Rmu_sc0002014.1_g000040

Uncharacterized protein K02A2.6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002014.1
Physical Location & Seq
Forward (+)
153835 .. 155185
1351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002014.1_g000040.1.cds

Sequence Viewer

Length: 849 bp
atgggaaccgcgggacccataccatcatttagaagtcttccaatccttactccatggaacctgatacatcgacgccatggcctgccacgcattaacaccaatccctctgcaacatacaatgacctcctcaatgctgctaccgccttcgctcaggcagagtatggcacatttggccgcgataccaacgccaatgctcatccagccactgtacctcaagcaaatcctgataccataaacaaagacaccgatgtagacaaacctgcccagccaaacaacaaggcccaacgggaacgacagggctatagcgataggagagacaggcaatacggcaagagccccgagaagccaaaatacaactcctcaagcagtcgacattgcgatgcaccatacggcggcacccgacacagggatgaccagcgatttgcgagcgaccaactctcacactatcgcactcccaccactggcgctaacgccatagaagtatacggccagatcttaaagatacatggcggcgccctgcgaacacctgagacccaccatgcccagaagctccaatgccctcagggccaagaaatattgggactcagccatggttgccacaccccccaggtcgaatggaactcgatagcctttaaccacagtgaggacaccatccagaagcaccacaatgacccactcttaataaccatggtcatcgaccactgtcgctaccacagggtcttggtcgatagcggcgcagtggtcagagtactgtttggcagcagctgctatgagggcctcaaccgagataggaagaaactcacccccgatcatgaaccccaaatcagcttcacaggagaaattacatag

Protein Analysis

282

Amino Acids

31.52

Weight (kDa)

8.56

Isoelectric Point (pI)

