v2.0.a1
pyrus_communis pycom02g23070 pycom07g15320 pycom09g02310 pycom09g02330 pycom09g02340 pycom09g02350 pycom09g02360 pycom09g02400 pycom09g02410 pycom09g02430 pycom10g07020 pycom17g08490
rosa_chinensis RchiOBHm_Chr1g0328701 RchiOBHm_Chr2g0161021 RchiOBHm_Chr2g0161031 RchiOBHm_Chr2g0161081 RchiOBHm_Chr2g0161101
rosa_laevigata RLG00000021249 RLG00000021250 RLG00000021251 RLG00000021253 RLG00000021257 RLG00000029922
rosa_multiflora Rmu_sc0000955.1_g000023 Rmu_sc0000955.1_g000025 Rmu_sc0000955.1_g000041 Rmu_sc0002312.1_g000012 Rmu_sc0002481.1_g000021 Rmu_sc0002481.1_g000026 Rmu_sc0002481.1_g000028 Rmu_sc0002481.1_g000039 Rmu_sc0006420.1_g000017
rosa_roxburghii Rroxscaffold_2G00089160 Rroxscaffold_2G00089200 Rroxscaffold_2G00089220 Rroxscaffold_2G00089270 Rroxscaffold_2G00089300 Rroxscaffold_4G00321430
rosa_rugosa Rorug02G0485900 Rorug02G0486100 Rorug03G0345100
rosa_samantha Rh1AG094100 Rh1DG097200 Rh2AG552000 Rh2AG552100 Rh2AG552200 Rh2AG552300 Rh2AG552500 Rh2BG566400 Rh2BG566500 Rh2CG535800 Rh2CG535900 Rh2CG536100 Rh2CG536200 Rh2DG575000 Rh2DG575100 Rh2DG575400 Rh2DG575500 Rh2DG575600 Rh4AG077200 Rh4CG082400
rosa_wichuraiana Rw2G045690 Rw2G045700 Rw2G045710 Rw4G006230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1964
AasI GACNNNNNNGTC 1 cut(s) 181
Acc16I TGCGCA 1 cut(s) 1112
Acc36I ACCTGC 1 cut(s) 2267
AccB7I CCANNNNNTGG 1 cut(s) 823
AccI GTMKAC 1 cut(s) 1234
AciI CCGC 5 cut(s) 222, 238, 1617, 2063, 2204
AclWI GGATC 5 cut(s) 46, 120, 454, 467, 2033
AcoI YGGCCR 1 cut(s) 2246
AcuI CTGAAG 3 cut(s) 1203, 1695, 2172
AcvI CACGTG 1 cut(s) 820
AfaI GTAC 5 cut(s) 322, 525, 1898, 1995, 2337
AfiI CCNNNNNNNGG 7 cut(s) 773, 823, 1057, 1058, 1647, 1648, 1722
AflIII ACRYGT 2 cut(s) 323, 819
AgeI ACCGGT 1 cut(s) 1095
AjnI CCWGG 6 cut(s) 4, 772, 915, 994, 1147, 1929
AleI CACNNNNGTG 1 cut(s) 1874
AloI GAACNNNNNNTCC 2 cut(s) 115, 147
Alw21I GWGCWC 4 cut(s) 35, 1687, 1697, 1871
Alw26I GTCTC 7 cut(s) 167, 236, 1032, 1048, 1137, 1818, 2133
Alw44I GTGCAC 1 cut(s) 31
AlwI GGATC 5 cut(s) 46, 120, 454, 467, 2033
Ama87I CYCGRG 3 cut(s) 682, 1051, 1631
AoxI GGCC 5 cut(s) 582, 1424, 1771, 1927, 2246
ApaLI GTGCAC 1 cut(s) 31
ApeKI GCWGC 7 cut(s) 87, 944, 1212, 1215, 1218, 1357, 2065
