Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000407

Physical Location & Seq

Genomic Coordinates Reverse (-)

3692998 .. 3695877

Gene Structure 2880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16276

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGTGGTTACTAAAGGGATGGCAAGAGTTTGCTAACTTTTACTCACTAGACCAAGGCTGCTTTCCAGTGTTCAGCTATGAAGGAAAACAGTCCCATTTCCAAGTACGCATTTTTCATTGGAAATGCATGGAAATGGATTACCCTATTCGTAGGCGAGGTACATTCTCACGTGCAATGGCTTCTTCCGGCAAGAGAGATGGAAAAGGACCTGCCTTTCCGGAGGACTATCCAAGCTTCTTCTTAAACATTGTTACTGATGACGATCTCCTAGATGGGAAGGAACTTCCAGAGCCAGCTGTGAGGAAGTACAGAAATTGCATGGCAGATCATATATTCCTCGAGGTTCCAAACTGCGAAAAACCATGGAAATTGAATTTGAGAAGATCAGCTCGTGGTGGCCGAATGTGGTTAAACAAGGGATGGCAAGAGTTTGCCAACTTTTACTCGCTAGATGAAGGCTACTTTGCAGTGTTCAGCTATGAAGGCGAACATTCTCATTTCCAAGTACGTGTTTTTCAGTGGAATGATATGGAATTAGAATACCCTATTCATGGAGGAGGAGTTGATGGCAGACCAAAAAGGAAAAAAACAGGAGCTAATCAAGACATGCCTCCTGCTCATTTAGAAACTAGAGCCGCTTCAATTTCCTCCGGATCCTCAGCTGATGAACACCAAAACGATCTTACTGCAACTGCCAGTTTCAAATCTAACAAGCCATTTTTTATGCTTAACATCTGTGCTTCATACATACAACTCTGTTTTGCGCACATAAATCGATCTTTTGCCAAGGAACATCTCTGTAGACCAGGCACTTCCTGCGATGTGACCCTGCAGATTTCAGGTGAGAGAGTTTGGACTGCTGTGTGCACTGCCACCGAACATAGAGATCAGAAAATATATACTAGATTTTCAGGTGCTGGATGGAAAGCATTTCAGCAGGACAATCATCTGGTAAAAGGTAATATCTGTGTGTTCGAGTTGATAGAGGAGCGTACATTCAAAGTTTCCATATTCCGAACTAAAGTGAAGATTAATAGGCAAGCTGAGGAAAAGGATATGGAAATAGATTACCCTATTCATGGAGGAGGAATTGATGTAACACTAAAAGGGAAAAAGCCAGGAGCTAATCAAGAGGTGCCTCCTGCCCACTTAGAAGCTAGAGCCAATTCAGTTTCTTCTGGATCCTCAGCTGATGAAGACCAAAATAATCTTCTCACAACTACTAGTTTCAAATCTGACAAGCCAATTTTTATGCTCAATATGACAGCTACATACATGCGCCTCTCTCTTGCGCACATAAGTGCATCATTTGCTGCTGAACATCTATGCAAACCAGGCATTTCTTGCAATGTGATCCTACAGAATTCAGAGGAGAGAGTTTGGACTGCTCAGTGTTTTGTCAGTGAACACAGCCATCACCGAGTGCAAGCAAGTCTCTCAGGGCCTGGTTGGAAAGCATTTAAGCAGGACAATCATCTGGTATTAGGTGATGTCTGTGTTTTTGAGTTGATAGATGAACGTAAACTAAAAGTTTCCATATTCCAAGGTAAAGTGAAGATTATTAGGCAAAATGAGGAAAATGAAGCCAGGCACATTTCTCAGTTTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

536

Amino Acids

61.14

Weight (kDa)

7.6

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	93 - 172	1.9e-09	B3 DNA binding domain
B3	PF02362	245 - 340	1.9e-11	B3 DNA binding domain