37.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000863)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29436 FvH4_4g08647
prunus_persica Prupe.1G244600_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0041081 RchiOBHm_Chr7g0227381
rosa_multiflora Rmu_co8094356.1_g000001 Rmu_co8097010.1_g000001 Rmu_co8307317.1_g000001 Rmu_co8331341.1_g000001 Rmu_co8353833.1_g000001 Rmu_co8426601.1_g000001 Rmu_co8464885.1_g000001 Rmu_sc0000161.1_g000045 Rmu_sc0000367.1_g000181 Rmu_sc0000438.1_g000020 Rmu_sc0000637.1_g000008 Rmu_sc0000706.1_g000036 Rmu_sc0000745.1_g000002 Rmu_sc0000964.1_g000007 Rmu_sc0001016.1_g000045 Rmu_sc0001190.1_g000046 Rmu_sc0002014.1_g000040 Rmu_sc0002229.1_g000012 Rmu_sc0002279.1_g000021 Rmu_sc0002279.1_g000049 Rmu_sc0002308.1_g000074 Rmu_sc0002482.1_g000017 Rmu_sc0002809.1_g000002 Rmu_sc0003147.1_g000020 Rmu_sc0003226.1_g000065 Rmu_sc0003246.1_g000004 Rmu_sc0003260.1_g000011 Rmu_sc0003441.1_g000081 Rmu_sc0003895.1_g000019 Rmu_sc0004228.1_g000001 Rmu_sc0004646.1_g000038 Rmu_sc0004688.1_g000018 Rmu_sc0005389.1_g000016 Rmu_sc0005537.1_g000011 Rmu_sc0005954.1_g000010 Rmu_sc0006021.1_g000020 Rmu_sc0006695.1_g000056 Rmu_sc0006822.1_g000010 Rmu_sc0007877.1_g000013 Rmu_sc0008049.1_g000067 Rmu_sc0008691.1_g000004 Rmu_sc0009206.1_g000002 Rmu_sc0011734.1_g000008 Rmu_sc0012136.1_g000012 Rmu_sc0012746.1_g000018 Rmu_sc0013612.1_g000011 Rmu_sc0016149.1_g000005 Rmu_sc0018867.1_g000011 Rmu_sc0020611.1_g000002 Rmu_sc0021291.1_g000004 Rmu_sc0021291.1_g000005 Rmu_sc0022400.1_g000007 Rmu_sc0025427.1_g000001 Rmu_sc0027953.1_g000002 Rmu_sc0033748.1_g000002 Rmu_ssc0000072.1_g000004 Rmu_ssc0000197.1_g000082
rosa_roxburghii Rroxscaffold_4G00282700 Rroxscaffold_5G00374470 Rroxscaffold_7G00183200
rosa_rugosa Rorug02G0187100 Rorug05G0255100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 268
AccB1I GGYRCC 2 cut(s) 395, 512
AccI GTMKAC 3 cut(s) 252, 370, 483
AccII CGCG 2 cut(s) 11, 177
AciI CCGC 7 cut(s) 9, 11, 141, 175, 393, 510, 732
AcoI YGGCCR 2 cut(s) 172, 487
AcyI GRCGYC 2 cut(s) 73, 513
AfaI GTAC 2 cut(s) 210, 750
AfiI CCNNNNNNNGG 5 cut(s) 392, 405, 406, 461, 643
AjnI CCWGG 1 cut(s) 606
AluBI AGCT 3 cut(s) 550, 765, 828
AluI AGCT 3 cut(s) 550, 765, 828
Alw26I GTCTC 2 cut(s) 309, 524
AlwNI CAGNNNCTG 2 cut(s) 206, 765
Ama87I CYCGRG 1 cut(s) 338
AoxI GGCC 6 cut(s) 79, 172, 279, 487, 565, 775
ApeKI GCWGC 4 cut(s) 134, 759, 762, 765
ArsI GACNNNNNNTTYG 2 cut(s) 404, 436
AspLEI GCGC 3 cut(s) 467, 515, 737
AspS9I GGNCC 4 cut(s) 14, 280, 565, 775
AsuHPI GGTGA 1 cut(s) 793
AvaI CYCGRG 1 cut(s) 338
AvaII GGWCC 1 cut(s) 14
AxyI CCTNAGG 1 cut(s) 561
BanI GGYRCC 2 cut(s) 395, 512
BanII GRGCYC 1 cut(s) 338
BarI GAAGNNNNNNTAC 2 cut(s) 335, 367
BbsI GAAGAC 1 cut(s) 29
BbvI GCAGC 4 cut(s) 121, 752, 771, 774
BccI CCATC 2 cut(s) 31, 659
BceAI ACGGC 3 cut(s) 343, 406, 502
BciT130I CCWGG 1 cut(s) 608
