B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1514 |
| AatII | GACGTC | 1 cut(s) | 798 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1028 |
| AciI | CCGC | 3 cut(s) | 113, 399, 962 |
| AclWI | GGATC | 4 cut(s) | 93, 480, 1305, 1378 |
| AcsI | RAATTY | 4 cut(s) | 185, 608, 1165, 1479 |
| AcyI | GRCGYC | 1 cut(s) | 795 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 179, 377, 1028 |
| AflII | CTTAAG | 1 cut(s) | 1013 |
| AgsI | TTSAA | 4 cut(s) | 428, 474, 817, 1398 |
| AjnI | CCWGG | 1 cut(s) | 1695 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 578, 610 |
| Alw26I | GTCTC | 1 cut(s) | 54 |
| AlwI | GGATC | 4 cut(s) | 93, 480, 1305, 1378 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 749, 1664 |
| AoxI | GGCC | 2 cut(s) | 810, 1497 |
| ApeKI | GCWGC | 2 cut(s) | 119, 968 |
| ApoI | RAATTY | 4 cut(s) | 185, 608, 1165, 1479 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 21, 53 |
| AspS9I | GGNCC | 4 cut(s) | 277, 401, 810, 825 |
| AsuHPI | GGTGA | 8 cut(s) | 204, 686, 803, 1053, 1601, 1685, 1718, 1738 |
| AsuNHI | GCTAGC | 1 cut(s) | 260 |
| AvaII | GGWCC | 3 cut(s) | 277, 401, 825 |
| BbsI | GAAGAC | 1 cut(s) | 1354 |
| BbvI | GCAGC | 2 cut(s) | 131, 980 |
| BccI | CCATC | 5 cut(s) | 89, 240, 713, 835, 1089 |
| BceAI | ACGGC | 2 cut(s) | 20, 869 |
| BciT130I | CCWGG | 1 cut(s) | 1697 |
| BcoDI | GTCTC | 1 cut(s) | 54 |
| BfaI | CTAG | 9 cut(s) | 261, 462, 671, 782, 800, 1124, 1283, 1386, 1721 |
| BfmI | CTRYAG | 3 cut(s) | 1189, 1287, 1574 |
| BfrI | CTTAAG | 1 cut(s) | 1013 |
| BglII | AGATCT | 2 cut(s) | 536, 934 |
| BisI | GCNGC | 2 cut(s) | 120, 969 |
| BlsI | GCNGC | 2 cut(s) | 121, 970 |
| Bme1390I | CCNGG | 1 cut(s) | 1697 |
| Bme18I | GGWCC | 3 cut(s) | 277, 401, 825 |
| BmgT120I | GGNCC | 4 cut(s) | 277, 401, 810, 825 |
| BmiI | GGNNCC | 3 cut(s) | 14, 171, 1020 |
| BmrFI | CCNGG | 1 cut(s) | 1697 |
| BmsI | GCATC | 1 cut(s) | 1194 |
| BmtI | GCTAGC | 1 cut(s) | 264 |
| BpiI | GAAGAC | 1 cut(s) | 1354 |
| BpmI | CTGGAG | 1 cut(s) | 885 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1338 |
| BpuEI | CTTGAG | 3 cut(s) | 85, 934, 1359 |
| BsaHI | GRCGYC | 1 cut(s) | 795 |
| BsaJI | CCNNGG | 3 cut(s) | 280, 1129, 1494 |
| BsaWI | WCCGGW | 1 cut(s) | 225 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 372, 378, 402, 408, 1227, 1257 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 179, 377, 1028 |
| Bse118I | RCCGGY | 2 cut(s) | 115, 964 |
| Bse1I | ACTGG | 1 cut(s) | 279 |
| BseBI | CCWGG | 1 cut(s) | 1697 |
| BseDI | CCNNGG | 3 cut(s) | 280, 1129, 1494 |
| BseGI | GGATG | 5 cut(s) | 234, 251, 575, 1100, 1204 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 179, 377, 1028 |
| BseMII | CTCAG | 2 cut(s) | 65, 1545 |
| BseNI | ACTGG | 1 cut(s) | 279 |
| BseRI | GAGGAG | 4 cut(s) | 59, 396, 399, 1248 |
