Rorug05G0255100

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
28384178 .. 28413447
29270 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0255100.1

Sequence Viewer

Length: 1740 bp
ATGGGCATTCTTTCATTCATTTTCATTGGAGTTTACTTGTTAAAAATCTCAGCTTTAGCTCAATCCACTTCCAGCCATGGCGGCTATGAATTGGGTTTCTTGAGTAGACCAAAGGGTGTTCATAGGAGGAGTCTTTTGGCCTCGACTTCTGGAGACTCTTGTGACAATAGTCATTATTGTGGCCCGAATGGAATGTGTGTCATCACCAATGCACCGGCATGTACTAGTTTAAATGGGTTTAAACCCAAGGCACCAGAAAAATATAACTATGGGGACAACTCAGGTGGTTGTGTCCGGGCTCAACTTTCCAACTGCCAAAACAAGGATGATGGGTTTGAGATATATGCTGGGGTCAAATTGCCAGATACCACAGATTCTCGGGCTAACCAGAGTATGAGTGTCGAGGACTGCAGGGAAAATTGCTTGAACAACTGCTCTTGTGTGGCTTATGCAAGCTCTAATGTCAACGGCTGTACTATCTGGTTTGGTGATTTAATCAACATTAGGACTCTTTTTGGTGGTGGGGAGGATCTGTACATTCGGACACCTGCTTCAGAATTAAAGAAAAACCACTCACCTAAGACAAAGATAGCGGTGATCGTTGCATCTGTTGTTGCGGTTGTCATTGGGATGCTCTTGGTTGCTTATTGCATTCACAGGAGGAGAACAAAGTTCAAAGAGAAAATGGGAAAGAATGGAATGACGAATCAGAACAATGACGGACAGAACGAAGACATCGAGCTACCAATATTTAGTTTGTCCACAATAGTCACAGCCACTGATAACTTTTCATTCAACACGAAACTTGGAGAAGGTGGCTTTGGGACTGTATACAAGGGTAGTCTAGTGGATGGGCAAGAAATTGCTGTGAAGAGGCTCTCACGAAGTTCAGGGCAAGGACCAACTGAGTTCAAAAATGAAGTACTACTAATAGCCAAACTTCAGCACCGAAATCTTGTAAGGCTCCTAGGTTGTTGCATTGAGGGAGAAGAGAGATTGTTGATTTATGAATACATGCCCAACAACAGCTTGGACTTCTACCTTTTTGATGAAAATCGAGCAAGACTATTGGCTTGGCCTCAACGCTTTCACATTATCTGTGGGATAGCCAGAGGTCTTCTTTATCTACATCAAGATTCCAGATTGCGGATTATTCATAGAGATCTTAAAGCAAGTAATGTTTTGCTTGATAAGGAGATGAACCCAAAAATCTCAGACTTCGGCATGGCTAGAACATTTGGAGGAGATCAGACTGAAGGAGTTACAAGAAGAGTTGTTGGAACCTATGGTTATATGGCACCAGAATATGCAATTGATGGTCAATTCTCTGTAAAATCCGACGTTTTTAGTTTTGGCATTTTATTGTTGGAAACATTAAGCGGGAAGAGAAGTAGAGGATTTCATGATCCTGTTGATAACCTTAACCTCATTGGACATGCATGGAAGTTATGGAATGCAGGACGGCCATTAGAACTGATAGATGAAGGGTTTGGAGAGTCCTGCAACTTATCGGAGGTGTTGCGATGCATCCATGTTAGTCTCTTGTGTGTACAACAACAGCCTAAAGACAGGCCGACCATGGCATCTGTAGTTCAGATGTTATGTAGTAATGGTGCCTTGCCTCAACCTAAAGAACCAGGGTTCTTTTCAGAGAAAGATTTGGCTGAAGGAGGCTTTCCCTCTGTTAACAACGAAACGTCTTCTAATGGATTAACCATTGCCCTACTCGAGGCTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

579

Amino Acids

63.67

Weight (kDa)

7.15

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 47 - 83 1.7e-06 S-locus glycoprotein domain
PAN_2 PF08276 105 - 168 2.2e-18 PAN-like domain
PK_Tyr_Ser-Thr PF07714 264 - 534 3.2e-49 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 264 - 532 2.6e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000863)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29436 FvH4_4g08647