BcoDI GTCTC 2 cut(s) 309, 524
BfmI CTRYAG 1 cut(s) 301
BfoI RGCGCY 2 cut(s) 468, 516
BfuAI ACCTGC 1 cut(s) 268
BglI GCCNNNNNGGC 1 cut(s) 564
BglII AGATCT 1 cut(s) 492
BisI GCNGC 8 cut(s) 135, 175, 394, 511, 733, 760, 763, 766
BlsI GCNGC 8 cut(s) 136, 176, 395, 512, 734, 761, 764, 767
BmcAI AGTACT 1 cut(s) 750
Bme1390I CCNGG 1 cut(s) 608
Bme18I GGWCC 1 cut(s) 14
BmeT110I CYCGRG 1 cut(s) 338
BmgT120I GGNCC 4 cut(s) 14, 280, 565, 775
BmiI GGNNCC 6 cut(s) 7, 15, 16, 59, 397, 514
BmrFI CCNGG 1 cut(s) 608
BmsI GCATC 1 cut(s) 370
BoxI GACNNNNGTC 1 cut(s) 702
BpiI GAAGAC 1 cut(s) 29
Bpu10I CCTNAGC 1 cut(s) 150
BpuEI CTTGAG 2 cut(s) 198, 346
BsaHI GRCGYC 2 cut(s) 73, 513
BsaI GGTCTC 1 cut(s) 524
BsaJI CCNNGG 6 cut(s) 9, 53, 76, 589, 606, 687
Bsc4I CCNNNNNNNGG 5 cut(s) 392, 405, 406, 461, 643
Bse1I ACTGG 1 cut(s) 466
Bse21I CCTNAGG 1 cut(s) 561
Bse3DI GCAATG 1 cut(s) 373
BseBI CCWGG 1 cut(s) 608
BseDI CCNNGG 6 cut(s) 9, 53, 76, 589, 606, 687
BseGI GGATG 3 cut(s) 196, 415, 651
BseLI CCNNNNNNNGG 5 cut(s) 392, 405, 406, 461, 643
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 4 cut(s) 164, 519, 575, 598
BseNI ACTGG 1 cut(s) 466
BseRI GAGGAG 2 cut(s) 116, 349
BseXI GCAGC 4 cut(s) 121, 752, 771, 774
BseYI CCCAGC 1 cut(s) 264
Bsh1236I CGCG 2 cut(s) 11, 177
BshFI GGCC 6 cut(s) 81, 174, 281, 489, 567, 777
BshNI GGYRCC 2 cut(s) 395, 512
BsiHKCI CYCGRG 1 cut(s) 338
BslFI GGGAC 2 cut(s) 27, 594
BslI CCNNNNNNNGG 5 cut(s) 392, 405, 406, 461, 643
BsmAI GTCTC 2 cut(s) 309, 524
BsmFI GGGAC 2 cut(s) 27, 594
BsnI GGCC 6 cut(s) 81, 174, 281, 489, 567, 777
Bso31I GGTCTC 1 cut(s) 524
BsoBI CYCGRG 1 cut(s) 338
Bsp1286I GDGCHC 1 cut(s) 338
Bsp143I GATC 2 cut(s) 492, 808
Bsp19I CCATGG 4 cut(s) 53, 76, 589, 687
BspACI CCGC 7 cut(s) 9, 11, 141, 175, 393, 510, 732
BspANI GGCC 6 cut(s) 81, 174, 281, 489, 567, 777
BspCNI CTCAG 4 cut(s) 163, 520, 574, 597
BspFNI CGCG 2 cut(s) 11, 177
BspHI TCATGA 1 cut(s) 811
BspLI GGNNCC 6 cut(s) 7, 15, 16, 59, 397, 514
BspMI ACCTGC 1 cut(s) 268
BspT107I GGYRCC 2 cut(s) 395, 512
BspTNI GGTCTC 1 cut(s) 524
BsrDI GCAATG 1 cut(s) 373
BsrI ACTGG 1 cut(s) 466
BssECI CCNNGG 6 cut(s) 9, 53, 76, 589, 606, 687
BssMI GATC 2 cut(s) 492, 808
BssNAI GTATAC 1 cut(s) 484
BssNI GRCGYC 2 cut(s) 73, 513
BssT1I CCWWGG 4 cut(s) 53, 76, 589, 687
Bst1107I GTATAC 1 cut(s) 484
Bst2UI CCWGG 1 cut(s) 608
Bst4CI ACNGT 4 cut(s) 208, 641, 704, 753
BstACI GRCGYC 2 cut(s) 73, 513
BstAPI GCANNNNNTGC 1 cut(s) 765
BstC8I GCNNGC 2 cut(s) 83, 427
BstDEI CTNAG 4 cut(s) 150, 528, 561, 584
BstDSI CCRYGG 5 cut(s) 9, 53, 76, 589, 687
BstF5I GGATG 3 cut(s) 196, 415, 651
BstFNI CGCG 2 cut(s) 11, 177
BstH2I RGCGCY 2 cut(s) 468, 516
BstHHI GCGC 3 cut(s) 467, 515, 737
BstKTI GATC 2 cut(s) 495, 811
BstMAI GTCTC 2 cut(s) 309, 524
BstMBI GATC 2 cut(s) 492, 808
BstMWI GCNNNNNNNGC 8 cut(s) 87, 140, 171, 200, 564, 594, 765, 774