| BseXI | GCAGC | 2 cut(s) | 131, 980 |
| BsgI | GTGCAG | 1 cut(s) | 1765 |
| BshFI | GGCC | 2 cut(s) | 812, 1499 |
| BsiSI | CCGG | 3 cut(s) | 116, 226, 965 |
| BslFI | GGGAC | 1 cut(s) | 362 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 179, 377, 1028 |
| BsmAI | GTCTC | 1 cut(s) | 54 |
| BsmFI | GGGAC | 1 cut(s) | 362 |
| BsmI | GAATGC | 1 cut(s) | 732 |
| BsnI | GGCC | 2 cut(s) | 812, 1499 |
| Bsp143I | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| BspACI | CCGC | 3 cut(s) | 113, 399, 962 |
| BspANI | GGCC | 2 cut(s) | 812, 1499 |
| BspCNI | CTCAG | 2 cut(s) | 64, 1544 |
| BspLI | GGNNCC | 3 cut(s) | 14, 171, 1020 |
| BspOI | GCTAGC | 1 cut(s) | 264 |
| BspPI | GGATC | 4 cut(s) | 93, 480, 1305, 1378 |
| BspTI | CTTAAG | 1 cut(s) | 1013 |
| BsrFI | RCCGGY | 2 cut(s) | 115, 964 |
| BsrI | ACTGG | 1 cut(s) | 279 |
| BssAI | RCCGGY | 2 cut(s) | 115, 964 |
| BssECI | CCNNGG | 3 cut(s) | 280, 1129, 1494 |
| BssMI | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| BssNI | GRCGYC | 1 cut(s) | 795 |
| BssT1I | CCWWGG | 3 cut(s) | 280, 1129, 1494 |
| Bst2UI | CCWGG | 1 cut(s) | 1697 |
| Bst4CI | ACNGT | 2 cut(s) | 691, 736 |
| Bst6I | CTCTTC | 3 cut(s) | 246, 780, 1095 |
| BstACI | GRCGYC | 1 cut(s) | 795 |
| BstAFI | CTTAAG | 1 cut(s) | 1013 |
| BstC8I | GCNNGC | 3 cut(s) | 117, 262, 966 |
| BstDEI | CTNAG | 3 cut(s) | 51, 1338, 1531 |
| BstF5I | GGATG | 5 cut(s) | 234, 251, 575, 1100, 1204 |
| BstKTI | GATC | 8 cut(s) | 88, 142, 488, 539, 937, 1313, 1373, 1412 |
| BstMAI | GTCTC | 1 cut(s) | 54 |
| BstMBI | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 818, 1158 |
| BstNI | CCWGG | 1 cut(s) | 1697 |
| BstNSI | RCATGY | 2 cut(s) | 320, 884 |
| BstSCI | CCNGG | 1 cut(s) | 1695 |
| BstSFI | CTRYAG | 3 cut(s) | 1189, 1287, 1574 |
| BstV1I | GCAGC | 2 cut(s) | 131, 980 |
| BstV2I | GAAGAC | 1 cut(s) | 1354 |
| BstX2I | RGATCY | 6 cut(s) | 85, 485, 536, 934, 1310, 1370 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1495 |
| BstYI | RGATCY | 6 cut(s) | 85, 485, 536, 934, 1310, 1370 |
| BsuRI | GGCC | 2 cut(s) | 812, 1499 |
| BtsCI | GGATG | 5 cut(s) | 234, 251, 575, 1100, 1204 |
| BtsIMutI | CAGTG | 2 cut(s) | 701, 1616 |
| Cac8I | GCNNGC | 3 cut(s) | 117, 262, 966 |
| CaiI | CAGNNNCTG | 2 cut(s) | 749, 1664 |
| Cfr10I | RCCGGY | 2 cut(s) | 115, 964 |
| Cfr13I | GGNCC | 4 cut(s) | 277, 401, 810, 825 |
| CseI | GACGC | 1 cut(s) | 1579 |
| CviAII | CATG | 4 cut(s) | 317, 549, 881, 1138 |
| DdeI | CTNAG | 3 cut(s) | 51, 1338, 1531 |
| DpnI | GATC | 8 cut(s) | 87, 141, 487, 538, 936, 1312, 1372, 1411 |
| DpnII | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| Eam1104I | CTCTTC | 3 cut(s) | 246, 780, 1095 |
| EarI | CTCTTC | 3 cut(s) | 246, 780, 1095 |
| EciI | GGCGGA | 2 cut(s) | 102, 951 |
| Eco130I | CCWWGG | 3 cut(s) | 280, 1129, 1494 |
| Eco32I | GATATC | 1 cut(s) | 1474 |