B3	PF02362	422 - 515	2.6e-11	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000407)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g29511 FvH4_5g16850 FvH4_5g16850 FvH4_5g16850 FvH4_5g16850 FvH4_6g40050 FvH4_7g32411 FvH4_7g32411 FvH4_7g32412 FvH4_7g32412 FvH4_7g32412 FvH4_7g32412 FvH4_7g32412 FvH4_7g32750
rosa_chinensis	RchiOBHm_Chr1g0382001 RchiOBHm_Chr1g0382011 RchiOBHm_Chr7g0179221 RchiOBHm_Chr7g0182451 RchiOBHm_Chr7g0182461 RchiOBHm_Chr7g0182471 RchiOBHm_Chr7g0182511 RchiOBHm_Chr7g0211791
rosa_laevigata	RLG00000002969 RLG00000005122 RLG00000005123 RLG00000026188 RLG00000026193 RLG00000026194
rosa_multiflora	Rmu_co8485709.1_g000001 Rmu_sc0000110.1_g000003 Rmu_sc0006047.1_g000007 Rmu_sc0006047.1_g000011 Rmu_sc0006047.1_g000015 Rmu_sc0006047.1_g000016 Rmu_sc0007448.1_g000001 Rmu_sc0009005.1_g000015 Rmu_sc0009991.1_g000003 Rmu_sc0016160.1_g000004 Rmu_sc0030974.1_g000004 Rmu_sc0030974.1_g000005 Rmu_sc0034215.1_g000004
rosa_roxburghii	Rroxscaffold_3G00247430 Rroxscaffold_3G00271240 Rroxscaffold_3G00271250 Rroxscaffold_3G00274210 Rroxscaffold_4G00278270
rosa_rugosa	Rorug01G0432800 Rorug01G0432900 Rorug01G0432900 Rorug01G0432900 Rorug01G0433000 Rorug06G0422300 Rorug06G0422400 Rorug06G0447800 Rorug06G0447900 Rorug06G0448000 Rorug07G0128700
rosa_samantha	Rh1AG456100 Rh1AG456200 Rh1AG456500 Rh1AG457000 Rh1AG457600 Rh1AG457700 Rh1BG413200 Rh1CG428100 Rh1CG428200 Rh1DG445500 Rh2DG673100 Rh7AG021600 Rh7AG051100 Rh7AG051200 Rh7AG051300 Rh7AG051600 Rh7AG261400 Rh7BG021600 Rh7BG050700 Rh7BG050800 Rh7BG255000 Rh7CG022800 Rh7CG052200 Rh7CG052300 Rh7CG052400 Rh7CG052500 Rh7CG278000 Rh7DG022200 Rh7DG050000 Rh7DG050100 Rh7DG050200 Rh7DG050600 Rh7DG050700 Rh7DG268000
rosa_wichuraiana	Rw1G041300 Rw1G041310 Rw1G041540 Rw1G041550 Rw7G001780 Rw7G004150 Rw7G004160 Rw7G004170 Rw7G022290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	338
Acc16I	TGCGCA	2 cut(s)	765, 1293
Acc36I	ACCTGC	1 cut(s)	217
AccB1I	GGYRCC	1 cut(s)	1135
AccI	GTMKAC	1 cut(s)	802
AccIII	TCCGGA	2 cut(s)	217, 650
AciI	CCGC	1 cut(s)	636
AclWI	GGATC	5 cut(s)	648, 661, 1176, 1189, 1348
AcoI	YGGCCR	1 cut(s)	397
AcsI	RAATTY	2 cut(s)	373, 1363
AcvI	CACGTG	1 cut(s)	170