AseI ATTAAT 1 cut(s) 1245
AsiGI ACCGGT 1 cut(s) 1095
Asp700I GAANNNNTTC 3 cut(s) 311, 871, 2412
AspLEI GCGC 2 cut(s) 689, 1113
AspS9I GGNCC 2 cut(s) 852, 1771
AsuC2I CCSGG 3 cut(s) 1059, 1449, 1649
AsuHPI GGTGA 4 cut(s) 54, 434, 1294, 1898
AsuII TTCGAA 1 cut(s) 164
AsuNHI GCTAGC 1 cut(s) 1190
AvaI CYCGRG 3 cut(s) 682, 1051, 1631
AvaII GGWCC 1 cut(s) 852
AxyI CCTNAGG 1 cut(s) 2388
BaeGI GKGCMC 1 cut(s) 35
BalI TGGCCA 1 cut(s) 2248
BamHI GGATCC 1 cut(s) 459
BanII GRGCYC 1 cut(s) 1687
BauI CACGAG 1 cut(s) 1717
BbrPI CACGTG 1 cut(s) 820
BbsI GAAGAC 3 cut(s) 870, 1683, 2344
Bbv12I GWGCWC 4 cut(s) 35, 1687, 1697, 1871
BbvI GCAGC 7 cut(s) 99, 956, 1224, 1227, 1230, 1369, 2077
BccI CCATC 5 cut(s) 800, 934, 1246, 2370, 2382
BceAI ACGGC 2 cut(s) 13, 1649
BciT130I CCWGG 6 cut(s) 6, 774, 917, 996, 1149, 1931
BclI TGATCA 1 cut(s) 934
BcnI CCSGG 3 cut(s) 1059, 1449, 1649
BcoDI GTCTC 7 cut(s) 167, 236, 1032, 1048, 1137, 1818, 2133
BfaI CTAG 3 cut(s) 1191, 1670, 2145
BfmI CTRYAG 1 cut(s) 666
BfoI RGCGCY 1 cut(s) 690
BfuAI ACCTGC 1 cut(s) 2267
BglII AGATCT 1 cut(s) 1738
BisI GCNGC 8 cut(s) 88, 223, 945, 1213, 1216, 1219, 1358, 2066
BlsI GCNGC 8 cut(s) 89, 224, 946, 1214, 1217, 1220, 1359, 2067
Bme1390I CCNGG 9 cut(s) 6, 774, 917, 996, 1059, 1149, 1449, 1649, 1931
Bme18I GGWCC 1 cut(s) 852
BmeT110I CYCGRG 3 cut(s) 682, 1051, 1631
BmgT120I GGNCC 2 cut(s) 852, 1771
BmiI GGNNCC 4 cut(s) 461, 1772, 2199, 2211
BmrFI CCNGG 9 cut(s) 6, 774, 917, 996, 1059, 1149, 1449, 1649, 1931
BmrI ACTGGG 1 cut(s) 1636
BmsI GCATC 4 cut(s) 990, 1977, 2116, 2279
BmtI GCTAGC 1 cut(s) 1194
BmuI ACTGGG 1 cut(s) 1636
BoxI GACNNNNGTC 2 cut(s) 248, 429
BpiI GAAGAC 3 cut(s) 870, 1683, 2344
BpmI CTGGAG 7 cut(s) 125, 191, 807, 858, 1317, 1506, 2187
Bpu10I CCTNAGC 1 cut(s) 1865
Bpu14I TTCGAA 1 cut(s) 164
BpuEI CTTGAG 3 cut(s) 121, 1567, 2324
BpuMI CCSGG 3 cut(s) 1059, 1449, 1649
Bsa29I ATCGAT 1 cut(s) 2028
BsaAI YACGTR 1 cut(s) 820
BsaBI GATNNNNATC 2 cut(s) 76, 933
BsaI GGTCTC 3 cut(s) 236, 1048, 1137
BsaJI CCNNGG 5 cut(s) 5, 995, 1058, 1147, 2134
BsaWI WCCGGW 3 cut(s) 245, 1095, 1871
BsaXI ACNNNNNCTCC 4 cut(s) 115, 145, 164, 194
