Prupe.1G244600_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
25806952 .. 25807470
519 bp
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UTR
Exon/CDS
Intron
Prupe.1G244600.1

Sequence Viewer

Length: 369 bp
ATGGGTTTTACCAAAAAAAGAATTATTGAGCCAAGTGAGATGCTCTTACAACTGAGCTATGAACTCGTTCATTTTCTTAAAGTTGTTGCTGAGCATGCACACAGCTACTCGGAAGTTTTGAGTAATGGAAGATATAAGAGCGCGGACCGCATCCACAGGGCAGTGACCAACATAGTTGAGGCAAGGTTGTCATTAGCAATGTTCTATGGACCCAACAAGAACACAGTGATTGGTCCAATTGAGGATTTGATTGACGAGGAACACCCTCCATTGTACCGGAGCTATAAGTATGCAGAGTTTTTTGAAGAATTCTTCAAGCAAGAAGGAAAAAGAAGATTAGTGAAGGAAGCTTTTGAGTTGCACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

123

Amino Acids

14.35

Weight (kDa)

6.59

Isoelectric Point (pI)

49.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000863)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29436 FvH4_4g08647
prunus_persica Prupe.1G244600_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0041081 RchiOBHm_Chr7g0227381
rosa_multiflora Rmu_co8094356.1_g000001 Rmu_co8097010.1_g000001 Rmu_co8307317.1_g000001 Rmu_co8331341.1_g000001 Rmu_co8353833.1_g000001 Rmu_co8426601.1_g000001 Rmu_co8464885.1_g000001 Rmu_sc0000161.1_g000045 Rmu_sc0000367.1_g000181 Rmu_sc0000438.1_g000020 Rmu_sc0000637.1_g000008 Rmu_sc0000706.1_g000036 Rmu_sc0000745.1_g000002 Rmu_sc0000964.1_g000007 Rmu_sc0001016.1_g000045 Rmu_sc0001190.1_g000046 Rmu_sc0002014.1_g000040 Rmu_sc0002229.1_g000012 Rmu_sc0002279.1_g000021 Rmu_sc0002279.1_g000049 Rmu_sc0002308.1_g000074 Rmu_sc0002482.1_g000017 Rmu_sc0002809.1_g000002 Rmu_sc0003147.1_g000020 Rmu_sc0003226.1_g000065 Rmu_sc0003246.1_g000004 Rmu_sc0003260.1_g000011 Rmu_sc0003441.1_g000081 Rmu_sc0003895.1_g000019 Rmu_sc0004228.1_g000001 Rmu_sc0004646.1_g000038 Rmu_sc0004688.1_g000018 Rmu_sc0005389.1_g000016 Rmu_sc0005537.1_g000011 Rmu_sc0005954.1_g000010 Rmu_sc0006021.1_g000020 Rmu_sc0006695.1_g000056 Rmu_sc0006822.1_g000010 Rmu_sc0007877.1_g000013 Rmu_sc0008049.1_g000067 Rmu_sc0008691.1_g000004 Rmu_sc0009206.1_g000002 Rmu_sc0011734.1_g000008 Rmu_sc0012136.1_g000012 Rmu_sc0012746.1_g000018 Rmu_sc0013612.1_g000011 Rmu_sc0016149.1_g000005 Rmu_sc0018867.1_g000011 Rmu_sc0020611.1_g000002 Rmu_sc0021291.1_g000004 Rmu_sc0021291.1_g000005 Rmu_sc0022400.1_g000007 Rmu_sc0025427.1_g000001 Rmu_sc0027953.1_g000002 Rmu_sc0033748.1_g000002 Rmu_ssc0000072.1_g000004 Rmu_ssc0000197.1_g000082
rosa_roxburghii Rroxscaffold_4G00282700 Rroxscaffold_5G00374470 Rroxscaffold_7G00183200
rosa_rugosa Rorug02G0187100 Rorug05G0255100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 143
AciI CCGC 2 cut(s) 143, 148
AcsI RAATTY 1 cut(s) 308
AfaI GTAC 1 cut(s) 275
AgsI TTSAA 2 cut(s) 305, 316
AluBI AGCT 4 cut(s) 57, 105, 282, 350
AluI AGCT 4 cut(s) 57, 105, 282, 350
ApoI RAATTY 1 cut(s) 308
Asp700I GAANNNNTTC 1 cut(s) 66
AspLEI GCGC 1 cut(s) 143
AspS9I GGNCC 3 cut(s) 145, 209, 233
AvaII GGWCC 3 cut(s) 145, 209, 233
BlpI GCTNAGC 1 cut(s) 90
Bme18I GGWCC 3 cut(s) 145, 209, 233
BmgT120I GGNCC 3 cut(s) 145, 209, 233
BmiI GGNNCC 1 cut(s) 211
BmsI GCATC 2 cut(s) 30, 159
Bpu1102I GCTNAGC 1 cut(s) 90
