B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 428 |
| Acc16I | TGCGCA | 2 cut(s) | 855, 1383 |
| Acc36I | ACCTGC | 1 cut(s) | 307 |
| AccI | GTMKAC | 2 cut(s) | 235, 892 |
| AccIII | TCCGGA | 1 cut(s) | 740 |
| AciI | CCGC | 1 cut(s) | 726 |
| AclWI | GGATC | 5 cut(s) | 738, 751, 1266, 1279, 1438 |
| AcoI | YGGCCR | 1 cut(s) | 487 |
| AcsI | RAATTY | 1 cut(s) | 1453 |
| AcvI | CACGTG | 1 cut(s) | 260 |
| AdeI | CACNNNGTG | 1 cut(s) | 1513 |
| AfaI | GTAC | 5 cut(s) | 189, 250, 398, 597, 1084 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 35, 641, 1169 |
| AflIII | ACRYGT | 1 cut(s) | 598 |
| AgsI | TTSAA | 6 cut(s) | 23, 463, 732, 793, 1090, 1321 |
| AhlI | ACTAGT | 1 cut(s) | 1313 |
| AjnI | CCWGG | 5 cut(s) | 895, 1207, 1423, 1534, 1676 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 129, 161, 1284, 1316 |
| AleI | CACNNNNGTG | 1 cut(s) | 1389 |
| Alw21I | GWGCWC | 1 cut(s) | 959 |
| Alw26I | GTCTC | 1 cut(s) | 1529 |
| Alw44I | GTGCAC | 1 cut(s) | 955 |
| AlwI | GGATC | 5 cut(s) | 738, 751, 1266, 1279, 1438 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1007, 1535 |
| Ama87I | CYCGRG | 1 cut(s) | 428 |
| Aor13HI | TCCGGA | 1 cut(s) | 740 |
| AoxI | GGCC | 2 cut(s) | 487, 1532 |
| ApaLI | GTGCAC | 1 cut(s) | 955 |
| ApeKI | GCWGC | 2 cut(s) | 141, 1403 |
| ApoI | RAATTY | 1 cut(s) | 1453 |
| AseI | ATTAAT | 1 cut(s) | 1122 |
| AspLEI | GCGC | 3 cut(s) | 856, 1371, 1384 |
| AspS9I | GGNCC | 2 cut(s) | 296, 1532 |
| AsuHPI | GGTGA | 3 cut(s) | 944, 1499, 1589 |
| AvaI | CYCGRG | 1 cut(s) | 428 |
| AvaII | GGWCC | 1 cut(s) | 296 |
| BaeGI | GKGCMC | 1 cut(s) | 959 |
| BamHI | GGATCC | 2 cut(s) | 743, 1271 |
| BauI | CACGAG | 1 cut(s) | 480 |
| BbrPI | CACGTG | 1 cut(s) | 260 |
| BbsI | GAAGAC | 1 cut(s) | 1293 |
| Bbv12I | GWGCWC | 1 cut(s) | 959 |
| BbvCI | CCTCAGC | 3 cut(s) | 748, 1134, 1276 |
| BbvI | GCAGC | 2 cut(s) | 128, 1390 |
| BccI | CCATC | 6 cut(s) | 96, 281, 356, 504, 650, 1005 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 758, 792, 845, 879 |
| BciT130I | CCWGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| BclI | TGATCA | 1 cut(s) | 7 |
| BcoDI | GTCTC | 1 cut(s) | 1529 |
| BcuI | ACTAGT | 1 cut(s) | 1313 |
| BfaI | CTAG | 7 cut(s) | 131, 359, 539, 720, 993, 1248, 1314 |
| BfmI | CTRYAG | 3 cut(s) | 889, 920, 1448 |
| BfuAI | ACCTGC | 1 cut(s) | 307 |
| BisI | GCNGC | 3 cut(s) | 142, 726, 1404 |
| BlsI | GCNGC | 3 cut(s) | 143, 727, 1405 |
| Bme1390I | CCNGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| Bme18I | GGWCC | 1 cut(s) | 296 |
| BmeT110I | CYCGRG | 1 cut(s) | 428 |
| BmgT120I | GGNCC | 2 cut(s) | 296, 1532 |
| BmiI | GGNNCC | 3 cut(s) | 435, 745, 1273 |
| BmrFI | CCNGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| BmsI | GCATC | 1 cut(s) | 1403 |