prunus_persica Prupe.1G244600_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0041081 RchiOBHm_Chr7g0227381
rosa_multiflora Rmu_co8094356.1_g000001 Rmu_co8097010.1_g000001 Rmu_co8307317.1_g000001 Rmu_co8331341.1_g000001 Rmu_co8353833.1_g000001 Rmu_co8426601.1_g000001 Rmu_co8464885.1_g000001 Rmu_sc0000161.1_g000045 Rmu_sc0000367.1_g000181 Rmu_sc0000438.1_g000020 Rmu_sc0000637.1_g000008 Rmu_sc0000706.1_g000036 Rmu_sc0000745.1_g000002 Rmu_sc0000964.1_g000007 Rmu_sc0001016.1_g000045 Rmu_sc0001190.1_g000046 Rmu_sc0002014.1_g000040 Rmu_sc0002229.1_g000012 Rmu_sc0002279.1_g000021 Rmu_sc0002279.1_g000049 Rmu_sc0002308.1_g000074 Rmu_sc0002482.1_g000017 Rmu_sc0002809.1_g000002 Rmu_sc0003147.1_g000020 Rmu_sc0003226.1_g000065 Rmu_sc0003246.1_g000004 Rmu_sc0003260.1_g000011 Rmu_sc0003441.1_g000081 Rmu_sc0003895.1_g000019 Rmu_sc0004228.1_g000001 Rmu_sc0004646.1_g000038 Rmu_sc0004688.1_g000018 Rmu_sc0005389.1_g000016 Rmu_sc0005537.1_g000011 Rmu_sc0005954.1_g000010 Rmu_sc0006021.1_g000020 Rmu_sc0006695.1_g000056 Rmu_sc0006822.1_g000010 Rmu_sc0007877.1_g000013 Rmu_sc0008049.1_g000067 Rmu_sc0008691.1_g000004 Rmu_sc0009206.1_g000002 Rmu_sc0011734.1_g000008 Rmu_sc0012136.1_g000012 Rmu_sc0012746.1_g000018 Rmu_sc0013612.1_g000011 Rmu_sc0016149.1_g000005 Rmu_sc0018867.1_g000011 Rmu_sc0020611.1_g000002 Rmu_sc0021291.1_g000004 Rmu_sc0021291.1_g000005 Rmu_sc0022400.1_g000007 Rmu_sc0025427.1_g000001 Rmu_sc0027953.1_g000002 Rmu_sc0033748.1_g000002 Rmu_ssc0000072.1_g000004 Rmu_ssc0000197.1_g000082
rosa_roxburghii Rroxscaffold_4G00282700 Rroxscaffold_5G00374470 Rroxscaffold_7G00183200
rosa_rugosa Rorug02G0187100 Rorug05G0255100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 556
Acc36I ACCTGC 1 cut(s) 556
AccB1I GGYRCC 3 cut(s) 250, 1297, 1613
AccI GTMKAC 2 cut(s) 106, 831
AciI CCGC 5 cut(s) 81, 593, 617, 1147, 1380
AclWI GGATC 2 cut(s) 537, 1400
AcoI YGGCCR 1 cut(s) 1463
AcuI CTGAAG 4 cut(s) 537, 926, 1275, 1686
AfaI GTAC 5 cut(s) 223, 475, 536, 924, 1551
AfiI CCNNNNNNNGG 3 cut(s) 322, 1146, 1729
AgsI TTSAA 4 cut(s) 427, 676, 796, 913
AhlI ACTAGT 1 cut(s) 224
AjnI CCWGG 1 cut(s) 1636
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AluBI AGCT 5 cut(s) 53, 59, 456, 742, 1029
AluI AGCT 5 cut(s) 53, 59, 456, 742, 1029
Alw26I GTCTC 2 cut(s) 147, 1544
AlwI GGATC 2 cut(s) 537, 1400
AlwNI CAGNNNCTG 1 cut(s) 779
Ama87I CYCGRG 2 cut(s) 378, 1727
AoxI GGCC 5 cut(s) 138, 181, 1076, 1463, 1571
AspA2I CCTAGG 1 cut(s) 967