| Eco47I | GGWCC | 3 cut(s) | 277, 401, 825 |
| EcoO109I | RGGNCCY | 1 cut(s) | 810 |
| EcoRI | GAATTC | 1 cut(s) | 1479 |
| EcoRII | CCWGG | 1 cut(s) | 1695 |
| EcoRV | GATATC | 1 cut(s) | 1474 |
| EcoT14I | CCWWGG | 3 cut(s) | 280, 1129, 1494 |
| ErhI | CCWWGG | 3 cut(s) | 280, 1129, 1494 |
| FaeI | CATG | 4 cut(s) | 320, 552, 884, 1141 |
| FaqI | GGGAC | 1 cut(s) | 362 |
| FatI | CATG | 4 cut(s) | 316, 548, 880, 1137 |
| Fnu4HI | GCNGC | 2 cut(s) | 120, 969 |
| FokI | GGATG | 5 cut(s) | 241, 258, 562, 1107, 1211 |
| Fsp4HI | GCNGC | 2 cut(s) | 120, 969 |
| FspBI | CTAG | 9 cut(s) | 261, 462, 671, 782, 800, 1124, 1283, 1386, 1721 |
| GluI | GCNGC | 2 cut(s) | 120, 969 |
| GsuI | CTGGAG | 1 cut(s) | 885 |
| HaeIII | GGCC | 2 cut(s) | 812, 1499 |
| HapII | CCGG | 3 cut(s) | 116, 226, 965 |
| HgaI | GACGC | 1 cut(s) | 1579 |
| Hin1I | GRCGYC | 1 cut(s) | 795 |
| Hin1II | CATG | 4 cut(s) | 320, 552, 884, 1141 |
| HindIII | AAGCTT | 2 cut(s) | 819, 1521 |
| HinfI | GANTC | 3 cut(s) | 47, 70, 76 |
| HpaII | CCGG | 3 cut(s) | 116, 226, 965 |
| HphI | GGTGA | 8 cut(s) | 204, 686, 803, 1053, 1601, 1685, 1718, 1738 |
| Hpy99I | CGWCG | 2 cut(s) | 222, 1071 |
| HpyCH4III | ACNGT | 2 cut(s) | 691, 736 |
| HpyCH4IV | ACGT | 3 cut(s) | 795, 1327, 1738 |
| HpyCH4V | TGCA | 2 cut(s) | 699, 1746 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 818, 1158 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 1338, 1531 |
| HpySE526I | ACGT | 3 cut(s) | 795, 1327, 1738 |
| Hsp92I | GRCGYC | 1 cut(s) | 795 |
| Hsp92II | CATG | 4 cut(s) | 320, 552, 884, 1141 |
| KroI | GCCGGC | 2 cut(s) | 115, 964 |
| KroNI | GCCGGC | 2 cut(s) | 117, 966 |
| Kzo9I | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| LmnI | GCTCC | 4 cut(s) | 746, 860, 1235, 1271 |
| Lsp1109I | GCAGC | 2 cut(s) | 131, 980 |
| LweI | GCATC | 1 cut(s) | 1194 |
| MaeI | CTAG | 9 cut(s) | 261, 462, 671, 782, 800, 1124, 1283, 1386, 1721 |
| MaeII | ACGT | 3 cut(s) | 795, 1327, 1738 |
| MalI | GATC | 8 cut(s) | 87, 141, 487, 538, 936, 1312, 1372, 1411 |
| MboI | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| MfeI | CAATTG | 1 cut(s) | 175 |
| MflI | RGATCY | 6 cut(s) | 85, 485, 536, 934, 1310, 1370 |
| MlyI | GAGTC | 2 cut(s) | 56, 85 |
| MmeI | TCCRAC | 4 cut(s) | 597, 734, 1434, 1649 |
| MroNI | GCCGGC | 2 cut(s) | 115, 964 |
| MseI | TTAA | 3 cut(s) | 555, 581, 1014 |
| MslI | CAYNNNNRTG | 2 cut(s) | 507, 1431 |
| MspA1I | CMGCKG | 3 cut(s) | 122, 399, 971 |
| MspCI | CTTAAG | 1 cut(s) | 1013 |
| MspI | CCGG | 3 cut(s) | 116, 226, 965 |
| MspR9I | CCNGG | 1 cut(s) | 1697 |
| MunI | CAATTG | 1 cut(s) | 175 |
| Mva1269I | GAATGC | 1 cut(s) | 732 |
| MvaI | CCWGG | 1 cut(s) | 1697 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 818, 1158 |
| NaeI | GCCGGC | 2 cut(s) | 117, 966 |