| BpiI | GAAGAC | 1 cut(s) | 1293 |
| Bpu10I | CCTNAGC | 3 cut(s) | 748, 1134, 1276 |
| Bsa29I | ATCGAT | 1 cut(s) | 865 |
| BsaAI | YACGTR | 2 cut(s) | 260, 599 |
| BsaBI | GATNNNNATC | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| BsaWI | WCCGGW | 1 cut(s) | 740 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 636, 666 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 35, 641, 1169 |
| Bse1I | ACTGG | 2 cut(s) | 149, 786 |
| Bse3DI | GCAATG | 2 cut(s) | 270, 1444 |
| Bse8I | GATNNNNATC | 1 cut(s) | 351 |
| BseAI | TCCGGA | 1 cut(s) | 740 |
| BseBI | CCWGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| BseCI | ATCGAT | 1 cut(s) | 865 |
| BseDI | CCNNGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| BseGI | GGATG | 3 cut(s) | 107, 515, 1016 |
| BseJI | GATNNNNATC | 1 cut(s) | 351 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 35, 641, 1169 |
| BseMI | GCAATG | 2 cut(s) | 270, 1444 |
| BseMII | CTCAG | 6 cut(s) | 73, 762, 1125, 1290, 1493, 1542 |
| BseNI | ACTGG | 2 cut(s) | 149, 786 |
| BseRI | GAGGAG | 5 cut(s) | 660, 663, 1091, 1188, 1475 |
| BseSI | GKGCMC | 1 cut(s) | 959 |
| BseXI | GCAGC | 2 cut(s) | 128, 1390 |
| BshFI | GGCC | 2 cut(s) | 489, 1534 |
| BshVI | ATCGAT | 1 cut(s) | 865 |
| BsiHKAI | GWGCWC | 1 cut(s) | 959 |
| BsiHKCI | CYCGRG | 1 cut(s) | 428 |
| BsiSI | CCGG | 2 cut(s) | 276, 741 |
| BslFI | GGGAC | 2 cut(s) | 11, 160 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 35, 641, 1169 |
| BsmAI | GTCTC | 1 cut(s) | 1529 |
| BsmFI | GGGAC | 2 cut(s) | 11, 160 |
| BsnI | GGCC | 2 cut(s) | 489, 1534 |
| BsoBI | CYCGRG | 1 cut(s) | 428 |
| Bsp1286I | GDGCHC | 1 cut(s) | 959 |
| Bsp13I | TCCGGA | 1 cut(s) | 740 |
| Bsp1407I | TGTACA | 1 cut(s) | 248 |
| Bsp19I | CCATGG | 2 cut(s) | 44, 452 |
| BspACI | CCGC | 1 cut(s) | 726 |
| BspANI | GGCC | 2 cut(s) | 489, 1534 |
| BspCNI | CTCAG | 6 cut(s) | 72, 761, 1126, 1289, 1492, 1541 |
| BspDI | ATCGAT | 1 cut(s) | 865 |
| BspEI | TCCGGA | 1 cut(s) | 740 |
| BspLI | GGNNCC | 3 cut(s) | 435, 745, 1273 |
| BspMAI | CTGCAG | 1 cut(s) | 924 |
| BspMI | ACCTGC | 1 cut(s) | 307 |
| BspPI | GGATC | 5 cut(s) | 738, 751, 1266, 1279, 1438 |
| BsrDI | GCAATG | 2 cut(s) | 270, 1444 |
| BsrGI | TGTACA | 1 cut(s) | 248 |
| BsrI | ACTGG | 2 cut(s) | 149, 786 |
| BssECI | CCNNGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| BssSI | CACGAG | 1 cut(s) | 480 |
| BssT1I | CCWWGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| Bst2BI | CACGAG | 1 cut(s) | 480 |
| Bst2UI | CCWGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| Bst4CI | ACNGT | 2 cut(s) | 35, 174 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 906, 1400, 1434 |
| BstAUI | TGTACA | 1 cut(s) | 248 |