AspS9I GGNCC 2 cut(s) 182, 899
AsuC2I CCSGG 1 cut(s) 296
AsuHPI GGTGA 4 cut(s) 196, 500, 567, 607
AvaI CYCGRG 2 cut(s) 378, 1727
AvaII GGWCC 1 cut(s) 899
AvrII CCTAGG 1 cut(s) 967
BanI GGYRCC 3 cut(s) 250, 1297, 1613
BanII GRGCYC 1 cut(s) 301
BbsI GAAGAC 3 cut(s) 738, 1109, 1692
BccI CCATC 3 cut(s) 323, 845, 1310
BceAI ACGGC 2 cut(s) 484, 1478
BciT130I CCWGG 1 cut(s) 1638
BcnI CCSGG 1 cut(s) 296
BcoDI GTCTC 2 cut(s) 147, 1544
BcuI ACTAGT 1 cut(s) 224
BfaI CTAG 4 cut(s) 225, 845, 968, 1230
BfmI CTRYAG 2 cut(s) 409, 1587
BfuAI ACCTGC 1 cut(s) 556
BglI GCCNNNNNGGC 1 cut(s) 81
BglII AGATCT 1 cut(s) 1162
BisI GCNGC 1 cut(s) 82
BlnI CCTAGG 1 cut(s) 967
BlsI GCNGC 1 cut(s) 83
BmcAI AGTACT 1 cut(s) 924
Bme1390I CCNGG 2 cut(s) 296, 1638
Bme18I GGWCC 1 cut(s) 899
BmeT110I CYCGRG 2 cut(s) 378, 1727
BmgT120I GGNCC 2 cut(s) 182, 899
BmiI GGNNCC 5 cut(s) 252, 965, 1282, 1299, 1615
BmrFI CCNGG 2 cut(s) 296, 1638
BmsI GCATC 5 cut(s) 614, 621, 1514, 1536, 1592
BoxI GACNNNNGTC 1 cut(s) 168
BpiI GAAGAC 3 cut(s) 738, 1109, 1692
BpmI CTGGAG 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 121
BpuMI CCSGG 1 cut(s) 296
BsaBI GATNNNNATC 1 cut(s) 1053
BsaJI CCNNGG 5 cut(s) 76, 246, 967, 1578, 1637
BsaXI ACNNNNNCTCC 2 cut(s) 518, 548
Bsc4I CCNNNNNNNGG 3 cut(s) 322, 1146, 1729
Bse118I RCCGGY 1 cut(s) 214
Bse3DI GCAATG 1 cut(s) 1716
Bse8I GATNNNNATC 1 cut(s) 1053
BseBI CCWGG 1 cut(s) 1638
BseDI CCNNGG 5 cut(s) 76, 246, 967, 1578, 1637
BseGI GGATG 4 cut(s) 331, 636, 856, 1527
BseJI GATNNNNATC 1 cut(s) 1053
BseLI CCNNNNNNNGG 3 cut(s) 322, 1146, 1729
BseMI GCAATG 1 cut(s) 1716
BseMII CTCAG 4 cut(s) 63, 294, 897, 1227
BseRI GAGGAG 3 cut(s) 142, 676, 1257
BseYI CCCAGC 1 cut(s) 347
BshFI GGCC 5 cut(s) 140, 183, 1078, 1465, 1573
BshNI GGYRCC 3 cut(s) 250, 1297, 1613
BsiHKCI CYCGRG 2 cut(s) 378, 1727
BsiSI CCGG 2 cut(s) 215, 295
BslFI GGGAC 2 cut(s) 287, 838
BslI CCNNNNNNNGG 3 cut(s) 322, 1146, 1729
BsmAI GTCTC 2 cut(s) 147, 1544
BsmFI GGGAC 2 cut(s) 287, 838
BsmI GAATGC 3 cut(s) 6, 651, 1459
BsnI GGCC 5 cut(s) 140, 183, 1078, 1465, 1573
BsoBI CYCGRG 2 cut(s) 378, 1727
Bsp1286I GDGCHC 1 cut(s) 301
Bsp1407I TGTACA 2 cut(s) 534, 1549
Bsp143I GATC 5 cut(s) 529, 597, 1162, 1246, 1405
Bsp19I CCATGG 2 cut(s) 76, 1578
BspACI CCGC 5 cut(s) 81, 593, 617, 1147, 1380
BspANI GGCC 5 cut(s) 140, 183, 1078, 1465, 1573
BspCNI CTCAG 4 cut(s) 62, 293, 898, 1226
BspHI TCATGA 1 cut(s) 1402
BspLI GGNNCC 5 cut(s) 252, 965, 1282, 1299, 1615