AdeI	CACNNNGTG	1 cut(s)	1423
AfaI	GTAC	5 cut(s)	105, 160, 308, 507, 994
AfiI	CCNNNNNNNGG	2 cut(s)	551, 1079
AflIII	ACRYGT	1 cut(s)	508
AgsI	TTSAA	5 cut(s)	373, 642, 703, 1000, 1231
AhlI	ACTAGT	1 cut(s)	1223
AjnI	CCWGG	5 cut(s)	805, 1117, 1333, 1444, 1586
AjuI	GAANNNNNNNTTGG	4 cut(s)	45, 77, 1194, 1226
AleI	CACNNNNGTG	1 cut(s)	1299
Alw21I	GWGCWC	1 cut(s)	869
Alw26I	GTCTC	1 cut(s)	1439
Alw44I	GTGCAC	1 cut(s)	865
AlwI	GGATC	5 cut(s)	648, 661, 1176, 1189, 1348
AlwNI	CAGNNNCTG	2 cut(s)	917, 1445
Ama87I	CYCGRG	1 cut(s)	338
Aor13HI	TCCGGA	2 cut(s)	217, 650
AoxI	GGCC	2 cut(s)	397, 1442
ApaLI	GTGCAC	1 cut(s)	865
ApeKI	GCWGC	2 cut(s)	57, 1313
ApoI	RAATTY	2 cut(s)	373, 1363
AseI	ATTAAT	1 cut(s)	1032
AspLEI	GCGC	3 cut(s)	766, 1281, 1294
AspS9I	GGNCC	2 cut(s)	206, 1442
AsuHPI	GGTGA	3 cut(s)	854, 1409, 1499
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	1 cut(s)	206
BaeGI	GKGCMC	1 cut(s)	869
BamHI	GGATCC	2 cut(s)	653, 1181
BanI	GGYRCC	1 cut(s)	1135
BauI	CACGAG	1 cut(s)	390
BbrPI	CACGTG	1 cut(s)	170
BbsI	GAAGAC	1 cut(s)	1203
Bbv12I	GWGCWC	1 cut(s)	869
BbvCI	CCTCAGC	3 cut(s)	658, 1044, 1186
BbvI	GCAGC	2 cut(s)	44, 1300
BccI	CCATC	7 cut(s)	12, 191, 266, 414, 560, 915, 1422
BcgI	CGANNNNNNTGC	4 cut(s)	668, 702, 755, 789
BciT130I	CCWGG	5 cut(s)	807, 1119, 1335, 1446, 1588
BcoDI	GTCTC	1 cut(s)	1439
BcuI	ACTAGT	1 cut(s)	1223
BfaI	CTAG	7 cut(s)	47, 269, 449, 630, 903, 1158, 1224
BfmI	CTRYAG	3 cut(s)	799, 830, 1358
BfuAI	ACCTGC	1 cut(s)	217
BisI	GCNGC	3 cut(s)	58, 636, 1314
BlsI	GCNGC	3 cut(s)	59, 637, 1315
Bme1390I	CCNGG	5 cut(s)	807, 1119, 1335, 1446, 1588
Bme18I	GGWCC	1 cut(s)	206
BmeT110I	CYCGRG	1 cut(s)	338
BmgT120I	GGNCC	2 cut(s)	206, 1442
BmiI	GGNNCC	4 cut(s)	345, 655, 1137, 1183
BmrFI	CCNGG	5 cut(s)	807, 1119, 1335, 1446, 1588
BmsI	GCATC	1 cut(s)	1313
BpiI	GAAGAC	1 cut(s)	1203
Bpu10I	CCTNAGC	3 cut(s)	658, 1044, 1186
Bsa29I	ATCGAT	1 cut(s)	775
BsaAI	YACGTR	2 cut(s)	170, 509
BsaBI	GATNNNNATC	1 cut(s)	261
BsaJI	CCNNGG	4 cut(s)	52, 362, 786, 1543
BsaWI	WCCGGW	2 cut(s)	217, 650
BsaXI	ACNNNNNCTCC	2 cut(s)	546, 576
Bsc4I	CCNNNNNNNGG	2 cut(s)	551, 1079
Bse1I	ACTGG	2 cut(s)	65, 696
Bse3DI	GCAATG	2 cut(s)	180, 1354