Bsc4I CCNNNNNNNGG 7 cut(s) 773, 823, 1057, 1058, 1647, 1648, 1722
Bse118I RCCGGY 1 cut(s) 1095
Bse1I ACTGG 7 cut(s) 129, 790, 841, 1136, 1300, 1642, 2009
Bse21I CCTNAGG 1 cut(s) 2388
Bse3DI GCAATG 1 cut(s) 363
Bse8I GATNNNNATC 2 cut(s) 76, 933
BseBI CCWGG 6 cut(s) 6, 774, 917, 996, 1149, 1931
BseCI ATCGAT 1 cut(s) 2028
BseDI CCNNGG 5 cut(s) 5, 995, 1058, 1147, 2134
BseGI GGATG 3 cut(s) 315, 1005, 1508
BseJI GATNNNNATC 2 cut(s) 76, 933
BseLI CCNNNNNNNGG 7 cut(s) 773, 823, 1057, 1058, 1647, 1648, 1722
BseMI GCAATG 1 cut(s) 363
BseMII CTCAG 2 cut(s) 1856, 2402
BseNI ACTGG 7 cut(s) 129, 790, 841, 1136, 1300, 1642, 2009
BseSI GKGCMC 1 cut(s) 35
BseXI GCAGC 7 cut(s) 99, 956, 1224, 1227, 1230, 1369, 2077
BsgI GTGCAG 1 cut(s) 1393
Bsh1285I CGRYCG 2 cut(s) 94, 589
BshFI GGCC 5 cut(s) 584, 1426, 1773, 1929, 2248
BshTI ACCGGT 1 cut(s) 1095
BshVI ATCGAT 1 cut(s) 2028
BsiEI CGRYCG 2 cut(s) 94, 589
BsiHKAI GWGCWC 4 cut(s) 35, 1687, 1697, 1871
BsiHKCI CYCGRG 3 cut(s) 682, 1051, 1631
BsiSI CCGG 6 cut(s) 246, 1058, 1096, 1449, 1648, 1872
BslFI GGGAC 2 cut(s) 110, 1450
BslI CCNNNNNNNGG 7 cut(s) 773, 823, 1057, 1058, 1647, 1648, 1722
BsmAI GTCTC 7 cut(s) 167, 236, 1032, 1048, 1137, 1818, 2133
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 2 cut(s) 110, 1450
BsmI GAATGC 2 cut(s) 1619, 2397
BsnI GGCC 5 cut(s) 584, 1426, 1773, 1929, 2248
Bso31I GGTCTC 3 cut(s) 236, 1048, 1137
BsoBI CYCGRG 3 cut(s) 682, 1051, 1631
Bsp119I TTCGAA 1 cut(s) 164
Bsp1286I GDGCHC 4 cut(s) 35, 1687, 1697, 1871
BspACI CCGC 5 cut(s) 222, 238, 1617, 2063, 2204
BspANI GGCC 5 cut(s) 584, 1426, 1773, 1929, 2248
BspCNI CTCAG 2 cut(s) 1857, 2401
BspDI ATCGAT 1 cut(s) 2028
BspHI TCATGA 2 cut(s) 1941, 2355
BspLI GGNNCC 4 cut(s) 461, 1772, 2199, 2211
BspMI ACCTGC 1 cut(s) 2267
BspOI GCTAGC 1 cut(s) 1194
BspPI GGATC 5 cut(s) 46, 120, 454, 467, 2033
BspT104I TTCGAA 1 cut(s) 164
BspTNI GGTCTC 3 cut(s) 236, 1048, 1137
BsrDI GCAATG 1 cut(s) 363
BsrFI RCCGGY 1 cut(s) 1095
BsrI ACTGG 7 cut(s) 129, 790, 841, 1136, 1300, 1642, 2009
BssAI RCCGGY 1 cut(s) 1095
BssECI CCNNGG 5 cut(s) 5, 995, 1058, 1147, 2134
BssSI CACGAG 1 cut(s) 1717
BssT1I CCWWGG 1 cut(s) 2134
Bst2BI CACGAG 1 cut(s) 1717
Bst2UI CCWGG 6 cut(s) 6, 774, 917, 996, 1149, 1931
