B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 318, 611 |
| Acc65I | GGTACC | 1 cut(s) | 181 |
| AccB1I | GGYRCC | 1 cut(s) | 181 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 929 |
| AccII | CGCG | 2 cut(s) | 390, 1352 |
| AciI | CCGC | 1 cut(s) | 390 |
| AclWI | GGATC | 5 cut(s) | 400, 492, 505, 1236, 1249 |
| AcoI | YGGCCR | 5 cut(s) | 3, 203, 235, 941, 973 |
| AcsI | RAATTY | 2 cut(s) | 487, 1422 |
| AfaI | GTAC | 6 cut(s) | 183, 380, 823, 1160, 1545, 1582 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 389, 929, 1127 |
| AflIII | ACRYGT | 1 cut(s) | 1381 |
| AgsI | TTSAA | 9 cut(s) | 33, 212, 465, 486, 547, 950, 1291, 1428, 1588 |
| AhlI | ACTAGT | 1 cut(s) | 1283 |
| AjiI | CACGTC | 2 cut(s) | 17, 44 |
| AjnI | CCWGG | 2 cut(s) | 1029, 1393 |
| Alw21I | GWGCWC | 1 cut(s) | 439 |
| Alw26I | GTCTC | 3 cut(s) | 34, 188, 860 |
| AlwI | GGATC | 5 cut(s) | 400, 492, 505, 1236, 1249 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1505 |
| Ama87I | CYCGRG | 1 cut(s) | 502 |
| AoxI | GGCC | 5 cut(s) | 3, 203, 235, 941, 973 |
| ApeKI | GCWGC | 2 cut(s) | 470, 1341 |
| ApoI | RAATTY | 2 cut(s) | 487, 1422 |
| Asp718I | GGTACC | 1 cut(s) | 181 |
| AspLEI | GCGC | 4 cut(s) | 348, 653, 1086, 1352 |
| AspS9I | GGNCC | 1 cut(s) | 1027 |
| AsuHPI | GGTGA | 4 cut(s) | 812, 1042, 1423, 1475 |
| AvaI | CYCGRG | 1 cut(s) | 502 |
| AvaII | GGWCC | 1 cut(s) | 1027 |
| BaeGI | GKGCMC | 1 cut(s) | 49 |
| BalI | TGGCCA | 3 cut(s) | 5, 205, 943 |
| BamHI | GGATCC | 2 cut(s) | 497, 1241 |
| BanI | GGYRCC | 1 cut(s) | 181 |
| BanII | GRGCYC | 1 cut(s) | 439 |
| BauI | CACGAG | 1 cut(s) | 228 |
| BbsI | GAAGAC | 2 cut(s) | 168, 1650 |
| Bbv12I | GWGCWC | 1 cut(s) | 439 |
| BbvI | GCAGC | 2 cut(s) | 482, 1328 |
| BccI | CCATC | 6 cut(s) | 104, 124, 252, 401, 990, 1372 |
| BceAI | ACGGC | 1 cut(s) | 857 |
| BciT130I | CCWGG | 2 cut(s) | 1031, 1395 |
| BciVI | GTATCC | 1 cut(s) | 290 |
| BclI | TGATCA | 1 cut(s) | 570 |
| BcoDI | GTCTC | 3 cut(s) | 34, 188, 860 |
| BcuI | ACTAGT | 1 cut(s) | 1283 |
| BfaI | CTAG | 5 cut(s) | 287, 474, 1079, 1218, 1284 |
| BfmI | CTRYAG | 2 cut(s) | 671, 1387 |
| BfoI | RGCGCY | 1 cut(s) | 654 |
| BfuI | GTATCC | 1 cut(s) | 290 |
| BisI | GCNGC | 2 cut(s) | 471, 1342 |
| BlsI | GCNGC | 2 cut(s) | 472, 1343 |
| Bme1390I | CCNGG | 2 cut(s) | 1031, 1395 |
| Bme18I | GGWCC | 1 cut(s) | 1027 |
| BmeT110I | CYCGRG | 1 cut(s) | 502 |
| BmgBI | CACGTC | 2 cut(s) | 17, 44 |
| BmgT120I | GGNCC | 1 cut(s) | 1027 |
| BmiI | GGNNCC | 4 cut(s) | 183, 499, 921, 1243 |
| BmrFI | CCNGG | 2 cut(s) | 1031, 1395 |
| BmsI | GCATC | 1 cut(s) | 626 |
| BpiI | GAAGAC | 2 cut(s) | 168, 1650 |
| BpmI | CTGGAG | 1 cut(s) | 663 |