| NdeII | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| NgoMIV | GCCGGC | 2 cut(s) | 115, 964 |
| NheI | GCTAGC | 1 cut(s) | 260 |
| NlaIII | CATG | 4 cut(s) | 320, 552, 884, 1141 |
| NlaIV | GGNNCC | 3 cut(s) | 14, 171, 1020 |
| NmuCI | GTSAC | 7 cut(s) | 221, 647, 674, 791, 1070, 1562, 1589 |
| NspI | RCATGY | 2 cut(s) | 320, 884 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1072 |
| PctI | GAATGC | 1 cut(s) | 732 |
| PdiI | GCCGGC | 2 cut(s) | 117, 966 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1028 |
| PkrI | GCNGC | 2 cut(s) | 121, 970 |
| PleI | GAGTC | 2 cut(s) | 55, 84 |
| PpsI | GAGTC | 2 cut(s) | 55, 84 |
| PsiI | TTATAA | 1 cut(s) | 1514 |
| Psp6I | CCWGG | 1 cut(s) | 1695 |
| PspGI | CCWGG | 1 cut(s) | 1695 |
| PspN4I | GGNNCC | 3 cut(s) | 14, 171, 1020 |
| PspPI | GGNCC | 4 cut(s) | 277, 401, 810, 825 |
| PstNI | CAGNNNCTG | 2 cut(s) | 749, 1664 |
| PsuI | RGATCY | 6 cut(s) | 85, 485, 536, 934, 1310, 1370 |
| PvuII | CAGCTG | 2 cut(s) | 122, 971 |
| RseI | CAYNNNNRTG | 2 cut(s) | 507, 1431 |
| SaqAI | TTAA | 3 cut(s) | 555, 581, 1014 |
| SatI | GCNGC | 2 cut(s) | 120, 969 |
| Sau3AI | GATC | 8 cut(s) | 85, 139, 485, 536, 934, 1310, 1370, 1409 |
| Sau96I | GGNCC | 4 cut(s) | 277, 401, 810, 825 |
| SchI | GAGTC | 2 cut(s) | 56, 85 |
| ScrFI | CCNGG | 1 cut(s) | 1697 |
| SfaNI | GCATC | 1 cut(s) | 1194 |
| SfcI | CTRYAG | 3 cut(s) | 1189, 1287, 1574 |
| SinI | GGWCC | 3 cut(s) | 277, 401, 825 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 507, 1431 |
| SmlI | CTYRAG | 4 cut(s) | 64, 913, 1013, 1374 |
| SmoI | CTYRAG | 4 cut(s) | 64, 913, 1013, 1374 |
| SsiI | CCGC | 3 cut(s) | 113, 399, 962 |
| SspMI | CTAG | 9 cut(s) | 261, 462, 671, 782, 800, 1124, 1283, 1386, 1721 |
| StyD4I | CCNGG | 1 cut(s) | 1695 |
| StyI | CCWWGG | 3 cut(s) | 280, 1129, 1494 |
| TaaI | ACNGT | 2 cut(s) | 691, 736 |
| TaiI | ACGT | 3 cut(s) | 798, 1330, 1741 |
| TaqI | TCGA | 1 cut(s) | 1754 |
| TaqII | GACCGA | 1 cut(s) | 1089 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| Tru1I | TTAA | 3 cut(s) | 555, 581, 1014 |
| Tru9I | TTAA | 3 cut(s) | 555, 581, 1014 |
| TscAI | CASTG | 2 cut(s) | 701, 1616 |
| TseFI | GTSAC | 7 cut(s) | 221, 647, 674, 791, 1070, 1562, 1589 |
| TseI | GCWGC | 2 cut(s) | 119, 968 |
| Tsp45I | GTSAC | 7 cut(s) | 221, 647, 674, 791, 1070, 1562, 1589 |
| TspDTI | ATGAA | 6 cut(s) | 327, 513, 586, 1338, 1437, 1608 |
| TspGWI | ACGGA | 1 cut(s) | 1650 |
| TspRI | CASTG | 2 cut(s) | 701, 1616 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1028 |
| Vha464I | CTTAAG | 1 cut(s) | 1013 |
| VpaK11BI | GGWCC | 3 cut(s) | 277, 401, 825 |
| XapI | RAATTY | 4 cut(s) | 185, 608, 1165, 1479 |
| XbaI | TCTAGA | 1 cut(s) | 781 |
| XceI | RCATGY | 2 cut(s) | 320, 884 |
| XspI | CTAG | 9 cut(s) | 261, 462, 671, 782, 800, 1124, 1283, 1386, 1721 |
| ZraI | GACGTC | 1 cut(s) | 796 |