| BstBAI | YACGTR | 2 cut(s) | 260, 599 |
| BstC8I | GCNNGC | 3 cut(s) | 384, 1131, 1518 |
| BstDEI | CTNAG | 8 cut(s) | 59, 748, 1134, 1240, 1276, 1479, 1528, 1689 |
| BstDSI | CCRYGG | 2 cut(s) | 44, 452 |
| BstF5I | GGATG | 3 cut(s) | 107, 515, 1016 |
| BstHHI | GCGC | 3 cut(s) | 856, 1371, 1384 |
| BstMAI | GTCTC | 1 cut(s) | 1529 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 573, 906, 1400, 1425, 1434 |
| BstNI | CCWGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| BstNSI | RCATGY | 2 cut(s) | 700, 1369 |
| BstSCI | CCNGG | 5 cut(s) | 895, 1207, 1423, 1534, 1676 |
| BstSFI | CTRYAG | 3 cut(s) | 889, 920, 1448 |
| BstSLI | GKGCMC | 1 cut(s) | 959 |
| BstV1I | GCAGC | 2 cut(s) | 128, 1390 |
| BstV2I | GAAGAC | 1 cut(s) | 1293 |
| BstX2I | RGATCY | 2 cut(s) | 743, 1271 |
| BstYI | RGATCY | 2 cut(s) | 743, 1271 |
| Bsu15I | ATCGAT | 1 cut(s) | 865 |
| BsuRI | GGCC | 2 cut(s) | 489, 1534 |
| BsuTUI | ATCGAT | 1 cut(s) | 865 |
| BtgI | CCRYGG | 2 cut(s) | 44, 452 |
| BtgZI | GCGATG | 1 cut(s) | 924 |
| BtsCI | GGATG | 3 cut(s) | 107, 515, 1016 |
| BtsI | GCAGTG | 2 cut(s) | 564, 957 |
| BtsIMutI | CAGTG | 6 cut(s) | 156, 564, 614, 957, 1487, 1498 |
| BveI | ACCTGC | 1 cut(s) | 307 |
| Cac8I | GCNNGC | 3 cut(s) | 384, 1131, 1518 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1007, 1535 |
| CfoI | GCGC | 3 cut(s) | 856, 1371, 1384 |
| Cfr13I | GGNCC | 2 cut(s) | 296, 1532 |
| ClaI | ATCGAT | 1 cut(s) | 865 |
| Csp6I | GTAC | 5 cut(s) | 188, 249, 397, 596, 1083 |
| CviAII | CATG | 8 cut(s) | 45, 211, 409, 453, 641, 697, 1169, 1366 |
| CviQI | GTAC | 5 cut(s) | 188, 249, 397, 596, 1083 |
| DdeI | CTNAG | 8 cut(s) | 59, 748, 1134, 1240, 1276, 1479, 1528, 1689 |
| DraIII | CACNNNGTG | 1 cut(s) | 1513 |
| EaeI | YGGCCR | 1 cut(s) | 487 |
| Eco130I | CCWWGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| Eco47I | GGWCC | 1 cut(s) | 296 |
| Eco72I | CACGTG | 1 cut(s) | 260 |
| Eco88I | CYCGRG | 1 cut(s) | 428 |
| EcoO109I | RGGNCCY | 2 cut(s) | 296, 1532 |
| EcoRI | GAATTC | 1 cut(s) | 1453 |
| EcoRII | CCWGG | 5 cut(s) | 895, 1207, 1423, 1534, 1676 |
| EcoT14I | CCWWGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| EcoT22I | ATGCAT | 1 cut(s) | 212 |
| ErhI | CCWWGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| FaeI | CATG | 8 cut(s) | 48, 214, 412, 456, 644, 700, 1172, 1369 |
| FaqI | GGGAC | 2 cut(s) | 11, 160 |
| FatI | CATG | 8 cut(s) | 44, 210, 408, 452, 640, 696, 1168, 1365 |
| FbaI | TGATCA | 1 cut(s) | 7 |
| FblI | GTMKAC | 2 cut(s) | 235, 892 |
| Fnu4HI | GCNGC | 3 cut(s) | 142, 726, 1404 |
| FokI | GGATG | 3 cut(s) | 114, 522, 1023 |
| Fsp4HI | GCNGC | 3 cut(s) | 142, 726, 1404 |
| FspBI | CTAG | 7 cut(s) | 131, 359, 539, 720, 993, 1248, 1314 |
| FspI | TGCGCA | 2 cut(s) | 855, 1383 |