Bst4CI ACNGT 8 cut(s) 230, 739, 1278, 1308, 1590, 1819, 1829, 1883
Bst6I CTCTTC 3 cut(s) 108, 140, 1752
BstBAI YACGTR 1 cut(s) 820
BstBI TTCGAA 1 cut(s) 164
BstC8I GCNNGC 3 cut(s) 1192, 1196, 2218
BstDEI CTNAG 3 cut(s) 1865, 2042, 2388
BstEII GGTNACC 2 cut(s) 809, 1886
BstF5I GGATG 3 cut(s) 315, 1005, 1508
BstH2I RGCGCY 1 cut(s) 690
BstHHI GCGC 2 cut(s) 689, 1113
BstMAI GTCTC 7 cut(s) 167, 236, 1032, 1048, 1137, 1818, 2133
BstMCI CGRYCG 2 cut(s) 94, 589
BstMWI GCNNNNNNNGC 5 cut(s) 166, 693, 1218, 1670, 1935
BstNI CCWGG 6 cut(s) 6, 774, 917, 996, 1149, 1931
BstNSI RCATGY 2 cut(s) 327, 2220
BstPAI GACNNNNGTC 2 cut(s) 248, 429
BstPI GGTNACC 2 cut(s) 809, 1886
BstSCI CCNGG 9 cut(s) 4, 772, 915, 994, 1057, 1147, 1447, 1647, 1929
BstSFI CTRYAG 1 cut(s) 666
BstSLI GKGCMC 1 cut(s) 35
BstV1I GCAGC 7 cut(s) 99, 956, 1224, 1227, 1230, 1369, 2077
BstV2I GAAGAC 3 cut(s) 870, 1683, 2344
BstX2I RGATCY 3 cut(s) 125, 459, 1738
BstXI CCANNNNNNTGG 2 cut(s) 471, 1476
BstYI RGATCY 3 cut(s) 125, 459, 1738
Bsu15I ATCGAT 1 cut(s) 2028
Bsu36I CCTNAGG 1 cut(s) 2388
BsuRI GGCC 5 cut(s) 584, 1426, 1773, 1929, 2248
BsuTUI ATCGAT 1 cut(s) 2028
BtgZI GCGATG 2 cut(s) 2139, 2360
BtsCI GGATG 3 cut(s) 315, 1005, 1508
BtsI GCAGTG 2 cut(s) 1343, 1381
BtsIMutI CAGTG 8 cut(s) 235, 572, 783, 1221, 1343, 1376, 1381, 1649
BveI ACCTGC 1 cut(s) 2267
Cac8I GCNNGC 3 cut(s) 1192, 1196, 2218
CciI TCATGA 2 cut(s) 1941, 2355
CfoI GCGC 2 cut(s) 689, 1113
Cfr10I RCCGGY 1 cut(s) 1095
Cfr13I GGNCC 2 cut(s) 852, 1771
ClaI ATCGAT 1 cut(s) 2028
CseI GACGC 1 cut(s) 1342
CsiI ACCWGGT 1 cut(s) 915
Csp6I GTAC 5 cut(s) 321, 524, 1897, 1994, 2336
CspAI ACCGGT 1 cut(s) 1095
CspCI CAANNNNNGTGG 2 cut(s) 844, 879
CviAII CATG 9 cut(s) 324, 359, 886, 1350, 1728, 1894, 1942, 2217, 2356
CviQI GTAC 5 cut(s) 321, 524, 1897, 1994, 2336
DdeI CTNAG 3 cut(s) 1865, 2042, 2388
DrdI GACNNNNNNGTC 1 cut(s) 181
DseDI GACNNNNNNGTC 1 cut(s) 181
EaeI YGGCCR 1 cut(s) 2246
Eam1104I CTCTTC 3 cut(s) 108, 140, 1752
EarI CTCTTC 3 cut(s) 108, 140, 1752
Ecl136II GAGCTC 1 cut(s) 1685
Eco130I CCWWGG 1 cut(s) 2134
Eco24I GRGCYC 1 cut(s) 1687
Eco31I GGTCTC 3 cut(s) 236, 1048, 1137
Eco47I GGWCC 1 cut(s) 852