Bse8I	GATNNNNATC	1 cut(s)	261
BseAI	TCCGGA	2 cut(s)	217, 650
BseBI	CCWGG	5 cut(s)	807, 1119, 1335, 1446, 1588
BseCI	ATCGAT	1 cut(s)	775
BseDI	CCNNGG	4 cut(s)	52, 362, 786, 1543
BseGI	GGATG	3 cut(s)	23, 425, 926
BseJI	GATNNNNATC	1 cut(s)	261
BseLI	CCNNNNNNNGG	2 cut(s)	551, 1079
BseMI	GCAATG	2 cut(s)	180, 1354
BseMII	CTCAG	5 cut(s)	672, 1035, 1200, 1403, 1452
BseNI	ACTGG	2 cut(s)	65, 696
BseRI	GAGGAG	5 cut(s)	570, 573, 1001, 1098, 1385
BseSI	GKGCMC	1 cut(s)	869
BseXI	GCAGC	2 cut(s)	44, 1300
BshFI	GGCC	2 cut(s)	399, 1444
BshNI	GGYRCC	1 cut(s)	1135
BshVI	ATCGAT	1 cut(s)	775
BsiHKAI	GWGCWC	1 cut(s)	869
BsiHKCI	CYCGRG	1 cut(s)	338
BsiSI	CCGG	3 cut(s)	186, 218, 651
BslFI	GGGAC	1 cut(s)	76
BslI	CCNNNNNNNGG	2 cut(s)	551, 1079
BsmAI	GTCTC	1 cut(s)	1439
BsmFI	GGGAC	1 cut(s)	76
BsnI	GGCC	2 cut(s)	399, 1444
BsoBI	CYCGRG	1 cut(s)	338
Bsp1286I	GDGCHC	1 cut(s)	869
Bsp13I	TCCGGA	2 cut(s)	217, 650
Bsp143I	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
Bsp19I	CCATGG	1 cut(s)	362
BspACI	CCGC	1 cut(s)	636
BspANI	GGCC	2 cut(s)	399, 1444
BspCNI	CTCAG	5 cut(s)	671, 1036, 1199, 1402, 1451
BspDI	ATCGAT	1 cut(s)	775
BspEI	TCCGGA	2 cut(s)	217, 650
BspLI	GGNNCC	4 cut(s)	345, 655, 1137, 1183
BspMAI	CTGCAG	1 cut(s)	834
BspMI	ACCTGC	1 cut(s)	217
BspPI	GGATC	5 cut(s)	648, 661, 1176, 1189, 1348
BspT107I	GGYRCC	1 cut(s)	1135
BsrDI	GCAATG	2 cut(s)	180, 1354
BsrI	ACTGG	2 cut(s)	65, 696
BssECI	CCNNGG	4 cut(s)	52, 362, 786, 1543
BssMI	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
BssSI	CACGAG	1 cut(s)	390
BssT1I	CCWWGG	4 cut(s)	52, 362, 786, 1543
Bst2BI	CACGAG	1 cut(s)	390
Bst2UI	CCWGG	5 cut(s)	807, 1119, 1335, 1446, 1588
Bst4CI	ACNGT	1 cut(s)	90
BstAPI	GCANNNNNTGC	3 cut(s)	816, 1310, 1344
BstBAI	YACGTR	2 cut(s)	170, 509
BstC8I	GCNNGC	3 cut(s)	294, 1041, 1428
BstDEI	CTNAG	7 cut(s)	658, 1044, 1150, 1186, 1389, 1438, 1599
BstDSI	CCRYGG	1 cut(s)	362
BstF5I	GGATG	3 cut(s)	23, 425, 926
BstHHI	GCGC	3 cut(s)	766, 1281, 1294
BstKTI	GATC	9 cut(s)	265, 328, 386, 656, 682, 779, 889, 1184, 1356
BstMAI	GTCTC	1 cut(s)	1439
BstMBI	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
BstMWI	GCNNNNNNNGC	5 cut(s)	483, 816, 1310, 1335, 1344