BspMAI CTGCAG 1 cut(s) 413
BspMI ACCTGC 1 cut(s) 556
BspPI GGATC 2 cut(s) 537, 1400
BspT107I GGYRCC 3 cut(s) 250, 1297, 1613
BsrDI GCAATG 1 cut(s) 1716
BsrFI RCCGGY 1 cut(s) 214
BsrGI TGTACA 2 cut(s) 534, 1549
BssAI RCCGGY 1 cut(s) 214
BssECI CCNNGG 5 cut(s) 76, 246, 967, 1578, 1637
BssMI GATC 5 cut(s) 529, 597, 1162, 1246, 1405
BssNAI GTATAC 1 cut(s) 832
BssT1I CCWWGG 4 cut(s) 76, 246, 967, 1578
Bst1107I GTATAC 1 cut(s) 832
Bst2UI CCWGG 1 cut(s) 1638
Bst4CI ACNGT 1 cut(s) 829
Bst6I CTCTTC 4 cut(s) 866, 984, 1264, 1379
BstAUI TGTACA 2 cut(s) 534, 1549
BstC8I GCNNGC 1 cut(s) 454
BstDEI CTNAG 5 cut(s) 49, 280, 579, 906, 1213
BstDSI CCRYGG 2 cut(s) 76, 1578
BstENI CCTNNNNNAGG 1 cut(s) 1727
BstF5I GGATG 4 cut(s) 331, 636, 856, 1527
BstKTI GATC 5 cut(s) 532, 600, 1165, 1249, 1408
BstMAI GTCTC 2 cut(s) 147, 1544
BstMBI GATC 5 cut(s) 529, 597, 1162, 1246, 1405
BstMWI GCNNNNNNNGC 1 cut(s) 81
BstNI CCWGG 1 cut(s) 1638
BstNSI RCATGY 3 cut(s) 222, 1018, 1439
BstPAI GACNNNNGTC 1 cut(s) 168
BstSCI CCNGG 2 cut(s) 294, 1636
BstSFI CTRYAG 2 cut(s) 409, 1587
BstV2I GAAGAC 3 cut(s) 738, 1109, 1692
BstX2I RGATCY 2 cut(s) 529, 1162
BstYI RGATCY 2 cut(s) 529, 1162
BstZ17I GTATAC 1 cut(s) 832
BsuRI GGCC 5 cut(s) 140, 183, 1078, 1465, 1573
BtgI CCRYGG 2 cut(s) 76, 1578
BtgZI GCGATG 1 cut(s) 1537
BtsCI GGATG 4 cut(s) 331, 636, 856, 1527
BtsIMutI CAGTG 1 cut(s) 777
BveI ACCTGC 1 cut(s) 556
Cac8I GCNNGC 1 cut(s) 454
CaiI CAGNNNCTG 1 cut(s) 779
CciI TCATGA 1 cut(s) 1402
Cfr10I RCCGGY 1 cut(s) 214
Cfr13I GGNCC 2 cut(s) 182, 899
Csp6I GTAC 5 cut(s) 222, 474, 535, 923, 1550
CspCI CAANNNNNGTGG 2 cut(s) 265, 300
CviAII CATG 9 cut(s) 77, 219, 1015, 1225, 1403, 1436, 1440, 1532, 1579
CviQI GTAC 5 cut(s) 222, 474, 535, 923, 1550
DdeI CTNAG 5 cut(s) 49, 280, 579, 906, 1213
DpnI GATC 5 cut(s) 531, 599, 1164, 1248, 1407
DpnII GATC 5 cut(s) 529, 597, 1162, 1246, 1405
DraI TTTAAA 2 cut(s) 231, 241
EaeI YGGCCR 1 cut(s) 1463
Eam1104I CTCTTC 4 cut(s) 866, 984, 1264, 1379
EarI CTCTTC 4 cut(s) 866, 984, 1264, 1379
Eco130I CCWWGG 4 cut(s) 76, 246, 967, 1578
Eco24I GRGCYC 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 899
Eco57I CTGAAG 4 cut(s) 537, 926, 1275, 1686
Eco88I CYCGRG 2 cut(s) 378, 1727
EcoNI CCTNNNNNAGG 1 cut(s) 1727
EcoRII CCWGG 1 cut(s) 1636
EcoT14I CCWWGG 4 cut(s) 76, 246, 967, 1578
EcoT22I ATGCAT 2 cut(s) 1441, 1529
EcoT38I GRGCYC 1 cut(s) 301
ErhI CCWWGG 4 cut(s) 76, 246, 967, 1578