| GlaI | GCGC | 3 cut(s) | 855, 1370, 1383 |
| GluI | GCNGC | 3 cut(s) | 142, 726, 1404 |
| HaeIII | GGCC | 2 cut(s) | 489, 1534 |
| HapII | CCGG | 2 cut(s) | 276, 741 |
| HhaI | GCGC | 3 cut(s) | 856, 1371, 1384 |
| Hin1II | CATG | 8 cut(s) | 48, 214, 412, 456, 644, 700, 1172, 1369 |
| Hin6I | GCGC | 3 cut(s) | 854, 1369, 1382 |
| HinP1I | GCGC | 3 cut(s) | 854, 1369, 1382 |
| HpaII | CCGG | 2 cut(s) | 276, 741 |
| HphI | GGTGA | 3 cut(s) | 944, 1499, 1589 |
| Hpy166II | GTNNAC | 7 cut(s) | 80, 236, 249, 893, 957, 1496, 1613 |
| Hpy188I | TCNGA | 6 cut(s) | 62, 321, 981, 1106, 1327, 1459 |
| Hpy188III | TCNNGA | 6 cut(s) | 308, 377, 692, 741, 1220, 1269 |
| Hpy8I | GTNNAC | 7 cut(s) | 80, 236, 249, 893, 957, 1496, 1613 |
| HpyAV | CCTTC | 4 cut(s) | 158, 361, 539, 566 |
| HpyCH4III | ACNGT | 2 cut(s) | 35, 174 |
| HpyCH4IV | ACGT | 3 cut(s) | 259, 598, 1609 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 573, 906, 1400, 1425, 1434 |
| HpyF3I | CTNAG | 8 cut(s) | 59, 748, 1134, 1240, 1276, 1479, 1528, 1689 |
| HpySE526I | ACGT | 3 cut(s) | 259, 598, 1609 |
| Hsp92II | CATG | 8 cut(s) | 48, 214, 412, 456, 644, 700, 1172, 1369 |
| HspAI | GCGC | 3 cut(s) | 854, 1369, 1382 |
| Kpn2I | TCCGGA | 1 cut(s) | 740 |
| Ksp22I | TGATCA | 1 cut(s) | 7 |
| LmnI | GCTCC | 3 cut(s) | 683, 1078, 1211 |
| Lsp1109I | GCAGC | 2 cut(s) | 128, 1390 |
| LweI | GCATC | 1 cut(s) | 1403 |
| MaeI | CTAG | 7 cut(s) | 131, 359, 539, 720, 993, 1248, 1314 |
| MaeII | ACGT | 3 cut(s) | 259, 598, 1609 |
| MaeIII | GTNAC | 4 cut(s) | 90, 340, 913, 1186 |
| MboII | GAAGA | 9 cut(s) | 264, 319, 483, 1129, 1257, 1292, 1298, 1616, 1657 |
| MflI | RGATCY | 2 cut(s) | 743, 1271 |
| MhlI | GDGCHC | 1 cut(s) | 959 |
| MluCI | AATT | 9 cut(s) | 403, 458, 464, 623, 732, 1179, 1255, 1335, 1453 |
| MmeI | TCCRAC | 1 cut(s) | 1520 |
| Mph1103I | ATGCAT | 1 cut(s) | 212 |
| MroI | TCCGGA | 1 cut(s) | 740 |
| MseI | TTAA | 5 cut(s) | 332, 500, 819, 1122, 1551 |
| MslI | CAYNNNNRTG | 2 cut(s) | 215, 1389 |
| MspA1I | CMGCKG | 3 cut(s) | 386, 752, 1280 |
| MspI | CCGG | 2 cut(s) | 276, 741 |
| MspR9I | CCNGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| MvaI | CCWGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 573, 906, 1400, 1425, 1434 |
| NcoI | CCATGG | 2 cut(s) | 44, 452 |
| NlaIII | CATG | 8 cut(s) | 48, 214, 412, 456, 644, 700, 1172, 1369 |
| NlaIV | GGNNCC | 3 cut(s) | 435, 745, 1273 |
| NmuCI | GTSAC | 1 cut(s) | 913 |
| NsbI | TGCGCA | 2 cut(s) | 855, 1383 |
| NsiI | ATGCAT | 1 cut(s) | 212 |
| NspI | RCATGY | 2 cut(s) | 700, 1369 |
| OliI | CACNNNNGTG | 1 cut(s) | 1389 |
| PaeR7I | CTCGAG | 1 cut(s) | 428 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 487 |
| PkrI | GCNGC | 3 cut(s) | 143, 727, 1405 |