BstNI	CCWGG	5 cut(s)	807, 1119, 1335, 1446, 1588
BstNSI	RCATGY	2 cut(s)	610, 1279
BstSCI	CCNGG	5 cut(s)	805, 1117, 1333, 1444, 1586
BstSFI	CTRYAG	3 cut(s)	799, 830, 1358
BstSLI	GKGCMC	1 cut(s)	869
BstV1I	GCAGC	2 cut(s)	44, 1300
BstV2I	GAAGAC	1 cut(s)	1203
BstX2I	RGATCY	2 cut(s)	653, 1181
BstYI	RGATCY	2 cut(s)	653, 1181
Bsu15I	ATCGAT	1 cut(s)	775
BsuRI	GGCC	2 cut(s)	399, 1444
BsuTUI	ATCGAT	1 cut(s)	775
BtgI	CCRYGG	1 cut(s)	362
BtgZI	GCGATG	1 cut(s)	834
BtsCI	GGATG	3 cut(s)	23, 425, 926
BtsI	GCAGTG	2 cut(s)	474, 867
BtsIMutI	CAGTG	6 cut(s)	72, 474, 524, 867, 1397, 1408
BveI	ACCTGC	1 cut(s)	217
Cac8I	GCNNGC	3 cut(s)	294, 1041, 1428
CaiI	CAGNNNCTG	2 cut(s)	917, 1445
CfoI	GCGC	3 cut(s)	766, 1281, 1294
Cfr13I	GGNCC	2 cut(s)	206, 1442
ClaI	ATCGAT	1 cut(s)	775
Csp6I	GTAC	5 cut(s)	104, 159, 307, 506, 993
CviAII	CATG	7 cut(s)	127, 319, 363, 551, 607, 1079, 1276
CviQI	GTAC	5 cut(s)	104, 159, 307, 506, 993
DdeI	CTNAG	7 cut(s)	658, 1044, 1150, 1186, 1389, 1438, 1599
DpnI	GATC	9 cut(s)	264, 327, 385, 655, 681, 778, 888, 1183, 1355
DpnII	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
DraIII	CACNNNGTG	1 cut(s)	1423
EaeI	YGGCCR	1 cut(s)	397
Eco130I	CCWWGG	4 cut(s)	52, 362, 786, 1543
Eco47I	GGWCC	1 cut(s)	206
Eco72I	CACGTG	1 cut(s)	170
Eco88I	CYCGRG	1 cut(s)	338
EcoO109I	RGGNCCY	2 cut(s)	206, 1442
EcoRI	GAATTC	1 cut(s)	1363
EcoRII	CCWGG	5 cut(s)	805, 1117, 1333, 1444, 1586
EcoT14I	CCWWGG	4 cut(s)	52, 362, 786, 1543
EcoT22I	ATGCAT	1 cut(s)	128
ErhI	CCWWGG	4 cut(s)	52, 362, 786, 1543
FaeI	CATG	7 cut(s)	130, 322, 366, 554, 610, 1082, 1279
FaqI	GGGAC	1 cut(s)	76
FatI	CATG	7 cut(s)	126, 318, 362, 550, 606, 1078, 1275
FblI	GTMKAC	1 cut(s)	802
Fnu4HI	GCNGC	3 cut(s)	58, 636, 1314
FokI	GGATG	3 cut(s)	30, 432, 933
Fsp4HI	GCNGC	3 cut(s)	58, 636, 1314
FspBI	CTAG	7 cut(s)	47, 269, 449, 630, 903, 1158, 1224
FspI	TGCGCA	2 cut(s)	765, 1293
GlaI	GCGC	3 cut(s)	765, 1280, 1293
GluI	GCNGC	3 cut(s)	58, 636, 1314
HaeIII	GGCC	2 cut(s)	399, 1444
HapII	CCGG	3 cut(s)	186, 218, 651
HhaI	GCGC	3 cut(s)	766, 1281, 1294
Hin1II	CATG	7 cut(s)	130, 322, 366, 554, 610, 1082, 1279
Hin6I	GCGC	3 cut(s)	764, 1279, 1292
HinP1I	GCGC	3 cut(s)	764, 1279, 1292