BsaWI WCCGGW 1 cut(s) 276
Bse3DI GCAATG 1 cut(s) 204
BseGI GGATG 1 cut(s) 150
BseMI GCAATG 1 cut(s) 204
BseMII CTCAG 2 cut(s) 44, 81
Bsh1236I CGCG 1 cut(s) 143
BsiSI CCGG 1 cut(s) 277
Bsp1720I GCTNAGC 1 cut(s) 90
BspACI CCGC 2 cut(s) 143, 148
BspCNI CTCAG 2 cut(s) 45, 82
BspFNI CGCG 1 cut(s) 143
BspLI GGNNCC 1 cut(s) 211
BsrDI GCAATG 1 cut(s) 204
Bst4CI ACNGT 1 cut(s) 226
BstC8I GCNNGC 1 cut(s) 96
BstDEI CTNAG 2 cut(s) 53, 90
BstF5I GGATG 1 cut(s) 150
BstFNI CGCG 1 cut(s) 143
BstHHI GCGC 1 cut(s) 143
BstMWI GCNNNNNNNGC 2 cut(s) 95, 147
BstNSI RCATGY 1 cut(s) 98
BstUI CGCG 1 cut(s) 143
BtsCI GGATG 1 cut(s) 150
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 2 cut(s) 168, 231
Cac8I GCNNGC 1 cut(s) 96
CfoI GCGC 1 cut(s) 143
Cfr13I GGNCC 3 cut(s) 145, 209, 233
CpoI CGGWCCG 1 cut(s) 145
Csp6I GTAC 1 cut(s) 274
CspI CGGWCCG 1 cut(s) 145
CviAII CATG 1 cut(s) 95
CviJI RGCY 5 cut(s) 31, 57, 105, 282, 350
CviKI_1 RGCY 5 cut(s) 31, 57, 105, 282, 350
CviQI GTAC 1 cut(s) 274
DdeI CTNAG 2 cut(s) 53, 90
Eco47I GGWCC 3 cut(s) 145, 209, 233
EcoRI GAATTC 1 cut(s) 308
FaeI CATG 1 cut(s) 98
FaiI YATR 7 cut(s) 60, 96, 135, 173, 207, 285, 291
FatI CATG 1 cut(s) 94
FokI GGATG 1 cut(s) 137
GlaI GCGC 1 cut(s) 142
HapII CCGG 1 cut(s) 277
HhaI GCGC 1 cut(s) 143
Hin1II CATG 1 cut(s) 98
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HindIII AAGCTT 1 cut(s) 348
HpaII CCGG 1 cut(s) 277
Hpy188I TCNGA 1 cut(s) 112
HpyAV CCTTC 2 cut(s) 317, 337
HpyCH4III ACNGT 1 cut(s) 226
HpyCH4V TGCA 3 cut(s) 98, 293, 361
HpyF10VI GCNNNNNNNGC 2 cut(s) 95, 147
HpyF3I CTNAG 2 cut(s) 53, 90
Hsp92II CATG 1 cut(s) 98
HspAI GCGC 1 cut(s) 141
LmnI GCTCC 1 cut(s) 279
LpnPI CCDG 2 cut(s) 142, 290
LweI GCATC 2 cut(s) 30, 159
MaeIII GTNAC 1 cut(s) 163
MboII GAAGA 4 cut(s) 141, 304, 317, 345
MfeI CAATTG 2 cut(s) 237, 364
MluCI AATT 4 cut(s) 21, 237, 308, 364
MnlI CCTC 4 cut(s) 172, 235, 250, 276
MroXI GAANNNNTTC 1 cut(s) 66
MseI TTAA 1 cut(s) 78
MspI CCGG 1 cut(s) 277
MunI CAATTG 2 cut(s) 237, 364
MvnI CGCG 1 cut(s) 143
MwoI GCNNNNNNNGC 2 cut(s) 95, 147
NlaIII CATG 1 cut(s) 98
NlaIV GGNNCC 1 cut(s) 211
NmuCI GTSAC 1 cut(s) 163
NspI RCATGY 1 cut(s) 98
PaeI GCATGC 1 cut(s) 98
PdmI GAANNNNTTC 1 cut(s) 66
PspN4I GGNNCC 1 cut(s) 211
PspPI GGNCC 3 cut(s) 145, 209, 233
RsaI GTAC 1 cut(s) 275
RsaNI GTAC 1 cut(s) 274
Rsr2I CGGWCCG 1 cut(s) 145
RsrII CGGWCCG 1 cut(s) 145
SaqAI TTAA 1 cut(s) 78
Sau96I GGNCC 3 cut(s) 145, 209, 233
SetI ASST 5 cut(s) 59, 107, 188, 284, 352
SfaNI GCATC 2 cut(s) 30, 159
SinI GGWCC 3 cut(s) 145, 209, 233
SphI GCATGC 1 cut(s) 98
Sse9I AATT 4 cut(s) 21, 237, 308, 364
SsiI CCGC 2 cut(s) 143, 148
TaaI ACNGT 1 cut(s) 226
TasI AATT 4 cut(s) 21, 237, 308, 364
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
TscAI CASTG 2 cut(s) 168, 231
TseFI GTSAC 1 cut(s) 163
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 2 cut(s) 59, 75
TspRI CASTG 2 cut(s) 168, 231
VpaK11BI GGWCC 3 cut(s) 145, 209, 233
XapI RAATTY 1 cut(s) 308
XceI RCATGY 1 cut(s) 98
XmnI GAANNNNTTC 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.