| BpuEI | CTTGAG | 2 cut(s) | 161, 899 |
| BsaJI | CCNNGG | 4 cut(s) | 340, 501, 1030, 1374 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 389, 929, 1127 |
| Bse1I | ACTGG | 2 cut(s) | 1100, 1224 |
| BseBI | CCWGG | 2 cut(s) | 1031, 1395 |
| BseDI | CCNNGG | 4 cut(s) | 340, 501, 1030, 1374 |
| BseGI | GGATG | 3 cut(s) | 263, 984, 1001 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 389, 929, 1127 |
| BseMII | CTCAG | 3 cut(s) | 717, 855, 1330 |
| BseNI | ACTGG | 2 cut(s) | 1100, 1224 |
| BseRI | GAGGAG | 2 cut(s) | 1146, 1589 |
| BseSI | GKGCMC | 1 cut(s) | 49 |
| BseXI | GCAGC | 2 cut(s) | 482, 1328 |
| Bsh1236I | CGCG | 2 cut(s) | 390, 1352 |
| BshFI | GGCC | 5 cut(s) | 5, 205, 237, 943, 975 |
| BshNI | GGYRCC | 1 cut(s) | 181 |
| BsiHKAI | GWGCWC | 1 cut(s) | 439 |
| BsiHKCI | CYCGRG | 1 cut(s) | 502 |
| BsiSI | CCGG | 1 cut(s) | 976 |
| BslFI | GGGAC | 2 cut(s) | 652, 946 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 389, 929, 1127 |
| BsmAI | GTCTC | 3 cut(s) | 34, 188, 860 |
| BsmBI | CGTCTC | 1 cut(s) | 34 |
| BsmFI | GGGAC | 2 cut(s) | 652, 946 |
| BsmI | GAATGC | 1 cut(s) | 328 |
| BsnI | GGCC | 5 cut(s) | 5, 205, 237, 943, 975 |
| BsoBI | CYCGRG | 1 cut(s) | 502 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 439 |
| Bsp1407I | TGTACA | 1 cut(s) | 821 |
| Bsp143I | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| BspACI | CCGC | 1 cut(s) | 390 |
| BspANI | GGCC | 5 cut(s) | 5, 205, 237, 943, 975 |
| BspCNI | CTCAG | 3 cut(s) | 718, 856, 1329 |
| BspFNI | CGCG | 2 cut(s) | 390, 1352 |
| BspLI | GGNNCC | 4 cut(s) | 183, 499, 921, 1243 |
| BspMAI | CTGCAG | 1 cut(s) | 1391 |
| BspPI | GGATC | 5 cut(s) | 400, 492, 505, 1236, 1249 |
| BspT107I | GGYRCC | 1 cut(s) | 181 |
| BsrGI | TGTACA | 1 cut(s) | 821 |
| BsrI | ACTGG | 2 cut(s) | 1100, 1224 |
| BssECI | CCNNGG | 4 cut(s) | 340, 501, 1030, 1374 |
| BssMI | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| BssSI | CACGAG | 1 cut(s) | 228 |
| BssT1I | CCWWGG | 2 cut(s) | 340, 1374 |
| Bst2BI | CACGAG | 1 cut(s) | 228 |
| Bst2UI | CCWGG | 2 cut(s) | 1031, 1395 |
| Bst4CI | ACNGT | 4 cut(s) | 155, 542, 1459, 1472 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 623, 1404 |
| BstAUI | TGTACA | 1 cut(s) | 821 |
| BstC8I | GCNNGC | 3 cut(s) | 326, 449, 649 |
| BstDEI | CTNAG | 3 cut(s) | 726, 864, 1316 |
| BstEII | GGTNACC | 1 cut(s) | 1411 |
| BstF5I | GGATG | 3 cut(s) | 263, 984, 1001 |
| BstFNI | CGCG | 2 cut(s) | 390, 1352 |
| BstH2I | RGCGCY | 1 cut(s) | 654 |
| BstHHI | GCGC | 4 cut(s) | 348, 653, 1086, 1352 |
| BstKTI | GATC | 6 cut(s) | 395, 500, 573, 1244, 1270, 1620 |
| BstMAI | GTCTC | 3 cut(s) | 34, 188, 860 |
| BstMBI | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 44, 476, 623, 1347, 1395, 1404 |