BstNI CCWGG 1 cut(s) 608
BstPAI GACNNNNGTC 1 cut(s) 702
BstSCI CCNGG 1 cut(s) 606
BstSFI CTRYAG 1 cut(s) 301
BstUI CGCG 2 cut(s) 11, 177
BstV1I GCAGC 4 cut(s) 121, 752, 771, 774
BstV2I GAAGAC 1 cut(s) 29
BstX2I RGATCY 1 cut(s) 492
BstYI RGATCY 1 cut(s) 492
BstZ17I GTATAC 1 cut(s) 484
Bsu36I CCTNAGG 1 cut(s) 561
BsuRI GGCC 6 cut(s) 81, 174, 281, 489, 567, 777
BtgI CCRYGG 5 cut(s) 9, 53, 76, 589, 687
BtgZI GCGATG 1 cut(s) 393
BtsCI GGATG 3 cut(s) 196, 415, 651
BtsI GCAGTG 1 cut(s) 744
BtsIMutI CAGTG 5 cut(s) 204, 459, 646, 700, 744
BveI ACCTGC 1 cut(s) 268
Cac8I GCNNGC 2 cut(s) 83, 427
CaiI CAGNNNCTG 2 cut(s) 206, 765
CciI TCATGA 1 cut(s) 811
CfoI GCGC 3 cut(s) 467, 515, 737
Cfr13I GGNCC 4 cut(s) 14, 280, 565, 775
Cfr42I CCGCGG 1 cut(s) 12
CseI GACGC 1 cut(s) 81
Csp6I GTAC 2 cut(s) 209, 749
CviAII CATG 7 cut(s) 54, 77, 506, 539, 590, 688, 812
CviQI GTAC 2 cut(s) 209, 749
DdeI CTNAG 4 cut(s) 150, 528, 561, 584
DinI GGCGCC 1 cut(s) 514
DpnI GATC 2 cut(s) 494, 810
DpnII GATC 2 cut(s) 492, 808
EaeI YGGCCR 2 cut(s) 172, 487
Eco130I CCWWGG 4 cut(s) 53, 76, 589, 687
Eco24I GRGCYC 1 cut(s) 338
Eco31I GGTCTC 1 cut(s) 524
Eco47I GGWCC 1 cut(s) 14
Eco81I CCTNAGG 1 cut(s) 561
Eco88I CYCGRG 1 cut(s) 338
EcoO109I RGGNCCY 2 cut(s) 14, 775
EcoRII CCWGG 1 cut(s) 606
EcoT14I CCWWGG 4 cut(s) 53, 76, 589, 687
EcoT38I GRGCYC 1 cut(s) 338
EgeI GGCGCC 1 cut(s) 514
EheI GGCGCC 1 cut(s) 514
ErhI CCWWGG 4 cut(s) 53, 76, 589, 687
FaeI CATG 7 cut(s) 57, 80, 509, 542, 593, 691, 815
FaqI GGGAC 2 cut(s) 27, 594
FatI CATG 7 cut(s) 53, 76, 505, 538, 589, 687, 811
FauI CCCGC 1 cut(s) 4
FblI GTMKAC 3 cut(s) 252, 370, 483
Fnu4HI GCNGC 8 cut(s) 135, 175, 394, 511, 733, 760, 763, 766
FokI GGATG 3 cut(s) 183, 422, 638
FriOI GRGCYC 1 cut(s) 338
Fsp4HI GCNGC 8 cut(s) 135, 175, 394, 511, 733, 760, 763, 766
GlaI GCGC 3 cut(s) 466, 514, 736
GluI GCNGC 8 cut(s) 135, 175, 394, 511, 733, 760, 763, 766
GsaI CCCAGC 1 cut(s) 268
HaeII RGCGCY 2 cut(s) 468, 516
HaeIII GGCC 6 cut(s) 81, 174, 281, 489, 567, 777
HgaI GACGC 1 cut(s) 81
HhaI GCGC 3 cut(s) 467, 515, 737
Hin1I GRCGYC 2 cut(s) 73, 513
Hin1II CATG 7 cut(s) 57, 80, 509, 542, 593, 691, 815
Hin6I GCGC 3 cut(s) 465, 513, 735
HinP1I GCGC 3 cut(s) 465, 513, 735
HincII GTYRAC 1 cut(s) 371
HindII GTYRAC 1 cut(s) 371
HinfI GANTC 1 cut(s) 582
HphI GGTGA 1 cut(s) 793
Hpy166II GTNNAC 3 cut(s) 253, 371, 484
Hpy188I TCNGA 1 cut(s) 746
Hpy188III TCNNGA 3 cut(s) 224, 655, 812
Hpy8I GTNNAC 3 cut(s) 253, 371, 484
Hpy99I CGWCG 1 cut(s) 75
HpyAV CCTTC 1 cut(s) 154
HpyCH4III ACNGT 4 cut(s) 208, 641, 704, 753
HpyCH4V TGCA 2 cut(s) 110, 383
HpyF10VI GCNNNNNNNGC 8 cut(s) 87, 140, 171, 200, 564, 594, 765, 774
HpyF3I CTNAG 4 cut(s) 150, 528, 561, 584
Hsp92I GRCGYC 2 cut(s) 73, 513
Hsp92II CATG 7 cut(s) 57, 80, 509, 542, 593, 691, 815
HspAI GCGC 3 cut(s) 465, 513, 735
KasI GGCGCC 1 cut(s) 512
KflI GGGWCCC 1 cut(s) 14