Eco53kI GAGCTC 1 cut(s) 1685
Eco57I CTGAAG 3 cut(s) 1203, 1695, 2172
Eco72I CACGTG 1 cut(s) 820
Eco81I CCTNAGG 1 cut(s) 2388
Eco88I CYCGRG 3 cut(s) 682, 1051, 1631
Eco91I GGTNACC 2 cut(s) 809, 1886
EcoICRI GAGCTC 1 cut(s) 1685
EcoO65I GGTNACC 2 cut(s) 809, 1886
EcoRI GAATTC 2 cut(s) 1480, 2316
EcoRII CCWGG 6 cut(s) 4, 772, 915, 994, 1147, 1929
EcoT14I CCWWGG 1 cut(s) 2134
EcoT38I GRGCYC 1 cut(s) 1687
ErhI CCWWGG 1 cut(s) 2134
Esp3I CGTCTC 1 cut(s) 167
FaeI CATG 9 cut(s) 327, 362, 889, 1353, 1731, 1897, 1945, 2220, 2359
FaqI GGGAC 2 cut(s) 110, 1450
FatI CATG 9 cut(s) 323, 358, 885, 1349, 1727, 1893, 1941, 2216, 2355
FauI CCCGC 2 cut(s) 231, 1610
FauNDI CATATG 1 cut(s) 1168
FbaI TGATCA 1 cut(s) 934
FblI GTMKAC 1 cut(s) 1234
Fnu4HI GCNGC 8 cut(s) 88, 223, 945, 1213, 1216, 1219, 1358, 2066
FokI GGATG 3 cut(s) 302, 1012, 1515
FriOI GRGCYC 1 cut(s) 1687
Fsp4HI GCNGC 8 cut(s) 88, 223, 945, 1213, 1216, 1219, 1358, 2066
FspBI CTAG 3 cut(s) 1191, 1670, 2145
FspI TGCGCA 1 cut(s) 1112
GlaI GCGC 2 cut(s) 688, 1112
GluI GCNGC 8 cut(s) 88, 223, 945, 1213, 1216, 1219, 1358, 2066
GsuI CTGGAG 7 cut(s) 125, 191, 807, 858, 1317, 1506, 2187
HaeII RGCGCY 1 cut(s) 690
HaeIII GGCC 5 cut(s) 584, 1426, 1773, 1929, 2248
HapII CCGG 6 cut(s) 246, 1058, 1096, 1449, 1648, 1872
HgaI GACGC 1 cut(s) 1342
HhaI GCGC 2 cut(s) 689, 1113
Hin1II CATG 9 cut(s) 327, 362, 889, 1353, 1731, 1897, 1945, 2220, 2359
Hin6I GCGC 2 cut(s) 687, 1111
HinP1I GCGC 2 cut(s) 687, 1111
HincII GTYRAC 1 cut(s) 1026
HindII GTYRAC 1 cut(s) 1026
HpaII CCGG 6 cut(s) 246, 1058, 1096, 1449, 1648, 1872
HphI GGTGA 4 cut(s) 54, 434, 1294, 1898
Hpy166II GTNNAC 6 cut(s) 33, 855, 1026, 1235, 1600, 1879
Hpy8I GTNNAC 6 cut(s) 33, 855, 1026, 1235, 1600, 1879
Hpy99I CGWCG 2 cut(s) 50, 187
HpyAV CCTTC 5 cut(s) 46, 171, 1188, 1319, 1615
HpyCH4III ACNGT 8 cut(s) 230, 739, 1278, 1308, 1590, 1819, 1829, 1883
HpyCH4IV ACGT 2 cut(s) 819, 1541
HpyF10VI GCNNNNNNNGC 5 cut(s) 166, 693, 1218, 1670, 1935
HpyF3I CTNAG 3 cut(s) 1865, 2042, 2388
HpySE526I ACGT 2 cut(s) 819, 1541
Hsp92II CATG 9 cut(s) 327, 362, 889, 1353, 1731, 1897, 1945, 2220, 2359
HspAI GCGC 2 cut(s) 687, 1111
Ksp22I TGATCA 1 cut(s) 934
LmnI GCTCC 1 cut(s) 1692