FaeI CATG 9 cut(s) 80, 222, 1018, 1228, 1406, 1439, 1443, 1535, 1582
FaqI GGGAC 2 cut(s) 287, 838
FatI CATG 9 cut(s) 76, 218, 1014, 1224, 1402, 1435, 1439, 1531, 1578
FauI CCCGC 1 cut(s) 1373
FblI GTMKAC 2 cut(s) 106, 831
Fnu4HI GCNGC 1 cut(s) 82
FokI GGATG 4 cut(s) 338, 643, 863, 1514
FriOI GRGCYC 1 cut(s) 301
Fsp4HI GCNGC 1 cut(s) 82
FspBI CTAG 4 cut(s) 225, 845, 968, 1230
GluI GCNGC 1 cut(s) 82
GsaI CCCAGC 1 cut(s) 351
GsuI CTGGAG 1 cut(s) 171
HaeIII GGCC 5 cut(s) 140, 183, 1078, 1465, 1573
HapII CCGG 2 cut(s) 215, 295
Hin1II CATG 9 cut(s) 80, 222, 1018, 1228, 1406, 1439, 1443, 1535, 1582
HincII GTYRAC 2 cut(s) 466, 1687
HindII GTYRAC 2 cut(s) 466, 1687
HinfI GANTC 7 cut(s) 130, 155, 374, 508, 706, 1136, 1496
HpaI GTTAAC 1 cut(s) 1687
HpaII CCGG 2 cut(s) 215, 295
HphI GGTGA 4 cut(s) 196, 500, 567, 607
Hpy166II GTNNAC 7 cut(s) 34, 107, 466, 762, 832, 1550, 1687
Hpy188I TCNGA 9 cut(s) 543, 556, 711, 1216, 1251, 1339, 1513, 1596, 1651
Hpy188III TCNNGA 6 cut(s) 100, 150, 882, 1133, 1140, 1403
Hpy8I GTNNAC 7 cut(s) 34, 107, 466, 762, 832, 1550, 1687
Hpy99I CGWCG 1 cut(s) 1343
HpyAV CCTTC 4 cut(s) 806, 1250, 1478, 1661
HpyCH4III ACNGT 1 cut(s) 829
HpyCH4IV ACGT 2 cut(s) 1341, 1697
HpyF10VI GCNNNNNNNGC 1 cut(s) 81
HpyF3I CTNAG 5 cut(s) 49, 280, 579, 906, 1213
HpySE526I ACGT 2 cut(s) 1341, 1697
Hsp92II CATG 9 cut(s) 80, 222, 1018, 1228, 1406, 1439, 1443, 1535, 1582
KspAI GTTAAC 1 cut(s) 1687
Kzo9I GATC 5 cut(s) 529, 597, 1162, 1246, 1405
LmnI GCTCC 1 cut(s) 969
LweI GCATC 5 cut(s) 614, 621, 1514, 1536, 1592
MaeI CTAG 4 cut(s) 225, 845, 968, 1230
MaeII ACGT 2 cut(s) 1341, 1697
MaeIII GTNAC 3 cut(s) 161, 769, 1261
MalI GATC 5 cut(s) 531, 599, 1164, 1248, 1407
MboI GATC 5 cut(s) 529, 597, 1162, 1246, 1405
MboII GAAGA 7 cut(s) 743, 883, 1001, 1109, 1281, 1396, 1692
MfeI CAATTG 1 cut(s) 1311
MflI RGATCY 2 cut(s) 529, 1162
MhlI GDGCHC 1 cut(s) 301
MluCI AATT 7 cut(s) 89, 356, 418, 557, 861, 1311, 1322
MlyI GAGTC 4 cut(s) 139, 149, 502, 1505
MmeI TCCRAC 4 cut(s) 333, 1258, 1347, 1362
Mph1103I ATGCAT 2 cut(s) 1441, 1529
MslI CAYNNNNRTG 3 cut(s) 177, 217, 629
MspI CCGG 2 cut(s) 215, 295
MspR9I CCNGG 2 cut(s) 296, 1638
MssI GTTTAAAC 1 cut(s) 241
MunI CAATTG 1 cut(s) 1311
Mva1269I GAATGC 3 cut(s) 6, 651, 1459
MvaI CCWGG 1 cut(s) 1638
MwoI GCNNNNNNNGC 1 cut(s) 81
NciI CCSGG 1 cut(s) 296
NcoI CCATGG 2 cut(s) 76, 1578
NdeII GATC 5 cut(s) 529, 597, 1162, 1246, 1405
NlaIII CATG 9 cut(s) 80, 222, 1018, 1228, 1406, 1439, 1443, 1535, 1582