| PmaCI | CACGTG | 1 cut(s) | 260 |
| PmlI | CACGTG | 1 cut(s) | 260 |
| Ppu21I | YACGTR | 2 cut(s) | 260, 599 |
| PpuMI | RGGWCCY | 1 cut(s) | 296 |
| PshBI | ATTAAT | 1 cut(s) | 1122 |
| Psp5II | RGGWCCY | 1 cut(s) | 296 |
| Psp6I | CCWGG | 5 cut(s) | 895, 1207, 1423, 1534, 1676 |
| PspCI | CACGTG | 1 cut(s) | 260 |
| PspGI | CCWGG | 5 cut(s) | 895, 1207, 1423, 1534, 1676 |
| PspN4I | GGNNCC | 3 cut(s) | 435, 745, 1273 |
| PspPI | GGNCC | 2 cut(s) | 296, 1532 |
| PspPPI | RGGWCCY | 1 cut(s) | 296 |
| PspXI | VCTCGAGB | 1 cut(s) | 428 |
| PstI | CTGCAG | 1 cut(s) | 924 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1007, 1535 |
| PsuI | RGATCY | 2 cut(s) | 743, 1271 |
| PvuII | CAGCTG | 3 cut(s) | 386, 752, 1280 |
| RsaI | GTAC | 5 cut(s) | 189, 250, 398, 597, 1084 |
| RsaNI | GTAC | 5 cut(s) | 188, 249, 397, 596, 1083 |
| RseI | CAYNNNNRTG | 2 cut(s) | 215, 1389 |
| SaqAI | TTAA | 5 cut(s) | 332, 500, 819, 1122, 1551 |
| SatI | GCNGC | 3 cut(s) | 142, 726, 1404 |
| Sau96I | GGNCC | 2 cut(s) | 296, 1532 |
| ScrFI | CCNGG | 5 cut(s) | 897, 1209, 1425, 1536, 1678 |
| SduI | GDGCHC | 1 cut(s) | 959 |
| SfaNI | GCATC | 1 cut(s) | 1403 |
| SfcI | CTRYAG | 3 cut(s) | 889, 920, 1448 |
| Sfr274I | CTCGAG | 1 cut(s) | 428 |
| SinI | GGWCC | 1 cut(s) | 296 |
| SlaI | CTCGAG | 1 cut(s) | 428 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 215, 1389 |
| SmlI | CTYRAG | 1 cut(s) | 428 |
| SmoI | CTYRAG | 1 cut(s) | 428 |
| SpeI | ACTAGT | 1 cut(s) | 1313 |
| Sse9I | AATT | 9 cut(s) | 403, 458, 464, 623, 732, 1179, 1255, 1335, 1453 |
| SsiI | CCGC | 1 cut(s) | 726 |
| SspMI | CTAG | 7 cut(s) | 131, 359, 539, 720, 993, 1248, 1314 |
| StyD4I | CCNGG | 5 cut(s) | 895, 1207, 1423, 1534, 1676 |
| StyI | CCWWGG | 5 cut(s) | 44, 136, 452, 876, 1633 |
| TaaI | ACNGT | 2 cut(s) | 35, 174 |
| TaiI | ACGT | 3 cut(s) | 262, 601, 1612 |
| TaqI | TCGA | 4 cut(s) | 54, 429, 865, 1065 |
| TasI | AATT | 9 cut(s) | 403, 458, 464, 623, 732, 1179, 1255, 1335, 1453 |
| TatI | WGTACW | 2 cut(s) | 248, 396 |
| TauI | GCSGC | 1 cut(s) | 728 |
| Tru1I | TTAA | 5 cut(s) | 332, 500, 819, 1122, 1551 |
| Tru9I | TTAA | 5 cut(s) | 332, 500, 819, 1122, 1551 |
| TscAI | CASTG | 6 cut(s) | 156, 564, 614, 964, 1487, 1498 |
| TseFI | GTSAC | 1 cut(s) | 913 |
| TseI | GCWGC | 2 cut(s) | 141, 1403 |
| Tsp45I | GTSAC | 1 cut(s) | 913 |
| TspRI | CASTG | 6 cut(s) | 156, 564, 614, 964, 1487, 1498 |
| VneI | GTGCAC | 1 cut(s) | 955 |
| VpaK11BI | GGWCC | 1 cut(s) | 296 |
| VspI | ATTAAT | 1 cut(s) | 1122 |
| XapI | RAATTY | 1 cut(s) | 1453 |
| XceI | RCATGY | 2 cut(s) | 700, 1369 |
| XhoI | CTCGAG | 1 cut(s) | 428 |
| XmiI | GTMKAC | 2 cut(s) | 235, 892 |
| XspI | CTAG | 7 cut(s) | 131, 359, 539, 720, 993, 1248, 1314 |
| Zsp2I | ATGCAT | 1 cut(s) | 212 |