Lsp1109I GCAGC 7 cut(s) 99, 956, 1224, 1227, 1230, 1369, 2077
LweI GCATC 4 cut(s) 990, 1977, 2116, 2279
MabI ACCWGGT 1 cut(s) 915
MaeI CTAG 3 cut(s) 1191, 1670, 2145
MaeII ACGT 2 cut(s) 819, 1541
MaeIII GTNAC 9 cut(s) 287, 422, 677, 724, 809, 832, 1302, 1581, 1886
MfeI CAATTG 5 cut(s) 283, 351, 1254, 2331, 2380
MflI RGATCY 3 cut(s) 125, 459, 1738
MhlI GDGCHC 4 cut(s) 35, 1687, 1697, 1871
MlsI TGGCCA 1 cut(s) 2248
MluNI TGGCCA 1 cut(s) 2248
MlyI GAGTC 6 cut(s) 127, 258, 914, 2061, 2135, 2178
MmeI TCCRAC 5 cut(s) 101, 132, 804, 1549, 1713
Mox20I TGGCCA 1 cut(s) 2248
MroXI GAANNNNTTC 3 cut(s) 311, 871, 2412
MscI TGGCCA 1 cut(s) 2248
MslI CAYNNNNRTG 4 cut(s) 47, 890, 1847, 1874
Msp20I TGGCCA 1 cut(s) 2248
MspA1I CMGCKG 1 cut(s) 2206
MspI CCGG 6 cut(s) 246, 1058, 1096, 1449, 1648, 1872
MspR9I CCNGG 9 cut(s) 6, 774, 917, 996, 1059, 1149, 1449, 1649, 1931
MunI CAATTG 5 cut(s) 283, 351, 1254, 2331, 2380
Mva1269I GAATGC 2 cut(s) 1619, 2397
MvaI CCWGG 6 cut(s) 6, 774, 917, 996, 1149, 1931
MwoI GCNNNNNNNGC 5 cut(s) 166, 693, 1218, 1670, 1935
NciI CCSGG 3 cut(s) 1059, 1449, 1649
NdeI CATATG 1 cut(s) 1168
NheI GCTAGC 1 cut(s) 1190
NlaIII CATG 9 cut(s) 327, 362, 889, 1353, 1731, 1897, 1945, 2220, 2359
NlaIV GGNNCC 4 cut(s) 461, 1772, 2199, 2211
NmuCI GTSAC 2 cut(s) 422, 1886
NsbI TGCGCA 1 cut(s) 1112
NspI RCATGY 2 cut(s) 327, 2220
NspV TTCGAA 1 cut(s) 164
OliI CACNNNNGTG 1 cut(s) 1874
PaeI GCATGC 1 cut(s) 2220
PaeR7I CTCGAG 1 cut(s) 1631
PagI TCATGA 2 cut(s) 1941, 2355
PciI ACATGT 1 cut(s) 323
PcsI WCGNNNNNNNCGW 1 cut(s) 188
PctI GAATGC 2 cut(s) 1619, 2397
PdmI GAANNNNTTC 3 cut(s) 311, 871, 2412
PfeI GAWTC 5 cut(s) 212, 605, 929, 1289, 1811
PflFI GACNNNGTC 1 cut(s) 178
PflMI CCANNNNNTGG 1 cut(s) 823
PinAI ACCGGT 1 cut(s) 1095
PkrI GCNGC 8 cut(s) 89, 224, 946, 1214, 1217, 1220, 1359, 2067
Ple19I CGATCG 2 cut(s) 94, 589
PleI GAGTC 6 cut(s) 126, 257, 913, 2060, 2135, 2177
PmaCI CACGTG 1 cut(s) 820
PmlI CACGTG 1 cut(s) 820
PpsI GAGTC 6 cut(s) 126, 257, 913, 2060, 2135, 2177
Ppu21I YACGTR 1 cut(s) 820
PscI ACATGT 1 cut(s) 323
PshAI GACNNNNGTC 2 cut(s) 248, 429
PshBI ATTAAT 1 cut(s) 1245
PsiI TTATAA 1 cut(s) 1964
Psp124BI GAGCTC 1 cut(s) 1687