NlaIV GGNNCC 5 cut(s) 252, 965, 1282, 1299, 1615
NmuCI GTSAC 2 cut(s) 161, 769
NsiI ATGCAT 2 cut(s) 1441, 1529
NspI RCATGY 3 cut(s) 222, 1018, 1439
PaeR7I CTCGAG 1 cut(s) 1727
PagI TCATGA 1 cut(s) 1402
PaqCI CACCTGC 1 cut(s) 556
PcsI WCGNNNNNNNCGW 2 cut(s) 726, 735
PctI GAATGC 3 cut(s) 6, 651, 1459
PfeI GAWTC 3 cut(s) 374, 706, 1136
PkrI GCNGC 1 cut(s) 83
PleI GAGTC 4 cut(s) 138, 149, 502, 1504
PmeI GTTTAAAC 1 cut(s) 241
PpsI GAGTC 4 cut(s) 138, 149, 502, 1504
PshAI GACNNNNGTC 1 cut(s) 168
Psp6I CCWGG 1 cut(s) 1636
PspFI CCCAGC 1 cut(s) 347
PspGI CCWGG 1 cut(s) 1636
PspN4I GGNNCC 5 cut(s) 252, 965, 1282, 1299, 1615
PspPI GGNCC 2 cut(s) 182, 899
PspXI VCTCGAGB 1 cut(s) 1727
PstI CTGCAG 1 cut(s) 413
PstNI CAGNNNCTG 1 cut(s) 779
PsuI RGATCY 2 cut(s) 529, 1162
RsaI GTAC 5 cut(s) 223, 475, 536, 924, 1551
RsaNI GTAC 5 cut(s) 222, 474, 535, 923, 1550
RseI CAYNNNNRTG 3 cut(s) 177, 217, 629
SatI GCNGC 1 cut(s) 82
Sau3AI GATC 5 cut(s) 529, 597, 1162, 1246, 1405
Sau96I GGNCC 2 cut(s) 182, 899
ScaI AGTACT 1 cut(s) 924
SchI GAGTC 4 cut(s) 139, 149, 502, 1505
ScrFI CCNGG 2 cut(s) 296, 1638
SduI GDGCHC 1 cut(s) 301
SfaNI GCATC 5 cut(s) 614, 621, 1514, 1536, 1592
SfcI CTRYAG 2 cut(s) 409, 1587
Sfr274I CTCGAG 1 cut(s) 1727
SinI GGWCC 1 cut(s) 899
SlaI CTCGAG 1 cut(s) 1727
SmiMI CAYNNNNRTG 3 cut(s) 177, 217, 629
SmlI CTYRAG 2 cut(s) 100, 1727
SmoI CTYRAG 2 cut(s) 100, 1727
SpeI ACTAGT 1 cut(s) 224
Sse9I AATT 7 cut(s) 89, 356, 418, 557, 861, 1311, 1322
SsiI CCGC 5 cut(s) 81, 593, 617, 1147, 1380
SspI AATATT 1 cut(s) 750
SspMI CTAG 4 cut(s) 225, 845, 968, 1230
StyD4I CCNGG 2 cut(s) 294, 1636
StyI CCWWGG 4 cut(s) 76, 246, 967, 1578
TaaI ACNGT 1 cut(s) 829
TaiI ACGT 2 cut(s) 1344, 1700
TaqI TCGA 5 cut(s) 143, 402, 738, 1057, 1728
TasI AATT 7 cut(s) 89, 356, 418, 557, 861, 1311, 1322
TatI WGTACW 5 cut(s) 221, 473, 534, 922, 1549
TauI GCSGC 1 cut(s) 84
TfiI GAWTC 3 cut(s) 374, 706, 1136
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 2 cut(s) 161, 769
Tsp45I GTSAC 2 cut(s) 161, 769
TspGWI ACGGA 1 cut(s) 735
TspRI CASTG 1 cut(s) 784
VpaK11BI GGWCC 1 cut(s) 899
XagI CCTNNNNNAGG 1 cut(s) 1727
XceI RCATGY 3 cut(s) 222, 1018, 1439
XcmI CCANNNNNNNNNTGG 1 cut(s) 1027
XhoI CTCGAG 1 cut(s) 1727
XmaJI CCTAGG 1 cut(s) 967
XmiI GTMKAC 2 cut(s) 106, 831
XspI CTAG 4 cut(s) 225, 845, 968, 1230
ZrmI AGTACT 1 cut(s) 924
Zsp2I ATGCAT 2 cut(s) 1441, 1529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.