KspI CCGCGG 1 cut(s) 12
Kzo9I GATC 2 cut(s) 492, 808
LmnI GCTCC 1 cut(s) 555
Lsp1109I GCAGC 4 cut(s) 121, 752, 771, 774
LweI GCATC 1 cut(s) 370
MalI GATC 2 cut(s) 494, 810
MboI GATC 2 cut(s) 492, 808
MboII GAAGA 2 cut(s) 29, 805
MflI RGATCY 1 cut(s) 492
MhlI GDGCHC 1 cut(s) 338
MluCI AATT 1 cut(s) 840
Mly113I GGCGCC 1 cut(s) 513
MlyI GAGTC 1 cut(s) 576
MnlI CCTC 9 cut(s) 115, 134, 137, 222, 370, 570, 637, 766, 788
MseI TTAA 4 cut(s) 93, 497, 633, 680
MslI CAYNNNNRTG 3 cut(s) 378, 408, 666
MspA1I CMGCKG 2 cut(s) 11, 765
MspR9I CCNGG 1 cut(s) 608
MvaI CCWGG 1 cut(s) 608
MvnI CGCG 2 cut(s) 11, 177
MwoI GCNNNNNNNGC 8 cut(s) 87, 140, 171, 200, 564, 594, 765, 774
NarI GGCGCC 1 cut(s) 513
NcoI CCATGG 4 cut(s) 53, 76, 589, 687
NdeII GATC 2 cut(s) 492, 808
NlaIII CATG 7 cut(s) 57, 80, 509, 542, 593, 691, 815
NlaIV GGNNCC 6 cut(s) 7, 15, 16, 59, 397, 514
PagI TCATGA 1 cut(s) 811
PkrI GCNGC 8 cut(s) 136, 176, 395, 512, 734, 761, 764, 767
PleI GAGTC 1 cut(s) 576
PluTI GGCGCC 1 cut(s) 516
PpsI GAGTC 1 cut(s) 576
PpuMI RGGWCCY 1 cut(s) 14
PshAI GACNNNNGTC 1 cut(s) 702
Psp5II RGGWCCY 1 cut(s) 14
Psp6I CCWGG 1 cut(s) 606
PspFI CCCAGC 1 cut(s) 264
PspGI CCWGG 1 cut(s) 606
PspN4I GGNNCC 6 cut(s) 7, 15, 16, 59, 397, 514
PspPI GGNCC 4 cut(s) 14, 280, 565, 775
PspPPI RGGWCCY 1 cut(s) 14
PstNI CAGNNNCTG 2 cut(s) 206, 765
PsuI RGATCY 1 cut(s) 492
PvuII CAGCTG 1 cut(s) 765
RsaI GTAC 2 cut(s) 210, 750
RsaNI GTAC 2 cut(s) 209, 749
RseI CAYNNNNRTG 3 cut(s) 378, 408, 666
SacII CCGCGG 1 cut(s) 12
SalI GTCGAC 1 cut(s) 369
SaqAI TTAA 4 cut(s) 93, 497, 633, 680
SatI GCNGC 8 cut(s) 135, 175, 394, 511, 733, 760, 763, 766
Sau3AI GATC 2 cut(s) 492, 808
Sau96I GGNCC 4 cut(s) 14, 280, 565, 775
ScaI AGTACT 1 cut(s) 750
SchI GAGTC 1 cut(s) 576
ScrFI CCNGG 1 cut(s) 608
SduI GDGCHC 1 cut(s) 338
SetI ASST 9 cut(s) 63, 126, 214, 262, 529, 552, 612, 767, 830
SfaNI GCATC 1 cut(s) 370
SfcI CTRYAG 1 cut(s) 301
SfoI GGCGCC 1 cut(s) 514
Sfr303I CCGCGG 1 cut(s) 12
SgrBI CCGCGG 1 cut(s) 12
SinI GGWCC 1 cut(s) 14
SmiMI CAYNNNNRTG 3 cut(s) 378, 408, 666
SmlI CTYRAG 2 cut(s) 213, 361
SmoI CTYRAG 2 cut(s) 213, 361
Sse9I AATT 1 cut(s) 840
SsiI CCGC 7 cut(s) 9, 11, 141, 175, 393, 510, 732
SspDI GGCGCC 1 cut(s) 512
SspI AATATT 1 cut(s) 576
StyD4I CCNGG 1 cut(s) 606
StyI CCWWGG 4 cut(s) 53, 76, 589, 687
TaaI ACNGT 4 cut(s) 208, 641, 704, 753
TaqI TCGA 6 cut(s) 70, 370, 612, 623, 696, 726
TasI AATT 1 cut(s) 840
TatI WGTACW 1 cut(s) 748
TauI GCSGC 4 cut(s) 177, 396, 513, 735
Tru1I TTAA 4 cut(s) 93, 497, 633, 680
Tru9I TTAA 4 cut(s) 93, 497, 633, 680
TscAI CASTG 5 cut(s) 211, 466, 646, 707, 744
TseI GCWGC 4 cut(s) 134, 759, 762, 765
TspDTI ATGAA 1 cut(s) 828
TspRI CASTG 5 cut(s) 211, 466, 646, 707, 744
VpaK11BI GGWCC 1 cut(s) 14
XmiI GTMKAC 3 cut(s) 252, 370, 483
ZrmI AGTACT 1 cut(s) 750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.