Psp6I CCWGG 6 cut(s) 4, 772, 915, 994, 1147, 1929
PspCI CACGTG 1 cut(s) 820
PspEI GGTNACC 2 cut(s) 809, 1886
PspGI CCWGG 6 cut(s) 4, 772, 915, 994, 1147, 1929
PspN4I GGNNCC 4 cut(s) 461, 1772, 2199, 2211
PspPI GGNCC 2 cut(s) 852, 1771
PsuI RGATCY 3 cut(s) 125, 459, 1738
PsyI GACNNNGTC 1 cut(s) 178
PvuI CGATCG 2 cut(s) 94, 589
RsaI GTAC 5 cut(s) 322, 525, 1898, 1995, 2337
RsaNI GTAC 5 cut(s) 321, 524, 1897, 1994, 2336
RseI CAYNNNNRTG 4 cut(s) 47, 890, 1847, 1874
SacI GAGCTC 1 cut(s) 1687
SatI GCNGC 8 cut(s) 88, 223, 945, 1213, 1216, 1219, 1358, 2066
Sau96I GGNCC 2 cut(s) 852, 1771
SchI GAGTC 6 cut(s) 127, 258, 914, 2061, 2135, 2178
ScrFI CCNGG 9 cut(s) 6, 774, 917, 996, 1059, 1149, 1449, 1649, 1931
SduI GDGCHC 4 cut(s) 35, 1687, 1697, 1871
SexAI ACCWGGT 1 cut(s) 915
SfaNI GCATC 4 cut(s) 990, 1977, 2116, 2279
SfcI CTRYAG 1 cut(s) 666
Sfr274I CTCGAG 1 cut(s) 1631
SfuI TTCGAA 1 cut(s) 164
SinI GGWCC 1 cut(s) 852
SlaI CTCGAG 1 cut(s) 1631
SmiMI CAYNNNNRTG 4 cut(s) 47, 890, 1847, 1874
SmlI CTYRAG 4 cut(s) 100, 1546, 1631, 2339
SmoI CTYRAG 4 cut(s) 100, 1546, 1631, 2339
SphI GCATGC 1 cut(s) 2220
SsiI CCGC 5 cut(s) 222, 238, 1617, 2063, 2204
SspI AATATT 1 cut(s) 952
SspMI CTAG 3 cut(s) 1191, 1670, 2145
SstI GAGCTC 1 cut(s) 1687
StyD4I CCNGG 9 cut(s) 4, 772, 915, 994, 1057, 1147, 1447, 1647, 1929
StyI CCWWGG 1 cut(s) 2134
TaaI ACNGT 8 cut(s) 230, 739, 1278, 1308, 1590, 1819, 1829, 1883
TaiI ACGT 2 cut(s) 822, 1544
TatI WGTACW 4 cut(s) 523, 1896, 1993, 2335
TauI GCSGC 1 cut(s) 225
TfiI GAWTC 5 cut(s) 212, 605, 929, 1289, 1811
TscAI CASTG 8 cut(s) 235, 579, 790, 1228, 1343, 1376, 1381, 1649
TseFI GTSAC 2 cut(s) 422, 1886
TseI GCWGC 7 cut(s) 87, 944, 1212, 1215, 1218, 1357, 2065
Tsp45I GTSAC 2 cut(s) 422, 1886
TspGWI ACGGA 2 cut(s) 308, 1892
TspRI CASTG 8 cut(s) 235, 579, 790, 1228, 1343, 1376, 1381, 1649
Tth111I GACNNNGTC 1 cut(s) 178
Van91I CCANNNNNTGG 1 cut(s) 823
VneI GTGCAC 1 cut(s) 31
VpaK11BI GGWCC 1 cut(s) 852
VspI ATTAAT 1 cut(s) 1245
XceI RCATGY 2 cut(s) 327, 2220
XhoI CTCGAG 1 cut(s) 1631
XmiI GTMKAC 1 cut(s) 1234
XmnI GAANNNNTTC 3 cut(s) 311, 871, 2412
XspI CTAG 3 cut(s) 1191, 1670, 2145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.