| BstNI | CCWGG | 2 cut(s) | 1031, 1395 |
| BstNSI | RCATGY | 2 cut(s) | 451, 1385 |
| BstPI | GGTNACC | 1 cut(s) | 1411 |
| BstSCI | CCNGG | 2 cut(s) | 1029, 1393 |
| BstSFI | CTRYAG | 2 cut(s) | 671, 1387 |
| BstSLI | GKGCMC | 1 cut(s) | 49 |
| BstUI | CGCG | 2 cut(s) | 390, 1352 |
| BstV1I | GCAGC | 2 cut(s) | 482, 1328 |
| BstV2I | GAAGAC | 2 cut(s) | 168, 1650 |
| BstX2I | RGATCY | 2 cut(s) | 497, 1241 |
| BstYI | RGATCY | 2 cut(s) | 497, 1241 |
| BsuI | GTATCC | 1 cut(s) | 290 |
| BsuRI | GGCC | 5 cut(s) | 5, 205, 237, 943, 975 |
| BtrI | CACGTC | 2 cut(s) | 17, 44 |
| BtsCI | GGATG | 3 cut(s) | 263, 984, 1001 |
| BtsIMutI | CAGTG | 5 cut(s) | 90, 723, 1093, 1455, 1477 |
| Cac8I | GCNNGC | 3 cut(s) | 326, 449, 649 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1505 |
| CfoI | GCGC | 4 cut(s) | 348, 653, 1086, 1352 |
| Cfr13I | GGNCC | 1 cut(s) | 1027 |
| Csp6I | GTAC | 6 cut(s) | 182, 379, 822, 1159, 1544, 1581 |
| CviAII | CATG | 8 cut(s) | 440, 448, 936, 1127, 1382, 1404, 1547, 1654 |
| CviQI | GTAC | 6 cut(s) | 182, 379, 822, 1159, 1544, 1581 |
| DdeI | CTNAG | 3 cut(s) | 726, 864, 1316 |
| DpnI | GATC | 6 cut(s) | 394, 499, 572, 1243, 1269, 1619 |
| DpnII | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| EaeI | YGGCCR | 5 cut(s) | 3, 203, 235, 941, 973 |
| Ecl136II | GAGCTC | 1 cut(s) | 437 |
| Eco130I | CCWWGG | 2 cut(s) | 340, 1374 |
| Eco24I | GRGCYC | 1 cut(s) | 439 |
| Eco47I | GGWCC | 1 cut(s) | 1027 |
| Eco53kI | GAGCTC | 1 cut(s) | 437 |
| Eco88I | CYCGRG | 1 cut(s) | 502 |
| Eco91I | GGTNACC | 1 cut(s) | 1411 |
| EcoICRI | GAGCTC | 1 cut(s) | 437 |
| EcoO65I | GGTNACC | 1 cut(s) | 1411 |
| EcoRII | CCWGG | 2 cut(s) | 1029, 1393 |
| EcoT14I | CCWWGG | 2 cut(s) | 340, 1374 |
| EcoT38I | GRGCYC | 1 cut(s) | 439 |
| ErhI | CCWWGG | 2 cut(s) | 340, 1374 |
| Esp3I | CGTCTC | 1 cut(s) | 34 |
| FaeI | CATG | 8 cut(s) | 443, 451, 939, 1130, 1385, 1407, 1550, 1657 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 604, 636 |
| FaqI | GGGAC | 2 cut(s) | 652, 946 |
| FatI | CATG | 8 cut(s) | 439, 447, 935, 1126, 1381, 1403, 1546, 1653 |
| FbaI | TGATCA | 1 cut(s) | 570 |
| Fnu4HI | GCNGC | 2 cut(s) | 471, 1342 |
| FokI | GGATG | 3 cut(s) | 270, 991, 1008 |
| FriOI | GRGCYC | 1 cut(s) | 439 |
| Fsp4HI | GCNGC | 2 cut(s) | 471, 1342 |
| FspBI | CTAG | 5 cut(s) | 287, 474, 1079, 1218, 1284 |
| GlaI | GCGC | 4 cut(s) | 347, 652, 1085, 1351 |
| GluI | GCNGC | 2 cut(s) | 471, 1342 |
| GsuI | CTGGAG | 1 cut(s) | 663 |
| HaeII | RGCGCY | 1 cut(s) | 654 |
| HaeIII | GGCC | 5 cut(s) | 5, 205, 237, 943, 975 |
| HapII | CCGG | 1 cut(s) | 976 |
| HhaI | GCGC | 4 cut(s) | 348, 653, 1086, 1352 |