HindIII	AAGCTT	1 cut(s)	232
HpaII	CCGG	3 cut(s)	186, 218, 651
HphI	GGTGA	3 cut(s)	854, 1409, 1499
Hpy166II	GTNNAC	4 cut(s)	803, 867, 1406, 1523
Hpy188I	TCNGA	4 cut(s)	891, 1016, 1237, 1369
Hpy188III	TCNNGA	6 cut(s)	218, 287, 602, 651, 1130, 1179
Hpy8I	GTNNAC	4 cut(s)	803, 867, 1406, 1523
HpyAV	CCTTC	4 cut(s)	74, 271, 449, 476
HpyCH4III	ACNGT	1 cut(s)	90
HpyCH4IV	ACGT	3 cut(s)	169, 508, 1519
HpyF10VI	GCNNNNNNNGC	5 cut(s)	483, 816, 1310, 1335, 1344
HpyF3I	CTNAG	7 cut(s)	658, 1044, 1150, 1186, 1389, 1438, 1599
HpySE526I	ACGT	3 cut(s)	169, 508, 1519
Hsp92II	CATG	7 cut(s)	130, 322, 366, 554, 610, 1082, 1279
HspAI	GCGC	3 cut(s)	764, 1279, 1292
Kpn2I	TCCGGA	2 cut(s)	217, 650
Kzo9I	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
LmnI	GCTCC	3 cut(s)	593, 988, 1121
Lsp1109I	GCAGC	2 cut(s)	44, 1300
LweI	GCATC	1 cut(s)	1313
MaeI	CTAG	7 cut(s)	47, 269, 449, 630, 903, 1158, 1224
MaeII	ACGT	3 cut(s)	169, 508, 1519
MaeIII	GTNAC	4 cut(s)	6, 250, 823, 1096
MalI	GATC	9 cut(s)	264, 327, 385, 655, 681, 778, 888, 1183, 1355
MboI	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
MboII	GAAGA	8 cut(s)	174, 229, 393, 1039, 1167, 1202, 1208, 1567
MflI	RGATCY	2 cut(s)	653, 1181
MhlI	GDGCHC	1 cut(s)	869
MluCI	AATT	9 cut(s)	313, 368, 373, 533, 642, 1089, 1165, 1245, 1363
MmeI	TCCRAC	1 cut(s)	1430
Mph1103I	ATGCAT	1 cut(s)	128
MroI	TCCGGA	2 cut(s)	217, 650
MseI	TTAA	5 cut(s)	242, 410, 729, 1032, 1461
MslI	CAYNNNNRTG	2 cut(s)	131, 1299
MspA1I	CMGCKG	3 cut(s)	296, 662, 1190
MspI	CCGG	3 cut(s)	186, 218, 651
MspR9I	CCNGG	5 cut(s)	807, 1119, 1335, 1446, 1588
MvaI	CCWGG	5 cut(s)	807, 1119, 1335, 1446, 1588
MwoI	GCNNNNNNNGC	5 cut(s)	483, 816, 1310, 1335, 1344
NcoI	CCATGG	1 cut(s)	362
NdeII	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
NlaIII	CATG	7 cut(s)	130, 322, 366, 554, 610, 1082, 1279
NlaIV	GGNNCC	4 cut(s)	345, 655, 1137, 1183
NmuCI	GTSAC	1 cut(s)	823
NsbI	TGCGCA	2 cut(s)	765, 1293
NsiI	ATGCAT	1 cut(s)	128
NspI	RCATGY	2 cut(s)	610, 1279
OliI	CACNNNNGTG	1 cut(s)	1299
PaeR7I	CTCGAG	1 cut(s)	338
PcsI	WCGNNNNNNNCGW	1 cut(s)	397
PkrI	GCNGC	3 cut(s)	59, 637, 1315
PmaCI	CACGTG	1 cut(s)	170
PmlI	CACGTG	1 cut(s)	170
Ppu21I	YACGTR	2 cut(s)	170, 509