| Hin1II | CATG | 8 cut(s) | 443, 451, 939, 1130, 1385, 1407, 1550, 1657 |
| Hin6I | GCGC | 4 cut(s) | 346, 651, 1084, 1350 |
| HinP1I | GCGC | 4 cut(s) | 346, 651, 1084, 1350 |
| HindIII | AAGCTT | 1 cut(s) | 70 |
| HinfI | GANTC | 5 cut(s) | 62, 164, 676, 728, 902 |
| HpaII | CCGG | 1 cut(s) | 976 |
| HphI | GGTGA | 4 cut(s) | 812, 1042, 1423, 1475 |
| Hpy166II | GTNNAC | 2 cut(s) | 824, 1050 |
| Hpy188I | TCNGA | 4 cut(s) | 107, 553, 1297, 1319 |
| Hpy8I | GTNNAC | 2 cut(s) | 824, 1050 |
| HpyAV | CCTTC | 4 cut(s) | 109, 791, 1052, 1507 |
| HpyCH4III | ACNGT | 4 cut(s) | 155, 542, 1459, 1472 |
| HpyCH4IV | ACGT | 2 cut(s) | 16, 43 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 44, 476, 623, 1347, 1395, 1404 |
| HpyF3I | CTNAG | 3 cut(s) | 726, 864, 1316 |
| HpySE526I | ACGT | 2 cut(s) | 16, 43 |
| Hsp92II | CATG | 8 cut(s) | 443, 451, 939, 1130, 1385, 1407, 1550, 1657 |
| HspAI | GCGC | 4 cut(s) | 346, 651, 1084, 1350 |
| KpnI | GGTACC | 1 cut(s) | 185 |
| Ksp22I | TGATCA | 1 cut(s) | 570 |
| Kzo9I | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| LmnI | GCTCC | 3 cut(s) | 925, 1181, 1576 |
| Lsp1109I | GCAGC | 2 cut(s) | 482, 1328 |
| LweI | GCATC | 1 cut(s) | 626 |
| MaeI | CTAG | 5 cut(s) | 287, 474, 1079, 1218, 1284 |
| MaeII | ACGT | 2 cut(s) | 16, 43 |
| MaeIII | GTNAC | 4 cut(s) | 88, 659, 984, 1411 |
| MalI | GATC | 6 cut(s) | 394, 499, 572, 1243, 1269, 1619 |
| MboI | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| MboII | GAAGA | 5 cut(s) | 21, 173, 806, 1627, 1655 |
| MfeI | CAATTG | 2 cut(s) | 207, 945 |
| MflI | RGATCY | 2 cut(s) | 497, 1241 |
| MhlI | GDGCHC | 2 cut(s) | 49, 439 |
| MlsI | TGGCCA | 3 cut(s) | 5, 205, 943 |
| MluNI | TGGCCA | 3 cut(s) | 5, 205, 943 |
| MlyI | GAGTC | 5 cut(s) | 56, 158, 670, 737, 911 |
| MmeI | TCCRAC | 3 cut(s) | 743, 1253, 1490 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 205, 943 |
| MscI | TGGCCA | 3 cut(s) | 5, 205, 943 |
| MseI | TTAA | 4 cut(s) | 81, 750, 774, 1521 |
| MslI | CAYNNNNRTG | 3 cut(s) | 360, 519, 1098 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 205, 943 |
| MspI | CCGG | 1 cut(s) | 976 |
| MspR9I | CCNGG | 2 cut(s) | 1031, 1395 |
| MunI | CAATTG | 2 cut(s) | 207, 945 |
| Mva1269I | GAATGC | 1 cut(s) | 328 |
| MvaI | CCWGG | 2 cut(s) | 1031, 1395 |
| MvnI | CGCG | 2 cut(s) | 390, 1352 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 44, 476, 623, 1347, 1395, 1404 |
| NdeII | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| NlaIII | CATG | 8 cut(s) | 443, 451, 939, 1130, 1385, 1407, 1550, 1657 |
| NlaIV | GGNNCC | 4 cut(s) | 183, 499, 921, 1243 |
| NmuCI | GTSAC | 3 cut(s) | 88, 659, 1411 |
| NspI | RCATGY | 2 cut(s) | 451, 1385 |
| PaeI | GCATGC | 1 cut(s) | 451 |