PpuMI	RGGWCCY	1 cut(s)	206
PshBI	ATTAAT	1 cut(s)	1032
Psp5II	RGGWCCY	1 cut(s)	206
Psp6I	CCWGG	5 cut(s)	805, 1117, 1333, 1444, 1586
PspCI	CACGTG	1 cut(s)	170
PspGI	CCWGG	5 cut(s)	805, 1117, 1333, 1444, 1586
PspN4I	GGNNCC	4 cut(s)	345, 655, 1137, 1183
PspPI	GGNCC	2 cut(s)	206, 1442
PspPPI	RGGWCCY	1 cut(s)	206
PspXI	VCTCGAGB	1 cut(s)	338
PstI	CTGCAG	1 cut(s)	834
PstNI	CAGNNNCTG	2 cut(s)	917, 1445
PsuI	RGATCY	2 cut(s)	653, 1181
PvuII	CAGCTG	3 cut(s)	296, 662, 1190
RsaI	GTAC	5 cut(s)	105, 160, 308, 507, 994
RsaNI	GTAC	5 cut(s)	104, 159, 307, 506, 993
RseI	CAYNNNNRTG	2 cut(s)	131, 1299
SaqAI	TTAA	5 cut(s)	242, 410, 729, 1032, 1461
SatI	GCNGC	3 cut(s)	58, 636, 1314
Sau3AI	GATC	9 cut(s)	262, 325, 383, 653, 679, 776, 886, 1181, 1353
Sau96I	GGNCC	2 cut(s)	206, 1442
ScrFI	CCNGG	5 cut(s)	807, 1119, 1335, 1446, 1588
SduI	GDGCHC	1 cut(s)	869
SfaNI	GCATC	1 cut(s)	1313
SfcI	CTRYAG	3 cut(s)	799, 830, 1358
Sfr274I	CTCGAG	1 cut(s)	338
SinI	GGWCC	1 cut(s)	206
SlaI	CTCGAG	1 cut(s)	338
SmiMI	CAYNNNNRTG	2 cut(s)	131, 1299
SmlI	CTYRAG	1 cut(s)	338
SmoI	CTYRAG	1 cut(s)	338
SpeI	ACTAGT	1 cut(s)	1223
Sse9I	AATT	9 cut(s)	313, 368, 373, 533, 642, 1089, 1165, 1245, 1363
SsiI	CCGC	1 cut(s)	636
SspMI	CTAG	7 cut(s)	47, 269, 449, 630, 903, 1158, 1224
StyD4I	CCNGG	5 cut(s)	805, 1117, 1333, 1444, 1586
StyI	CCWWGG	4 cut(s)	52, 362, 786, 1543
TaaI	ACNGT	1 cut(s)	90
TaiI	ACGT	3 cut(s)	172, 511, 1522
TaqI	TCGA	3 cut(s)	339, 775, 975
TasI	AATT	9 cut(s)	313, 368, 373, 533, 642, 1089, 1165, 1245, 1363
TatI	WGTACW	1 cut(s)	306
TauI	GCSGC	1 cut(s)	638
Tru1I	TTAA	5 cut(s)	242, 410, 729, 1032, 1461
Tru9I	TTAA	5 cut(s)	242, 410, 729, 1032, 1461
TscAI	CASTG	6 cut(s)	72, 474, 524, 874, 1397, 1408
TseFI	GTSAC	1 cut(s)	823
TseI	GCWGC	2 cut(s)	57, 1313
Tsp45I	GTSAC	1 cut(s)	823
TspRI	CASTG	6 cut(s)	72, 474, 524, 874, 1397, 1408
VneI	GTGCAC	1 cut(s)	865
VpaK11BI	GGWCC	1 cut(s)	206
VspI	ATTAAT	1 cut(s)	1032
XapI	RAATTY	2 cut(s)	373, 1363
XceI	RCATGY	2 cut(s)	610, 1279
XhoI	CTCGAG	1 cut(s)	338
XmiI	GTMKAC	1 cut(s)	802
XspI	CTAG	7 cut(s)	47, 269, 449, 630, 903, 1158, 1224
Zsp2I	ATGCAT	1 cut(s)	128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.