| PciI | ACATGT | 1 cut(s) | 1381 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 235 |
| PctI | GAATGC | 1 cut(s) | 328 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 929 |
| PkrI | GCNGC | 2 cut(s) | 472, 1343 |
| PleI | GAGTC | 5 cut(s) | 56, 158, 670, 736, 910 |
| PpsI | GAGTC | 5 cut(s) | 56, 158, 670, 736, 910 |
| PscI | ACATGT | 1 cut(s) | 1381 |
| PsiI | TTATAA | 2 cut(s) | 318, 611 |
| Psp124BI | GAGCTC | 1 cut(s) | 439 |
| Psp6I | CCWGG | 2 cut(s) | 1029, 1393 |
| PspEI | GGTNACC | 1 cut(s) | 1411 |
| PspGI | CCWGG | 2 cut(s) | 1029, 1393 |
| PspN4I | GGNNCC | 4 cut(s) | 183, 499, 921, 1243 |
| PspPI | GGNCC | 1 cut(s) | 1027 |
| PstI | CTGCAG | 1 cut(s) | 1391 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1505 |
| PsuI | RGATCY | 2 cut(s) | 497, 1241 |
| RsaI | GTAC | 6 cut(s) | 183, 380, 823, 1160, 1545, 1582 |
| RsaNI | GTAC | 6 cut(s) | 182, 379, 822, 1159, 1544, 1581 |
| RseI | CAYNNNNRTG | 3 cut(s) | 360, 519, 1098 |
| SacI | GAGCTC | 1 cut(s) | 439 |
| SaqAI | TTAA | 4 cut(s) | 81, 750, 774, 1521 |
| SatI | GCNGC | 2 cut(s) | 471, 1342 |
| Sau3AI | GATC | 6 cut(s) | 392, 497, 570, 1241, 1267, 1617 |
| Sau96I | GGNCC | 1 cut(s) | 1027 |
| SchI | GAGTC | 5 cut(s) | 56, 158, 670, 737, 911 |
| ScrFI | CCNGG | 2 cut(s) | 1031, 1395 |
| SduI | GDGCHC | 2 cut(s) | 49, 439 |
| SfaNI | GCATC | 1 cut(s) | 626 |
| SfcI | CTRYAG | 2 cut(s) | 671, 1387 |
| SinI | GGWCC | 1 cut(s) | 1027 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 360, 519, 1098 |
| SmlI | CTYRAG | 2 cut(s) | 176, 914 |
| SmoI | CTYRAG | 2 cut(s) | 176, 914 |
| SpeI | ACTAGT | 1 cut(s) | 1283 |
| SphI | GCATGC | 1 cut(s) | 451 |
| SsiI | CCGC | 1 cut(s) | 390 |
| SspMI | CTAG | 5 cut(s) | 287, 474, 1079, 1218, 1284 |
| SstI | GAGCTC | 1 cut(s) | 439 |
| StyD4I | CCNGG | 2 cut(s) | 1029, 1393 |
| StyI | CCWWGG | 2 cut(s) | 340, 1374 |
| TaaI | ACNGT | 4 cut(s) | 155, 542, 1459, 1472 |
| TaiI | ACGT | 2 cut(s) | 19, 46 |
| TaqI | TCGA | 6 cut(s) | 375, 643, 792, 1189, 1247, 1603 |
| TatI | WGTACW | 2 cut(s) | 821, 1543 |
| Tru1I | TTAA | 4 cut(s) | 81, 750, 774, 1521 |
| Tru9I | TTAA | 4 cut(s) | 81, 750, 774, 1521 |
| TscAI | CASTG | 5 cut(s) | 97, 730, 1100, 1462, 1477 |
| TseFI | GTSAC | 3 cut(s) | 88, 659, 1411 |
| TseI | GCWGC | 2 cut(s) | 470, 1341 |
| Tsp45I | GTSAC | 3 cut(s) | 88, 659, 1411 |
| TspDTI | ATGAA | 6 cut(s) | 525, 732, 1071, 1115, 1269, 1392 |
| TspRI | CASTG | 5 cut(s) | 97, 730, 1100, 1462, 1477 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 929 |
| VpaK11BI | GGWCC | 1 cut(s) | 1027 |
| XapI | RAATTY | 2 cut(s) | 487, 1422 |
| XceI | RCATGY | 2 cut(s) | 451, 1385 |
| XspI | CTAG | 5 cut(s) | 287, 474, 1079, 1218, 1284 |